Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Forward (+)

55346949 .. 55349650

Gene Structure 2702 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019679

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGGGAACTCTCCAACCAAGCCCTAATCCTCCTCCCATCGACGATGATGAACCGGATCACGACCAGCCTTATTTTCCCGCCATTTCCGAAATCCCAATCCCGCTCTCAGATTTAAAGCCTCCTCGTTCGCCTCTTCAGTGCGCTCAAACCCTAGCTTCCGGTGCCGGAATTCCCTCCCGGAATCCCGAGACTTCTACTGAGAACGGCGACTCGACCAGACCGGTTGCTAATGGCTTCGCCAACACGCACTTCGGCGCCGACAGGGACTTCTCCGACGGAGAGGAGGAGGCCTCCGGCAGCCGCAGCCGCCGCAGCCGGTGGGACCCCCAGCCGGAAACGGAAAGCCAGAGCGGCGTCGGCGAGAGGAGGAGGAAGTCGTGGTGGGCCGATGAGGAGCCGAAGCCGGTGATTCAGCTGCCGGGGTTCATGGGAGGTATTGAATTCGATCCTGAAATTCAAGCTTTGAATAGTAGGCATCTTGAGATTAGTAGGATGTTGTCTTCCGGTTTGCCTTTAGATGATCGCCCGGAAGGGGATAGGTCTCCGTCGCCGGAGCCGGTGTATGATAACTTTGGAATTAGGATTAATACAAGAGAGTTTCGTGCGCGTGAGAGGTTGAACAAAGAGAGGCAGGAAATTATTACTCAGATTATTAAGAGGAACCCTACATTCAAGCCTCCGGCGGATTACTGGCCGCCCAAGCTTCACAAGAAGCTGTACATACCCGTGAAAGAGTACCCTGGTTATAGTTTTATAGGACTTATCATTGGCCCGAGGGGGAATACCCAGAAGAGGATGGAGAAGGAGACTGGTGCTAAGATTGTCATTAGGGGTAGAGGGTCGGAGGCTGTTGATGCCGCAGCTGGGATGGTAGAGAAGCTGTTGCAGCCTGTGGATGAGGTGTTGAATGAGCATAAGAGGCAGCAGCTTAAGGAACTCGCGTTGTTGAATGGGACTATTAGGGAAGAGGAGTTTTGTAGGTTATGTGGTGAGCCAGGGCACCATCAGAATGCCTGTCCCTCACGAACTTCAACGTTTAAGAGCGATGTTCTTTGTAAGATATGTGGTGATGGTGGGCATCCAACTATTGATTGTCCAGTAAAGTGTACGAATGGGAAGAAAATGGATGATGAGTACCTGAACTTTTTGGCTGAGTTAGGTGGGAAAATGCCTGAATCAGCAACTAAGCAGACAGCTACTTTGGCTTTTGGCGCAGGCAGTTCAGTAAGCAGTCCTCGTTGGGTTAACAATGCTGGGAATGCTAGCAGTACAGCACATCCAGGATTGGGCTCAACTGGATTGAAGCCTAGCAGGGAATATGATGACACAAATTTGTATATTGGACACTTGCCACCTACTCTTGATGATGATGGTTTGATCAGGTTGTTTTCATGTTTCGGTAATATTGTGATGTGCAAAGTTATTAAGGACCGGGCTACTGGATTGAGTAAAGGTTATGGATTTGTGAAGTACGCTTATGTTCAGATGGCTAATAGTGCAATTGCAAGCATGAATGGTTTTTCCCTCGAGGGTCGAACCATTGCTGTCAGAGTTGCTGGCAAGCCTCAGCAGCCTGTTGTGTCTCCTGGACCACCAGCTTCAGCAATGTCACCACACCTGGTCTCAAGCCAGCCTGTTGGTGCTTATCCATCCCAGCAATGTACCCCAGGTGGCCATCTTTGGACTGTACCATCTACTAGCTATGCAGGAACTCCAGTTCCTTGGGGACCCCCTGTTCCTCCTCCGTATTCTCCTTATGCTTCTCCACCTCCCCCTCCTCCAGGTTCAACCATGTATCCTCCTCCCACGCTGGGTCAACCTATGGCTGCTTACAGTACACAATACCCTCCTCCTCCTGGTGCATCACCTCAGCCAGTGACGTTAAGTGAAGCACAACAGAGTTATCCTCCTCCAGGGGTTCAATCTGAAAGATCTACCCAATCTGCACCAACTAATATATACACGATGCCAACAAATGGCCAACATGCTTATTCTACATCTGCATATGGTTACCCATCCTACTACAATGCAGTTCCACCACCTCCTGCCCCCAGACCTGTACCTGGTTCAACTGCATACCAATCCCAGAGCATTGGTAATGTGCCATGGGCCACAAGTACTCCTTTTCTTCCTCCTACTTCTTCTGCAGATAAAGCAACTCACGGTGCAGATGCAGAGTGTGAGAAGTTCATGGCGGAGATGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

736

Amino Acids

79.52

Weight (kDa)

6.21

Isoelectric Point (pI)

63.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	151 - 230	2e-23	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	245 - 288	4.9e-13	KHDC4/BBP-like, KH-domain type I
KH_1	PF00013	250 - 279	9e-06	KH domain
RRM_1	PF00076	445 - 514	3.2e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1526
AccB1I	GGYRCC	3 cut(s)	161, 254, 999
AccB7I	CCANNNNNTGG	1 cut(s)	1976
AccBSI	CCGCTC	2 cut(s)	103, 351
AccII	CGCG	2 cut(s)	607, 941
AclI	AACGTT	1 cut(s)	1034
AclWI	GGATC	2 cut(s)	63, 440
AcoI	YGGCCR	3 cut(s)	692, 1672, 1978
AcsI	RAATTY	4 cut(s)	168, 440, 453, 1330
AcuI	CTGAAG	2 cut(s)	119, 1584
AcyI	GRCGYC	2 cut(s)	255, 354
AflII	CTTAAG	1 cut(s)	929
AgeI	ACCGGT	1 cut(s)	220
AjuI	GAANNNNNNNTTGG	2 cut(s)	233, 265
AloI	GAACNNNNNNTCC	6 cut(s)	1701, 1702, 1719, 1733, 1734, 1751
Alw26I	GTCTC	5 cut(s)	182, 546, 800, 1587, 1627
AlwI	GGATC	2 cut(s)	63, 440
Ama87I	CYCGRG	3 cut(s)	185, 772, 1526
AoxI	GGCC	7 cut(s)	288, 384, 692, 769, 1672, 1978, 2109
ApoI	RAATTY	4 cut(s)	168, 440, 453, 1330
ArsI	GACNNNNNNTTYG	2 cut(s)	1183, 1215
AseI	ATTAAT	1 cut(s)	585
AsiGI	ACCGGT	1 cut(s)	220
AspLEI	GCGC	4 cut(s)	143, 257, 607, 1214
AspS9I	GGNCC	7 cut(s)	322, 384, 770, 1429, 1589, 1727, 2109
AsuC2I	CCSGG	4 cut(s)	178, 420, 527, 1433
AsuHPI	GGTGA	5 cut(s)	418, 1001, 1079, 1602, 1857
AsuNHI	GCTAGC	1 cut(s)	1262
AvaI	CYCGRG	3 cut(s)	185, 772, 1526
AvaII	GGWCC	4 cut(s)	322, 1429, 1589, 1727
BaeGI	GKGCMC	1 cut(s)	1002
BalI	TGGCCA	2 cut(s)	1674, 1980
BanI	GGYRCC	3 cut(s)	161, 254, 999
BanII	GRGCYC	1 cut(s)	1292
BbsI	GAAGAC	1 cut(s)	492
BbvCI	CCTCAGC	2 cut(s)	1566, 1869
BceAI	ACGGC	1 cut(s)	220
BciVI	GTATCC	1 cut(s)	1806
BclI	TGATCA	1 cut(s)	1377
BcnI	CCSGG	4 cut(s)	178, 420, 527, 1433
BcoDI	GTCTC	5 cut(s)	182, 546, 800, 1587, 1627
BfaI	CTAG	4 cut(s)	152, 1263, 1308, 1698
BfmI	CTRYAG	1 cut(s)	2145
BfoI	RGCGCY	1 cut(s)	258
BfrI	CTTAAG	1 cut(s)	929
BfuI	GTATCC	1 cut(s)	1806
BglI	GCCNNNNNGGC	1 cut(s)	351
BglII	AGATCT	1 cut(s)	1931
BmcAI	AGTACT	1 cut(s)	2119
Bme18I	GGWCC	4 cut(s)	322, 1429, 1589, 1727
BmeT110I	CYCGRG	3 cut(s)	185, 772, 1526
BmgT120I	GGNCC	7 cut(s)	322, 384, 770, 1429, 1589, 1727, 2109
BmsI	GCATC	6 cut(s)	484, 844, 1087, 1871, 1956, 2161
BmtI	GCTAGC	1 cut(s)	1266
BpiI	GAAGAC	1 cut(s)	492
BplI	GAGNNNNNCTC	4 cut(s)	275, 307, 1891, 1923
BpmI	CTGGAG	3 cut(s)	1698, 1764, 1896
Bpu10I	CCTNAGC	2 cut(s)	1566, 1869
BpuEI	CTTGAG	2 cut(s)	500, 1609
BpuMI	CCSGG	4 cut(s)	178, 420, 527, 1433
BsaHI	GRCGYC	2 cut(s)	255, 354
BsaI	GGTCTC	2 cut(s)	546, 1627
BsaJI	CCNNGG	8 cut(s)	419, 739, 773, 995, 1666, 1721, 1913, 2105
BsaWI	WCCGGW	4 cut(s)	52, 158, 220, 503
BsaXI	ACNNNNNCTCC	4 cut(s)	545, 575, 2104, 2134
Bse118I	RCCGGY	4 cut(s)	220, 315, 403, 556
Bse1I	ACTGG	7 cut(s)	695, 814, 1097, 1300, 1444, 1715, 1874
Bse3DI	GCAATG	3 cut(s)	1539, 1611, 1664
BseDI	CCNNGG	8 cut(s)	419, 739, 773, 995, 1666, 1721, 1913, 2105
BseGI	GGATG	9 cut(s)	498, 801, 873, 901, 1078, 1132, 1276, 1649, 2015
BseMI	GCAATG	3 cut(s)	1539, 1611, 1664
BseMII	CTCAG	6 cut(s)	120, 189, 659, 1143, 1580, 1883
BseNI	ACTGG	7 cut(s)	695, 814, 1097, 1300, 1444, 1715, 1874
BseSI	GKGCMC	1 cut(s)	1002
BseYI	CCCAGC	5 cut(s)	327, 863, 1253, 1653, 1810
BsgI	GTGCAG	2 cut(s)	1929, 2187
Bsh1236I	CGCG	2 cut(s)	607, 941
BshFI	GGCC	7 cut(s)	290, 386, 694, 771, 1674, 1980, 2111
BshNI	GGYRCC	3 cut(s)	161, 254, 999
BshTI	ACCGGT	1 cut(s)	220
BsiHKCI	CYCGRG	3 cut(s)	185, 772, 1526
BslFI	GGGAC	5 cut(s)	278, 335, 967, 1002, 1740
BsmAI	GTCTC	5 cut(s)	182, 546, 800, 1587, 1627
BsmFI	GGGAC	5 cut(s)	278, 335, 967, 1002, 1740
BsmI	GAATGC	2 cut(s)	1015, 1264
BsnI	GGCC	7 cut(s)	290, 386, 694, 771, 1674, 1980, 2111
Bso31I	GGTCTC	2 cut(s)	546, 1627
BsoBI	CYCGRG	3 cut(s)	185, 772, 1526
Bsp1286I	GDGCHC	2 cut(s)	1002, 1292
Bsp1407I	TGTACA	1 cut(s)	717
Bsp143I	GATC	5 cut(s)	55, 445, 520, 1377, 1931
Bsp19I	CCATGG	1 cut(s)	2105
BspANI	GGCC	7 cut(s)	290, 386, 694, 771, 1674, 1980, 2111
BspCNI	CTCAG	6 cut(s)	119, 190, 658, 1144, 1579, 1882
BspFNI	CGCG	2 cut(s)	607, 941
BspMAI	CTGCAG	1 cut(s)	2149
BspOI	GCTAGC	1 cut(s)	1266
BspPI	GGATC	2 cut(s)	63, 440
BspT107I	GGYRCC	3 cut(s)	161, 254, 999
BspTI	CTTAAG	1 cut(s)	929
BspTNI	GGTCTC	2 cut(s)	546, 1627
BsrBI	CCGCTC	2 cut(s)	103, 351
BsrDI	GCAATG	3 cut(s)	1539, 1611, 1664
BsrFI	RCCGGY	4 cut(s)	220, 315, 403, 556
BsrGI	TGTACA	1 cut(s)	717
BsrI	ACTGG	7 cut(s)	695, 814, 1097, 1300, 1444, 1715, 1874
BssAI	RCCGGY	4 cut(s)	220, 315, 403, 556
BssECI	CCNNGG	8 cut(s)	419, 739, 773, 995, 1666, 1721, 1913, 2105
BssMI	GATC	5 cut(s)	55, 445, 520, 1377, 1931
BssNI	GRCGYC	2 cut(s)	255, 354
BssT1I	CCWWGG	2 cut(s)	1721, 2105
Bst4CI	ACNGT	3 cut(s)	1687, 1835, 2165
Bst6I	CTCTTC	3 cut(s)	138, 785, 960
BstACI	GRCGYC	2 cut(s)	255, 354
BstAFI	CTTAAG	1 cut(s)	929
BstAUI	TGTACA	1 cut(s)	717
BstC8I	GCNNGC	6 cut(s)	1216, 1264, 1507, 1558, 1562, 1631
BstDEI	CTNAG	8 cut(s)	106, 198, 645, 816, 1152, 1185, 1566, 1869
BstDSI	CCRYGG	1 cut(s)	2105
BstEII	GGTNACC	1 cut(s)	2009
BstENI	CCTNNNNNAGG	2 cut(s)	1779, 1911
BstF5I	GGATG	9 cut(s)	498, 801, 873, 901, 1078, 1132, 1276, 1649, 2015
BstFNI	CGCG	2 cut(s)	607, 941
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	4 cut(s)	143, 257, 607, 1214
BstKTI	GATC	5 cut(s)	58, 448, 523, 1380, 1934
BstMAI	GTCTC	5 cut(s)	182, 546, 800, 1587, 1627
BstMBI	GATC	5 cut(s)	55, 445, 520, 1377, 1931
BstNSI	RCATGY	1 cut(s)	1988
BstPI	GGTNACC	1 cut(s)	2009
BstSFI	CTRYAG	1 cut(s)	2145
BstSLI	GKGCMC	1 cut(s)	1002
BstUI	CGCG	2 cut(s)	607, 941
BstV2I	GAAGAC	1 cut(s)	492
BstX2I	RGATCY	1 cut(s)	1931
BstXI	CCANNNNNNTGG	3 cut(s)	1637, 1722, 2093
BstYI	RGATCY	1 cut(s)	1931
BsuI	GTATCC	1 cut(s)	1806
BsuRI	GGCC	7 cut(s)	290, 386, 694, 771, 1674, 1980, 2111
BtgI	CCRYGG	1 cut(s)	2105
BtgZI	GCGATG	1 cut(s)	1059
BtsCI	GGATG	9 cut(s)	498, 801, 873, 901, 1078, 1132, 1276, 1649, 2015
BtsIMutI	CAGTG	2 cut(s)	143, 1881
Cac8I	GCNNGC	6 cut(s)	1216, 1264, 1507, 1558, 1562, 1631
CfoI	GCGC	4 cut(s)	143, 257, 607, 1214
Cfr10I	RCCGGY	4 cut(s)	220, 315, 403, 556
Cfr13I	GGNCC	7 cut(s)	322, 384, 770, 1429, 1589, 1727, 2109
CseI	GACGC	1 cut(s)	343
CsiI	ACCWGGT	2 cut(s)	1617, 2062
CspAI	ACCGGT	1 cut(s)	220
CviAII	CATG	7 cut(s)	427, 1392, 1510, 1792, 1985, 2106, 2191
DdeI	CTNAG	8 cut(s)	106, 198, 645, 816, 1152, 1185, 1566, 1869
DinI	GGCGCC	1 cut(s)	256
DpnI	GATC	5 cut(s)	57, 447, 522, 1379, 1933
DpnII	GATC	5 cut(s)	55, 445, 520, 1377, 1931
DraI	TTTAAA	1 cut(s)	114
EaeI	YGGCCR	3 cut(s)	692, 1672, 1978
Eam1104I	CTCTTC	3 cut(s)	138, 785, 960
EarI	CTCTTC	3 cut(s)	138, 785, 960
EciI	GGCGGA	1 cut(s)	698
Eco130I	CCWWGG	2 cut(s)	1721, 2105
Eco147I	AGGCCT	1 cut(s)	290
Eco24I	GRGCYC	1 cut(s)	1292
Eco31I	GGTCTC	2 cut(s)	546, 1627
Eco47I	GGWCC	4 cut(s)	322, 1429, 1589, 1727
Eco57I	CTGAAG	2 cut(s)	119, 1584
Eco88I	CYCGRG	3 cut(s)	185, 772, 1526
Eco91I	GGTNACC	1 cut(s)	2009
EcoNI	CCTNNNNNAGG	2 cut(s)	1779, 1911
EcoO109I	RGGNCCY	2 cut(s)	322, 1727
EcoO65I	GGTNACC	1 cut(s)	2009
EcoRI	GAATTC	2 cut(s)	168, 440
EcoT14I	CCWWGG	2 cut(s)	1721, 2105
EcoT38I	GRGCYC	1 cut(s)	1292
EgeI	GGCGCC	1 cut(s)	256
EheI	GGCGCC	1 cut(s)	256
ErhI	CCWWGG	2 cut(s)	1721, 2105
FaeI	CATG	7 cut(s)	430, 1395, 1513, 1795, 1988, 2109, 2194
FalI	AAGNNNNNCTT	2 cut(s)	2107, 2139
FaqI	GGGAC	5 cut(s)	278, 335, 967, 1002, 1740
FatI	CATG	7 cut(s)	426, 1391, 1509, 1791, 1984, 2105, 2190
FauI	CCCGC	2 cut(s)	85, 108
FauNDI	CATATG	1 cut(s)	2005
FbaI	TGATCA	1 cut(s)	1377
FokI	GGATG	9 cut(s)	505, 808, 880, 908, 1065, 1139, 1263, 1636, 2002
FriOI	GRGCYC	1 cut(s)	1292
FspBI	CTAG	4 cut(s)	152, 1263, 1308, 1698
GlaI	GCGC	4 cut(s)	142, 256, 606, 1213
GsaI	CCCAGC	5 cut(s)	331, 867, 1257, 1657, 1814
GsuI	CTGGAG	3 cut(s)	1698, 1764, 1896
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	7 cut(s)	290, 386, 694, 771, 1674, 1980, 2111
HgaI	GACGC	1 cut(s)	343
HhaI	GCGC	4 cut(s)	143, 257, 607, 1214
Hin1I	GRCGYC	2 cut(s)	255, 354
Hin1II	CATG	7 cut(s)	430, 1395, 1513, 1795, 1988, 2109, 2194
Hin6I	GCGC	4 cut(s)	141, 255, 605, 1212
HinP1I	GCGC	4 cut(s)	141, 255, 605, 1212
HincII	GTYRAC	2 cut(s)	1246, 1817
HindII	GTYRAC	2 cut(s)	1246, 1817
HindIII	AAGCTT	2 cut(s)	459, 701
HinfI	GANTC	4 cut(s)	181, 209, 409, 1175
HpaI	GTTAAC	1 cut(s)	1246
HphI	GGTGA	5 cut(s)	418, 1001, 1079, 1602, 1857
Hpy166II	GTNNAC	4 cut(s)	1107, 1246, 1817, 1838
Hpy188I	TCNGA	9 cut(s)	88, 109, 274, 648, 844, 1008, 1485, 1550, 1927
Hpy188III	TCNNGA	6 cut(s)	59, 185, 449, 479, 1023, 1361
Hpy8I	GTNNAC	4 cut(s)	1107, 1246, 1817, 1838
Hpy99I	CGWCG	4 cut(s)	44, 278, 359, 550
HpyAV	CCTTC	2 cut(s)	524, 796
HpyCH4III	ACNGT	3 cut(s)	1687, 1835, 2165
HpyCH4IV	ACGT	2 cut(s)	1034, 1880
HpyF3I	CTNAG	8 cut(s)	106, 198, 645, 816, 1152, 1185, 1566, 1869
HpySE526I	ACGT	2 cut(s)	1034, 1880
Hsp92I	GRCGYC	2 cut(s)	255, 354
Hsp92II	CATG	7 cut(s)	430, 1395, 1513, 1795, 1988, 2109, 2194
HspAI	GCGC	4 cut(s)	141, 255, 605, 1212
KasI	GGCGCC	1 cut(s)	254
KflI	GGGWCCC	2 cut(s)	322, 1727
Ksp22I	TGATCA	1 cut(s)	1377
KspAI	GTTAAC	1 cut(s)	1246
Kzo9I	GATC	5 cut(s)	55, 445, 520, 1377, 1931
LmnI	GCTCC	2 cut(s)	394, 553
LweI	GCATC	6 cut(s)	484, 844, 1087, 1871, 1956, 2161
MabI	ACCWGGT	2 cut(s)	1617, 2062
MaeI	CTAG	4 cut(s)	152, 1263, 1308, 1698
MaeII	ACGT	2 cut(s)	1034, 1880
MaeIII	GTNAC	3 cut(s)	1608, 1876, 2009
MalI	GATC	5 cut(s)	57, 447, 522, 1379, 1933
MbiI	CCGCTC	2 cut(s)	103, 351
MboI	GATC	5 cut(s)	55, 445, 520, 1377, 1931
MboII	GAAGA	7 cut(s)	125, 492, 802, 977, 1129, 2120, 2133
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	1 cut(s)	1931
MhlI	GDGCHC	2 cut(s)	1002, 1292
MlsI	TGGCCA	2 cut(s)	1674, 1980
MluCI	AATT	7 cut(s)	168, 440, 453, 576, 636, 1330, 1500
MluNI	TGGCCA	2 cut(s)	1674, 1980
Mly113I	GGCGCC	1 cut(s)	255
MlyI	GAGTC	1 cut(s)	203
MmeI	TCCRAC	4 cut(s)	37, 297, 822, 1106
Mox20I	TGGCCA	2 cut(s)	1674, 1980
MscI	TGGCCA	2 cut(s)	1674, 1980
MseI	TTAA	8 cut(s)	113, 585, 654, 930, 1038, 1245, 1425, 1883
MslI	CAYNNNNRTG	2 cut(s)	725, 1008
Msp20I	TGGCCA	2 cut(s)	1674, 1980
MspA1I	CMGCKG	2 cut(s)	415, 863
MspCI	CTTAAG	1 cut(s)	929
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	2 cut(s)	1015, 1264
MvnI	CGCG	2 cut(s)	607, 941
NarI	GGCGCC	1 cut(s)	255
NciI	CCSGG	4 cut(s)	178, 420, 527, 1433
NcoI	CCATGG	1 cut(s)	2105
NdeI	CATATG	1 cut(s)	2005
NdeII	GATC	5 cut(s)	55, 445, 520, 1377, 1931
NheI	GCTAGC	1 cut(s)	1262
NlaIII	CATG	7 cut(s)	430, 1395, 1513, 1795, 1988, 2109, 2194
NmuCI	GTSAC	2 cut(s)	1608, 1876
NspI	RCATGY	1 cut(s)	1988
PaeR7I	CTCGAG	1 cut(s)	1526
PceI	AGGCCT	1 cut(s)	290
PctI	GAATGC	2 cut(s)	1015, 1264
PfeI	GAWTC	3 cut(s)	181, 409, 1175
PflMI	CCANNNNNTGG	1 cut(s)	1976
PfoI	TCCNGGA	3 cut(s)	176, 1279, 1585
PinAI	ACCGGT	1 cut(s)	220
PleI	GAGTC	1 cut(s)	203
PluTI	GGCGCC	1 cut(s)	258
PpsI	GAGTC	1 cut(s)	203
PpuMI	RGGWCCY	2 cut(s)	322, 1727
PshBI	ATTAAT	1 cut(s)	585
Psp1406I	AACGTT	1 cut(s)	1034
Psp5II	RGGWCCY	2 cut(s)	322, 1727
PspEI	GGTNACC	1 cut(s)	2009
PspFI	CCCAGC	5 cut(s)	327, 863, 1253, 1653, 1810
PspPI	GGNCC	7 cut(s)	322, 384, 770, 1429, 1589, 1727, 2109
PspPPI	RGGWCCY	2 cut(s)	322, 1727
PspXI	VCTCGAGB	1 cut(s)	1526
PstI	CTGCAG	1 cut(s)	2149
PsuI	RGATCY	1 cut(s)	1931
PvuII	CAGCTG	2 cut(s)	415, 863
RseI	CAYNNNNRTG	2 cut(s)	725, 1008
SaqAI	TTAA	8 cut(s)	113, 585, 654, 930, 1038, 1245, 1425, 1883
Sau3AI	GATC	5 cut(s)	55, 445, 520, 1377, 1931
Sau96I	GGNCC	7 cut(s)	322, 384, 770, 1429, 1589, 1727, 2109
ScaI	AGTACT	1 cut(s)	2119
SchI	GAGTC	1 cut(s)	203
SduI	GDGCHC	2 cut(s)	1002, 1292
SexAI	ACCWGGT	2 cut(s)	1617, 2062
SfaNI	GCATC	6 cut(s)	484, 844, 1087, 1871, 1956, 2161
SfcI	CTRYAG	1 cut(s)	2145
SfoI	GGCGCC	1 cut(s)	256
Sfr274I	CTCGAG	1 cut(s)	1526
SinI	GGWCC	4 cut(s)	322, 1429, 1589, 1727
SlaI	CTCGAG	1 cut(s)	1526
SmiMI	CAYNNNNRTG	2 cut(s)	725, 1008
SmlI	CTYRAG	4 cut(s)	479, 929, 1526, 1624
SmoI	CTYRAG	4 cut(s)	479, 929, 1526, 1624
Sse9I	AATT	7 cut(s)	168, 440, 453, 576, 636, 1330, 1500
SseBI	AGGCCT	1 cut(s)	290
SspDI	GGCGCC	1 cut(s)	254
SspI	AATATT	1 cut(s)	1405
SspMI	CTAG	4 cut(s)	152, 1263, 1308, 1698
StuI	AGGCCT	1 cut(s)	290
StyI	CCWWGG	2 cut(s)	1721, 2105
TaaI	ACNGT	3 cut(s)	1687, 1835, 2165
TaiI	ACGT	2 cut(s)	1037, 1883
TaqI	TCGA	5 cut(s)	39, 212, 444, 1527, 1534
TasI	AATT	7 cut(s)	168, 440, 453, 576, 636, 1330, 1500
TatI	WGTACW	4 cut(s)	717, 1268, 1835, 2117
TauI	GCSGC	6 cut(s)	303, 309, 312, 354, 697, 860
TfiI	GAWTC	3 cut(s)	181, 409, 1175
Tru1I	TTAA	8 cut(s)	113, 585, 654, 930, 1038, 1245, 1425, 1883
Tru9I	TTAA	8 cut(s)	113, 585, 654, 930, 1038, 1245, 1425, 1883
TscAI	CASTG	2 cut(s)	143, 1881
TseFI	GTSAC	2 cut(s)	1608, 1876
Tsp45I	GTSAC	2 cut(s)	1608, 1876
TspDTI	ATGAA	5 cut(s)	63, 415, 1380, 1526, 2179
TspGWI	ACGGA	4 cut(s)	291, 353, 534, 1734
TspRI	CASTG	2 cut(s)	143, 1881
Van91I	CCANNNNNTGG	1 cut(s)	1976
Vha464I	CTTAAG	1 cut(s)	929
VpaK11BI	GGWCC	4 cut(s)	322, 1429, 1589, 1727
VspI	ATTAAT	1 cut(s)	585
XagI	CCTNNNNNAGG	2 cut(s)	1779, 1911
XapI	RAATTY	4 cut(s)	168, 440, 453, 1330
XceI	RCATGY	1 cut(s)	1988
XhoI	CTCGAG	1 cut(s)	1526
XspI	CTAG	4 cut(s)	152, 1263, 1308, 1698
ZrmI	AGTACT	1 cut(s)	2119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.