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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3809 |
| AatII | GACGTC | 1 cut(s) | 2513 |
| Acc36I | ACCTGC | 4 cut(s) | 2268, 2524, 2776, 3069 |
| AccB1I | GGYRCC | 1 cut(s) | 2210 |
| AccBSI | CCGCTC | 1 cut(s) | 3783 |
| AccI | GTMKAC | 1 cut(s) | 589 |
| AccII | CGCG | 2 cut(s) | 610, 2179 |
| AclWI | GGATC | 8 cut(s) | 18, 135, 330, 1012, 1596, 1731, 3055, 3190 |
| AcoI | YGGCCR | 1 cut(s) | 939 |
| AcuI | CTGAAG | 6 cut(s) | 38, 440, 1683, 1935, 2169, 2358 |
| AcyI | GRCGYC | 2 cut(s) | 105, 2510 |
| AdeI | CACNNNGTG | 1 cut(s) | 3599 |
| AflII | CTTAAG | 1 cut(s) | 3767 |
| AflIII | ACRYGT | 1 cut(s) | 1531 |
| AgeI | ACCGGT | 1 cut(s) | 982 |
| AhlI | ACTAGT | 1 cut(s) | 428 |
| AjnI | CCWGG | 6 cut(s) | 574, 1297, 2091, 2833, 3043, 3443 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 532, 564 |
| AleI | CACNNNNGTG | 2 cut(s) | 1146, 1191 |
| Alw21I | GWGCWC | 4 cut(s) | 766, 1994, 2571, 3319 |
| Alw26I | GTCTC | 4 cut(s) | 419, 1522, 1740, 3933 |
| AlwI | GGATC | 8 cut(s) | 18, 135, 330, 1012, 1596, 1731, 3055, 3190 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 581, 1091, 2003, 3827 |
| AoxI | GGCC | 7 cut(s) | 680, 939, 1382, 1771, 2348, 2845, 3799 |
| ApeKI | GCWGC | 9 cut(s) | 265, 1826, 2635, 3383, 3473, 3639, 3709, 3854, 3866 |
| AseI | ATTAAT | 2 cut(s) | 1443, 3684 |
| AsiGI | ACCGGT | 1 cut(s) | 982 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 476, 2245, 2455, 3423 |
| AspLEI | GCGC | 3 cut(s) | 74, 610, 2683 |
| AspS9I | GGNCC | 5 cut(s) | 881, 1382, 1771, 3944, 3986 |
| AsuC2I | CCSGG | 3 cut(s) | 492, 3180, 4023 |
| AvaII | GGWCC | 3 cut(s) | 881, 3944, 3986 |
| AxyI | CCTNAGG | 1 cut(s) | 1092 |
| BalI | TGGCCA | 1 cut(s) | 941 |
| BanI | GGYRCC | 1 cut(s) | 2210 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 278, 310, 2802, 2834 |
| BbsI | GAAGAC | 5 cut(s) | 45, 948, 1910, 2346, 2393 |
| Bbv12I | GWGCWC | 4 cut(s) | 766, 1994, 2571, 3319 |
| BbvI | GCAGC | 9 cut(s) | 277, 1838, 2647, 3395, 3460, 3651, 3721, 3841, 3878 |
| BccI | CCATC | 6 cut(s) | 506, 1240, 1258, 2750, 3791, 3826 |
| BceAI | ACGGC | 2 cut(s) | 85, 1131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1772, 1806 |
| BciT130I | CCWGG | 6 cut(s) | 576, 1299, 2093, 2835, 3045, 3445 |
| BciVI | GTATCC | 2 cut(s) | 287, 3442 |
| BclI | TGATCA | 2 cut(s) | 3466, 3583 |
| BcnI | CCSGG | 3 cut(s) | 492, 3180, 4023 |
| BcoDI | GTCTC | 4 cut(s) | 419, 1522, 1740, 3933 |
| BcuI | ACTAGT | 1 cut(s) | 428 |
| BfmI | CTRYAG | 2 cut(s) | 3611, 3707 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 3767 |
| BfuAI | ACCTGC | 4 cut(s) | 2268, 2524, 2776, 3069 |
| BfuI | GTATCC | 2 cut(s) | 287, 3442 |
| BlpI | GCTNAGC | 2 cut(s) | 1988, 2781 |
| Bme1390I | CCNGG | 9 cut(s) | 492, 576, 1299, 2093, 2835, 3045, 3180, 3445, 4023 |
| Bme18I | GGWCC | 3 cut(s) | 881, 3944, 3986 |
| BmgT120I | GGNCC | 5 cut(s) | 881, 1382, 1771, 3944, 3986 |
| BmiI | GGNNCC | 4 cut(s) | 1303, 1383, 2212, 3036 |
| BmrFI | CCNGG | 9 cut(s) | 492, 576, 1299, 2093, 2835, 3045, 3180, 3445, 4023 |
| BmrI | ACTGGG | 1 cut(s) | 2907 |
| BmuI | ACTGGG | 1 cut(s) | 2907 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2397 |
| BpiI | GAAGAC | 5 cut(s) | 45, 948, 1910, 2346, 2393 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1088, 1120, 3047, 3079, 3476, 3508 |
| BpmI | CTGGAG | 2 cut(s) | 3036, 3891 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1988, 2781 |
| BpuEI | CTTGAG | 2 cut(s) | 686, 1532 |
| BpuMI | CCSGG | 3 cut(s) | 492, 3180, 4023 |
| BsaBI | GATNNNNATC | 3 cut(s) | 9, 26, 2442 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 2510 |
| BsaJI | CCNNGG | 5 cut(s) | 574, 2834, 3444, 3549, 4021 |
| BsaWI | WCCGGW | 1 cut(s) | 982 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1984, 2014, 2070, 2100 |
| Bse118I | RCCGGY | 2 cut(s) | 982, 3955 |
| Bse21I | CCTNAGG | 1 cut(s) | 1092 |
| Bse3DI | GCAATG | 2 cut(s) | 533, 1503 |
| Bse8I | GATNNNNATC | 3 cut(s) | 9, 26, 2442 |
| BseBI | CCWGG | 6 cut(s) | 576, 1299, 2093, 2835, 3045, 3445 |
| BseDI | CCNNGG | 5 cut(s) | 574, 2834, 3444, 3549, 4021 |
| BseJI | GATNNNNATC | 3 cut(s) | 9, 26, 2442 |
| BseMI | GCAATG | 2 cut(s) | 533, 1503 |
| BseMII | CTCAG | 6 cut(s) | 1083, 1253, 1979, 2642, 3078, 3099 |
| BseRI | GAGGAG | 3 cut(s) | 1109, 1714, 3071 |
| BseXI | GCAGC | 9 cut(s) | 277, 1838, 2647, 3395, 3460, 3651, 3721, 3841, 3878 |
| BseYI | CCCAGC | 2 cut(s) | 1421, 2157 |
| BsgI | GTGCAG | 1 cut(s) | 1845 |
| Bsh1236I | CGCG | 2 cut(s) | 610, 2179 |
| BshFI | GGCC | 7 cut(s) | 682, 941, 1384, 1773, 2350, 2847, 3801 |
| BshNI | GGYRCC | 1 cut(s) | 2210 |
| BshTI | ACCGGT | 1 cut(s) | 982 |
| BsiHKAI | GWGCWC | 4 cut(s) | 766, 1994, 2571, 3319 |
| BsiSI | CCGG | 6 cut(s) | 33, 491, 983, 3180, 3956, 4023 |
| BslFI | GGGAC | 3 cut(s) | 557, 1438, 2497 |
| BsmAI | GTCTC | 4 cut(s) | 419, 1522, 1740, 3933 |
| BsmFI | GGGAC | 3 cut(s) | 557, 1438, 2497 |
| BsmI | GAATGC | 1 cut(s) | 3606 |
| BsnI | GGCC | 7 cut(s) | 682, 941, 1384, 1773, 2350, 2847, 3801 |
| Bsp1286I | GDGCHC | 4 cut(s) | 766, 1994, 2571, 3319 |
| Bsp1407I | TGTACA | 2 cut(s) | 3904, 3998 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1988, 2781 |
| BspANI | GGCC | 7 cut(s) | 682, 941, 1384, 1773, 2350, 2847, 3801 |
| BspCNI | CTCAG | 6 cut(s) | 1084, 1254, 1980, 2641, 3077, 3098 |
| BspFNI | CGCG | 2 cut(s) | 610, 2179 |
| BspHI | TCATGA | 3 cut(s) | 1372, 2470, 2694 |
| BspLI | GGNNCC | 4 cut(s) | 1303, 1383, 2212, 3036 |
| BspMAI | CTGCAG | 2 cut(s) | 3615, 3711 |
| BspMI | ACCTGC | 4 cut(s) | 2268, 2524, 2776, 3069 |
| BspPI | GGATC | 8 cut(s) | 18, 135, 330, 1012, 1596, 1731, 3055, 3190 |
| BspQI | GCTCTTC | 1 cut(s) | 1659 |
| BspT107I | GGYRCC | 1 cut(s) | 2210 |
| BspTI | CTTAAG | 1 cut(s) | 3767 |
| BsrBI | CCGCTC | 1 cut(s) | 3783 |
| BsrDI | GCAATG | 2 cut(s) | 533, 1503 |
| BsrFI | RCCGGY | 2 cut(s) | 982, 3955 |
| BsrGI | TGTACA | 2 cut(s) | 3904, 3998 |
| BssAI | RCCGGY | 2 cut(s) | 982, 3955 |
| BssECI | CCNNGG | 5 cut(s) | 574, 2834, 3444, 3549, 4021 |
| BssNI | GRCGYC | 2 cut(s) | 105, 2510 |
| BssT1I | CCWWGG | 1 cut(s) | 3549 |
| Bst2UI | CCWGG | 6 cut(s) | 576, 1299, 2093, 2835, 3045, 3445 |
| Bst4CI | ACNGT | 6 cut(s) | 793, 1429, 1778, 2382, 2906, 3431 |
| Bst6I | CTCTTC | 9 cut(s) | 269, 417, 462, 673, 1185, 1659, 2446, 2715, 2871 |
| BstACI | GRCGYC | 2 cut(s) | 105, 2510 |
| BstAFI | CTTAAG | 1 cut(s) | 3767 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 645, 3215, 3659 |
| BstAUI | TGTACA | 2 cut(s) | 3904, 3998 |
| BstC8I | GCNNGC | 8 cut(s) | 122, 546, 684, 1539, 1947, 2215, 2412, 3207 |
| BstEII | GGTNACC | 1 cut(s) | 1099 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3939 |
| BstFNI | CGCG | 2 cut(s) | 610, 2179 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 3 cut(s) | 74, 610, 2683 |
| BstMAI | GTCTC | 4 cut(s) | 419, 1522, 1740, 3933 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 554, 607, 636, 645, 1133, 2549, 3215, 3659, 3863 |
| BstNI | CCWGG | 6 cut(s) | 576, 1299, 2093, 2835, 3045, 3445 |
| BstNSI | RCATGY | 4 cut(s) | 548, 1535, 1928, 3543 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2397 |
| BstPI | GGTNACC | 1 cut(s) | 1099 |
| BstSCI | CCNGG | 9 cut(s) | 490, 574, 1297, 2091, 2833, 3043, 3178, 3443, 4021 |
| BstSFI | CTRYAG | 2 cut(s) | 3611, 3707 |
| BstUI | CGCG | 2 cut(s) | 610, 2179 |
| BstV1I | GCAGC | 9 cut(s) | 277, 1838, 2647, 3395, 3460, 3651, 3721, 3841, 3878 |
| BstV2I | GAAGAC | 5 cut(s) | 45, 948, 1910, 2346, 2393 |
| BstX2I | RGATCY | 3 cut(s) | 10, 140, 3047 |
| BstYI | RGATCY | 3 cut(s) | 10, 140, 3047 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1092 |
| BsuI | GTATCC | 2 cut(s) | 287, 3442 |
| BsuRI | GGCC | 7 cut(s) | 682, 941, 1384, 1773, 2350, 2847, 3801 |
| BtsI | GCAGTG | 3 cut(s) | 391, 646, 1141 |
| BtsIMutI | CAGTG | 9 cut(s) | 391, 646, 954, 1141, 2358, 2459, 2895, 2911, 3093 |
| BveI | ACCTGC | 4 cut(s) | 2268, 2524, 2776, 3069 |
| Cac8I | GCNNGC | 8 cut(s) | 122, 546, 684, 1539, 1947, 2215, 2412, 3207 |
| CaiI | CAGNNNCTG | 4 cut(s) | 581, 1091, 2003, 3827 |
| CciI | TCATGA | 3 cut(s) | 1372, 2470, 2694 |
| CfoI | GCGC | 3 cut(s) | 74, 610, 2683 |
| Cfr10I | RCCGGY | 2 cut(s) | 982, 3955 |
| Cfr13I | GGNCC | 5 cut(s) | 881, 1382, 1771, 3944, 3986 |
| CseI | GACGC | 1 cut(s) | 113 |
| CspAI | ACCGGT | 1 cut(s) | 982 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 139, 174, 607, 642, 3256, 3291, 3877, 3912 |
| DraI | TTTAAA | 2 cut(s) | 2493, 2587 |
| DraIII | CACNNNGTG | 1 cut(s) | 3599 |
| EaeI | YGGCCR | 1 cut(s) | 939 |
| Eam1104I | CTCTTC | 9 cut(s) | 269, 417, 462, 673, 1185, 1659, 2446, 2715, 2871 |
| EarI | CTCTTC | 9 cut(s) | 269, 417, 462, 673, 1185, 1659, 2446, 2715, 2871 |
| EciI | GGCGGA | 1 cut(s) | 1556 |
| Eco130I | CCWWGG | 1 cut(s) | 3549 |
| Eco147I | AGGCCT | 1 cut(s) | 682 |
| Eco32I | GATATC | 1 cut(s) | 2914 |
| Eco47I | GGWCC | 3 cut(s) | 881, 3944, 3986 |
| Eco57I | CTGAAG | 6 cut(s) | 38, 440, 1683, 1935, 2169, 2358 |
| Eco81I | CCTNAGG | 1 cut(s) | 1092 |
| Eco91I | GGTNACC | 1 cut(s) | 1099 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3939 |
| EcoO65I | GGTNACC | 1 cut(s) | 1099 |
| EcoRI | GAATTC | 2 cut(s) | 355, 3910 |
| EcoRII | CCWGG | 6 cut(s) | 574, 1297, 2091, 2833, 3043, 3443 |
| EcoRV | GATATC | 1 cut(s) | 2914 |
| EcoT14I | CCWWGG | 1 cut(s) | 3549 |
| EcoT22I | ATGCAT | 1 cut(s) | 1138 |
| ErhI | CCWWGG | 1 cut(s) | 3549 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 301, 333, 3786, 3818 |
| FaqI | GGGAC | 3 cut(s) | 557, 1438, 2497 |
| FauI | CCCGC | 4 cut(s) | 270, 577, 1530, 2236 |
| FauNDI | CATATG | 1 cut(s) | 1054 |
| FbaI | TGATCA | 2 cut(s) | 3466, 3583 |
| FblI | GTMKAC | 1 cut(s) | 589 |
| GlaI | GCGC | 3 cut(s) | 73, 609, 2682 |
| GsaI | CCCAGC | 2 cut(s) | 1425, 2161 |
| GsuI | CTGGAG | 2 cut(s) | 3036, 3891 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 7 cut(s) | 682, 941, 1384, 1773, 2350, 2847, 3801 |
| HapII | CCGG | 6 cut(s) | 33, 491, 983, 3180, 3956, 4023 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 3 cut(s) | 74, 610, 2683 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 2510 |
| Hin6I | GCGC | 3 cut(s) | 72, 608, 2681 |
| HinP1I | GCGC | 3 cut(s) | 72, 608, 2681 |
| HincII | GTYRAC | 1 cut(s) | 3361 |
| HindII | GTYRAC | 1 cut(s) | 3361 |
| HindIII | AAGCTT | 2 cut(s) | 1284, 2412 |
| HpaII | CCGG | 6 cut(s) | 33, 491, 983, 3180, 3956, 4023 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 107, 2512 |
| HpyCH4III | ACNGT | 6 cut(s) | 793, 1429, 1778, 2382, 2906, 3431 |
| HpyCH4IV | ACGT | 3 cut(s) | 786, 2510, 2733 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 554, 607, 636, 645, 1133, 2549, 3215, 3659, 3863 |
| HpySE526I | ACGT | 3 cut(s) | 786, 2510, 2733 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 2510 |
| HspAI | GCGC | 3 cut(s) | 72, 608, 2681 |
| Ksp22I | TGATCA | 2 cut(s) | 3466, 3583 |
| LguI | GCTCTTC | 1 cut(s) | 1659 |
| LmnI | GCTCC | 4 cut(s) | 1307, 2005, 3314, 3780 |
| Lsp1109I | GCAGC | 9 cut(s) | 277, 1838, 2647, 3395, 3460, 3651, 3721, 3841, 3878 |
| MaeII | ACGT | 3 cut(s) | 786, 2510, 2733 |
| MaeIII | GTNAC | 4 cut(s) | 787, 985, 1099, 1411 |
| MbiI | CCGCTC | 1 cut(s) | 3783 |
| MfeI | CAATTG | 3 cut(s) | 2015, 2562, 3858 |
| MflI | RGATCY | 3 cut(s) | 10, 140, 3047 |
| MhlI | GDGCHC | 4 cut(s) | 766, 1994, 2571, 3319 |
| MlsI | TGGCCA | 1 cut(s) | 941 |
| MluNI | TGGCCA | 1 cut(s) | 941 |
| MlyI | GAGTC | 7 cut(s) | 38, 826, 2195, 2297, 3068, 3485, 3494 |
| MmeI | TCCRAC | 2 cut(s) | 154, 947 |
| Mox20I | TGGCCA | 1 cut(s) | 941 |
| Mph1103I | ATGCAT | 1 cut(s) | 1138 |
| MroXI | GAANNNNTTC | 4 cut(s) | 476, 2245, 2455, 3423 |
| MscI | TGGCCA | 1 cut(s) | 941 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1146, 1191, 1324 |
| Msp20I | TGGCCA | 1 cut(s) | 941 |
| MspA1I | CMGCKG | 2 cut(s) | 1829, 3869 |
| MspCI | CTTAAG | 1 cut(s) | 3767 |
| MspI | CCGG | 6 cut(s) | 33, 491, 983, 3180, 3956, 4023 |
| MspR9I | CCNGG | 9 cut(s) | 492, 576, 1299, 2093, 2835, 3045, 3180, 3445, 4023 |
| MunI | CAATTG | 3 cut(s) | 2015, 2562, 3858 |
| Mva1269I | GAATGC | 1 cut(s) | 3606 |
| MvaI | CCWGG | 6 cut(s) | 576, 1299, 2093, 2835, 3045, 3445 |
| MvnI | CGCG | 2 cut(s) | 610, 2179 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 554, 607, 636, 645, 1133, 2549, 3215, 3659, 3863 |
| NciI | CCSGG | 3 cut(s) | 492, 3180, 4023 |
| NdeI | CATATG | 1 cut(s) | 1054 |
| NlaIV | GGNNCC | 4 cut(s) | 1303, 1383, 2212, 3036 |
| NmuCI | GTSAC | 3 cut(s) | 787, 1099, 1411 |
| NsiI | ATGCAT | 1 cut(s) | 1138 |
| NspI | RCATGY | 4 cut(s) | 548, 1535, 1928, 3543 |
| OliI | CACNNNNGTG | 2 cut(s) | 1146, 1191 |
| PaeI | GCATGC | 1 cut(s) | 548 |
| PagI | TCATGA | 3 cut(s) | 1372, 2470, 2694 |
| PceI | AGGCCT | 1 cut(s) | 682 |
| PciI | ACATGT | 1 cut(s) | 1531 |
| PciSI | GCTCTTC | 1 cut(s) | 1659 |
| PctI | GAATGC | 1 cut(s) | 3606 |
| PdmI | GAANNNNTTC | 4 cut(s) | 476, 2245, 2455, 3423 |
| PfeI | GAWTC | 9 cut(s) | 5, 443, 487, 1765, 1918, 2153, 2504, 2830, 3521 |
| PfoI | TCCNGGA | 1 cut(s) | 490 |
| PinAI | ACCGGT | 1 cut(s) | 982 |
| PleI | GAGTC | 7 cut(s) | 38, 825, 2194, 2297, 3067, 3485, 3493 |
| PpsI | GAGTC | 7 cut(s) | 38, 825, 2194, 2297, 3067, 3485, 3493 |
| PscI | ACATGT | 1 cut(s) | 1531 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2397 |
| PshBI | ATTAAT | 2 cut(s) | 1443, 3684 |
| PsiI | TTATAA | 1 cut(s) | 3809 |
| Psp6I | CCWGG | 6 cut(s) | 574, 1297, 2091, 2833, 3043, 3443 |
| PspEI | GGTNACC | 1 cut(s) | 1099 |
| PspFI | CCCAGC | 2 cut(s) | 1421, 2157 |
| PspGI | CCWGG | 6 cut(s) | 574, 1297, 2091, 2833, 3043, 3443 |
| PspN4I | GGNNCC | 4 cut(s) | 1303, 1383, 2212, 3036 |
| PspPI | GGNCC | 5 cut(s) | 881, 1382, 1771, 3944, 3986 |
| PstI | CTGCAG | 2 cut(s) | 3615, 3711 |
| PstNI | CAGNNNCTG | 4 cut(s) | 581, 1091, 2003, 3827 |
| PsuI | RGATCY | 3 cut(s) | 10, 140, 3047 |
| PvuII | CAGCTG | 2 cut(s) | 1829, 3869 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1146, 1191, 1324 |
| SapI | GCTCTTC | 1 cut(s) | 1659 |
| Sau96I | GGNCC | 5 cut(s) | 881, 1382, 1771, 3944, 3986 |
| SchI | GAGTC | 7 cut(s) | 38, 826, 2195, 2297, 3068, 3485, 3494 |
| ScrFI | CCNGG | 9 cut(s) | 492, 576, 1299, 2093, 2835, 3045, 3180, 3445, 4023 |
| SduI | GDGCHC | 4 cut(s) | 766, 1994, 2571, 3319 |
| SfcI | CTRYAG | 2 cut(s) | 3611, 3707 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3955 |
| SinI | GGWCC | 3 cut(s) | 881, 3944, 3986 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1146, 1191, 1324 |
| SmlI | CTYRAG | 3 cut(s) | 701, 1547, 3767 |
| SmoI | CTYRAG | 3 cut(s) | 701, 1547, 3767 |
| SpeI | ACTAGT | 1 cut(s) | 428 |
| SphI | GCATGC | 1 cut(s) | 548 |
| SseBI | AGGCCT | 1 cut(s) | 682 |
| SspI | AATATT | 3 cut(s) | 1441, 1657, 2323 |
| StuI | AGGCCT | 1 cut(s) | 682 |
| StyD4I | CCNGG | 9 cut(s) | 490, 574, 1297, 2091, 2833, 3043, 3178, 3443, 4021 |
| StyI | CCWWGG | 1 cut(s) | 3549 |
| TaaI | ACNGT | 6 cut(s) | 793, 1429, 1778, 2382, 2906, 3431 |
| TaiI | ACGT | 3 cut(s) | 789, 2513, 2736 |
| TaqI | TCGA | 4 cut(s) | 24, 325, 1782, 2507 |
| TatI | WGTACW | 7 cut(s) | 497, 914, 1757, 1895, 3154, 3904, 3998 |
| TauI | GCSGC | 3 cut(s) | 95, 1387, 1496 |
| TfiI | GAWTC | 9 cut(s) | 5, 443, 487, 1765, 1918, 2153, 2504, 2830, 3521 |
| TscAI | CASTG | 9 cut(s) | 391, 646, 954, 1148, 2358, 2466, 2902, 2911, 3093 |
| TseFI | GTSAC | 3 cut(s) | 787, 1099, 1411 |
| TseI | GCWGC | 9 cut(s) | 265, 1826, 2635, 3383, 3473, 3639, 3709, 3854, 3866 |
| Tsp45I | GTSAC | 3 cut(s) | 787, 1099, 1411 |
| TspGWI | ACGGA | 4 cut(s) | 607, 1459, 3348, 3979 |
| TspRI | CASTG | 9 cut(s) | 391, 646, 954, 1148, 2358, 2466, 2902, 2911, 3093 |
| Vha464I | CTTAAG | 1 cut(s) | 3767 |
| VpaK11BI | GGWCC | 3 cut(s) | 881, 3944, 3986 |
| VspI | ATTAAT | 2 cut(s) | 1443, 3684 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3939 |
| XbaI | TCTAGA | 1 cut(s) | 1862 |
| XceI | RCATGY | 4 cut(s) | 548, 1535, 1928, 3543 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 934 |
| XmiI | GTMKAC | 1 cut(s) | 589 |
| XmnI | GAANNNNTTC | 4 cut(s) | 476, 2245, 2455, 3423 |
| ZraI | GACGTC | 1 cut(s) | 2511 |
| Zsp2I | ATGCAT | 1 cut(s) | 1138 |