Splicing factor 1 helix-hairpin domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51300 AT5G51300 AT5G51300 |
| fragaria_vesca | FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230 |
| malus_domestica | MD01G1181200.v1.1 MD07G1251300.v1.1 |
| prunus_persica | Prupe.2G275100_v2.0.a1 |
| pyrus_communis | pycom01g19120 pycom07g22400 |
| rosa_chinensis | RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831 |
| rosa_laevigata | RLG00000019679 RLG00000026786 |
| rosa_roxburghii | Rroxscaffold_2G00106780 Rroxscaffold_4G00283830 |
| rosa_rugosa | Rorug01G0380300 Rorug02G0346500 |
| rosa_samantha | Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800 |
| rosa_wichuraiana | Rw1G034450 Rw2G032210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 26 |
| AclWI | GGATC | 1 cut(s) | 180 |
| AcsI | RAATTY | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 148 |
| AgsI | TTSAA | 1 cut(s) | 161 |
| AjiI | CACGTC | 1 cut(s) | 186 |
| AluBI | AGCT | 2 cut(s) | 227, 268 |
| AluI | AGCT | 2 cut(s) | 227, 268 |
| AlwI | GGATC | 1 cut(s) | 180 |
| ApeKI | GCWGC | 4 cut(s) | 23, 83, 86, 110 |
| ApoI | RAATTY | 1 cut(s) | 152 |
| AspS9I | GGNCC | 1 cut(s) | 192 |
| AvaII | GGWCC | 1 cut(s) | 192 |
| BbvI | GCAGC | 4 cut(s) | 35, 70, 97, 98 |
| BccI | CCATC | 1 cut(s) | 43 |
| BceAI | ACGGC | 2 cut(s) | 147, 268 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| BisI | GCNGC | 5 cut(s) | 24, 27, 84, 87, 111 |
| BlsI | GCNGC | 5 cut(s) | 25, 28, 85, 88, 112 |
| Bme18I | GGWCC | 1 cut(s) | 192 |
| BmgBI | CACGTC | 1 cut(s) | 186 |
| BmgT120I | GGNCC | 1 cut(s) | 192 |
| BmiI | GGNNCC | 1 cut(s) | 194 |
| BpuEI | CTTGAG | 2 cut(s) | 167, 193 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 148 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseXI | GCAGC | 4 cut(s) | 35, 70, 97, 98 |
| BsiSI | CCGG | 1 cut(s) | 190 |
| BslFI | GGGAC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BsmFI | GGGAC | 1 cut(s) | 221 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspLI | GGNNCC | 1 cut(s) | 194 |
| BspMAI | CTGCAG | 1 cut(s) | 88 |
| BspPI | GGATC | 1 cut(s) | 180 |
| BssMI | GATC | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 123 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 119 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstV1I | GCAGC | 4 cut(s) | 35, 70, 97, 98 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BtrI | CACGTC | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 1 cut(s) | 192 |
| CviAII | CATG | 2 cut(s) | 30, 181 |
| CviJI | RGCY | 5 cut(s) | 89, 122, 134, 227, 268 |
| CviKI_1 | RGCY | 5 cut(s) | 89, 122, 134, 227, 268 |
| DdeI | CTNAG | 1 cut(s) | 123 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| Eco47I | GGWCC | 1 cut(s) | 192 |
| EcoRI | GAATTC | 1 cut(s) | 152 |
| FaeI | CATG | 2 cut(s) | 33, 184 |
| FaiI | YATR | 6 cut(s) | 31, 119, 182, 261, 263, 316 |
| FaqI | GGGAC | 1 cut(s) | 221 |
| FatI | CATG | 2 cut(s) | 29, 180 |
| Fnu4HI | GCNGC | 5 cut(s) | 24, 27, 84, 87, 111 |
| Fsp4HI | GCNGC | 5 cut(s) | 24, 27, 84, 87, 111 |
| GluI | GCNGC | 5 cut(s) | 24, 27, 84, 87, 111 |
| HapII | CCGG | 1 cut(s) | 190 |
| Hin1II | CATG | 2 cut(s) | 33, 184 |
| HindIII | AAGCTT | 1 cut(s) | 266 |
| HpaII | CCGG | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 1 cut(s) | 218 |
| HpyAV | CCTTC | 2 cut(s) | 28, 111 |
| HpyCH4IV | ACGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 1 cut(s) | 86 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 119 |
| HpyF3I | CTNAG | 1 cut(s) | 123 |
| HpySE526I | ACGT | 1 cut(s) | 185 |
| Hsp92II | CATG | 2 cut(s) | 33, 184 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 7 cut(s) | 52, 90, 203, 213, 231, 252, 258 |
| Lsp1109I | GCAGC | 4 cut(s) | 35, 70, 97, 98 |
| MaeII | ACGT | 1 cut(s) | 185 |
| MaeIII | GTNAC | 1 cut(s) | 37 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 2 cut(s) | 23, 167 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MluCI | AATT | 1 cut(s) | 152 |
| MnlI | CCTC | 2 cut(s) | 142, 312 |
| MseI | TTAA | 2 cut(s) | 273, 291 |
| MslI | CAYNNNNRTG | 1 cut(s) | 260 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspI | CCGG | 1 cut(s) | 190 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 119 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 2 cut(s) | 33, 184 |
| NlaIV | GGNNCC | 1 cut(s) | 194 |
| PkrI | GCNGC | 5 cut(s) | 25, 28, 85, 88, 112 |
| PspN4I | GGNNCC | 1 cut(s) | 194 |
| PspPI | GGNCC | 1 cut(s) | 192 |
| PstI | CTGCAG | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| RseI | CAYNNNNRTG | 1 cut(s) | 260 |
| SaqAI | TTAA | 2 cut(s) | 273, 291 |
| SatI | GCNGC | 5 cut(s) | 24, 27, 84, 87, 111 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| Sau96I | GGNCC | 1 cut(s) | 192 |
| SetI | ASST | 6 cut(s) | 39, 62, 103, 188, 229, 270 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SinI | GGWCC | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 260 |
| SmlI | CTYRAG | 2 cut(s) | 146, 208 |
| SmoI | CTYRAG | 2 cut(s) | 146, 208 |
| Sse9I | AATT | 1 cut(s) | 152 |
| SsiI | CCGC | 1 cut(s) | 26 |
| TaiI | ACGT | 1 cut(s) | 188 |
| TaqI | TCGA | 1 cut(s) | 310 |
| TasI | AATT | 1 cut(s) | 152 |
| TauI | GCSGC | 1 cut(s) | 29 |
| Tru1I | TTAA | 2 cut(s) | 273, 291 |
| Tru9I | TTAA | 2 cut(s) | 273, 291 |
| TseI | GCWGC | 4 cut(s) | 23, 83, 86, 110 |
| TspDTI | ATGAA | 2 cut(s) | 24, 278 |
| VpaK11BI | GGWCC | 1 cut(s) | 192 |
| XapI | RAATTY | 1 cut(s) | 152 |