Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Reverse (-)

20848794 .. 20852384

Gene Structure 3591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G51300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGAGTCCGTCGAAATGAACAATCCCAATTCGCAAACCCTAGATCAACCTCCTCCTTCCTCCAACGGAGACACTGCTCCACTCGCATTGGATCATATGAATCCTCAGAATTCGGAGTCTGTGGCTTTAAACGGTTCTTCTACTCCTATCCCCGATACTAATGGTTCATCAGCAAAGCCTGAGCTCTTACGTCCTTTGCTATCGGAGAACGGTGTTAGCAAGACGCTGAGTGGTAACGATAAGGATCAGTCTGGTGGAGAGGAAGAGACTACAAGCCGGAGGAAGCGTCGGAGTCGGTGGGATCCTCCGCCTTCTGAGTCCATTAATAACCCTAGCGCCGAAGGGGGTACTGATTCCGGTACTGGGACTAGGAAGCGTAAGTCGAGATGGGCAGATGATGAGCCGAGGACGCAAATTCAGTTACCTGACTTCATGAAGGATTTCACTGGAGGTATTGAGTTTGATCCTGAGATTCAAGCTTTGAATAGTAGGTTACTTGAGATTAGTAGGATGTTGCAGTCTGGTATGCCTTTGGATGATAGACCAGAAGGACAGAGGTCTCCTTCACCAGAGCCTGTGTATGATAACATGGGAATTAGGATCAACACTAGGGAGTATCGAGCGAGGGAGAGGTTGAATAGAGAAAGACAAGAAATTATTGCTCAGATTATCAAGAAGAATCCTGCTTTTAAACCTCCGGCAGATTATAGACCTCCTAAGCTCCATAAGAAGCTTTTCATTCCAATGAAGGAGTTTCCTGGTTACAATTTTATTGGTCTGATTATTGGTCCCAGGGGTAATACTCAGAAGAGAATGGAGAGGGAGACTGGTGCAAAAATTGTAATTCGGGGTAAAGGGTCTGTAAAAGAAGGTAGGCATCAGCAGAAAAAGGATTTGAAATATGACCCTTCTGAGAATGAAGACTTGCATGTTTTAGTCGAGGCTGAGACTCAGGAAGCTCTTGAAGCTGCTGCTGGTATGGTTGAAAAGCTATTGCAACCTGTTGATGAAGTGCTCAACGAGCACAAGAGGCAACAGCTCAGGGAACTTGCAACCTTGAATGGGACAATAAGGGATGAAGAATTCTGTAGACTGTGTGGTGAGCCAGGACATAGACAGTATGCATGTCCTTCTCGTACGAATACCTTTAAGAGTGATGTTCTTTGCAAGATCTGTGGTGATGGTGGACACCCTACTATTGATTGCCCGGTGAAGGGTACTACTGGGAAGAAAATGGATGATGAATATCAGAACTTCTTGGCAGAGTTAGGAGGAACTGTACCTGAATCTTCTCTCAAACAGAGTGCTACCTTAGCTCTTGGTCCGGGAAGTTCGGGAAGTAATCCTCCATGGGCTAATAATGCAGGGAATGGTGCAAGTGCGCATCCTGGCTTAGGGTCAACTCCGACTAAACCCCCCTCCAAAGAATATGACGAAACAAATTTGTACATTGGGTTCTTACCTCCGATGCTGGAGGACGATGGTTTGATTAATCTCTTTTCATCCTTTGGTGAAATTGTGATGGCAAAGGTAATCAAGGACCGTGTGACTGGGCTGAGCAAAGGCTATGGTTTTGTGAAGTACGCTGATGTACAGATGGCTAATACTGCTGTTCAGGCAATGAATGGCTATCGTTTCGAAGGCCGAACACTCGCTGTCAGGATTGCAGGCAAATCGCCACCGCCTATTGCACCTCCAGGACCTCCAGCTCCTCAACCACCAACTCAAGGTTATCCTCCCTCAAACCAGCCGCCTGGTGCCTATCCATCTCAACAGTATGCCACTGGTGGTTATTCAACAGCTCCAGTTCCTTGGGGTCCTCCTGTTCCTTCCTATTCTCCATATGCTCTTCCCCCTCCTCCTCCTGGTTCTTACCATCCTGTCCATGGTCAACATATGCCTCCTTATGGAATGCAATACCCACCACCACCACCTCATGTGACACAAGCACCTCCACCTGGCACTACTCAAAACCCATCTTCTAGTGAACCCCAGCAAAGCTTCCCACCAGGAGTACAAGCTGATAGTGGTGCTGCTACGTCGTCTATACCACCAAATGTCTATGGTAGCTCAGTCACGGCTATGCCTGGACAGCCTCCATATATGAGTTATCCGTCTTACTACAATGCTGTTCCCCCTCCAACACCTCCTGCACCGGCCTCGTCTACTGATCATTCCCAAAACATGGGTAACATGCCATGGGCCAACAATCCTTCTGTCTCAACACCTGATCACTCACAAGGTCTTGTTAATGCACCTTGGGCACCTAATCCTCCTATGCCACCCACTGTTGGCTATTCACAGAGCATGGGGAACGTACCCTGGGCTCCCAAACCTCCAGTACAGCCTCCTGCAGAGAATCCATCCTCTGTTGGAGAGTCTGAGTATGAGAAGTTCATGGCTGAGATGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

804

Amino Acids

87.05

Weight (kDa)

5.88

Isoelectric Point (pI)

55.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	126 - 237	6.9e-28	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	253 - 333	1.3e-23	KHDC4/BBP-like, KH-domain type I
RRM_1	PF00076	482 - 551	1.1e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1383
AccB1I	GGYRCC	2 cut(s)	1757, 2263
AccB7I	CCANNNNNTGG	1 cut(s)	2185
AccI	GTMKAC	2 cut(s)	1090, 2165
AciI	CCGC	3 cut(s)	308, 1682, 1751
AclWI	GGATC	6 cut(s)	99, 252, 296, 309, 458, 608
AcsI	RAATTY	4 cut(s)	109, 414, 1082, 1441
AgsI	TTSAA	8 cut(s)	476, 484, 637, 898, 965, 986, 1060, 1797
Alw21I	GWGCWC	3 cut(s)	186, 1017, 1026
Alw26I	GTCTC	6 cut(s)	63, 260, 564, 818, 941, 2224
AlwI	GGATC	6 cut(s)	99, 252, 296, 309, 458, 608
AlwNI	CAGNNNCTG	1 cut(s)	575
AoxI	GGCC	3 cut(s)	1642, 2157, 2202
ApeKI	GCWGC	3 cut(s)	968, 971, 2033
ApoI	RAATTY	4 cut(s)	109, 414, 1082, 1441
AseI	ATTAAT	2 cut(s)	324, 1491
Asp700I	GAANNNNTTC	2 cut(s)	440, 734
AspLEI	GCGC	2 cut(s)	338, 1384
AspS9I	GGNCC	6 cut(s)	788, 1322, 1540, 1700, 1817, 2202
AsuC2I	CCSGG	2 cut(s)	1208, 1326
AsuHPI	GGTGA	5 cut(s)	558, 1112, 1190, 1222, 1523
AsuII	TTCGAA	1 cut(s)	1638
AvaII	GGWCC	5 cut(s)	788, 1322, 1540, 1700, 1817
BaeGI	GKGCMC	1 cut(s)	2266
BamHI	GGATCC	1 cut(s)	301
BanI	GGYRCC	2 cut(s)	1757, 2263
BanII	GRGCYC	2 cut(s)	186, 2329
BbsI	GAAGAC	1 cut(s)	927
Bbv12I	GWGCWC	3 cut(s)	186, 1017, 1026
BbvI	GCAGC	3 cut(s)	955, 958, 2020
BccI	CCATC	9 cut(s)	381, 1175, 1475, 1516, 1591, 1774, 1884, 1984, 2371
BceAI	ACGGC	1 cut(s)	2094
BcgI	CGANNNNNNTGC	4 cut(s)	1656, 1690, 2142, 2176
BclI	TGATCA	2 cut(s)	2170, 2230
BcnI	CCSGG	2 cut(s)	1208, 1326
BcoDI	GTCTC	6 cut(s)	63, 260, 564, 818, 941, 2224
BfaI	CTAG	5 cut(s)	41, 333, 369, 609, 1983
BfmI	CTRYAG	2 cut(s)	1087, 2352
BfoI	RGCGCY	1 cut(s)	339
BglII	AGATCT	1 cut(s)	1170
BisI	GCNGC	4 cut(s)	969, 972, 1751, 2034
BlpI	GCTNAGC	1 cut(s)	1556
BlsI	GCNGC	4 cut(s)	970, 973, 1752, 2035
Bme18I	GGWCC	5 cut(s)	788, 1322, 1540, 1700, 1817
BmgT120I	GGNCC	6 cut(s)	788, 1322, 1540, 1700, 1817, 2202
BmiI	GGNNCC	6 cut(s)	303, 790, 1759, 1818, 2265, 2328
BmrI	ACTGGG	3 cut(s)	372, 1233, 1560
BmsI	GCATC	3 cut(s)	886, 1393, 1458
BmuI	ACTGGG	3 cut(s)	372, 1233, 1560
BoxI	GACNNNNGTC	1 cut(s)	556
BpiI	GAAGAC	1 cut(s)	927
BpmI	CTGGAG	6 cut(s)	468, 1493, 1680, 1689, 1788, 2322
Bpu10I	CCTNAGC	5 cut(s)	180, 717, 1040, 1312, 1393
Bpu1102I	GCTNAGC	1 cut(s)	1556
Bpu14I	TTCGAA	1 cut(s)	1638
BpuEI	CTTGAG	2 cut(s)	518, 1710
BpuMI	CCSGG	2 cut(s)	1208, 1326
BsaBI	GATNNNNATC	2 cut(s)	243, 1245
BsaI	GGTCTC	1 cut(s)	564
BsaWI	WCCGGW	1 cut(s)	356
BsaXI	ACNNNNNCTCC	4 cut(s)	271, 301, 1263, 1293
Bse118I	RCCGGY	1 cut(s)	2155
Bse1I	ACTGG	8 cut(s)	367, 451, 832, 1228, 1555, 1789, 1805, 2339
Bse3DI	GCAATG	1 cut(s)	1626
Bse8I	GATNNNNATC	2 cut(s)	243, 1245
BseGI	GGATG	8 cut(s)	516, 541, 1081, 1243, 1384, 1502, 1876, 2363
BseJI	GATNNNNATC	2 cut(s)	243, 1245
BseMI	GCAATG	1 cut(s)	1626
BseNI	ACTGG	8 cut(s)	367, 451, 832, 1228, 1555, 1789, 1805, 2339
BseRI	GAGGAG	4 cut(s)	42, 1701, 1848, 1851
BseSI	GKGCMC	1 cut(s)	2266
BseXI	GCAGC	3 cut(s)	955, 958, 2020
BseYI	CCCAGC	1 cut(s)	1992
BsgI	GTGCAG	1 cut(s)	2136
BshFI	GGCC	3 cut(s)	1644, 2159, 2204
BshNI	GGYRCC	2 cut(s)	1757, 2263
BsiHKAI	GWGCWC	3 cut(s)	186, 1017, 1026
BsiSI	CCGG	6 cut(s)	277, 357, 698, 1208, 1325, 2156
BsiWI	CGTACG	1 cut(s)	1136
BslFI	GGGAC	3 cut(s)	379, 774, 1078
BsmAI	GTCTC	6 cut(s)	63, 260, 564, 818, 941, 2224
BsmFI	GGGAC	3 cut(s)	379, 774, 1078
BsmI	GAATGC	1 cut(s)	1917
BsnI	GGCC	3 cut(s)	1644, 2159, 2204
Bso31I	GGTCTC	1 cut(s)	564
Bsp119I	TTCGAA	1 cut(s)	1638
Bsp1286I	GDGCHC	5 cut(s)	186, 1017, 1026, 2266, 2329
Bsp1407I	TGTACA	2 cut(s)	1446, 1591
Bsp143I	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
Bsp1720I	GCTNAGC	1 cut(s)	1556
Bsp19I	CCATGG	3 cut(s)	1349, 1885, 2198
BspACI	CCGC	3 cut(s)	308, 1682, 1751
BspANI	GGCC	3 cut(s)	1644, 2159, 2204
BspHI	TCATGA	1 cut(s)	432
BspLI	GGNNCC	6 cut(s)	303, 790, 1759, 1818, 2265, 2328
BspMAI	CTGCAG	1 cut(s)	2356
BspPI	GGATC	6 cut(s)	99, 252, 296, 309, 458, 608
BspQI	GCTCTTC	1 cut(s)	1854
BspT104I	TTCGAA	1 cut(s)	1638
BspT107I	GGYRCC	2 cut(s)	1757, 2263
BspTNI	GGTCTC	1 cut(s)	564
BsrDI	GCAATG	1 cut(s)	1626
BsrFI	RCCGGY	1 cut(s)	2155
BsrGI	TGTACA	2 cut(s)	1446, 1591
BsrI	ACTGG	8 cut(s)	367, 451, 832, 1228, 1555, 1789, 1805, 2339
BssAI	RCCGGY	1 cut(s)	2155
BssMI	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
BssT1I	CCWWGG	5 cut(s)	1349, 1811, 1885, 2198, 2258
Bst4CI	ACNGT	8 cut(s)	134, 212, 1095, 1119, 1279, 1544, 1776, 2290
Bst6I	CTCTTC	3 cut(s)	258, 803, 1854
BstAUI	TGTACA	2 cut(s)	1446, 1591
BstBI	TTCGAA	1 cut(s)	1638
BstC8I	GCNNGC	1 cut(s)	1669
BstDSI	CCRYGG	3 cut(s)	1349, 1885, 2198
BstENI	CCTNNNNNAGG	1 cut(s)	1392
BstF5I	GGATG	8 cut(s)	516, 541, 1081, 1243, 1384, 1502, 1876, 2363
BstH2I	RGCGCY	1 cut(s)	339
BstHHI	GCGC	2 cut(s)	338, 1384
BstKTI	GATC	9 cut(s)	46, 94, 247, 304, 466, 603, 1173, 2173, 2233
BstMAI	GTCTC	6 cut(s)	63, 260, 564, 818, 941, 2224
BstMBI	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
BstNSI	RCATGY	3 cut(s)	932, 1128, 2197
BstPAI	GACNNNNGTC	1 cut(s)	556
BstSFI	CTRYAG	2 cut(s)	1087, 2352
BstSLI	GKGCMC	1 cut(s)	2266
BstV1I	GCAGC	3 cut(s)	955, 958, 2020
BstV2I	GAAGAC	1 cut(s)	927
BstX2I	RGATCY	2 cut(s)	301, 1170
BstXI	CCANNNNNNTGG	2 cut(s)	1754, 1812
BstYI	RGATCY	2 cut(s)	301, 1170
BsuRI	GGCC	3 cut(s)	1644, 2159, 2204
BtgI	CCRYGG	3 cut(s)	1349, 1885, 2198
BtsCI	GGATG	8 cut(s)	516, 541, 1081, 1243, 1384, 1502, 1876, 2363
BtsI	GCAGTG	1 cut(s)	72
BtsIMutI	CAGTG	4 cut(s)	72, 444, 1782, 2286
Cac8I	GCNNGC	1 cut(s)	1669
CaiI	CAGNNNCTG	1 cut(s)	575
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	2 cut(s)	338, 1384
Cfr10I	RCCGGY	1 cut(s)	2155
Cfr13I	GGNCC	6 cut(s)	788, 1322, 1540, 1700, 1817, 2202
CseI	GACGC	3 cut(s)	232, 275, 418
CspCI	CAANNNNNGTGG	4 cut(s)	69, 104, 1156, 1191
DpnI	GATC	9 cut(s)	45, 93, 246, 303, 465, 602, 1172, 2172, 2232
DpnII	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
DraI	TTTAAA	2 cut(s)	129, 691
Eam1104I	CTCTTC	3 cut(s)	258, 803, 1854
EarI	CTCTTC	3 cut(s)	258, 803, 1854
EciI	GGCGGA	1 cut(s)	297
Ecl136II	GAGCTC	1 cut(s)	184
Eco130I	CCWWGG	5 cut(s)	1349, 1811, 1885, 2198, 2258
Eco24I	GRGCYC	2 cut(s)	186, 2329
Eco31I	GGTCTC	1 cut(s)	564
Eco47I	GGWCC	5 cut(s)	788, 1322, 1540, 1700, 1817
Eco53kI	GAGCTC	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	184
EcoNI	CCTNNNNNAGG	1 cut(s)	1392
EcoO109I	RGGNCCY	2 cut(s)	1700, 1817
EcoRI	GAATTC	2 cut(s)	109, 1082
EcoT14I	CCWWGG	5 cut(s)	1349, 1811, 1885, 2198, 2258
EcoT22I	ATGCAT	1 cut(s)	1126
EcoT38I	GRGCYC	2 cut(s)	186, 2329
ErhI	CCWWGG	5 cut(s)	1349, 1811, 1885, 2198, 2258
FaqI	GGGAC	3 cut(s)	379, 774, 1078
FauNDI	CATATG	3 cut(s)	96, 1843, 1896
FbaI	TGATCA	2 cut(s)	2170, 2230
FblI	GTMKAC	2 cut(s)	1090, 2165
Fnu4HI	GCNGC	4 cut(s)	969, 972, 1751, 2034
FokI	GGATG	8 cut(s)	523, 548, 1088, 1250, 1371, 1489, 1863, 2350
FriOI	GRGCYC	2 cut(s)	186, 2329
Fsp4HI	GCNGC	4 cut(s)	969, 972, 1751, 2034
FspAI	RTGCGCAY	1 cut(s)	1383
FspBI	CTAG	5 cut(s)	41, 333, 369, 609, 1983
FspI	TGCGCA	1 cut(s)	1383
GlaI	GCGC	2 cut(s)	337, 1383
GluI	GCNGC	4 cut(s)	969, 972, 1751, 2034
GsaI	CCCAGC	1 cut(s)	1996
GsuI	CTGGAG	6 cut(s)	468, 1493, 1680, 1689, 1788, 2322
HaeII	RGCGCY	1 cut(s)	339
HaeIII	GGCC	3 cut(s)	1644, 2159, 2204
HapII	CCGG	6 cut(s)	277, 357, 698, 1208, 1325, 2156
HgaI	GACGC	3 cut(s)	232, 275, 418
HhaI	GCGC	2 cut(s)	338, 1384
Hin6I	GCGC	2 cut(s)	336, 1382
HinP1I	GCGC	2 cut(s)	336, 1382
HincII	GTYRAC	2 cut(s)	1401, 1892
HindII	GTYRAC	2 cut(s)	1401, 1892
HindIII	AAGCTT	3 cut(s)	477, 731, 1999
HpaII	CCGG	6 cut(s)	277, 357, 698, 1208, 1325, 2156
HphI	GGTGA	5 cut(s)	558, 1112, 1190, 1222, 1523
Hpy166II	GTNNAC	6 cut(s)	1091, 1187, 1401, 1892, 1988, 2166
Hpy188III	TCNNGA	8 cut(s)	384, 433, 467, 673, 953, 962, 1335, 1660
Hpy8I	GTNNAC	6 cut(s)	1091, 1187, 1401, 1892, 1988, 2166
Hpy99I	CGWCG	3 cut(s)	14, 291, 2044
HpyCH4III	ACNGT	8 cut(s)	134, 212, 1095, 1119, 1279, 1544, 1776, 2290
HpyCH4IV	ACGT	3 cut(s)	190, 2039, 2316
HpySE526I	ACGT	3 cut(s)	190, 2039, 2316
HspAI	GCGC	2 cut(s)	336, 1382
Ksp22I	TGATCA	2 cut(s)	2170, 2230
Kzo9I	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
LguI	GCTCTTC	1 cut(s)	1854
LmnI	GCTCC	5 cut(s)	82, 726, 1714, 1807, 2332
Lsp1109I	GCAGC	3 cut(s)	955, 958, 2020
LweI	GCATC	3 cut(s)	886, 1393, 1458
MaeI	CTAG	5 cut(s)	41, 333, 369, 609, 1983
MaeII	ACGT	3 cut(s)	190, 2039, 2316
MaeIII	GTNAC	8 cut(s)	233, 420, 492, 761, 1546, 1939, 2074, 2189
MalI	GATC	9 cut(s)	45, 93, 246, 303, 465, 602, 1172, 2172, 2232
MboI	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
MflI	RGATCY	2 cut(s)	301, 1170
MhlI	GDGCHC	5 cut(s)	186, 1017, 1026, 2266, 2329
MlyI	GAGTC	6 cut(s)	14, 125, 301, 326, 943, 2387
MmeI	TCCRAC	5 cut(s)	87, 269, 1430, 2165, 2353
Mph1103I	ATGCAT	1 cut(s)	1126
MroXI	GAANNNNTTC	2 cut(s)	440, 734
MseI	TTAA	6 cut(s)	128, 324, 690, 1149, 1491, 2250
MslI	CAYNNNNRTG	2 cut(s)	743, 2081
MspI	CCGG	6 cut(s)	277, 357, 698, 1208, 1325, 2156
Mva1269I	GAATGC	1 cut(s)	1917
NciI	CCSGG	2 cut(s)	1208, 1326
NcoI	CCATGG	3 cut(s)	1349, 1885, 2198
NdeI	CATATG	3 cut(s)	96, 1843, 1896
NdeII	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
NlaIV	GGNNCC	6 cut(s)	303, 790, 1759, 1818, 2265, 2328
NmeAIII	GCCGAG	1 cut(s)	429
NmuCI	GTSAC	3 cut(s)	1546, 1939, 2074
NsbI	TGCGCA	1 cut(s)	1383
NsiI	ATGCAT	1 cut(s)	1126
NspI	RCATGY	3 cut(s)	932, 1128, 2197
NspV	TTCGAA	1 cut(s)	1638
PagI	TCATGA	1 cut(s)	432
PasI	CCCWGGG	2 cut(s)	792, 2322
PciSI	GCTCTTC	1 cut(s)	1854
PctI	GAATGC	1 cut(s)	1917
PdmI	GAANNNNTTC	2 cut(s)	440, 734
PfeI	GAWTC	6 cut(s)	100, 353, 472, 679, 1286, 2359
Pfl23II	CGTACG	1 cut(s)	1136
PflMI	CCANNNNNTGG	1 cut(s)	2185
PfoI	TCCNGGA	2 cut(s)	1324, 1696
PkrI	GCNGC	4 cut(s)	970, 973, 1752, 2035
PleI	GAGTC	6 cut(s)	13, 124, 300, 325, 943, 2386
PpsI	GAGTC	6 cut(s)	13, 124, 300, 325, 943, 2386
PpuMI	RGGWCCY	2 cut(s)	1700, 1817
PshAI	GACNNNNGTC	1 cut(s)	556
PshBI	ATTAAT	2 cut(s)	324, 1491
Psp124BI	GAGCTC	1 cut(s)	186
Psp5II	RGGWCCY	2 cut(s)	1700, 1817
PspFI	CCCAGC	1 cut(s)	1992
PspLI	CGTACG	1 cut(s)	1136
PspN4I	GGNNCC	6 cut(s)	303, 790, 1759, 1818, 2265, 2328
PspPI	GGNCC	6 cut(s)	788, 1322, 1540, 1700, 1817, 2202
PspPPI	RGGWCCY	2 cut(s)	1700, 1817
PsrI	GAACNNNNNNTAC	4 cut(s)	1439, 1471, 2378, 2410
PstI	CTGCAG	1 cut(s)	2356
PstNI	CAGNNNCTG	1 cut(s)	575
PsuI	RGATCY	2 cut(s)	301, 1170
RseI	CAYNNNNRTG	2 cut(s)	743, 2081
SacI	GAGCTC	1 cut(s)	186
SapI	GCTCTTC	1 cut(s)	1854
SaqAI	TTAA	6 cut(s)	128, 324, 690, 1149, 1491, 2250
SatI	GCNGC	4 cut(s)	969, 972, 1751, 2034
Sau3AI	GATC	9 cut(s)	43, 91, 244, 301, 463, 600, 1170, 2170, 2230
Sau96I	GGNCC	6 cut(s)	788, 1322, 1540, 1700, 1817, 2202
SchI	GAGTC	6 cut(s)	14, 125, 301, 326, 943, 2387
SduI	GDGCHC	5 cut(s)	186, 1017, 1026, 2266, 2329
SfaNI	GCATC	3 cut(s)	886, 1393, 1458
SfcI	CTRYAG	2 cut(s)	1087, 2352
SfuI	TTCGAA	1 cut(s)	1638
SinI	GGWCC	5 cut(s)	788, 1322, 1540, 1700, 1817
SmiMI	CAYNNNNRTG	2 cut(s)	743, 2081
SmlI	CTYRAG	2 cut(s)	497, 1725
SmoI	CTYRAG	2 cut(s)	497, 1725
SsiI	CCGC	3 cut(s)	308, 1682, 1751
SspMI	CTAG	5 cut(s)	41, 333, 369, 609, 1983
SstI	GAGCTC	1 cut(s)	186
StyI	CCWWGG	5 cut(s)	1349, 1811, 1885, 2198, 2258
TaaI	ACNGT	8 cut(s)	134, 212, 1095, 1119, 1279, 1544, 1776, 2290
TaiI	ACGT	3 cut(s)	193, 2042, 2319
TaqI	TCGA	5 cut(s)	12, 383, 619, 939, 1638
TatI	WGTACW	4 cut(s)	1446, 1591, 2014, 2341
TauI	GCSGC	1 cut(s)	1753
TfiI	GAWTC	6 cut(s)	100, 353, 472, 679, 1286, 2359
Tru1I	TTAA	6 cut(s)	128, 324, 690, 1149, 1491, 2250
Tru9I	TTAA	6 cut(s)	128, 324, 690, 1149, 1491, 2250
TscAI	CASTG	4 cut(s)	79, 451, 1789, 2293
TseFI	GTSAC	3 cut(s)	1546, 1939, 2074
TseI	GCWGC	3 cut(s)	968, 971, 2033
Tsp45I	GTSAC	3 cut(s)	1546, 1939, 2074
TspGWI	ACGGA	2 cut(s)	81, 2103
TspRI	CASTG	4 cut(s)	79, 451, 1789, 2293
Van91I	CCANNNNNTGG	1 cut(s)	2185
VpaK11BI	GGWCC	5 cut(s)	788, 1322, 1540, 1700, 1817
VspI	ATTAAT	2 cut(s)	324, 1491
XagI	CCTNNNNNAGG	1 cut(s)	1392
XapI	RAATTY	4 cut(s)	109, 414, 1082, 1441
XceI	RCATGY	3 cut(s)	932, 1128, 2197
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1883
XmiI	GTMKAC	2 cut(s)	1090, 2165
XmnI	GAANNNNTTC	2 cut(s)	440, 734
XspI	CTAG	5 cut(s)	41, 333, 369, 609, 1983
Zsp2I	ATGCAT	1 cut(s)	1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.