Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Reverse (-)

62351627 .. 62356096

Gene Structure 4470 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G034450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGAGGCCATCCAACCAAACCCTATCGAAACCCTAGATCACCAACCTCCCTCCGAACCCCCCGCCTCCTACAACCACCACCCTCCTTCGGAATCTCTAGTCTCCGATTACAAGGACCCGTCTCCTCCCCCATCTCAAACCCTAGCCTCCCAGGCCGCCGCCGCCGCCGCCGCTGTCGAGAACGGAAATTCCGCCGACGCCGGTAAGGCGGTTGCTCTGCTGATATCGGAAAACGGACTGACCAACACGCAGAGCGGGACGACCGACCGGGAAGTCTCCGGCGGAGAGGAGGAGACCACGAGCAGGCGGATCCGTCGCAGCCGGTGGGACCCGCAGCCTGAGTCGGAGAACCAGGGGGATGAATCCGGTAGCGGGAAGAGGAAGAGGAAGTCGCGGTGGGCCGCCGAGGAGCCCAAGCCGGTGGTTCAGCTGCCGGATTTCATGGGAGGTATAGAATTCGATCCTGAAATTCAAGCTTTGAATAGTAGGCTTCTTGAGATTAGTCGGATGCTCTCTTCGGGGTTGCCTTTGGATGACAGACCCGAAGGAGCTAGGTCTCCGTCGCCGGAGCCGGTGTATGATAACATGGGGATTAGGATTAATACTAGAGAGTTTCGAGCGCGTGAGAGGTTGAATAGAGAGAGGCAGGAGATTATTGCTCAGATTCTTAAGAGGAACCCTAACTATAAGCCTCCGGCGGATTACAGGCCGCCTAAGCTTCACAAGAAGCTTTACATTCCCATGAAGGAGTACCCTGGTTACAATTTTATTGGGCTTATTATCGGCCCAAGGGGTAATACTCAGAAGAGGATGGAGAAAGAAACTGGTGCGAAGATTGTGATTAGGGGGAAAGGGTCTGTGAAGGAGGGTAGGTTGCAACAGAAGAGGGATTTGAAGCCTGATCCGTCGGAGAATGAGGACTTGCATGTTCTGGTTGAGGCTGATACGCAGGATGCTCTTGATGCTGCAGCTGGGATGGTGGAGAAGCTCTTGCAGCCTGTGGATGAGGTGTTGAATGAGCATAAGAGGCAACAGCTTAGGGAACTTGCGGCGTTGAATGGGACTATTAGGGATGAGGAGTATTGTAGGTTATGTGGTGAGCCTGGGCATCGTCAGTATGCATGTCCTTCACGAACCTCAACCTTTAAGAGTGATGTGCTCTGTAAGATATGTGGTGATGGTGGGCATCCTACTATCGATTGTCCAATGAAGGGTACATCTGGGAAGAAAATGGATGATGAGTATCAGAATTTTTTGGCTGAGTTAGGTGGGACAGTTCCCGAGTCAGCAACTAAGCAGACTGCTACTCTGGCTCTTGGCCCAGGGACTTCAGTAAGCAATCCTCCGTGGTCTAACAGTGGTGGGAGTGCTAGCAGTGCATCACATCCAGGGTTGGGTTTTTCTGGAATTAAGCCTACTACAAAGGAACATGACGACACAAATTTGTACATTGGATACTTGCCACCTACACTTGAGGATGATGGTTTGATCGGTATGTTTTCACAGTTCGGTGACATTGTGATGGCCAAAGTTATCAAGGACCGGGTTACTGGATTGAGTAAAGGTTATGGATTTGTGAAGTACGCAGATGTTCAGATGGCTAATAATGCTATTGCAAGCATGAATGGCTATCGGCTTGAGGGGCGATCAATTGCTGTCAGAGTTGCTGGCAAGCCTCCCCAACCTGTTGTGCCTCCCGGACTACCAGCTTCAGCAATGCCGTCATACCCTGTTTCCAGTCAGCCTGTTGGTGCCTATCCCTCTCAGCAGTTTTCCCCAGGTGGTCCTCTTGGGAATGCACCACCTACTAGCTATGCGGGTACTCCGGTTCCATGGGGACCTCCCGTTCCTCCTCCTTATGCTCCTTATGTCCCTCCCCCTCCTCCTGCTTCAGCAATGTTTTATCCTCCCATGAGTCAACCTATGGCTGGTTATGGTCCACGGTACCCTCCTCCCCCTGGTGCACCACCTCAGCTTCCCTCCAGTGAAGCACAGCAGAGTTACCCTCCTCCAGGAGTTCAATCTGAAAACCCTACCCAATCTTTACCAACTAGTATGTATGGGAGCTCTTTACCGGCAATGCCACCAAATGGCCAACACACTTATCCTCCATCTTCATATGGTTACTCATCTTACTACAATGCTGTTCCACCTCCCCCTCCCTCAACTACAGACCAATCTCAGAACATTGGTAATGTGCCATGGGCCACAAGTACTCCAGCTCCCCCTCCTGCTTCTTCTGCAGAGAAAGCAACATATGGTGCAGATGCAGAGTATGAGAAGTTCATGGCAGAGACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

767

Amino Acids

82.63

Weight (kDa)

5.75

Isoelectric Point (pI)

59.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	129 - 236	5.9e-25	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	250 - 332	7.6e-24	KHDC4/BBP-like, KH-domain type I
RRM_1	PF00076	482 - 551	1.1e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	272
Acc65I	GGTACC	1 cut(s)	1944
AccB1I	GGYRCC	2 cut(s)	1751, 1944
AccB7I	CCANNNNNTGG	1 cut(s)	2090
AccBSI	CCGCTC	1 cut(s)	255
AccII	CGCG	2 cut(s)	394, 622
AclWI	GGATC	4 cut(s)	304, 317, 455, 896
AcoI	YGGCCR	2 cut(s)	1524, 2092
AcsI	RAATTY	5 cut(s)	187, 455, 468, 1249, 1441
AcuI	CTGAAG	3 cut(s)	1314, 1695, 1875
AcyI	GRCGYC	1 cut(s)	198
AfaI	GTAC	7 cut(s)	752, 1216, 1448, 1583, 1822, 1946, 2215
AfiI	CCNNNNNNNGG	9 cut(s)	88, 303, 372, 1211, 1394, 1928, 1958, 2012, 2090
AflII	CTTAAG	1 cut(s)	668
AgsI	TTSAA	7 cut(s)	473, 481, 634, 895, 1015, 1057, 2021
AhlI	ACTAGT	1 cut(s)	2051
AjnI	CCWGG	9 cut(s)	150, 351, 754, 1102, 1321, 1387, 1777, 1957, 2011
AloI	GAACNNNNNNTCC	4 cut(s)	173, 205, 1830, 1862
Alw21I	GWGCWC	3 cut(s)	1161, 1966, 2069
Alw26I	GTCTC	6 cut(s)	106, 126, 280, 287, 561, 2288
Alw44I	GTGCAC	1 cut(s)	1962
AlwI	GGATC	4 cut(s)	304, 317, 455, 896
Ama87I	CYCGRG	1 cut(s)	1280
AoxI	GGCC	9 cut(s)	6, 153, 399, 707, 784, 1318, 1524, 2092, 2205
ApaLI	GTGCAC	1 cut(s)	1962
ApeKI	GCWGC	6 cut(s)	318, 334, 430, 965, 968, 994
ApoI	RAATTY	5 cut(s)	187, 455, 468, 1249, 1441
AseI	ATTAAT	1 cut(s)	600
Asp718I	GGTACC	1 cut(s)	1944
AspLEI	GCGC	1 cut(s)	622
AsuC2I	CCSGG	3 cut(s)	269, 1544, 1698
AsuHPI	GGTGA	4 cut(s)	32, 1109, 1187, 1523
AsuNHI	GCTAGC	1 cut(s)	1370
AvaI	CYCGRG	1 cut(s)	1280
AvaII	GGWCC	6 cut(s)	115, 328, 1540, 1784, 1838, 1937
BaeGI	GKGCMC	1 cut(s)	1966
BaeI	ACNNNNGTAYC	2 cut(s)	1812, 1845
BalI	TGGCCA	2 cut(s)	1526, 2094
BamHI	GGATCC	1 cut(s)	309
BanI	GGYRCC	2 cut(s)	1751, 1944
BanII	GRGCYC	2 cut(s)	414, 2069
BauI	CACGAG	1 cut(s)	298
Bbv12I	GWGCWC	3 cut(s)	1161, 1966, 2069
BbvCI	CCTCAGC	1 cut(s)	1971
BbvI	GCAGC	6 cut(s)	330, 346, 417, 952, 980, 1006
BccI	CCATC	9 cut(s)	17, 139, 805, 970, 1172, 1475, 1516, 1591, 2119
BceAI	ACGGC	1 cut(s)	1705
BciT130I	CCWGG	9 cut(s)	152, 353, 756, 1104, 1323, 1389, 1779, 1959, 2013
BciVI	GTATCC	1 cut(s)	1448
BcnI	CCSGG	3 cut(s)	269, 1544, 1698
BcoDI	GTCTC	6 cut(s)	106, 126, 280, 287, 561, 2288
BcuI	ACTAGT	1 cut(s)	2051
BfaI	CTAG	8 cut(s)	35, 98, 143, 552, 606, 1371, 1809, 2052
BfmI	CTRYAG	3 cut(s)	966, 2169, 2241
BfrI	CTTAAG	1 cut(s)	668
BfuI	GTATCC	1 cut(s)	1448
BglI	GCCNNNNNGGC	2 cut(s)	152, 206
BmcAI	AGTACT	1 cut(s)	2215
Bme18I	GGWCC	6 cut(s)	115, 328, 1540, 1784, 1838, 1937
BmeT110I	CYCGRG	1 cut(s)	1280
BmsI	GCATC	7 cut(s)	498, 943, 952, 1117, 1195, 1388, 2257
BmtI	GCTAGC	1 cut(s)	1374
BplI	GAGNNNNNCTC	2 cut(s)	1990, 2022
BpmI	CTGGAG	3 cut(s)	1966, 1995, 2202
Bpu10I	CCTNAGC	3 cut(s)	714, 1037, 1971
BpuEI	CTTGAG	3 cut(s)	515, 1493, 1658
BpuMI	CCSGG	3 cut(s)	269, 1544, 1698
Bsa29I	ATCGAT	1 cut(s)	1197
BsaBI	GATNNNNATC	1 cut(s)	1242
BsaHI	GRCGYC	1 cut(s)	198
BsaI	GGTCTC	2 cut(s)	287, 561
BsaWI	WCCGGW	2 cut(s)	365, 1825
Bsc4I	CCNNNNNNNGG	9 cut(s)	88, 303, 372, 1211, 1394, 1928, 1958, 2012, 2090
Bse118I	RCCGGY	5 cut(s)	200, 321, 418, 571, 2074
Bse1I	ACTGG	4 cut(s)	829, 1555, 1737, 1983
Bse3DI	GCAATG	3 cut(s)	1722, 1902, 2085
Bse8I	GATNNNNATC	1 cut(s)	1242
BseBI	CCWGG	9 cut(s)	152, 353, 756, 1104, 1323, 1389, 1779, 1959, 2013
BseCI	ATCGAT	1 cut(s)	1197
BseJI	GATNNNNATC	1 cut(s)	1242
BseLI	CCNNNNNNNGG	9 cut(s)	88, 303, 372, 1211, 1394, 1928, 1958, 2012, 2090
BseMI	GCAATG	3 cut(s)	1722, 1902, 2085
BseMII	CTCAG	7 cut(s)	330, 674, 815, 1251, 1778, 1985, 2195
BseNI	ACTGG	4 cut(s)	829, 1555, 1737, 1983
BseRI	GAGGAG	9 cut(s)	114, 302, 305, 422, 1091, 1842, 1872, 1941, 1998
BseSI	GKGCMC	1 cut(s)	1966
BseXI	GCAGC	6 cut(s)	330, 346, 417, 952, 980, 1006
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	1 cut(s)	2283
Bsh1236I	CGCG	2 cut(s)	394, 622
Bsh1285I	CGRYCG	2 cut(s)	264, 268
BshFI	GGCC	9 cut(s)	8, 155, 401, 709, 786, 1320, 1526, 2094, 2207
BshNI	GGYRCC	2 cut(s)	1751, 1944
BshVI	ATCGAT	1 cut(s)	1197
BsiEI	CGRYCG	2 cut(s)	264, 268
BsiHKAI	GWGCWC	3 cut(s)	1161, 1966, 2069
BsiHKCI	CYCGRG	1 cut(s)	1280
BslFI	GGGAC	7 cut(s)	271, 341, 1075, 1285, 1339, 1851, 1856
BslI	CCNNNNNNNGG	9 cut(s)	88, 303, 372, 1211, 1394, 1928, 1958, 2012, 2090
BsmAI	GTCTC	6 cut(s)	106, 126, 280, 287, 561, 2288
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	7 cut(s)	271, 341, 1075, 1285, 1339, 1851, 1856
BsmI	GAATGC	1 cut(s)	1801
BsnI	GGCC	9 cut(s)	8, 155, 401, 709, 786, 1320, 1526, 2094, 2207
Bso31I	GGTCTC	2 cut(s)	287, 561
BsoBI	CYCGRG	1 cut(s)	1280
Bsp1286I	GDGCHC	4 cut(s)	414, 1161, 1966, 2069
Bsp1407I	TGTACA	1 cut(s)	1446
Bsp143I	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
Bsp19I	CCATGG	2 cut(s)	1832, 2201
BspANI	GGCC	9 cut(s)	8, 155, 401, 709, 786, 1320, 1526, 2094, 2207
BspCNI	CTCAG	7 cut(s)	331, 673, 814, 1252, 1777, 1984, 2194
BspDI	ATCGAT	1 cut(s)	1197
BspFNI	CGCG	2 cut(s)	394, 622
BspMAI	CTGCAG	2 cut(s)	970, 2245
BspOI	GCTAGC	1 cut(s)	1374
BspPI	GGATC	4 cut(s)	304, 317, 455, 896
BspT107I	GGYRCC	2 cut(s)	1751, 1944
BspTI	CTTAAG	1 cut(s)	668
BspTNI	GGTCTC	2 cut(s)	287, 561
BsrBI	CCGCTC	1 cut(s)	255
BsrDI	GCAATG	3 cut(s)	1722, 1902, 2085
BsrFI	RCCGGY	5 cut(s)	200, 321, 418, 571, 2074
BsrGI	TGTACA	1 cut(s)	1446
BsrI	ACTGG	4 cut(s)	829, 1555, 1737, 1983
BssAI	RCCGGY	5 cut(s)	200, 321, 418, 571, 2074
BssMI	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
BssNI	GRCGYC	1 cut(s)	198
BssSI	CACGAG	1 cut(s)	298
BssT1I	CCWWGG	3 cut(s)	788, 1832, 2201
Bst2BI	CACGAG	1 cut(s)	298
Bst2UI	CCWGG	9 cut(s)	152, 353, 756, 1104, 1323, 1389, 1779, 1959, 2013
Bst4CI	ACNGT	4 cut(s)	1276, 1358, 1506, 1944
Bst6I	CTCTTC	5 cut(s)	371, 377, 520, 800, 878
BstACI	GRCGYC	1 cut(s)	198
BstAFI	CTTAAG	1 cut(s)	668
BstAUI	TGTACA	1 cut(s)	1446
BstC8I	GCNNGC	5 cut(s)	305, 1372, 1618, 1669, 1673
BstDSI	CCRYGG	4 cut(s)	1346, 1832, 1940, 2201
BstENI	CCTNNNNNAGG	1 cut(s)	2010
BstFNI	CGCG	2 cut(s)	394, 622
BstHHI	GCGC	1 cut(s)	622
BstKTI	GATC	6 cut(s)	40, 312, 463, 904, 1491, 1649
BstMAI	GTCTC	6 cut(s)	106, 126, 280, 287, 561, 2288
BstMBI	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
BstMCI	CGRYCG	2 cut(s)	264, 268
BstNI	CCWGG	9 cut(s)	152, 353, 756, 1104, 1323, 1389, 1779, 1959, 2013
BstNSI	RCATGY	2 cut(s)	929, 1125
BstSFI	CTRYAG	3 cut(s)	966, 2169, 2241
BstSLI	GKGCMC	1 cut(s)	1966
BstUI	CGCG	2 cut(s)	394, 622
BstV1I	GCAGC	6 cut(s)	330, 346, 417, 952, 980, 1006
BstX2I	RGATCY	1 cut(s)	309
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	1 cut(s)	309
Bsu15I	ATCGAT	1 cut(s)	1197
BsuI	GTATCC	1 cut(s)	1448
BsuRI	GGCC	9 cut(s)	8, 155, 401, 709, 786, 1320, 1526, 2094, 2207
BsuTUI	ATCGAT	1 cut(s)	1197
BtgI	CCRYGG	4 cut(s)	1346, 1832, 1940, 2201
BtsI	GCAGTG	1 cut(s)	1381
BtsIMutI	CAGTG	3 cut(s)	1363, 1381, 1990
Cac8I	GCNNGC	5 cut(s)	305, 1372, 1618, 1669, 1673
CfoI	GCGC	1 cut(s)	622
Cfr10I	RCCGGY	5 cut(s)	200, 321, 418, 571, 2074
ClaI	ATCGAT	1 cut(s)	1197
CseI	GACGC	1 cut(s)	206
Csp6I	GTAC	7 cut(s)	751, 1215, 1447, 1582, 1821, 1945, 2214
CviQI	GTAC	7 cut(s)	751, 1215, 1447, 1582, 1821, 1945, 2214
DpnI	GATC	6 cut(s)	39, 311, 462, 903, 1490, 1648
DpnII	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
DrdI	GACNNNNNNGTC	1 cut(s)	272
DseDI	GACNNNNNNGTC	1 cut(s)	272
EaeI	YGGCCR	2 cut(s)	1524, 2092
Eam1104I	CTCTTC	5 cut(s)	371, 377, 520, 800, 878
EarI	CTCTTC	5 cut(s)	371, 377, 520, 800, 878
EciI	GGCGGA	4 cut(s)	181, 297, 322, 713
Ecl136II	GAGCTC	1 cut(s)	2067
Eco130I	CCWWGG	3 cut(s)	788, 1832, 2201
Eco24I	GRGCYC	2 cut(s)	414, 2069
Eco31I	GGTCTC	2 cut(s)	287, 561
Eco32I	GATATC	1 cut(s)	225
Eco47I	GGWCC	6 cut(s)	115, 328, 1540, 1784, 1838, 1937
Eco53kI	GAGCTC	1 cut(s)	2067
Eco57I	CTGAAG	3 cut(s)	1314, 1695, 1875
Eco88I	CYCGRG	1 cut(s)	1280
EcoICRI	GAGCTC	1 cut(s)	2067
EcoNI	CCTNNNNNAGG	1 cut(s)	2010
EcoO109I	RGGNCCY	3 cut(s)	115, 328, 1838
EcoRI	GAATTC	1 cut(s)	455
EcoRII	CCWGG	9 cut(s)	150, 351, 754, 1102, 1321, 1387, 1777, 1957, 2011
EcoRV	GATATC	1 cut(s)	225
EcoT14I	CCWWGG	3 cut(s)	788, 1832, 2201
EcoT22I	ATGCAT	1 cut(s)	1123
EcoT38I	GRGCYC	2 cut(s)	414, 2069
ErhI	CCWWGG	3 cut(s)	788, 1832, 2201
Esp3I	CGTCTC	1 cut(s)	126
FaqI	GGGAC	7 cut(s)	271, 341, 1075, 1285, 1339, 1851, 1856
FauI	CCCGC	5 cut(s)	70, 248, 339, 365, 1810
FauNDI	CATATG	2 cut(s)	2119, 2257
FriOI	GRGCYC	2 cut(s)	414, 2069
FspBI	CTAG	8 cut(s)	35, 98, 143, 552, 606, 1371, 1809, 2052
GlaI	GCGC	1 cut(s)	621
GsaI	CCCAGC	1 cut(s)	975
GsuI	CTGGAG	3 cut(s)	1966, 1995, 2202
HaeIII	GGCC	9 cut(s)	8, 155, 401, 709, 786, 1320, 1526, 2094, 2207
HgaI	GACGC	1 cut(s)	206
HhaI	GCGC	1 cut(s)	622
Hin1I	GRCGYC	1 cut(s)	198
Hin6I	GCGC	1 cut(s)	620
HinP1I	GCGC	1 cut(s)	620
HincII	GTYRAC	1 cut(s)	1919
HindII	GTYRAC	1 cut(s)	1919
HindIII	AAGCTT	3 cut(s)	474, 716, 728
HinfI	GANTC	6 cut(s)	92, 341, 362, 664, 1283, 1915
HphI	GGTGA	4 cut(s)	32, 1109, 1187, 1523
Hpy166II	GTNNAC	3 cut(s)	1919, 1940, 1964
Hpy188III	TCNNGA	7 cut(s)	178, 464, 494, 959, 1131, 1280, 1404
Hpy8I	GTNNAC	3 cut(s)	1919, 1940, 1964
Hpy99I	CGWCG	4 cut(s)	200, 318, 565, 910
HpyAV	CCTTC	6 cut(s)	96, 539, 739, 856, 1137, 1204
HpyCH4III	ACNGT	4 cut(s)	1276, 1358, 1506, 1944
Hsp92I	GRCGYC	1 cut(s)	198
HspAI	GCGC	1 cut(s)	620
KflI	GGGWCCC	1 cut(s)	328
KpnI	GGTACC	1 cut(s)	1948
Kzo9I	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
LmnI	GCTCC	6 cut(s)	409, 548, 568, 1867, 2064, 2227
Lsp1109I	GCAGC	6 cut(s)	330, 346, 417, 952, 980, 1006
LweI	GCATC	7 cut(s)	498, 943, 952, 1117, 1195, 1388, 2257
MaeI	CTAG	8 cut(s)	35, 98, 143, 552, 606, 1371, 1809, 2052
MaeIII	GTNAC	5 cut(s)	758, 1511, 1546, 2000, 2123
MalI	GATC	6 cut(s)	39, 311, 462, 903, 1490, 1648
MbiI	CCGCTC	1 cut(s)	255
MboI	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
MboII	GAAGA	9 cut(s)	388, 394, 507, 817, 844, 895, 1237, 2106, 2229
MfeI	CAATTG	1 cut(s)	1650
MflI	RGATCY	1 cut(s)	309
MhlI	GDGCHC	4 cut(s)	414, 1161, 1966, 2069
MlsI	TGGCCA	2 cut(s)	1526, 2094
MluCI	AATT	8 cut(s)	187, 455, 468, 763, 1249, 1407, 1441, 1650
MluNI	TGGCCA	2 cut(s)	1526, 2094
MlyI	GAGTC	3 cut(s)	350, 1292, 1924
MmeI	TCCRAC	4 cut(s)	37, 324, 485, 888
Mox20I	TGGCCA	2 cut(s)	1526, 2094
Mph1103I	ATGCAT	1 cut(s)	1123
MscI	TGGCCA	2 cut(s)	1526, 2094
MseI	TTAA	4 cut(s)	600, 669, 1146, 1410
MslI	CAYNNNNRTG	2 cut(s)	740, 1520
Msp20I	TGGCCA	2 cut(s)	1526, 2094
MspA1I	CMGCKG	3 cut(s)	173, 430, 971
MspCI	CTTAAG	1 cut(s)	668
MunI	CAATTG	1 cut(s)	1650
Mva1269I	GAATGC	1 cut(s)	1801
MvaI	CCWGG	9 cut(s)	152, 353, 756, 1104, 1323, 1389, 1779, 1959, 2013
MvnI	CGCG	2 cut(s)	394, 622
NciI	CCSGG	3 cut(s)	269, 1544, 1698
NcoI	CCATGG	2 cut(s)	1832, 2201
NdeI	CATATG	2 cut(s)	2119, 2257
NdeII	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
NheI	GCTAGC	1 cut(s)	1370
NmeAIII	GCCGAG	1 cut(s)	430
NmuCI	GTSAC	1 cut(s)	1511
NsiI	ATGCAT	1 cut(s)	1123
NspI	RCATGY	2 cut(s)	929, 1125
PasI	CCCWGGG	1 cut(s)	1322
PctI	GAATGC	1 cut(s)	1801
PfeI	GAWTC	3 cut(s)	92, 362, 664
PflMI	CCANNNNNTGG	1 cut(s)	2090
PfoI	TCCNGGA	2 cut(s)	1696, 2011
PleI	GAGTC	3 cut(s)	349, 1291, 1923
PpsI	GAGTC	3 cut(s)	349, 1291, 1923
PpuMI	RGGWCCY	3 cut(s)	115, 328, 1838
PshBI	ATTAAT	1 cut(s)	600
Psp124BI	GAGCTC	1 cut(s)	2069
Psp5II	RGGWCCY	3 cut(s)	115, 328, 1838
Psp6I	CCWGG	9 cut(s)	150, 351, 754, 1102, 1321, 1387, 1777, 1957, 2011
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	9 cut(s)	150, 351, 754, 1102, 1321, 1387, 1777, 1957, 2011
PspPPI	RGGWCCY	3 cut(s)	115, 328, 1838
PsrI	GAACNNNNNNTAC	2 cut(s)	2267, 2299
PstI	CTGCAG	2 cut(s)	970, 2245
PsuI	RGATCY	1 cut(s)	309
PvuII	CAGCTG	2 cut(s)	430, 971
RsaI	GTAC	7 cut(s)	752, 1216, 1448, 1583, 1822, 1946, 2215
RsaNI	GTAC	7 cut(s)	751, 1215, 1447, 1582, 1821, 1945, 2214
RseI	CAYNNNNRTG	2 cut(s)	740, 1520
SacI	GAGCTC	1 cut(s)	2069
SaqAI	TTAA	4 cut(s)	600, 669, 1146, 1410
Sau3AI	GATC	6 cut(s)	37, 309, 460, 901, 1488, 1646
ScaI	AGTACT	1 cut(s)	2215
SchI	GAGTC	3 cut(s)	350, 1292, 1924
SduI	GDGCHC	4 cut(s)	414, 1161, 1966, 2069
SfaNI	GCATC	7 cut(s)	498, 943, 952, 1117, 1195, 1388, 2257
SfcI	CTRYAG	3 cut(s)	966, 2169, 2241
SinI	GGWCC	6 cut(s)	115, 328, 1540, 1784, 1838, 1937
SmiMI	CAYNNNNRTG	2 cut(s)	740, 1520
SmlI	CTYRAG	4 cut(s)	494, 668, 1472, 1637
SmoI	CTYRAG	4 cut(s)	494, 668, 1472, 1637
SpeI	ACTAGT	1 cut(s)	2051
Sse9I	AATT	8 cut(s)	187, 455, 468, 763, 1249, 1407, 1441, 1650
SspMI	CTAG	8 cut(s)	35, 98, 143, 552, 606, 1371, 1809, 2052
SstI	GAGCTC	1 cut(s)	2069
StyI	CCWWGG	3 cut(s)	788, 1832, 2201
TaaI	ACNGT	4 cut(s)	1276, 1358, 1506, 1944
TaqI	TCGA	5 cut(s)	27, 177, 459, 616, 1197
TaqII	GACCGA	1 cut(s)	278
TasI	AATT	8 cut(s)	187, 455, 468, 763, 1249, 1407, 1441, 1650
TatI	WGTACW	2 cut(s)	1446, 2213
TauI	GCSGC	9 cut(s)	158, 161, 164, 167, 170, 173, 404, 712, 1052
TfiI	GAWTC	3 cut(s)	92, 362, 664
Tru1I	TTAA	4 cut(s)	600, 669, 1146, 1410
Tru9I	TTAA	4 cut(s)	600, 669, 1146, 1410
TscAI	CASTG	3 cut(s)	1363, 1381, 1990
TseFI	GTSAC	1 cut(s)	1511
TseI	GCWGC	6 cut(s)	318, 334, 430, 965, 968, 994
Tsp45I	GTSAC	1 cut(s)	1511
TspDTI	ATGAA	7 cut(s)	375, 430, 758, 1223, 1637, 2106, 2275
TspGWI	ACGGA	6 cut(s)	198, 249, 302, 549, 894, 1335
TspRI	CASTG	3 cut(s)	1363, 1381, 1990
Van91I	CCANNNNNTGG	1 cut(s)	2090
Vha464I	CTTAAG	1 cut(s)	668
VneI	GTGCAC	1 cut(s)	1962
VpaK11BI	GGWCC	6 cut(s)	115, 328, 1540, 1784, 1838, 1937
VspI	ATTAAT	1 cut(s)	600
XagI	CCTNNNNNAGG	1 cut(s)	2010
XapI	RAATTY	5 cut(s)	187, 455, 468, 1249, 1441
XceI	RCATGY	2 cut(s)	929, 1125
XspI	CTAG	8 cut(s)	35, 98, 143, 552, 606, 1371, 1809, 2052
ZrmI	AGTACT	1 cut(s)	2215
Zsp2I	ATGCAT	1 cut(s)	1123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.