No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 332 |
| AccB1I | GGYRCC | 2 cut(s) | 188, 992 |
| AccBSI | CCGCTC | 2 cut(s) | 1184, 2761 |
| AccIII | TCCGGA | 1 cut(s) | 2848 |
| AciI | CCGC | 8 cut(s) | 1041, 1136, 1182, 1421, 1544, 2117, 2651, 2761 |
| AclI | AACGTT | 1 cut(s) | 912 |
| AclWI | GGATC | 6 cut(s) | 18, 742, 1192, 2780, 3149, 3344 |
| AcsI | RAATTY | 9 cut(s) | 715, 864, 1266, 1456, 1520, 2039, 3013, 3053, 3429 |
| AcuI | CTGAAG | 8 cut(s) | 77, 204, 843, 1893, 1998, 2088, 2298, 3009 |
| AcyI | GRCGYC | 1 cut(s) | 2829 |
| AfaI | GTAC | 7 cut(s) | 461, 1569, 1765, 1806, 2052, 3258, 3547 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1094, 1550, 3119, 3491 |
| AflII | CTTAAG | 2 cut(s) | 824, 1072 |
| AflIII | ACRYGT | 1 cut(s) | 3451 |
| AjiI | CACGTC | 1 cut(s) | 3452 |
| AjnI | CCWGG | 6 cut(s) | 499, 1524, 1807, 1837, 3057, 3490 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1422, 1454, 1645, 1677 |
| AleI | CACNNNNGTG | 1 cut(s) | 1431 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1446, 1478 |
| Alw21I | GWGCWC | 2 cut(s) | 2796, 3088 |
| Alw26I | GTCTC | 5 cut(s) | 1134, 1322, 2219, 3206, 3507 |
| Alw44I | GTGCAC | 1 cut(s) | 3084 |
| AlwI | GGATC | 6 cut(s) | 18, 742, 1192, 2780, 3149, 3344 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1262 |
| Aor13HI | TCCGGA | 1 cut(s) | 2848 |
| AoxI | GGCC | 5 cut(s) | 155, 916, 2369, 2441, 2803 |
| ApaLI | GTGCAC | 1 cut(s) | 3084 |
| ApoI | RAATTY | 9 cut(s) | 715, 864, 1266, 1456, 1520, 2039, 3013, 3053, 3429 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1233 |
| AspLEI | GCGC | 5 cut(s) | 218, 333, 1081, 1540, 3172 |
| AspS9I | GGNCC | 6 cut(s) | 917, 1685, 2240, 2369, 3494, 3533 |
| AsuC2I | CCSGG | 2 cut(s) | 1239, 1746 |
| AsuHPI | GGTGA | 6 cut(s) | 105, 489, 1457, 2003, 2326, 3456 |
| AvaII | GGWCC | 4 cut(s) | 1685, 2240, 3494, 3533 |
| AxyI | CCTNAGG | 3 cut(s) | 1549, 1929, 2745 |
| BaeGI | GKGCMC | 3 cut(s) | 995, 2969, 3088 |
| BanI | GGYRCC | 2 cut(s) | 188, 992 |
| BanII | GRGCYC | 1 cut(s) | 2796 |
| BbsI | GAAGAC | 4 cut(s) | 39, 1854, 2706, 3560 |
| Bbv12I | GWGCWC | 2 cut(s) | 2796, 3088 |
| BccI | CCATC | 8 cut(s) | 429, 1072, 1568, 2014, 2153, 2360, 2458, 2570 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3461, 3495 |
| BciT130I | CCWGG | 6 cut(s) | 501, 1526, 1809, 1839, 3059, 3492 |
| BclI | TGATCA | 4 cut(s) | 846, 2140, 2346, 2599 |
| BcnI | CCSGG | 2 cut(s) | 1239, 1746 |
| BcoDI | GTCTC | 5 cut(s) | 1134, 1322, 2219, 3206, 3507 |
| BfaI | CTAG | 5 cut(s) | 129, 135, 834, 2075, 3188 |
| BfoI | RGCGCY | 1 cut(s) | 1082 |
| BfrI | CTTAAG | 2 cut(s) | 824, 1072 |
| BglII | AGATCT | 3 cut(s) | 131, 1163, 3144 |
| BlpI | GCTNAGC | 1 cut(s) | 599 |
| Bme1390I | CCNGG | 8 cut(s) | 501, 1239, 1526, 1746, 1809, 1839, 3059, 3492 |
| Bme18I | GGWCC | 4 cut(s) | 1685, 2240, 3494, 3533 |
| BmgBI | CACGTC | 1 cut(s) | 3452 |
| BmgT120I | GGNCC | 6 cut(s) | 917, 1685, 2240, 2369, 3494, 3533 |
| BmiI | GGNNCC | 5 cut(s) | 190, 994, 1686, 2061, 2742 |
| BmrFI | CCNGG | 8 cut(s) | 501, 1239, 1526, 1746, 1809, 1839, 3059, 3492 |
| BmrI | ACTGGG | 2 cut(s) | 629, 1064 |
| BmuI | ACTGGG | 2 cut(s) | 629, 1064 |
| BpiI | GAAGAC | 4 cut(s) | 39, 1854, 2706, 3560 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3203, 3235 |
| BpmI | CTGGAG | 2 cut(s) | 48, 2613 |
| Bpu10I | CCTNAGC | 2 cut(s) | 730, 813 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 599 |
| BpuEI | CTTGAG | 3 cut(s) | 2126, 2330, 3356 |
| BpuMI | CCSGG | 2 cut(s) | 1239, 1746 |
| BsaBI | GATNNNNATC | 1 cut(s) | 9 |
| BsaHI | GRCGYC | 1 cut(s) | 2829 |
| BsaI | GGTCTC | 1 cut(s) | 3507 |
| BsaJI | CCNNGG | 7 cut(s) | 88, 591, 1525, 1745, 1837, 2925, 3497 |
| BsaWI | WCCGGW | 2 cut(s) | 2848, 3505 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 142, 172, 3114, 3144 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1094, 1550, 3119, 3491 |
| Bse21I | CCTNAGG | 3 cut(s) | 1549, 1929, 2745 |
| Bse3DI | GCAATG | 2 cut(s) | 3295, 3310 |
| Bse8I | GATNNNNATC | 1 cut(s) | 9 |
| BseAI | TCCGGA | 1 cut(s) | 2848 |
| BseBI | CCWGG | 6 cut(s) | 501, 1526, 1809, 1839, 3059, 3492 |
| BseDI | CCNNGG | 7 cut(s) | 88, 591, 1525, 1745, 1837, 2925, 3497 |
| BseGI | GGATG | 4 cut(s) | 1474, 1807, 2779, 3331 |
| BseJI | GATNNNNATC | 1 cut(s) | 9 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1094, 1550, 3119, 3491 |
| BseMI | GCAATG | 2 cut(s) | 3295, 3310 |
| BseRI | GAGGAG | 3 cut(s) | 739, 2687, 2753 |
| BseSI | GKGCMC | 3 cut(s) | 995, 2969, 3088 |
| BseYI | CCCAGC | 1 cut(s) | 3419 |
| BsgI | GTGCAG | 1 cut(s) | 1817 |
| BshFI | GGCC | 5 cut(s) | 157, 918, 2371, 2443, 2805 |
| BshNI | GGYRCC | 2 cut(s) | 188, 992 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2796, 3088 |
| BsiSI | CCGG | 4 cut(s) | 1239, 1745, 2849, 3506 |
| BslFI | GGGAC | 1 cut(s) | 3095 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1094, 1550, 3119, 3491 |
| BsmAI | GTCTC | 5 cut(s) | 1134, 1322, 2219, 3206, 3507 |
| BsmFI | GGGAC | 1 cut(s) | 3095 |
| BsmI | GAATGC | 6 cut(s) | 256, 319, 889, 1832, 2258, 2393 |
| BsnI | GGCC | 5 cut(s) | 157, 918, 2371, 2443, 2805 |
| Bso31I | GGTCTC | 1 cut(s) | 3507 |
| Bsp1286I | GDGCHC | 4 cut(s) | 995, 2796, 2969, 3088 |
| Bsp13I | TCCGGA | 1 cut(s) | 2848 |
| Bsp1407I | TGTACA | 2 cut(s) | 1567, 3545 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 599 |
| Bsp19I | CCATGG | 1 cut(s) | 3497 |
| BspACI | CCGC | 8 cut(s) | 1041, 1136, 1182, 1421, 1544, 2117, 2651, 2761 |
| BspANI | GGCC | 5 cut(s) | 157, 918, 2371, 2443, 2805 |
| BspEI | TCCGGA | 1 cut(s) | 2848 |
| BspHI | TCATGA | 2 cut(s) | 2329, 2491 |
| BspLI | GGNNCC | 5 cut(s) | 190, 994, 1686, 2061, 2742 |
| BspPI | GGATC | 6 cut(s) | 18, 742, 1192, 2780, 3149, 3344 |
| BspQI | GCTCTTC | 2 cut(s) | 2274, 3509 |
| BspT107I | GGYRCC | 2 cut(s) | 188, 992 |
| BspTI | CTTAAG | 2 cut(s) | 824, 1072 |
| BspTNI | GGTCTC | 1 cut(s) | 3507 |
| BsrBI | CCGCTC | 2 cut(s) | 1184, 2761 |
| BsrDI | GCAATG | 2 cut(s) | 3295, 3310 |
| BsrGI | TGTACA | 2 cut(s) | 1567, 3545 |
| BssECI | CCNNGG | 7 cut(s) | 88, 591, 1525, 1745, 1837, 2925, 3497 |
| BssNI | GRCGYC | 1 cut(s) | 2829 |
| BssT1I | CCWWGG | 2 cut(s) | 591, 3497 |
| Bst2UI | CCWGG | 6 cut(s) | 501, 1526, 1809, 1839, 3059, 3492 |
| Bst6I | CTCTTC | 5 cut(s) | 172, 450, 2180, 2274, 3509 |
| BstACI | GRCGYC | 1 cut(s) | 2829 |
| BstAFI | CTTAAG | 2 cut(s) | 824, 1072 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2648 |
| BstAUI | TGTACA | 2 cut(s) | 1567, 3545 |
| BstC8I | GCNNGC | 4 cut(s) | 418, 831, 1034, 1832 |
| BstDSI | CCRYGG | 1 cut(s) | 3497 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3489 |
| BstF5I | GGATG | 4 cut(s) | 1474, 1807, 2779, 3331 |
| BstH2I | RGCGCY | 1 cut(s) | 1082 |
| BstHHI | GCGC | 5 cut(s) | 218, 333, 1081, 1540, 3172 |
| BstMAI | GTCTC | 5 cut(s) | 1134, 1322, 2219, 3206, 3507 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 595, 2377, 2648, 3413 |
| BstNI | CCWGG | 6 cut(s) | 501, 1526, 1809, 1839, 3059, 3492 |
| BstNSI | RCATGY | 1 cut(s) | 2998 |
| BstSCI | CCNGG | 8 cut(s) | 499, 1237, 1524, 1744, 1807, 1837, 3057, 3490 |
| BstSLI | GKGCMC | 3 cut(s) | 995, 2969, 3088 |
| BstV2I | GAAGAC | 4 cut(s) | 39, 1854, 2706, 3560 |
| BstX2I | RGATCY | 5 cut(s) | 10, 131, 734, 1163, 3144 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 428, 3498 |
| BstYI | RGATCY | 5 cut(s) | 10, 131, 734, 1163, 3144 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1549, 1929, 2745 |
| BsuRI | GGCC | 5 cut(s) | 157, 918, 2371, 2443, 2805 |
| BtgI | CCRYGG | 1 cut(s) | 3497 |
| BtgZI | GCGATG | 2 cut(s) | 1710, 3279 |
| BtrI | CACGTC | 1 cut(s) | 3452 |
| BtsCI | GGATG | 4 cut(s) | 1474, 1807, 2779, 3331 |
| BtsI | GCAGTG | 2 cut(s) | 1947, 2557 |
| BtsIMutI | CAGTG | 7 cut(s) | 583, 1540, 1706, 1947, 2557, 3088, 3437 |
| Cac8I | GCNNGC | 4 cut(s) | 418, 831, 1034, 1832 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1262 |
| CciI | TCATGA | 2 cut(s) | 2329, 2491 |
| CfoI | GCGC | 5 cut(s) | 218, 333, 1081, 1540, 3172 |
| Cfr13I | GGNCC | 6 cut(s) | 917, 1685, 2240, 2369, 3494, 3533 |
| CseI | GACGC | 1 cut(s) | 2818 |
| CsiI | ACCWGGT | 1 cut(s) | 3490 |
| Csp6I | GTAC | 7 cut(s) | 460, 1568, 1764, 1805, 2051, 3257, 3546 |
| CviQI | GTAC | 7 cut(s) | 460, 1568, 1764, 1805, 2051, 3257, 3546 |
| Eam1104I | CTCTTC | 5 cut(s) | 172, 450, 2180, 2274, 3509 |
| EarI | CTCTTC | 5 cut(s) | 172, 450, 2180, 2274, 3509 |
| Ecl136II | GAGCTC | 1 cut(s) | 2794 |
| Eco130I | CCWWGG | 2 cut(s) | 591, 3497 |
| Eco147I | AGGCCT | 1 cut(s) | 2443 |
| Eco24I | GRGCYC | 1 cut(s) | 2796 |
| Eco31I | GGTCTC | 1 cut(s) | 3507 |
| Eco32I | GATATC | 2 cut(s) | 22, 2863 |
| Eco47I | GGWCC | 4 cut(s) | 1685, 2240, 3494, 3533 |
| Eco53kI | GAGCTC | 1 cut(s) | 2794 |
| Eco57I | CTGAAG | 8 cut(s) | 77, 204, 843, 1893, 1998, 2088, 2298, 3009 |
| Eco81I | CCTNAGG | 3 cut(s) | 1549, 1929, 2745 |
| EcoICRI | GAGCTC | 1 cut(s) | 2794 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3489 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1685 |
| EcoRI | GAATTC | 3 cut(s) | 715, 1520, 3053 |
| EcoRII | CCWGG | 6 cut(s) | 499, 1524, 1807, 1837, 3057, 3490 |
| EcoRV | GATATC | 2 cut(s) | 22, 2863 |
| EcoT14I | CCWWGG | 2 cut(s) | 591, 3497 |
| EcoT22I | ATGCAT | 3 cut(s) | 958, 2644, 3295 |
| EcoT38I | GRGCYC | 1 cut(s) | 2796 |
| ErhI | CCWWGG | 2 cut(s) | 591, 3497 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 31, 1603, 1635 |
| FaqI | GGGAC | 1 cut(s) | 3095 |
| FauI | CCCGC | 1 cut(s) | 1129 |
| FbaI | TGATCA | 4 cut(s) | 846, 2140, 2346, 2599 |
| FokI | GGATG | 4 cut(s) | 1481, 1814, 2786, 3338 |
| FriOI | GRGCYC | 1 cut(s) | 2796 |
| FspBI | CTAG | 5 cut(s) | 129, 135, 834, 2075, 3188 |
| FspI | TGCGCA | 1 cut(s) | 332 |
| GlaI | GCGC | 5 cut(s) | 217, 332, 1080, 1539, 3171 |
| GsaI | CCCAGC | 1 cut(s) | 3423 |
| GsuI | CTGGAG | 2 cut(s) | 48, 2613 |
| HaeII | RGCGCY | 1 cut(s) | 1082 |
| HaeIII | GGCC | 5 cut(s) | 157, 918, 2371, 2443, 2805 |
| HapII | CCGG | 4 cut(s) | 1239, 1745, 2849, 3506 |
| HgaI | GACGC | 1 cut(s) | 2818 |
| HhaI | GCGC | 5 cut(s) | 218, 333, 1081, 1540, 3172 |
| Hin1I | GRCGYC | 1 cut(s) | 2829 |
| Hin6I | GCGC | 5 cut(s) | 216, 331, 1079, 1538, 3170 |
| HinP1I | GCGC | 5 cut(s) | 216, 331, 1079, 1538, 3170 |
| HincII | GTYRAC | 3 cut(s) | 698, 1246, 1704 |
| HindII | GTYRAC | 3 cut(s) | 698, 1246, 1704 |
| HindIII | AAGCTT | 2 cut(s) | 569, 742 |
| HpaII | CCGG | 4 cut(s) | 1239, 1745, 2849, 3506 |
| HphI | GGTGA | 6 cut(s) | 105, 489, 1457, 2003, 2326, 3456 |
| Hpy166II | GTNNAC | 7 cut(s) | 698, 1246, 1348, 1704, 1764, 3086, 3449 |
| Hpy8I | GTNNAC | 7 cut(s) | 698, 1246, 1348, 1704, 1764, 3086, 3449 |
| Hpy99I | CGWCG | 2 cut(s) | 41, 1129 |
| HpyCH4IV | ACGT | 3 cut(s) | 912, 3022, 3451 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 595, 2377, 2648, 3413 |
| HpySE526I | ACGT | 3 cut(s) | 912, 3022, 3451 |
| Hsp92I | GRCGYC | 1 cut(s) | 2829 |
| HspAI | GCGC | 5 cut(s) | 216, 331, 1079, 1538, 3170 |
| Kpn2I | TCCGGA | 1 cut(s) | 2848 |
| Ksp22I | TGATCA | 4 cut(s) | 846, 2140, 2346, 2599 |
| LguI | GCTCTTC | 2 cut(s) | 2274, 3509 |
| LmnI | GCTCC | 9 cut(s) | 205, 283, 595, 726, 2059, 2674, 2740, 2758, 3487 |
| MabI | ACCWGGT | 1 cut(s) | 3490 |
| MaeI | CTAG | 5 cut(s) | 129, 135, 834, 2075, 3188 |
| MaeII | ACGT | 3 cut(s) | 912, 3022, 3451 |
| MaeIII | GTNAC | 8 cut(s) | 181, 637, 1474, 1529, 2458, 2713, 2779, 3091 |
| MbiI | CCGCTC | 2 cut(s) | 1184, 2761 |
| MfeI | CAATTG | 4 cut(s) | 171, 1092, 2539, 3408 |
| MflI | RGATCY | 5 cut(s) | 10, 131, 734, 1163, 3144 |
| MhlI | GDGCHC | 4 cut(s) | 995, 2796, 2969, 3088 |
| MlyI | GAGTC | 4 cut(s) | 476, 965, 1109, 2714 |
| MmeI | TCCRAC | 3 cut(s) | 625, 893, 933 |
| Mph1103I | ATGCAT | 3 cut(s) | 958, 2644, 3295 |
| MroI | TCCGGA | 1 cut(s) | 2848 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1233 |
| MseI | TTAA | 9 cut(s) | 324, 531, 710, 825, 1073, 2472, 3132, 3243, 3434 |
| MslI | CAYNNNNRTG | 3 cut(s) | 426, 1431, 3036 |
| MspA1I | CMGCKG | 1 cut(s) | 1289 |
| MspCI | CTTAAG | 2 cut(s) | 824, 1072 |
| MspI | CCGG | 4 cut(s) | 1239, 1745, 2849, 3506 |
| MspR9I | CCNGG | 8 cut(s) | 501, 1239, 1526, 1746, 1809, 1839, 3059, 3492 |
| MunI | CAATTG | 4 cut(s) | 171, 1092, 2539, 3408 |
| Mva1269I | GAATGC | 6 cut(s) | 256, 319, 889, 1832, 2258, 2393 |
| MvaI | CCWGG | 6 cut(s) | 501, 1526, 1809, 1839, 3059, 3492 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 595, 2377, 2648, 3413 |
| NciI | CCSGG | 2 cut(s) | 1239, 1746 |
| NcoI | CCATGG | 1 cut(s) | 3497 |
| NlaIV | GGNNCC | 5 cut(s) | 190, 994, 1686, 2061, 2742 |
| NmeAIII | GCCGAG | 2 cut(s) | 113, 133 |
| NsbI | TGCGCA | 1 cut(s) | 332 |
| NsiI | ATGCAT | 3 cut(s) | 958, 2644, 3295 |
| NspI | RCATGY | 1 cut(s) | 2998 |
| OliI | CACNNNNGTG | 1 cut(s) | 1431 |
| PagI | TCATGA | 2 cut(s) | 2329, 2491 |
| PceI | AGGCCT | 1 cut(s) | 2443 |
| PciSI | GCTCTTC | 2 cut(s) | 2274, 3509 |
| PctI | GAATGC | 6 cut(s) | 256, 319, 889, 1832, 2258, 2393 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1233 |
| PleI | GAGTC | 4 cut(s) | 475, 965, 1109, 2714 |
| PpsI | GAGTC | 4 cut(s) | 475, 965, 1109, 2714 |
| PpuMI | RGGWCCY | 1 cut(s) | 1685 |
| Psp124BI | GAGCTC | 1 cut(s) | 2796 |
| Psp1406I | AACGTT | 1 cut(s) | 912 |
| Psp5II | RGGWCCY | 1 cut(s) | 1685 |
| Psp6I | CCWGG | 6 cut(s) | 499, 1524, 1807, 1837, 3057, 3490 |
| PspFI | CCCAGC | 1 cut(s) | 3419 |
| PspGI | CCWGG | 6 cut(s) | 499, 1524, 1807, 1837, 3057, 3490 |
| PspN4I | GGNNCC | 5 cut(s) | 190, 994, 1686, 2061, 2742 |
| PspPI | GGNCC | 6 cut(s) | 917, 1685, 2240, 2369, 3494, 3533 |
| PspPPI | RGGWCCY | 1 cut(s) | 1685 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1262 |
| PsuI | RGATCY | 5 cut(s) | 10, 131, 734, 1163, 3144 |
| PvuII | CAGCTG | 1 cut(s) | 1289 |
| RsaI | GTAC | 7 cut(s) | 461, 1569, 1765, 1806, 2052, 3258, 3547 |
| RsaNI | GTAC | 7 cut(s) | 460, 1568, 1764, 1805, 2051, 3257, 3546 |
| RseI | CAYNNNNRTG | 3 cut(s) | 426, 1431, 3036 |
| SacI | GAGCTC | 1 cut(s) | 2796 |
| SapI | GCTCTTC | 2 cut(s) | 2274, 3509 |
| SaqAI | TTAA | 9 cut(s) | 324, 531, 710, 825, 1073, 2472, 3132, 3243, 3434 |
| Sau96I | GGNCC | 6 cut(s) | 917, 1685, 2240, 2369, 3494, 3533 |
| SchI | GAGTC | 4 cut(s) | 476, 965, 1109, 2714 |
| ScrFI | CCNGG | 8 cut(s) | 501, 1239, 1526, 1746, 1809, 1839, 3059, 3492 |
| SduI | GDGCHC | 4 cut(s) | 995, 2796, 2969, 3088 |
| SexAI | ACCWGGT | 1 cut(s) | 3490 |
| SinI | GGWCC | 4 cut(s) | 1685, 2240, 3494, 3533 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 426, 1431, 3036 |
| SmlI | CTYRAG | 5 cut(s) | 824, 1072, 2105, 2309, 3335 |
| SmoI | CTYRAG | 5 cut(s) | 824, 1072, 2105, 2309, 3335 |
| SseBI | AGGCCT | 1 cut(s) | 2443 |
| SsiI | CCGC | 8 cut(s) | 1041, 1136, 1182, 1421, 1544, 2117, 2651, 2761 |
| SspMI | CTAG | 5 cut(s) | 129, 135, 834, 2075, 3188 |
| SstI | GAGCTC | 1 cut(s) | 2796 |
| StuI | AGGCCT | 1 cut(s) | 2443 |
| StyD4I | CCNGG | 8 cut(s) | 499, 1237, 1524, 1744, 1807, 1837, 3057, 3490 |
| StyI | CCWWGG | 2 cut(s) | 591, 3497 |
| TaiI | ACGT | 3 cut(s) | 915, 3025, 3454 |
| TaqI | TCGA | 2 cut(s) | 83, 2294 |
| TatI | WGTACW | 5 cut(s) | 459, 1567, 1763, 3256, 3545 |
| TauI | GCSGC | 2 cut(s) | 1184, 1546 |
| Tru1I | TTAA | 9 cut(s) | 324, 531, 710, 825, 1073, 2472, 3132, 3243, 3434 |
| Tru9I | TTAA | 9 cut(s) | 324, 531, 710, 825, 1073, 2472, 3132, 3243, 3434 |
| TscAI | CASTG | 7 cut(s) | 583, 1540, 1713, 1954, 2557, 3088, 3444 |
| TspGWI | ACGGA | 4 cut(s) | 380, 2195, 2440, 2822 |
| TspRI | CASTG | 7 cut(s) | 583, 1540, 1713, 1954, 2557, 3088, 3444 |
| Vha464I | CTTAAG | 2 cut(s) | 824, 1072 |
| VneI | GTGCAC | 1 cut(s) | 3084 |
| VpaK11BI | GGWCC | 4 cut(s) | 1685, 2240, 3494, 3533 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3489 |
| XapI | RAATTY | 9 cut(s) | 715, 864, 1266, 1456, 1520, 2039, 3013, 3053, 3429 |
| XceI | RCATGY | 1 cut(s) | 2998 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1233 |
| XspI | CTAG | 5 cut(s) | 129, 135, 834, 2075, 3188 |
| Zsp2I | ATGCAT | 3 cut(s) | 958, 2644, 3295 |