AT5G61810

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24831574 .. 24833984
2411 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61810.1

Sequence Viewer

Length: 1437 bp
ATGGAGGCAGAGAAATCCAAGCAAAATCCGGGTAAGAAGCCCGTAGAAGCAACAATGGAGCACGTGTTGGTGGCATTACGAGAGACCAAGGAGAAGAGAGAGATCAGGATTCAAAAACTGTTCGAATTCTTCGACAATTCGAAGTTAGGGTTCTTAGACGATACCCAGATCGAGAAAGGTTTGTCTTCGCTTAGTATTCCTCCAAAGTATAGGTACGCTAGTGATTTTCTTAAAGTCTGCGACTCGAATCGAGATGGGCGTGTGGACTACCAGGAGTTTCGTCGTTACATGGATGCTAAAGAGCTTGAGTTGTACAAGATTTTTCAGGCCATTGATATTGAACACAATGGCGACATTTGTCCAGCGGAGCTTTGGGAGGCTCTTGATAAAGCTGGCATTAAAATCAAAGATGAGGAACTTGCTTCTTTTATGGAGCATGTTGATAAGGACAACAACGGAATTATAACTTTTGAGGAGTGGAGGGATTTTCTTTTGCTAAACCCTCATGAAGCTACAATTGAGAACATTTATCATCACTGGGAAAGAGTATGCTTAATAGACATTGGAGAGCAAGCTGTTATACCAGATGGTATAAGTGCACACGCTCAAAGAAGCAAATTACTTCTCGCGGGAGGAATAGCAGGGGCTGTTTCTAGAACCGCAACTGCGCCTCTGGACCGTCTGAAAGTTGCTCTGCAAGTTCAACGGACAAATTTGGGTGTTGTCCCGACCATTAAGAAAATATGGAGAGAAGATAAGTTGTTGGGTTTCTTCAGAGGTAATGGGTTAAATGTAGCGAAAGTCGCTCCTGAAAGCGCTATAAAGTTTGCTGCTTATGAAATGCTGAAACCAATAATTGGGGGAGCGGATGGTGACATTGGTACAAGCGGGAGGCTTTTGGCTGGTGGATTGGCTGGTGCAGTGGCTCAAACAGCTATTTATCCTATGGATCTCGTGAAGACTCGGTTACAGACTTTTGTGAGTGAAGTTGGGACACCAAAGCTGTGGAAACTCACAAAGGATATTTGGATTCAAGAAGGACCCCGAGCTTTTTACAGGGGTCTTTGTCCTTCTCTAATTGGGATTATCCCTTACGCAGGAATTGACCTTGCTGCTTACGAAACTCTTAAAGACTTATCAAGGGCACATTTTCTTCATGACACTGCGGAGCCAGGTCCTTTGATACAACTGGGATGTGGAATGACTTCTGGAGCTCTTGGAGCATCGTGTGTTTACCCATTACAGGTCATAAGAACAAGAATGCAAGCTGATAGCTCAAAAACAAGCATGGGCCAAGAGTTTCTGAAAACGCTAAGAGGCGAAGGTCTAAAAGGTTTTTACAGAGGAATCTTCCCCAACTTCTTCAAAGTCATTCCTTCCGCAAGCATTTCGTACCTTGTCTACGAAGCTATGAAGAAAAATCTTGCCCTTGATTAA

Protein Analysis

478

Amino Acids

53.27

Weight (kDa)

6.78

Isoelectric Point (pI)

21.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 36 - 97 2.4e-06 EF-hand domain pair
EF-hand_7 PF13499 103 - 159 3.8e-09 EF-hand domain pair
Mito_carr PF00153 206 - 286 4.5e-22 Mitochondrial carrier protein
Mito_carr PF00153 296 - 380 2.5e-24 Mitochondrial carrier protein
Mito_carr PF00153 393 - 475 5.3e-21 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 464
AccB7I CCANNNNNTGG 1 cut(s) 857
AccBSI CCGCTC 1 cut(s) 866
AccI GTMKAC 1 cut(s) 1401
AccII CGCG 1 cut(s) 629
AciI CCGC 7 cut(s) 365, 629, 660, 866, 888, 1166, 1380
AclWI GGATC 1 cut(s) 957
AcsI RAATTY 2 cut(s) 125, 712
AcuI CTGAAG 1 cut(s) 757
AcvI CACGTG 1 cut(s) 64
AfaI GTAC 4 cut(s) 215, 314, 883, 1394
AfeI AGCGCT 1 cut(s) 817
AfiI CCNNNNNNNGG 3 cut(s) 857, 1097, 1243
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 5 cut(s) 113, 341, 704, 1034, 1366
AjnI CCWGG 2 cut(s) 270, 1171
Alw21I GWGCWC 3 cut(s) 63, 601, 1216
Alw26I GTCTC 1 cut(s) 77
Alw44I GTGCAC 1 cut(s) 597
AlwI GGATC 1 cut(s) 957
AlwNI CAGNNNCTG 1 cut(s) 647
Ama87I CYCGRG 1 cut(s) 1044
Aor51HI AGCGCT 1 cut(s) 817
AoxI GGCC 2 cut(s) 327, 1291
ApaLI GTGCAC 1 cut(s) 597
ApeKI GCWGC 2 cut(s) 830, 1112
ApoI RAATTY 2 cut(s) 125, 712
Asp700I GAANNNNTTC 1 cut(s) 1204
AspLEI GCGC 2 cut(s) 670, 818
AspS9I GGNCC 4 cut(s) 676, 1040, 1175, 1291
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 1 cut(s) 884
AsuII TTCGAA 2 cut(s) 123, 140
AvaI CYCGRG 1 cut(s) 1044
AvaII GGWCC 3 cut(s) 676, 1040, 1175
BaeGI GKGCMC 2 cut(s) 601, 1147
BaeI ACNNNNGTAYC 2 cut(s) 205, 238
BanII GRGCYC 1 cut(s) 1216
BauI CACGAG 1 cut(s) 953
BbrPI CACGTG 1 cut(s) 64
BbsI GAAGAC 2 cut(s) 177, 965
Bbv12I GWGCWC 3 cut(s) 63, 601, 1216
BbvI GCAGC 2 cut(s) 817, 1099
BccI CCATC 3 cut(s) 248, 581, 863
BcgI CGANNNNNNTGC 2 cut(s) 1371, 1405
BciT130I CCWGG 2 cut(s) 272, 1173
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 2 cut(s) 219, 654
BfoI RGCGCY 1 cut(s) 819
BisI GCNGC 2 cut(s) 831, 1113
BlsI GCNGC 2 cut(s) 832, 1114
Bme1390I CCNGG 3 cut(s) 30, 272, 1173
Bme18I GGWCC 3 cut(s) 676, 1040, 1175
BmeT110I CYCGRG 1 cut(s) 1044
BmgT120I GGNCC 4 cut(s) 676, 1040, 1175, 1291
BmiI GGNNCC 2 cut(s) 1042, 1170
BmrFI CCNGG 3 cut(s) 30, 272, 1173
BmrI ACTGGG 2 cut(s) 547, 1199
BmsI GCATC 2 cut(s) 283, 1232
BmuI ACTGGG 2 cut(s) 547, 1199
BoxI GACNNNNGTC 1 cut(s) 357
BpiI GAAGAC 2 cut(s) 177, 965
BpmI CTGGAG 1 cut(s) 1230
Bpu14I TTCGAA 2 cut(s) 123, 140
BpuEI CTTGAG 1 cut(s) 326
BpuMI CCSGG 1 cut(s) 30
BsaAI YACGTR 1 cut(s) 64
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 1 cut(s) 87
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bsc4I CCNNNNNNNGG 3 cut(s) 857, 1097, 1243
Bse1I ACTGG 2 cut(s) 542, 1194
BseBI CCWGG 2 cut(s) 272, 1173
BseDI CCNNGG 1 cut(s) 87
BseGI GGATG 3 cut(s) 298, 874, 1199
BseLI CCNNNNNNNGG 3 cut(s) 857, 1097, 1243
BseNI ACTGG 2 cut(s) 542, 1194
BseRI GAGGAG 1 cut(s) 488
BseSI GKGCMC 2 cut(s) 601, 1147
BseXI GCAGC 2 cut(s) 817, 1099
BsgI GTGCAG 1 cut(s) 939
Bsh1236I CGCG 1 cut(s) 629
BshFI GGCC 2 cut(s) 329, 1293
BsiHKAI GWGCWC 3 cut(s) 63, 601, 1216
BsiHKCI CYCGRG 1 cut(s) 1044
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 2 cut(s) 710, 1006
BslI CCNNNNNNNGG 3 cut(s) 857, 1097, 1243
BsmAI GTCTC 1 cut(s) 77
BsmFI GGGAC 2 cut(s) 710, 1006
BsmI GAATGC 1 cut(s) 1266
BsnI GGCC 2 cut(s) 329, 1293
Bso31I GGTCTC 1 cut(s) 77
BsoBI CYCGRG 1 cut(s) 1044
Bsp119I TTCGAA 2 cut(s) 123, 140
Bsp1286I GDGCHC 4 cut(s) 63, 601, 1147, 1216
Bsp1407I TGTACA 1 cut(s) 312
Bsp143I GATC 3 cut(s) 102, 168, 949
BspACI CCGC 7 cut(s) 365, 629, 660, 866, 888, 1166, 1380
BspANI GGCC 2 cut(s) 329, 1293
BspFNI CGCG 1 cut(s) 629
BspHI TCATGA 2 cut(s) 505, 1156
BspLI GGNNCC 2 cut(s) 1042, 1170
BspPI GGATC 1 cut(s) 957
BspT104I TTCGAA 2 cut(s) 123, 140
BspTNI GGTCTC 1 cut(s) 77
BsrBI CCGCTC 1 cut(s) 866
BsrGI TGTACA 1 cut(s) 312
BsrI ACTGG 2 cut(s) 542, 1194
BssECI CCNNGG 1 cut(s) 87
BssMI GATC 3 cut(s) 102, 168, 949
BssSI CACGAG 1 cut(s) 953
BssT1I CCWWGG 1 cut(s) 87
Bst2BI CACGAG 1 cut(s) 953
Bst2UI CCWGG 2 cut(s) 272, 1173
Bst4CI ACNGT 2 cut(s) 120, 680
Bst6I CTCTTC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 312
BstBAI YACGTR 1 cut(s) 64
BstBI TTCGAA 2 cut(s) 123, 140
BstC8I GCNNGC 4 cut(s) 394, 573, 1266, 1384
BstDEI CTNAG 3 cut(s) 154, 191, 1313
BstENI CCTNNNNNAGG 1 cut(s) 1095
BstF5I GGATG 3 cut(s) 298, 874, 1199
BstFNI CGCG 1 cut(s) 629
BstH2I RGCGCY 1 cut(s) 819
BstHHI GCGC 2 cut(s) 670, 818
BstKTI GATC 3 cut(s) 105, 171, 952
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 3 cut(s) 102, 168, 949
BstMWI GCNNNNNNNGC 3 cut(s) 803, 932, 1220
BstNI CCWGG 2 cut(s) 272, 1173
BstNSI RCATGY 1 cut(s) 440
BstPAI GACNNNNGTC 1 cut(s) 357
BstSCI CCNGG 3 cut(s) 28, 270, 1171
BstSLI GKGCMC 2 cut(s) 601, 1147
BstUI CGCG 1 cut(s) 629
BstV1I GCAGC 2 cut(s) 817, 1099
BstV2I GAAGAC 2 cut(s) 177, 965
BstX2I RGATCY 1 cut(s) 949
BstXI CCANNNNNNTGG 1 cut(s) 1005
BstYI RGATCY 1 cut(s) 949
BsuRI GGCC 2 cut(s) 329, 1293
BtsCI GGATG 3 cut(s) 298, 874, 1199
BtsI GCAGTG 2 cut(s) 927, 1161
BtsIMutI CAGTG 3 cut(s) 535, 927, 1161
Cac8I GCNNGC 4 cut(s) 394, 573, 1266, 1384
CaiI CAGNNNCTG 1 cut(s) 647
CciI TCATGA 2 cut(s) 505, 1156
CfoI GCGC 2 cut(s) 670, 818
Cfr13I GGNCC 4 cut(s) 676, 1040, 1175, 1291
Csp6I GTAC 4 cut(s) 214, 313, 882, 1393
CviAII CATG 5 cut(s) 289, 437, 506, 1157, 1288
CviQI GTAC 4 cut(s) 214, 313, 882, 1393
DdeI CTNAG 3 cut(s) 154, 191, 1313
DpnI GATC 3 cut(s) 104, 170, 951
DpnII GATC 3 cut(s) 102, 168, 949
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Ecl136II GAGCTC 1 cut(s) 1214
Eco130I CCWWGG 1 cut(s) 87
Eco24I GRGCYC 1 cut(s) 1216
Eco31I GGTCTC 1 cut(s) 77
Eco47I GGWCC 3 cut(s) 676, 1040, 1175
Eco47III AGCGCT 1 cut(s) 817
Eco53kI GAGCTC 1 cut(s) 1214
Eco57I CTGAAG 1 cut(s) 757
Eco72I CACGTG 1 cut(s) 64
Eco88I CYCGRG 1 cut(s) 1044
EcoICRI GAGCTC 1 cut(s) 1214
EcoNI CCTNNNNNAGG 1 cut(s) 1095
EcoO109I RGGNCCY 2 cut(s) 1040, 1175
EcoRI GAATTC 1 cut(s) 125
EcoRII CCWGG 2 cut(s) 270, 1171
EcoT14I CCWWGG 1 cut(s) 87
EcoT38I GRGCYC 1 cut(s) 1216
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 5 cut(s) 292, 440, 509, 1160, 1291
FaqI GGGAC 2 cut(s) 710, 1006
FatI CATG 5 cut(s) 288, 436, 505, 1156, 1287
FauI CCCGC 2 cut(s) 622, 881
FblI GTMKAC 1 cut(s) 1401
Fnu4HI GCNGC 2 cut(s) 831, 1113
FokI GGATG 3 cut(s) 305, 881, 1206
FriOI GRGCYC 1 cut(s) 1216
Fsp4HI GCNGC 2 cut(s) 831, 1113
FspBI CTAG 2 cut(s) 219, 654
GlaI GCGC 2 cut(s) 669, 817
GluI GCNGC 2 cut(s) 831, 1113
GsuI CTGGAG 1 cut(s) 1230
HaeII RGCGCY 1 cut(s) 819
HaeIII GGCC 2 cut(s) 329, 1293
HapII CCGG 1 cut(s) 29
HhaI GCGC 2 cut(s) 670, 818
Hin1II CATG 5 cut(s) 292, 440, 509, 1160, 1291
Hin6I GCGC 2 cut(s) 668, 816
HinP1I GCGC 2 cut(s) 668, 816
HinfI GANTC 6 cut(s) 109, 242, 247, 961, 1030, 1347
HpaII CCGG 1 cut(s) 29
HphI GGTGA 1 cut(s) 884
Hpy166II GTNNAC 4 cut(s) 265, 599, 1234, 1402
Hpy188I TCNGA 3 cut(s) 684, 776, 1305
Hpy8I GTNNAC 4 cut(s) 265, 599, 1234, 1402
Hpy99I CGWCG 1 cut(s) 285
HpyAV CCTTC 4 cut(s) 1031, 1080, 1316, 1386
HpyCH4III ACNGT 2 cut(s) 120, 680
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 4 cut(s) 599, 697, 920, 1264
HpyF10VI GCNNNNNNNGC 3 cut(s) 803, 932, 1220
HpyF3I CTNAG 3 cut(s) 154, 191, 1313
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 5 cut(s) 292, 440, 509, 1160, 1291
HspAI GCGC 2 cut(s) 668, 816
Kzo9I GATC 3 cut(s) 102, 168, 949
LmnI GCTCC 8 cut(s) 58, 367, 433, 811, 863, 1168, 1211, 1220
Lsp1109I GCAGC 2 cut(s) 817, 1099
LweI GCATC 2 cut(s) 283, 1232
MaeI CTAG 2 cut(s) 219, 654
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 3 cut(s) 284, 872, 966
MalI GATC 3 cut(s) 104, 170, 951
MbiI CCGCTC 1 cut(s) 866
MboI GATC 3 cut(s) 102, 168, 949
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 1 cut(s) 949
MhlI GDGCHC 4 cut(s) 63, 601, 1147, 1216
MluCI AATT 9 cut(s) 125, 136, 459, 516, 617, 712, 855, 1077, 1101
MlyI GAGTC 2 cut(s) 236, 955
MroXI GAANNNNTTC 1 cut(s) 1204
MseI TTAA 7 cut(s) 231, 399, 554, 735, 788, 1128, 1435
MspA1I CMGCKG 1 cut(s) 365
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 3 cut(s) 30, 272, 1173
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 1 cut(s) 1266
MvaI CCWGG 2 cut(s) 272, 1173
MvnI CGCG 1 cut(s) 629
MwoI GCNNNNNNNGC 3 cut(s) 803, 932, 1220
NciI CCSGG 1 cut(s) 30
NdeII GATC 3 cut(s) 102, 168, 949
NlaIII CATG 5 cut(s) 292, 440, 509, 1160, 1291
NlaIV GGNNCC 2 cut(s) 1042, 1170
NmuCI GTSAC 1 cut(s) 872
NspI RCATGY 1 cut(s) 440
NspV TTCGAA 2 cut(s) 123, 140
PagI TCATGA 2 cut(s) 505, 1156
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 256
PctI GAATGC 1 cut(s) 1266
PdmI GAANNNNTTC 1 cut(s) 1204
PfeI GAWTC 4 cut(s) 109, 247, 1030, 1347
PflMI CCANNNNNTGG 1 cut(s) 857
PkrI GCNGC 2 cut(s) 832, 1114
PleI GAGTC 2 cut(s) 236, 955
PmaCI CACGTG 1 cut(s) 64
PmlI CACGTG 1 cut(s) 64
PpsI GAGTC 2 cut(s) 236, 955
Ppu21I YACGTR 1 cut(s) 64
PpuMI RGGWCCY 2 cut(s) 1040, 1175
PshAI GACNNNNGTC 1 cut(s) 357
PsiI TTATAA 1 cut(s) 464
Psp124BI GAGCTC 1 cut(s) 1216
Psp5II RGGWCCY 2 cut(s) 1040, 1175
Psp6I CCWGG 2 cut(s) 270, 1171
PspCI CACGTG 1 cut(s) 64
PspGI CCWGG 2 cut(s) 270, 1171
PspN4I GGNNCC 2 cut(s) 1042, 1170
PspPI GGNCC 4 cut(s) 676, 1040, 1175, 1291
PspPPI RGGWCCY 2 cut(s) 1040, 1175
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 1 cut(s) 949
RsaI GTAC 4 cut(s) 215, 314, 883, 1394
RsaNI GTAC 4 cut(s) 214, 313, 882, 1393
SacI GAGCTC 1 cut(s) 1216
SaqAI TTAA 7 cut(s) 231, 399, 554, 735, 788, 1128, 1435
SatI GCNGC 2 cut(s) 831, 1113
Sau3AI GATC 3 cut(s) 102, 168, 949
Sau96I GGNCC 4 cut(s) 676, 1040, 1175, 1291
SchI GAGTC 2 cut(s) 236, 955
ScrFI CCNGG 3 cut(s) 30, 272, 1173
SduI GDGCHC 4 cut(s) 63, 601, 1147, 1216
SfaNI GCATC 2 cut(s) 283, 1232
SfuI TTCGAA 2 cut(s) 123, 140
SinI GGWCC 3 cut(s) 676, 1040, 1175
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
Sse9I AATT 9 cut(s) 125, 136, 459, 516, 617, 712, 855, 1077, 1101
SsiI CCGC 7 cut(s) 365, 629, 660, 866, 888, 1166, 1380
SspMI CTAG 2 cut(s) 219, 654
SstI GAGCTC 1 cut(s) 1216
StyD4I CCNGG 3 cut(s) 28, 270, 1171
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 2 cut(s) 120, 680
TaiI ACGT 1 cut(s) 66
TaqI TCGA 6 cut(s) 123, 132, 140, 171, 245, 250
TasI AATT 9 cut(s) 125, 136, 459, 516, 617, 712, 855, 1077, 1101
TatI WGTACW 1 cut(s) 312
TfiI GAWTC 4 cut(s) 109, 247, 1030, 1347
Tru1I TTAA 7 cut(s) 231, 399, 554, 735, 788, 1128, 1435
Tru9I TTAA 7 cut(s) 231, 399, 554, 735, 788, 1128, 1435
TscAI CASTG 3 cut(s) 542, 927, 1168
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 2 cut(s) 830, 1112
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 4 cut(s) 522, 852, 1145, 1427
TspGWI ACGGA 2 cut(s) 471, 721
TspRI CASTG 3 cut(s) 542, 927, 1168
Van91I CCANNNNNTGG 1 cut(s) 857
VneI GTGCAC 1 cut(s) 597
VpaK11BI GGWCC 3 cut(s) 676, 1040, 1175
XagI CCTNNNNNAGG 1 cut(s) 1095
XapI RAATTY 2 cut(s) 125, 712
XbaI TCTAGA 1 cut(s) 653
XceI RCATGY 1 cut(s) 440
XcmI CCANNNNNNNNNTGG 1 cut(s) 369
XmiI GTMKAC 1 cut(s) 1401
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 2 cut(s) 219, 654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.