Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Forward (+)

17916053 .. 17918428

Gene Structure 2376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g19120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGAGGCTGCTCTCCAATCAAACCCTAACCTTCCTCCTCCAATCGAATCCCTAGATCCTCACCCTCCTCATTCCGATTTCATTCCTCCTCCCCCTACAGAAGCCCTAGCCTCAGATTCTAATGGCCCATCTCAACCAGCGCCCACTGAAACCCTAGCATCCTATGCTCAAGACCCCTCCACGAATCCCAATACCGCTACTGAGAACGGTAACTCGACTGACGCCTGCAAGGTACTTGCTATTATGAAGCCGCTGCTGTCGGAAAACGGATTGACCAACACCACTAGCGGTATTGAGTTTGATCCAGAAATTCAAGCTTTGAATAGTAGGTTGCTTGAGATTAGTCGAATGCTGTCTTCGGGGTTGCCCTTAGATGATCGTCCCGAAGGGGCTAGGTCTCCTTCGCCGGAACCTATATATGATAACATGGGAATTAGGATTAATACTAGAGAGTTCCGTGCCCGTGAGAGGTTGAACAAAGAGAGGCAGGAAATTATTGCCCAGATTATTAAGAGGAACCCAGCATTTAAACCCCCGGCTGATTACAGGCCACCCAAGCTTCACAAGAAGCTTTACATACCGATGAAGGAATATCCCGGATACAATTTTATCGGACTTATCATTGGGCCAAGGGGTAATACCCAGAAGAGGATGGAGAAAGAAACTGGTGCAAAAATTGTCATTAGGGGTAAAGGTTCGGTGAAAGAGGGTAGGTCACAACAGAAGAGGGATTTGAAACCTGACCCTTCCGAGAACGAGGACTTGCATGTTTTGGTTGAGGCCGACACACAAGACGCTCTTGATGCTGCGGCTGGGATGGTGGAGAAACTCTTGCAGCCTGTCGATGAGGTGTTGAATGAGCATAAGAGGCAACAACTTAGGGAACTTGCGTCATTGAATGGGACAATAAGGGATGAGGAGTATTGTAGGTTGTGTGGTGAGCCAGGGCACCGTCAGTATGCTTGTCCATCACGTACTTCGACCTTTAAGAGTGATGTTCTTTGTAAGATATGTGGTGATGGTGGGCATCCAACCATTGATTGCCCAGTGAAGGGTACAACTGGGAAGAAAATGGATGATGAGTATCAGAACTTCTTGGCTGAGTTAGGGGGGACAGTTCCTGAATCTGCAACTAAGCAGACCGCTACATTAGCACTTGGCCCAGGCAACAGTACATCAAGCAATCCTCCTTGGGCTAACAGTACTGGCAGTGCTAGTGCATCATCACATCCAGGCTTGGGATCGATTGGAGTCAAGCCAGTCAAGGACTATGACGAGACAAACTTGTACATTGGATACTTGCCGCCTACTTTTGACGATGATGGTTTGATCCAATTGTTTTCACCATTTGGTGATATTGTGATGGCCAAAGTTATCAAGGACCGAGTTACTGGAGCAAGTAAAGGTTATGGTTTTGTGAAGTACGGAGATGTTCAAATGGCTAATAATGCAATTGCACGCATGAATGGTTATCGCCTAGACCAGCGAACCATTGCTGTCAGAGTTGCTGGCAAGCCTCCTCAGCCTGCTGCGCCTCCTGGACCTCCAGCATCGGCACTGCCCACATACGCGGTTCCCCAGCCTGTTGGTGCCTATCCATCCCAGCAGTTTACCGCAGGTGGTCCTCTTGGGAATGCACCACCTACTAGCTACGCGGGTACTCCTGTTCCTTGGGGGCCCCCTGTTCCTCCGCCTTATGCTCCTTATGCTCCACCTCCTCCACATCCCCCTGGTTCAACCATGTATCCTCCTCCCATGGCGGGTCAACATATGGCTCCTTATGGTGCACGATACCCTCCTCCACCTGGGGCACCACCTCAACCGGTGACTTCAAGTGAAGCACAACAGAGTTATCCCCCTCCAGGGGTTCAATCTGAACACAATGTCTCTACCCAATCTCTACAATCTAATATGTATGGAGGCTCCTCAGCACCAATGCCACCAAACGGCCAACACACTTATCCTGCTGCTTCGTATGGTTACTCATCTTACTACAATGCAGTTCCACCACCTCCGCCTCCCCCCGCCCATGTACCTGGATCGACTGTAGACCAATCTCAGAACATTGGTAACGTTCCATGGGCCACGAGTGCTCAGGTTCCCCCTCATGCTTCTTCTGCGGAAAGGACAACTTATGGTGCAGATGCAGAGTATGAGAAGTTCATGGCAGAAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

727

Amino Acids

77.75

Weight (kDa)

5.85

Isoelectric Point (pI)

53.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	104 - 183	6.4e-24	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	197 - 279	2.4e-24	KHDC4/BBP-like, KH-domain type I
RRM_1	PF00076	429 - 498	1.3e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1607
Acc36I	ACCTGC	1 cut(s)	1607
AccB1I	GGYRCC	3 cut(s)	948, 1589, 1810
AccI	GTMKAC	1 cut(s)	2049
AccII	CGCG	2 cut(s)	1571, 1655
AclI	AACGTT	1 cut(s)	2073
AclWI	GGATC	5 cut(s)	50, 296, 1249, 1324, 2047
AcoI	YGGCCR	2 cut(s)	1365, 1948
AcsI	RAATTY	1 cut(s)	309
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	9 cut(s)	234, 976, 1057, 1174, 1204, 1289, 1424, 1660, 2034
AgeI	ACCGGT	1 cut(s)	1822
AjnI	CCWGG	8 cut(s)	943, 1162, 1231, 1537, 1729, 1804, 1861, 2035
AluBI	AGCT	4 cut(s)	317, 559, 571, 1650
AluI	AGCT	4 cut(s)	317, 559, 571, 1650
Alw21I	GWGCWC	2 cut(s)	1789, 2095
Alw26I	GTCTC	3 cut(s)	402, 1271, 1891
Alw44I	GTGCAC	1 cut(s)	1785
AlwI	GGATC	5 cut(s)	50, 296, 1249, 1324, 2047
AlwNI	CAGNNNCTG	1 cut(s)	1121
AoxI	GGCC	9 cut(s)	124, 548, 626, 780, 1159, 1365, 1676, 1948, 2082
ApaI	GGGCCC	1 cut(s)	1680
ApaLI	GTGCAC	1 cut(s)	1785
ApeKI	GCWGC	6 cut(s)	8, 253, 806, 835, 1529, 1967
ApoI	RAATTY	1 cut(s)	309
AseI	ATTAAT	1 cut(s)	441
AsiGI	ACCGGT	1 cut(s)	1822
AspLEI	GCGC	2 cut(s)	142, 1534
AspS9I	GGNCC	9 cut(s)	125, 626, 1160, 1381, 1541, 1622, 1676, 1677, 2082
AsuC2I	CCSGG	2 cut(s)	536, 597
AsuHPI	GGTGA	7 cut(s)	53, 712, 950, 1028, 1335, 1364, 1837
AvaII	GGWCC	3 cut(s)	1381, 1541, 1622
BaeGI	GKGCMC	5 cut(s)	463, 951, 1680, 1789, 1813
BaeI	ACNNNNGTAYC	2 cut(s)	1650, 1683
BalI	TGGCCA	1 cut(s)	1367
BanI	GGYRCC	3 cut(s)	948, 1589, 1810
BanII	GRGCYC	1 cut(s)	1680
BarI	GAAGNNNNNNTAC	2 cut(s)	1076, 1108
BauI	CACGAG	1 cut(s)	2086
BbsI	GAAGAC	1 cut(s)	348
Bbv12I	GWGCWC	2 cut(s)	1789, 2095
BbvCI	CCTCAGC	2 cut(s)	1521, 1927
BbvI	GCAGC	5 cut(s)	240, 793, 847, 1516, 1954
BccI	CCATC	8 cut(s)	136, 646, 811, 976, 1013, 1316, 1357, 1606
BceAI	ACGGC	1 cut(s)	1963
BciT130I	CCWGG	8 cut(s)	945, 1164, 1233, 1539, 1731, 1806, 1863, 2037
BciVI	GTATCC	3 cut(s)	593, 1289, 1755
BcnI	CCSGG	2 cut(s)	536, 597
BcoDI	GTCTC	3 cut(s)	402, 1271, 1891
BfaI	CTAG	9 cut(s)	53, 107, 155, 285, 393, 447, 1215, 1478, 1647
BfmI	CTRYAG	2 cut(s)	96, 2046
BfoI	RGCGCY	1 cut(s)	143
BfuAI	ACCTGC	1 cut(s)	1607
BfuI	GTATCC	3 cut(s)	593, 1289, 1755
BisI	GCNGC	9 cut(s)	9, 251, 254, 807, 810, 836, 1304, 1530, 1968
BlsI	GCNGC	9 cut(s)	10, 252, 255, 808, 811, 837, 1305, 1531, 1969
BmcAI	AGTACT	1 cut(s)	1204
Bme18I	GGWCC	3 cut(s)	1381, 1541, 1622
BmgT120I	GGNCC	9 cut(s)	125, 626, 1160, 1381, 1541, 1622, 1676, 1677, 2082
BmrI	ACTGGG	2 cut(s)	1040, 1071
BmsI	GCATC	6 cut(s)	167, 793, 1036, 1229, 1559, 2134
BmuI	ACTGGG	2 cut(s)	1040, 1071
BpiI	GAAGAC	1 cut(s)	348
BpmI	CTGGAG	3 cut(s)	1413, 1530, 1845
Bpu10I	CCTNAGC	3 cut(s)	1521, 1927, 2094
BpuEI	CTTGAG	2 cut(s)	153, 356
BpuMI	CCSGG	2 cut(s)	536, 597
Bsa29I	ATCGAT	1 cut(s)	1244
BsaAI	YACGTR	1 cut(s)	974
BsaBI	GATNNNNATC	1 cut(s)	1083
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	1 cut(s)	402
BsaWI	WCCGGW	1 cut(s)	1822
Bse118I	RCCGGY	1 cut(s)	1822
Bse1I	ACTGG	6 cut(s)	670, 1046, 1066, 1210, 1259, 1396
Bse3DI	GCAATG	1 cut(s)	1491
Bse8I	GATNNNNATC	1 cut(s)	1083
BseBI	CCWGG	8 cut(s)	945, 1164, 1233, 1539, 1731, 1806, 1863, 2037
BseCI	ATCGAT	1 cut(s)	1244
BseGI	GGATG	9 cut(s)	158, 657, 822, 919, 1027, 1081, 1228, 1598, 1723
BseJI	GATNNNNATC	1 cut(s)	1083
BseMI	GCAATG	1 cut(s)	1491
BseMII	CTCAG	7 cut(s)	126, 192, 1092, 1535, 1941, 2072, 2108
BseNI	ACTGG	6 cut(s)	670, 1046, 1066, 1210, 1259, 1396
BseRI	GAGGAG	9 cut(s)	27, 57, 78, 932, 1509, 1707, 1740, 1788, 1915
BseSI	GKGCMC	5 cut(s)	463, 951, 1680, 1789, 1813
BseXI	GCAGC	5 cut(s)	240, 793, 847, 1516, 1954
BseYI	CCCAGC	4 cut(s)	520, 812, 1578, 1602
BsgI	GTGCAG	1 cut(s)	2160
Bsh1236I	CGCG	2 cut(s)	1571, 1655
BshFI	GGCC	9 cut(s)	126, 550, 628, 782, 1161, 1367, 1678, 1950, 2084
BshNI	GGYRCC	3 cut(s)	948, 1589, 1810
BshTI	ACCGGT	1 cut(s)	1822
BshVI	ATCGAT	1 cut(s)	1244
BsiHKAI	GWGCWC	2 cut(s)	1789, 2095
BsiSI	CCGG	4 cut(s)	407, 536, 597, 1823
BslFI	GGGAC	3 cut(s)	366, 916, 1126
BsmAI	GTCTC	3 cut(s)	402, 1271, 1891
BsmFI	GGGAC	3 cut(s)	366, 916, 1126
BsmI	GAATGC	2 cut(s)	354, 1639
BsnI	GGCC	9 cut(s)	126, 550, 628, 782, 1161, 1367, 1678, 1950, 2084
Bso31I	GGTCTC	1 cut(s)	402
Bsp120I	GGGCCC	1 cut(s)	1676
Bsp1286I	GDGCHC	6 cut(s)	463, 951, 1680, 1789, 1813, 2095
Bsp1407I	TGTACA	1 cut(s)	1287
Bsp143I	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
Bsp19I	CCATGG	2 cut(s)	1755, 2078
BspANI	GGCC	9 cut(s)	126, 550, 628, 782, 1161, 1367, 1678, 1950, 2084
BspCNI	CTCAG	7 cut(s)	125, 193, 1093, 1534, 1940, 2071, 2107
BspDI	ATCGAT	1 cut(s)	1244
BspFNI	CGCG	2 cut(s)	1571, 1655
BspMI	ACCTGC	1 cut(s)	1607
BspPI	GGATC	5 cut(s)	50, 296, 1249, 1324, 2047
BspT107I	GGYRCC	3 cut(s)	948, 1589, 1810
BspTNI	GGTCTC	1 cut(s)	402
BsrDI	GCAATG	1 cut(s)	1491
BsrFI	RCCGGY	1 cut(s)	1822
BsrGI	TGTACA	1 cut(s)	1287
BsrI	ACTGG	6 cut(s)	670, 1046, 1066, 1210, 1259, 1396
BssAI	RCCGGY	1 cut(s)	1822
BssMI	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
BssNI	GRCGYC	1 cut(s)	222
BssSI	CACGAG	1 cut(s)	2086
BssT1I	CCWWGG	5 cut(s)	629, 1190, 1670, 1755, 2078
Bst2BI	CACGAG	1 cut(s)	2086
Bst2UI	CCWGG	8 cut(s)	945, 1164, 1233, 1539, 1731, 1806, 1863, 2037
Bst4CI	ACNGT	6 cut(s)	209, 953, 1117, 1172, 1202, 2047
Bst6I	CTCTTC	2 cut(s)	641, 719
BstACI	GRCGYC	1 cut(s)	222
BstAPI	GCANNNNNTGC	1 cut(s)	164
BstAUI	TGTACA	1 cut(s)	1287
BstBAI	YACGTR	1 cut(s)	974
BstC8I	GCNNGC	5 cut(s)	226, 1459, 1510, 1514, 1527
BstDSI	CCRYGG	2 cut(s)	1755, 2078
BstF5I	GGATG	9 cut(s)	158, 657, 822, 919, 1027, 1081, 1228, 1598, 1723
BstFNI	CGCG	2 cut(s)	1571, 1655
BstH2I	RGCGCY	1 cut(s)	143
BstHHI	GCGC	2 cut(s)	142, 1534
BstKTI	GATC	6 cut(s)	58, 304, 379, 1244, 1332, 2042
BstMAI	GTCTC	3 cut(s)	402, 1271, 1891
BstMBI	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
BstNI	CCWGG	8 cut(s)	945, 1164, 1233, 1539, 1731, 1806, 1863, 2037
BstNSI	RCATGY	1 cut(s)	770
BstSFI	CTRYAG	2 cut(s)	96, 2046
BstSLI	GKGCMC	5 cut(s)	463, 951, 1680, 1789, 1813
BstUI	CGCG	2 cut(s)	1571, 1655
BstV1I	GCAGC	5 cut(s)	240, 793, 847, 1516, 1954
BstV2I	GAAGAC	1 cut(s)	348
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	2 cut(s)	1586, 2036
BstYI	RGATCY	1 cut(s)	55
Bsu15I	ATCGAT	1 cut(s)	1244
BsuI	GTATCC	3 cut(s)	593, 1289, 1755
BsuRI	GGCC	9 cut(s)	126, 550, 628, 782, 1161, 1367, 1678, 1950, 2084
BsuTUI	ATCGAT	1 cut(s)	1244
BtgI	CCRYGG	2 cut(s)	1755, 2078
BtsCI	GGATG	9 cut(s)	158, 657, 822, 919, 1027, 1081, 1228, 1598, 1723
BtsI	GCAGTG	2 cut(s)	1216, 1556
BtsIMutI	CAGTG	4 cut(s)	144, 1053, 1216, 1556
BveI	ACCTGC	1 cut(s)	1607
Cac8I	GCNNGC	5 cut(s)	226, 1459, 1510, 1514, 1527
CaiI	CAGNNNCTG	1 cut(s)	1121
CfoI	GCGC	2 cut(s)	142, 1534
Cfr10I	RCCGGY	1 cut(s)	1822
Cfr13I	GGNCC	9 cut(s)	125, 626, 1160, 1381, 1541, 1622, 1676, 1677, 2082
ClaI	ATCGAT	1 cut(s)	1244
CseI	GACGC	3 cut(s)	230, 803, 879
Csp6I	GTAC	9 cut(s)	233, 975, 1056, 1173, 1203, 1288, 1423, 1659, 2033
CspAI	ACCGGT	1 cut(s)	1822
CviAII	CATG	9 cut(s)	427, 767, 1462, 1741, 1756, 2030, 2079, 2108, 2164
CviQI	GTAC	9 cut(s)	233, 975, 1056, 1173, 1203, 1288, 1423, 1659, 2033
DpnI	GATC	6 cut(s)	57, 303, 378, 1243, 1331, 2041
DpnII	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
DraI	TTTAAA	1 cut(s)	529
EaeI	YGGCCR	2 cut(s)	1365, 1948
Eam1104I	CTCTTC	2 cut(s)	641, 719
EarI	CTCTTC	2 cut(s)	641, 719
EciI	GGCGGA	2 cut(s)	1680, 2004
Eco130I	CCWWGG	5 cut(s)	629, 1190, 1670, 1755, 2078
Eco24I	GRGCYC	1 cut(s)	1680
Eco31I	GGTCTC	1 cut(s)	402
Eco47I	GGWCC	3 cut(s)	1381, 1541, 1622
EcoO109I	RGGNCCY	2 cut(s)	1676, 1677
EcoRII	CCWGG	8 cut(s)	943, 1162, 1231, 1537, 1729, 1804, 1861, 2035
EcoT14I	CCWWGG	5 cut(s)	629, 1190, 1670, 1755, 2078
EcoT38I	GRGCYC	1 cut(s)	1680
ErhI	CCWWGG	5 cut(s)	629, 1190, 1670, 1755, 2078
FaeI	CATG	9 cut(s)	430, 770, 1465, 1744, 1759, 2033, 2082, 2111, 2167
FalI	AAGNNNNNCTT	4 cut(s)	783, 815, 2116, 2148
FaqI	GGGAC	3 cut(s)	366, 916, 1126
FatI	CATG	9 cut(s)	426, 766, 1461, 1740, 1755, 2029, 2078, 2107, 2163
FauI	CCCGC	3 cut(s)	1648, 1753, 2032
FauNDI	CATATG	1 cut(s)	1770
FblI	GTMKAC	1 cut(s)	2049
Fnu4HI	GCNGC	9 cut(s)	9, 251, 254, 807, 810, 836, 1304, 1530, 1968
FokI	GGATG	9 cut(s)	145, 664, 829, 926, 1014, 1088, 1215, 1585, 1710
FriOI	GRGCYC	1 cut(s)	1680
Fsp4HI	GCNGC	9 cut(s)	9, 251, 254, 807, 810, 836, 1304, 1530, 1968
FspBI	CTAG	9 cut(s)	53, 107, 155, 285, 393, 447, 1215, 1478, 1647
GlaI	GCGC	2 cut(s)	141, 1533
GluI	GCNGC	9 cut(s)	9, 251, 254, 807, 810, 836, 1304, 1530, 1968
GsaI	CCCAGC	4 cut(s)	524, 816, 1582, 1606
GsuI	CTGGAG	3 cut(s)	1413, 1530, 1845
HaeII	RGCGCY	1 cut(s)	143
HaeIII	GGCC	9 cut(s)	126, 550, 628, 782, 1161, 1367, 1678, 1950, 2084
HapII	CCGG	4 cut(s)	407, 536, 597, 1823
HgaI	GACGC	3 cut(s)	230, 803, 879
HhaI	GCGC	2 cut(s)	142, 1534
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	9 cut(s)	430, 770, 1465, 1744, 1759, 2033, 2082, 2111, 2167
Hin6I	GCGC	2 cut(s)	140, 1532
HinP1I	GCGC	2 cut(s)	140, 1532
HincII	GTYRAC	1 cut(s)	1766
HindII	GTYRAC	1 cut(s)	1766
HindIII	AAGCTT	3 cut(s)	315, 557, 569
HinfI	GANTC	5 cut(s)	47, 116, 184, 1124, 1251
HpaII	CCGG	4 cut(s)	407, 536, 597, 1823
HphI	GGTGA	7 cut(s)	53, 712, 950, 1028, 1335, 1364, 1837
Hpy166II	GTNNAC	4 cut(s)	1611, 1766, 1787, 2050
Hpy188I	TCNGA	9 cut(s)	76, 115, 262, 614, 751, 1089, 1502, 1876, 2061
Hpy188III	TCNNGA	5 cut(s)	170, 305, 383, 800, 1121
Hpy8I	GTNNAC	4 cut(s)	1611, 1766, 1787, 2050
HpyAV	CCTTC	6 cut(s)	41, 380, 411, 580, 756, 1045
HpyCH4III	ACNGT	6 cut(s)	209, 953, 1117, 1172, 1202, 2047
HpyCH4IV	ACGT	2 cut(s)	973, 2073
HpySE526I	ACGT	2 cut(s)	973, 2073
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	9 cut(s)	430, 770, 1465, 1744, 1759, 2033, 2082, 2111, 2167
HspAI	GCGC	2 cut(s)	140, 1532
Kzo9I	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
LmnI	GCTCC	5 cut(s)	1394, 1705, 1714, 1780, 1928
Lsp1109I	GCAGC	5 cut(s)	240, 793, 847, 1516, 1954
LweI	GCATC	6 cut(s)	167, 793, 1036, 1229, 1559, 2134
MaeI	CTAG	9 cut(s)	53, 107, 155, 285, 393, 447, 1215, 1478, 1647
MaeII	ACGT	2 cut(s)	973, 2073
MaeIII	GTNAC	6 cut(s)	209, 714, 1387, 1825, 1979, 2069
MalI	GATC	6 cut(s)	57, 303, 378, 1243, 1331, 2041
MboI	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
MboII	GAAGA	5 cut(s)	348, 658, 736, 1078, 2106
MfeI	CAATTG	2 cut(s)	1334, 1452
MflI	RGATCY	1 cut(s)	55
MhlI	GDGCHC	6 cut(s)	463, 951, 1680, 1789, 1813, 2095
MlsI	TGGCCA	1 cut(s)	1367
MluCI	AATT	7 cut(s)	309, 432, 492, 604, 675, 1334, 1452
MluNI	TGGCCA	1 cut(s)	1367
MlyI	GAGTC	1 cut(s)	1260
MmeI	TCCRAC	2 cut(s)	240, 1055
Mox20I	TGGCCA	1 cut(s)	1367
MscI	TGGCCA	1 cut(s)	1367
MseI	TTAA	4 cut(s)	441, 510, 528, 987
MslI	CAYNNNNRTG	1 cut(s)	581
Msp20I	TGGCCA	1 cut(s)	1367
MspA1I	CMGCKG	1 cut(s)	253
MspI	CCGG	4 cut(s)	407, 536, 597, 1823
MunI	CAATTG	2 cut(s)	1334, 1452
Mva1269I	GAATGC	2 cut(s)	354, 1639
MvaI	CCWGG	8 cut(s)	945, 1164, 1233, 1539, 1731, 1806, 1863, 2037
MvnI	CGCG	2 cut(s)	1571, 1655
NciI	CCSGG	2 cut(s)	536, 597
NcoI	CCATGG	2 cut(s)	1755, 2078
NdeI	CATATG	1 cut(s)	1770
NdeII	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
NlaIII	CATG	9 cut(s)	430, 770, 1465, 1744, 1759, 2033, 2082, 2111, 2167
NmuCI	GTSAC	2 cut(s)	714, 1825
NspI	RCATGY	1 cut(s)	770
PaqCI	CACCTGC	1 cut(s)	1607
PctI	GAATGC	2 cut(s)	354, 1639
PfeI	GAWTC	4 cut(s)	47, 116, 184, 1124
PfoI	TCCNGGA	2 cut(s)	595, 1537
PinAI	ACCGGT	1 cut(s)	1822
PkrI	GCNGC	9 cut(s)	10, 252, 255, 808, 811, 837, 1305, 1531, 1969
PleI	GAGTC	1 cut(s)	1259
PpsI	GAGTC	1 cut(s)	1259
Ppu21I	YACGTR	1 cut(s)	974
PshBI	ATTAAT	1 cut(s)	441
Psp1406I	AACGTT	1 cut(s)	2073
Psp6I	CCWGG	8 cut(s)	943, 1162, 1231, 1537, 1729, 1804, 1861, 2035
PspFI	CCCAGC	4 cut(s)	520, 812, 1578, 1602
PspGI	CCWGG	8 cut(s)	943, 1162, 1231, 1537, 1729, 1804, 1861, 2035
PspOMI	GGGCCC	1 cut(s)	1676
PspPI	GGNCC	9 cut(s)	125, 626, 1160, 1381, 1541, 1622, 1676, 1677, 2082
PsrI	GAACNNNNNNTAC	2 cut(s)	2144, 2176
PstNI	CAGNNNCTG	1 cut(s)	1121
PsuI	RGATCY	1 cut(s)	55
RsaI	GTAC	9 cut(s)	234, 976, 1057, 1174, 1204, 1289, 1424, 1660, 2034
RsaNI	GTAC	9 cut(s)	233, 975, 1056, 1173, 1203, 1288, 1423, 1659, 2033
RseI	CAYNNNNRTG	1 cut(s)	581
SaqAI	TTAA	4 cut(s)	441, 510, 528, 987
SatI	GCNGC	9 cut(s)	9, 251, 254, 807, 810, 836, 1304, 1530, 1968
Sau3AI	GATC	6 cut(s)	55, 301, 376, 1241, 1329, 2039
Sau96I	GGNCC	9 cut(s)	125, 626, 1160, 1381, 1541, 1622, 1676, 1677, 2082
ScaI	AGTACT	1 cut(s)	1204
SchI	GAGTC	1 cut(s)	1260
SduI	GDGCHC	6 cut(s)	463, 951, 1680, 1789, 1813, 2095
SfaNI	GCATC	6 cut(s)	167, 793, 1036, 1229, 1559, 2134
SfcI	CTRYAG	2 cut(s)	96, 2046
SinI	GGWCC	3 cut(s)	1381, 1541, 1622
SmiMI	CAYNNNNRTG	1 cut(s)	581
SmlI	CTYRAG	2 cut(s)	168, 335
SmoI	CTYRAG	2 cut(s)	168, 335
Sse9I	AATT	7 cut(s)	309, 432, 492, 604, 675, 1334, 1452
SspMI	CTAG	9 cut(s)	53, 107, 155, 285, 393, 447, 1215, 1478, 1647
StyI	CCWWGG	5 cut(s)	629, 1190, 1670, 1755, 2078
TaaI	ACNGT	6 cut(s)	209, 953, 1117, 1172, 1202, 2047
TaiI	ACGT	2 cut(s)	976, 2076
TaqI	TCGA	7 cut(s)	45, 215, 346, 843, 980, 1244, 2042
TaqII	GACCGA	1 cut(s)	1398
TasI	AATT	7 cut(s)	309, 432, 492, 604, 675, 1334, 1452
TatI	WGTACW	3 cut(s)	1172, 1202, 1287
TauI	GCSGC	3 cut(s)	253, 812, 1306
TfiI	GAWTC	4 cut(s)	47, 116, 184, 1124
Tru1I	TTAA	4 cut(s)	441, 510, 528, 987
Tru9I	TTAA	4 cut(s)	441, 510, 528, 987
TscAI	CASTG	4 cut(s)	151, 1053, 1216, 1563
TseFI	GTSAC	2 cut(s)	714, 1825
TseI	GCWGC	6 cut(s)	8, 253, 806, 835, 1529, 1967
Tsp45I	GTSAC	2 cut(s)	714, 1825
TspDTI	ATGAA	5 cut(s)	70, 260, 599, 1478, 2152
TspGWI	ACGGA	3 cut(s)	282, 446, 1440
TspRI	CASTG	4 cut(s)	151, 1053, 1216, 1563
VneI	GTGCAC	1 cut(s)	1785
VpaK11BI	GGWCC	3 cut(s)	1381, 1541, 1622
VspI	ATTAAT	1 cut(s)	441
XapI	RAATTY	1 cut(s)	309
XceI	RCATGY	1 cut(s)	770
XmiI	GTMKAC	1 cut(s)	2049
XspI	CTAG	9 cut(s)	53, 107, 155, 285, 393, 447, 1215, 1478, 1647
ZrmI	AGTACT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.