Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Forward (+)

53066297 .. 53068573

Gene Structure 2277 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G032210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCAACTCTCCAACCAAACCGTAACCCTCCTCCCATTGACGATGATGAACCGGATCACGACCCGCCTTATTTTCCCGCCATTTCCGAAATCCCAATGGCTCCGCCTTCGACTCTTCAGTGCGCTCAAACCCTAGCTTCCGGTGCCGGAATTCCCTCCCGGAATCCCGAGACTTCTACTGAGAACGGCGACTCGACCGAACCGGTTGCTAATGGCTTCGGCGCCGACCTGGACTTCTCCGGCGGAGAGGAGGAGGCCTCCAGCAGCCGCCGCCGCCGGAGCCGGTGGGACCCTCAGCCGGAGACGGAAAGCCAGAGCGGCGTCTGCGCGAGGAGGAGGAAGTCGCGGTGGGCCGATGAGGAGCCGAAGCTGGTGATTCAGCTGCCGGGGTTCGTGGGAGGTATTGAATTCGATCCTGAAATTCAAGCTTTGAATAGTAGGCATCTTGAGATTAGTAGGATGTTGTCTTCCGGTTTGCCTTTAGATGATCGCCCGGAAGGGGATAGGTCTCCATCGCCGGAGCCGGTGTATGATAACTTTGGAATTAGGATTAATACAAGAGAGTTTCGTGCGCGTGAGAGGTTGAACAAAGAGAGGCAGGAAATTATTACTCAGATTATTAAGAGGAACCCTACATTTAAGCCCCCGGCAGATTACAGGCCGCCCAAGCTTCACAAGAAGCTGTACATACCCGTGAAAGAGTACCCTGGTTATAGTTTTATGGGACTTATCATTGGCCCGAGGGGGAATACCCAGAAGAGGATGGAGAAGGAGACTGGTGCTAAGATTGTCATTAGGGGTAGAGGGTCGGTGAAAGAGGGTAGGTCGCAACAGAAGAGGGATTCGAAGCCTGACCTGTCTGAAAATGAGGACTTGCATGTTTTGGTCGAGGCTGACACGCAGGAGGCTGTTGATGCCGCAACTGGGATGGTAGAGAAGCTGTTGCAGCCTGTGGATGAGGTGTTGAATGAGCATAAGAGGCAGCAGCTTAAGGAACTCGCGTTGTTGAATGGGACTATTAGGGAAGAGGAGTTTTGTAGGTTATGTGGTGAGCCGGGGCACCATCAGAATGCCTGTCTGTCACGAACTTCAACGTTTAAGAGAGATGTTCTTTGTAAGATATGTGGTGATGGTGGGCATCCAATTATTGATTGTCCAGTGAAGCGTACGAATGGGAAGAAAATGGATGATGAGTACCAGAACTTTTTGGCTGAGTTAGGTGGGACAATGCCCGAATCAGCAACTAAGCAGACTGCTACTTTGGCTCTTGGCGCAGGCAGCTCGGTAAGCAGTCCTCCTTGGGTTAACAATGCTGGGAATGCTAGCAGTACAGCACATCCAGGATTGGGCTCAACTGGATTGAAGCCTAGCAGGGACTATGATGACACAAATTTGTACATTGGGCACTTGCCACCTACTCTTGATGATGATGGTTTGATAAGGTTGTTTTCACGTTTCGGTAATATTGTGATGTGCAAAGTTATTAAGGACCGGGCTATTGGATTGAGTAAAGGTTATGGATTTGTGAAGTACGCTGATGTTCGGATGGCTAATAGTGCAATTGCAAGCATGAATGGTTTTTCCCTCGAGGGTCGAACCATTGCTGTCAGAGTTGCTGGCAAGCCTCAACAGCCTGTTGTGTCTCCTGGACCACCAGCTTCGGCAATGTCACCATACCCGGTCTCAAGCCAGCCTGTTGGTGCTTATCCATCCCAGCAATTTACCCCAGGTGGCCCTCTTTGGACTGTACCATCTACTAGCTATGCAGGAACTCCAGTTCCTTGGGGAACCCCTGTTCCTCCTCCATATTCTCCTTATGCTTCTCCAGCTCCCCCTCCTCCAGGTTCAACCATGTACCCTTCTCCCACGCCGGGTCAACCTGTGGCTGCTTACAGTGCACAATACCCTCCTCCTCCTGGTGCATCACGTCAGCCAGTGACGTTAAGTGAAGCACAACAGAGTTATACTCCTCCAGGGGTACAATCTGAAAGATCTACCCAATCTGCACCAACTAATATATACACAATGCCAACAAATGGCCAACATGCTTATCCTACATCTGCATGTGGCGACCCATCTTACTACAATGCAGTTCCACCACCTCCTGCCCCCGGACCTGTACCTGGTTCAACTGCATACCAATCCCAGAGCATTGGTAATGTGCCATGGGCCACAAGTACTCCTGTTCTTCCTCCTAATTCTTCTGCAGATAAAGCAACTCACGGTGCAGATGCAGAGTATGAGAAGTTCATGGCGGGTATGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

755

Amino Acids

81.57

Weight (kDa)

6.14

Isoelectric Point (pI)

64.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	113 - 220	2.4e-24	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	234 - 316	1.2e-23	KHDC4/BBP-like, KH-domain type I
RRM_1	PF00076	465 - 534	7.5e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1586
AccB1I	GGYRCC	3 cut(s)	143, 221, 1059
AccB7I	CCANNNNNTGG	1 cut(s)	2036
AccBSI	CCGCTC	1 cut(s)	318
AccII	CGCG	4 cut(s)	329, 346, 574, 1001
AclI	AACGTT	1 cut(s)	1094
AclWI	GGATC	2 cut(s)	63, 407
AcoI	YGGCCR	1 cut(s)	2038
AcsI	RAATTY	4 cut(s)	150, 407, 420, 1390
AcuI	CTGAAG	1 cut(s)	101
AcyI	GRCGYC	2 cut(s)	222, 321
AflII	CTTAAG	1 cut(s)	989
AgeI	ACCGGT	1 cut(s)	202
AjiI	CACGTC	1 cut(s)	1928
AjnI	CCWGG	9 cut(s)	228, 706, 1339, 1645, 1726, 1840, 1915, 1972, 2122
AloI	GAACNNNNNNTCC	8 cut(s)	1761, 1762, 1779, 1780, 1793, 1794, 1811, 1812
Alw21I	GWGCWC	1 cut(s)	1900
Alw26I	GTCTC	6 cut(s)	164, 296, 513, 767, 1647, 1687
Alw44I	GTGCAC	1 cut(s)	1896
AlwI	GGATC	2 cut(s)	63, 407
Ama87I	CYCGRG	3 cut(s)	167, 739, 1586
AoxI	GGCC	7 cut(s)	255, 351, 659, 736, 1732, 2038, 2169
ApaLI	GTGCAC	1 cut(s)	1896
ApeKI	GCWGC	7 cut(s)	264, 382, 946, 982, 985, 1278, 1886
ApoI	RAATTY	4 cut(s)	150, 407, 420, 1390
ArsI	GACNNNNNNTTYG	2 cut(s)	1243, 1275
AseI	ATTAAT	1 cut(s)	552
AsiGI	ACCGGT	1 cut(s)	202
AspLEI	GCGC	5 cut(s)	125, 224, 329, 574, 1274
AspS9I	GGNCC	8 cut(s)	289, 351, 737, 1489, 1649, 1733, 2114, 2169
AsuC2I	CCSGG	9 cut(s)	160, 387, 494, 647, 1056, 1493, 1679, 1872, 2112
AsuHPI	GGTGA	5 cut(s)	385, 823, 1061, 1139, 1662
AsuII	TTCGAA	1 cut(s)	845
AsuNHI	GCTAGC	1 cut(s)	1322
AvaI	CYCGRG	3 cut(s)	167, 739, 1586
AvaII	GGWCC	4 cut(s)	289, 1489, 1649, 2114
BaeGI	GKGCMC	3 cut(s)	1062, 1407, 1900
BalI	TGGCCA	1 cut(s)	2040
BanI	GGYRCC	3 cut(s)	143, 221, 1059
BanII	GRGCYC	1 cut(s)	1352
BbsI	GAAGAC	1 cut(s)	459
Bbv12I	GWGCWC	1 cut(s)	1900
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	7 cut(s)	276, 369, 958, 994, 997, 1290, 1873
BceAI	ACGGC	1 cut(s)	202
BcgI	CGANNNNNNTGC	4 cut(s)	188, 222, 1263, 1297
BciT130I	CCWGG	9 cut(s)	230, 708, 1341, 1647, 1728, 1842, 1917, 1974, 2124
BcnI	CCSGG	9 cut(s)	160, 387, 494, 647, 1056, 1493, 1679, 1872, 2112
BcoDI	GTCTC	6 cut(s)	164, 296, 513, 767, 1647, 1687
BfaI	CTAG	4 cut(s)	134, 1323, 1368, 1758
BfmI	CTRYAG	1 cut(s)	2205
BfoI	RGCGCY	1 cut(s)	225
BfrI	CTTAAG	1 cut(s)	989
BglI	GCCNNNNNGGC	1 cut(s)	318
BglII	AGATCT	1 cut(s)	1991
BmcAI	AGTACT	1 cut(s)	2179
Bme18I	GGWCC	4 cut(s)	289, 1489, 1649, 2114
BmeT110I	CYCGRG	3 cut(s)	167, 739, 1586
BmgBI	CACGTC	1 cut(s)	1928
BmgT120I	GGNCC	8 cut(s)	289, 351, 737, 1489, 1649, 1733, 2114, 2169
BmrI	ACTGGG	1 cut(s)	933
BmsI	GCATC	5 cut(s)	451, 904, 1147, 1931, 2221
BmtI	GCTAGC	1 cut(s)	1326
BmuI	ACTGGG	1 cut(s)	933
BpiI	GAAGAC	1 cut(s)	459
BplI	GAGNNNNNCTC	4 cut(s)	242, 274, 1951, 1983
BpmI	CTGGAG	5 cut(s)	244, 1758, 1809, 1824, 1956
Bpu10I	CCTNAGC	1 cut(s)	294
Bpu14I	TTCGAA	1 cut(s)	845
BpuEI	CTTGAG	2 cut(s)	467, 1669
BpuMI	CCSGG	9 cut(s)	160, 387, 494, 647, 1056, 1493, 1679, 1872, 2112
BsaHI	GRCGYC	2 cut(s)	222, 321
BsaI	GGTCTC	2 cut(s)	513, 1687
BsaWI	WCCGGW	4 cut(s)	52, 140, 202, 470
BsaXI	ACNNNNNCTCC	4 cut(s)	512, 542, 2164, 2194
Bse118I	RCCGGY	3 cut(s)	202, 282, 523
Bse1I	ACTGG	6 cut(s)	781, 928, 1157, 1360, 1775, 1934
Bse3DI	GCAATG	2 cut(s)	1599, 1671
BseBI	CCWGG	9 cut(s)	230, 708, 1341, 1647, 1728, 1842, 1917, 1974, 2124
BseGI	GGATG	9 cut(s)	465, 768, 933, 961, 1138, 1192, 1336, 1551, 1709
BseMI	GCAATG	2 cut(s)	1599, 1671
BseMII	CTCAG	4 cut(s)	171, 308, 626, 1203
BseNI	ACTGG	6 cut(s)	781, 928, 1157, 1360, 1775, 1934
BseSI	GKGCMC	3 cut(s)	1062, 1407, 1900
BseXI	GCAGC	7 cut(s)	276, 369, 958, 994, 997, 1290, 1873
BseYI	CCCAGC	2 cut(s)	1313, 1713
BsgI	GTGCAG	2 cut(s)	1989, 2247
Bsh1236I	CGCG	4 cut(s)	329, 346, 574, 1001
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	7 cut(s)	257, 353, 661, 738, 1734, 2040, 2171
BshNI	GGYRCC	3 cut(s)	143, 221, 1059
BshTI	ACCGGT	1 cut(s)	202
BsiEI	CGRYCG	1 cut(s)	198
BsiHKAI	GWGCWC	1 cut(s)	1900
BsiHKCI	CYCGRG	3 cut(s)	167, 739, 1586
BsiWI	CGTACG	1 cut(s)	1166
BslFI	GGGAC	5 cut(s)	302, 738, 1027, 1237, 1388
BsmAI	GTCTC	6 cut(s)	164, 296, 513, 767, 1647, 1687
BsmBI	CGTCTC	1 cut(s)	296
BsmFI	GGGAC	5 cut(s)	302, 738, 1027, 1237, 1388
BsmI	GAATGC	2 cut(s)	1075, 1324
BsnI	GGCC	7 cut(s)	257, 353, 661, 738, 1734, 2040, 2171
Bso31I	GGTCTC	2 cut(s)	513, 1687
BsoBI	CYCGRG	3 cut(s)	167, 739, 1586
Bsp119I	TTCGAA	1 cut(s)	845
Bsp1286I	GDGCHC	4 cut(s)	1062, 1352, 1407, 1900
Bsp1407I	TGTACA	2 cut(s)	684, 1395
Bsp143I	GATC	4 cut(s)	55, 412, 487, 1991
Bsp19I	CCATGG	1 cut(s)	2165
BspANI	GGCC	7 cut(s)	257, 353, 661, 738, 1734, 2040, 2171
BspCNI	CTCAG	4 cut(s)	172, 307, 625, 1204
BspFNI	CGCG	4 cut(s)	329, 346, 574, 1001
BspMAI	CTGCAG	1 cut(s)	2209
BspOI	GCTAGC	1 cut(s)	1326
BspPI	GGATC	2 cut(s)	63, 407
BspT104I	TTCGAA	1 cut(s)	845
BspT107I	GGYRCC	3 cut(s)	143, 221, 1059
BspTI	CTTAAG	1 cut(s)	989
BspTNI	GGTCTC	2 cut(s)	513, 1687
BsrBI	CCGCTC	1 cut(s)	318
BsrDI	GCAATG	2 cut(s)	1599, 1671
BsrFI	RCCGGY	3 cut(s)	202, 282, 523
BsrGI	TGTACA	2 cut(s)	684, 1395
BsrI	ACTGG	6 cut(s)	781, 928, 1157, 1360, 1775, 1934
BssAI	RCCGGY	3 cut(s)	202, 282, 523
BssMI	GATC	4 cut(s)	55, 412, 487, 1991
BssNI	GRCGYC	2 cut(s)	222, 321
BssT1I	CCWWGG	3 cut(s)	1298, 1781, 2165
Bst2UI	CCWGG	9 cut(s)	230, 708, 1341, 1647, 1728, 1842, 1917, 1974, 2124
Bst4CI	ACNGT	4 cut(s)	23, 1747, 1895, 2225
Bst6I	CTCTTC	4 cut(s)	120, 752, 830, 1020
BstACI	GRCGYC	2 cut(s)	222, 321
BstAFI	CTTAAG	1 cut(s)	989
BstAUI	TGTACA	2 cut(s)	684, 1395
BstBI	TTCGAA	1 cut(s)	845
BstC8I	GCNNGC	6 cut(s)	1276, 1324, 1567, 1618, 1622, 1691
BstDEI	CTNAG	6 cut(s)	180, 294, 612, 783, 1212, 1245
BstDSI	CCRYGG	1 cut(s)	2165
BstENI	CCTNNNNNAGG	1 cut(s)	1839
BstF5I	GGATG	9 cut(s)	465, 768, 933, 961, 1138, 1192, 1336, 1551, 1709
BstFNI	CGCG	4 cut(s)	329, 346, 574, 1001
BstH2I	RGCGCY	1 cut(s)	225
BstHHI	GCGC	5 cut(s)	125, 224, 329, 574, 1274
BstKTI	GATC	4 cut(s)	58, 415, 490, 1994
BstMAI	GTCTC	6 cut(s)	164, 296, 513, 767, 1647, 1687
BstMBI	GATC	4 cut(s)	55, 412, 487, 1991
BstMCI	CGRYCG	1 cut(s)	198
BstNI	CCWGG	9 cut(s)	230, 708, 1341, 1647, 1728, 1842, 1917, 1974, 2124
BstNSI	RCATGY	3 cut(s)	881, 2048, 2067
BstSFI	CTRYAG	1 cut(s)	2205
BstSLI	GKGCMC	3 cut(s)	1062, 1407, 1900
BstUI	CGCG	4 cut(s)	329, 346, 574, 1001
BstV1I	GCAGC	7 cut(s)	276, 369, 958, 994, 997, 1290, 1873
BstV2I	GAAGAC	1 cut(s)	459
BstX2I	RGATCY	1 cut(s)	1991
BstXI	CCANNNNNNTGG	3 cut(s)	1697, 1782, 2153
BstYI	RGATCY	1 cut(s)	1991
BsuRI	GGCC	7 cut(s)	257, 353, 661, 738, 1734, 2040, 2171
BtgI	CCRYGG	1 cut(s)	2165
BtgZI	GCGATG	1 cut(s)	498
BtrI	CACGTC	1 cut(s)	1928
BtsCI	GGATG	9 cut(s)	465, 768, 933, 961, 1138, 1192, 1336, 1551, 1709
BtsIMutI	CAGTG	4 cut(s)	125, 1164, 1900, 1941
Cac8I	GCNNGC	6 cut(s)	1276, 1324, 1567, 1618, 1622, 1691
CfoI	GCGC	5 cut(s)	125, 224, 329, 574, 1274
Cfr10I	RCCGGY	3 cut(s)	202, 282, 523
Cfr13I	GGNCC	8 cut(s)	289, 351, 737, 1489, 1649, 1733, 2114, 2169
CseI	GACGC	1 cut(s)	310
CsiI	ACCWGGT	1 cut(s)	2122
CspAI	ACCGGT	1 cut(s)	202
CviAII	CATG	7 cut(s)	878, 1570, 1852, 2045, 2064, 2166, 2251
DdeI	CTNAG	6 cut(s)	180, 294, 612, 783, 1212, 1245
DinI	GGCGCC	1 cut(s)	223
DpnI	GATC	4 cut(s)	57, 414, 489, 1993
DpnII	GATC	4 cut(s)	55, 412, 487, 1991
EaeI	YGGCCR	1 cut(s)	2038
Eam1104I	CTCTTC	4 cut(s)	120, 752, 830, 1020
EarI	CTCTTC	4 cut(s)	120, 752, 830, 1020
EciI	GGCGGA	2 cut(s)	93, 258
Eco130I	CCWWGG	3 cut(s)	1298, 1781, 2165
Eco147I	AGGCCT	1 cut(s)	257
Eco24I	GRGCYC	1 cut(s)	1352
Eco31I	GGTCTC	2 cut(s)	513, 1687
Eco47I	GGWCC	4 cut(s)	289, 1489, 1649, 2114
Eco57I	CTGAAG	1 cut(s)	101
Eco88I	CYCGRG	3 cut(s)	167, 739, 1586
EcoNI	CCTNNNNNAGG	1 cut(s)	1839
EcoO109I	RGGNCCY	1 cut(s)	289
EcoRI	GAATTC	2 cut(s)	150, 407
EcoRII	CCWGG	9 cut(s)	228, 706, 1339, 1645, 1726, 1840, 1915, 1972, 2122
EcoT14I	CCWWGG	3 cut(s)	1298, 1781, 2165
EcoT38I	GRGCYC	1 cut(s)	1352
EgeI	GGCGCC	1 cut(s)	223
EheI	GGCGCC	1 cut(s)	223
ErhI	CCWWGG	3 cut(s)	1298, 1781, 2165
Esp3I	CGTCTC	1 cut(s)	296
FaeI	CATG	7 cut(s)	881, 1573, 1855, 2048, 2067, 2169, 2254
FaqI	GGGAC	5 cut(s)	302, 738, 1027, 1237, 1388
FatI	CATG	7 cut(s)	877, 1569, 1851, 2044, 2063, 2165, 2250
FauI	CCCGC	3 cut(s)	72, 85, 2248
FokI	GGATG	9 cut(s)	472, 775, 940, 968, 1125, 1199, 1323, 1558, 1696
FriOI	GRGCYC	1 cut(s)	1352
FspBI	CTAG	4 cut(s)	134, 1323, 1368, 1758
GlaI	GCGC	5 cut(s)	124, 223, 328, 573, 1273
GsaI	CCCAGC	2 cut(s)	1317, 1717
GsuI	CTGGAG	5 cut(s)	244, 1758, 1809, 1824, 1956
HaeII	RGCGCY	1 cut(s)	225
HaeIII	GGCC	7 cut(s)	257, 353, 661, 738, 1734, 2040, 2171
HgaI	GACGC	1 cut(s)	310
HhaI	GCGC	5 cut(s)	125, 224, 329, 574, 1274
Hin1I	GRCGYC	2 cut(s)	222, 321
Hin1II	CATG	7 cut(s)	881, 1573, 1855, 2048, 2067, 2169, 2254
Hin6I	GCGC	5 cut(s)	123, 222, 327, 572, 1272
HinP1I	GCGC	5 cut(s)	123, 222, 327, 572, 1272
HincII	GTYRAC	2 cut(s)	1306, 1877
HindII	GTYRAC	2 cut(s)	1306, 1877
HindIII	AAGCTT	2 cut(s)	426, 668
HinfI	GANTC	6 cut(s)	112, 163, 191, 376, 842, 1235
HpaI	GTTAAC	1 cut(s)	1306
HphI	GGTGA	5 cut(s)	385, 823, 1061, 1139, 1662
Hpy166II	GTNNAC	3 cut(s)	1306, 1877, 1898
Hpy188I	TCNGA	7 cut(s)	88, 615, 862, 1068, 1545, 1610, 1987
Hpy188III	TCNNGA	6 cut(s)	59, 167, 416, 446, 1083, 1421
Hpy8I	GTNNAC	3 cut(s)	1306, 1877, 1898
HpyAV	CCTTC	4 cut(s)	117, 491, 763, 1869
HpyCH4III	ACNGT	4 cut(s)	23, 1747, 1895, 2225
HpyCH4IV	ACGT	4 cut(s)	1094, 1453, 1927, 1940
HpyF3I	CTNAG	6 cut(s)	180, 294, 612, 783, 1212, 1245
HpySE526I	ACGT	4 cut(s)	1094, 1453, 1927, 1940
Hsp92I	GRCGYC	2 cut(s)	222, 321
Hsp92II	CATG	7 cut(s)	881, 1573, 1855, 2048, 2067, 2169, 2254
HspAI	GCGC	5 cut(s)	123, 222, 327, 572, 1272
KasI	GGCGCC	1 cut(s)	221
KflI	GGGWCCC	1 cut(s)	289
KspAI	GTTAAC	1 cut(s)	1306
Kzo9I	GATC	4 cut(s)	55, 412, 487, 1991
LmnI	GCTCC	5 cut(s)	106, 279, 361, 520, 1834
Lsp1109I	GCAGC	7 cut(s)	276, 369, 958, 994, 997, 1290, 1873
LweI	GCATC	5 cut(s)	451, 904, 1147, 1931, 2221
MabI	ACCWGGT	1 cut(s)	2122
MaeI	CTAG	4 cut(s)	134, 1323, 1368, 1758
MaeII	ACGT	4 cut(s)	1094, 1453, 1927, 1940
MaeIII	GTNAC	4 cut(s)	23, 1080, 1668, 1936
MalI	GATC	4 cut(s)	57, 414, 489, 1993
MbiI	CCGCTC	1 cut(s)	318
MboI	GATC	4 cut(s)	55, 412, 487, 1991
MboII	GAAGA	8 cut(s)	107, 459, 769, 847, 1037, 1189, 2180, 2193
MfeI	CAATTG	1 cut(s)	1560
MflI	RGATCY	1 cut(s)	1991
MhlI	GDGCHC	4 cut(s)	1062, 1352, 1407, 1900
MlsI	TGGCCA	1 cut(s)	2040
MluNI	TGGCCA	1 cut(s)	2040
Mly113I	GGCGCC	1 cut(s)	222
MlyI	GAGTC	2 cut(s)	106, 185
MmeI	TCCRAC	1 cut(s)	37
Mox20I	TGGCCA	1 cut(s)	2040
MscI	TGGCCA	1 cut(s)	2040
MseI	TTAA	8 cut(s)	552, 621, 639, 990, 1098, 1305, 1485, 1943
MslI	CAYNNNNRTG	3 cut(s)	692, 1068, 2062
Msp20I	TGGCCA	1 cut(s)	2040
MspA1I	CMGCKG	1 cut(s)	382
MspCI	CTTAAG	1 cut(s)	989
MunI	CAATTG	1 cut(s)	1560
Mva1269I	GAATGC	2 cut(s)	1075, 1324
MvaI	CCWGG	9 cut(s)	230, 708, 1341, 1647, 1728, 1842, 1917, 1974, 2124
MvnI	CGCG	4 cut(s)	329, 346, 574, 1001
NarI	GGCGCC	1 cut(s)	222
NciI	CCSGG	9 cut(s)	160, 387, 494, 647, 1056, 1493, 1679, 1872, 2112
NcoI	CCATGG	1 cut(s)	2165
NdeII	GATC	4 cut(s)	55, 412, 487, 1991
NheI	GCTAGC	1 cut(s)	1322
NlaIII	CATG	7 cut(s)	881, 1573, 1855, 2048, 2067, 2169, 2254
NmuCI	GTSAC	3 cut(s)	1080, 1668, 1936
NspI	RCATGY	3 cut(s)	881, 2048, 2067
NspV	TTCGAA	1 cut(s)	845
PaeR7I	CTCGAG	1 cut(s)	1586
PceI	AGGCCT	1 cut(s)	257
PctI	GAATGC	2 cut(s)	1075, 1324
PfeI	GAWTC	4 cut(s)	163, 376, 842, 1235
Pfl23II	CGTACG	1 cut(s)	1166
PflMI	CCANNNNNTGG	1 cut(s)	2036
PfoI	TCCNGGA	3 cut(s)	158, 1339, 1645
PinAI	ACCGGT	1 cut(s)	202
PleI	GAGTC	2 cut(s)	106, 185
PluTI	GGCGCC	1 cut(s)	225
PpsI	GAGTC	2 cut(s)	106, 185
PpuMI	RGGWCCY	1 cut(s)	289
PshBI	ATTAAT	1 cut(s)	552
Psp1406I	AACGTT	1 cut(s)	1094
Psp5II	RGGWCCY	1 cut(s)	289
Psp6I	CCWGG	9 cut(s)	228, 706, 1339, 1645, 1726, 1840, 1915, 1972, 2122
PspFI	CCCAGC	2 cut(s)	1313, 1713
PspGI	CCWGG	9 cut(s)	228, 706, 1339, 1645, 1726, 1840, 1915, 1972, 2122
PspLI	CGTACG	1 cut(s)	1166
PspPI	GGNCC	8 cut(s)	289, 351, 737, 1489, 1649, 1733, 2114, 2169
PspPPI	RGGWCCY	1 cut(s)	289
PspXI	VCTCGAGB	1 cut(s)	1586
PsrI	GAACNNNNNNTAC	2 cut(s)	2231, 2263
PstI	CTGCAG	1 cut(s)	2209
PsuI	RGATCY	1 cut(s)	1991
PvuII	CAGCTG	1 cut(s)	382
RseI	CAYNNNNRTG	3 cut(s)	692, 1068, 2062
SaqAI	TTAA	8 cut(s)	552, 621, 639, 990, 1098, 1305, 1485, 1943
Sau3AI	GATC	4 cut(s)	55, 412, 487, 1991
Sau96I	GGNCC	8 cut(s)	289, 351, 737, 1489, 1649, 1733, 2114, 2169
ScaI	AGTACT	1 cut(s)	2179
SchI	GAGTC	2 cut(s)	106, 185
SduI	GDGCHC	4 cut(s)	1062, 1352, 1407, 1900
SexAI	ACCWGGT	1 cut(s)	2122
SfaNI	GCATC	5 cut(s)	451, 904, 1147, 1931, 2221
SfcI	CTRYAG	1 cut(s)	2205
SfoI	GGCGCC	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	1586
SfuI	TTCGAA	1 cut(s)	845
SinI	GGWCC	4 cut(s)	289, 1489, 1649, 2114
SlaI	CTCGAG	1 cut(s)	1586
SmiMI	CAYNNNNRTG	3 cut(s)	692, 1068, 2062
SmlI	CTYRAG	4 cut(s)	446, 989, 1586, 1684
SmoI	CTYRAG	4 cut(s)	446, 989, 1586, 1684
SseBI	AGGCCT	1 cut(s)	257
SspDI	GGCGCC	1 cut(s)	221
SspI	AATATT	1 cut(s)	1465
SspMI	CTAG	4 cut(s)	134, 1323, 1368, 1758
StuI	AGGCCT	1 cut(s)	257
StyI	CCWWGG	3 cut(s)	1298, 1781, 2165
TaaI	ACNGT	4 cut(s)	23, 1747, 1895, 2225
TaiI	ACGT	4 cut(s)	1097, 1456, 1930, 1943
TaqI	TCGA	7 cut(s)	110, 194, 411, 845, 888, 1587, 1594
TaqII	GACCGA	1 cut(s)	212
TatI	WGTACW	4 cut(s)	684, 1328, 1395, 2177
TauI	GCSGC	6 cut(s)	270, 273, 276, 321, 664, 920
TfiI	GAWTC	4 cut(s)	163, 376, 842, 1235
Tru1I	TTAA	8 cut(s)	552, 621, 639, 990, 1098, 1305, 1485, 1943
Tru9I	TTAA	8 cut(s)	552, 621, 639, 990, 1098, 1305, 1485, 1943
TscAI	CASTG	4 cut(s)	125, 1164, 1900, 1941
TseFI	GTSAC	3 cut(s)	1080, 1668, 1936
TseI	GCWGC	7 cut(s)	264, 382, 946, 982, 985, 1278, 1886
Tsp45I	GTSAC	3 cut(s)	1080, 1668, 1936
TspDTI	ATGAA	3 cut(s)	63, 1586, 2239
TspGWI	ACGGA	1 cut(s)	320
TspRI	CASTG	4 cut(s)	125, 1164, 1900, 1941
Van91I	CCANNNNNTGG	1 cut(s)	2036
Vha464I	CTTAAG	1 cut(s)	989
VneI	GTGCAC	1 cut(s)	1896
VpaK11BI	GGWCC	4 cut(s)	289, 1489, 1649, 2114
VspI	ATTAAT	1 cut(s)	552
XagI	CCTNNNNNAGG	1 cut(s)	1839
XapI	RAATTY	4 cut(s)	150, 407, 420, 1390
XceI	RCATGY	3 cut(s)	881, 2048, 2067
XhoI	CTCGAG	1 cut(s)	1586
XspI	CTAG	4 cut(s)	134, 1323, 1368, 1758
ZrmI	AGTACT	1 cut(s)	2179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.