Rroxscaffold_1G00019380

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
23674857 .. 23681291
6435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00019380.1

Sequence Viewer

Length: 3579 bp
ATGATTACTGGGAGTGTAAACTCTAGTGGGTCGTTGTCAGTCATCCATGAAGAGACTAGTTGTGGTACTGATTCAGCATATCTTCAGGGGCTTGAAGAAAACTTAGTCAAGGAGATTCCGGGAAGTACTCCAAAGAAAGATGGGATTACTGGTGGCAGACCATTGCCAAAGCATGCTTCACCAGCTAGAGATAATGCAGTACCAGGTTCTGCGGGCAGACGGAAGGTGCTATCAGCGCGTGATAGCAATAGAAGTGGCTCCAAACGCAGTGGTTGCCCTCGCCCTATGGCTTCCTCTTCATTGAAAAGGCCTGCAAATGTGAATACTCTCAAGTCAGCAACTAAAGAACCAAAAATTTCTAAGCTACCTGTTCCAAAACCTGTTCCATGTGCTCTCTCTAAGACATCCAAGAACGTGACGGTTGGTGCAAGTGATCTAAAACAGAGTCAGATTGCTCATCCTGTCAATTTGAACAACACCAAAACTGGTCTAAATAATGCAAAAGTTGGTCCTATGGGAAAATCCTTGACTGCTAAAAGTTGTACTCGTCCAACTAGAAGAAATGTGGCCAGTTCAGTGAAGTCTTCACCAACCAAAGCACAATGTCCACTGGTTACAGAAGCAAAAAATGGATCAGAGGTTATCACAAAACAAGCACTTCCTTCTACCAGTCATACATCATATGGCCGTGATGACATATCCAGAAAAATTGCAGTTCCTGATGAGGTGACCTCAAAACAAGCACTTCCTTCTGCCAGTCATGCATCATACTGCCGTGATGACAGACTTAGAAAAGTTGCAGTTCCTCTTCCTCACACTGGTGTGAACTTGCCACATACTCAACTCCAAACTTCAAAACCATCAGGTTTGCGGATGCCATCACCCTCGCTGAGTTTCTTTAATCAGCAAAAAGCTTCTTCTTTACCTGGCTCCCATAGGAGCAGTTCACAACCATGCAAAATTCCTAAGTTTAGGCAAATTGGTTCTGTAAATCTAAGTCATGAATTGAGGCCGCCTTCATTTGGGAAAATGCCAAATGTGACCAATGCTGGGACAGTAATGGGAAATATTAATGTTCAGTGTTCAAGTTCAAGTTCCGTTCTATCTGATACTAGCCCTGCGGCAATGGACAAAGTGGATTCAGTCTCGCAAATAAGACATGTGCAGGCGGAACTCAAGGTATCATCTAAGTCAAAAGGTTTTGGTATGACAGAGGATCACAGAAAGTTAAATATCATACCTGTTCATGGCTACCAACAATCTACCCCACAAGCAGAACCAAATATTACTGAAGAGCTTTCTTACATGGAAGATGTAGAATTTCAGAGGAGTGATGATAAATGTCTAATGGATCAGGGATTGTCTCTTGCATTTCCTCCAAAAAGTACAGAGACTCAGGGCCACAGTTTCGAGAAGGTTGCAGATGCTAGTCCAGAAGTCCAAAATGGTAGTGCAGCTGAATACAAAATAGTTGATGCCTTCTCTTACTCTAGATGTGAAGATCAAGCAAAAGATGAGATTAGTACATTGAAGACAATGAGTAGGAATCTGCATGTGGAAGATGCACAAATGCTGGCTTCAGATAGAAAAACAGATGAAATCAATGATGTCAAGCCGAGCACATCAGCTCCTGATAATTGGCAATTGGTGAAAGTTGATAGTGAAAAACCTGAACACCAAGACCTTTCAAATCCCTGCTACATTGGAGAACAAGTTTACCAGGATGAAAGATTAAACTTAAATGATTGTGTATTGGATGGTTTTGATGTTCTTCCTGAAGATTCCCAGCAGAACAATGTTCTTCTGCGTTTTGAGTCAAATGAAGCAGAAGGAAATGGTGCCGGCCCAATTGAACCCGCAATTTCCAGAAACCTTTCTGTTATACCACCTGTGATGCTTGATTGCAGGTTTAATGAAGTGGAAATGGTGGACTCCCCTAGTGTGGAGAATATTGCATCGGTATCTGAAGACAATAGGCCAGTGGTTGAGAACCACAACCTTGATACACAGTTCAGGAATGACATTCGTCTTCATGGGCAAGCTTCTTTGGAATTGCACAACATGGATGAAGATCAGAGAAGAGTTTCACTGACTGCTCATGATATTAAGACAACTTCTTTAAAAAGTGGAGATTCGACGTCCCAACTAAACCTGACAATGCAGGTTGAGGCTGGTTCTGCAAAAGACACAATTGAGCACAGATACTTGGGATTTAAAAGTTCTGATTTATCTGTTGAAAGTAGCTGTCATGCCCCTCGGTTGCAGCCTGAATATGACATAATCTCTTGCCACCAAGATACTTCAATGGCGCAAATTAAATTCATGAGTGATGAAAGAAATATAATTGAAGAGGAAACTAACGTGCCAAGTGGTGAATTTGATGATGGCAAACGCAATGTTCAACAGGCTAAGCAGGTTATGTCTTGCTTTAGGGCAGAAGCTAGAATACTGAACTGGAATCCAGGGGATTATGGCCTTTCATTTGAAGGTAGCAAATCTGTGGAAGAGTGCCACAAATATAACACTGGGAACAGTGAAGATTTCAGTTTGAAATGGATTGCAAAGCCCCCTGATCTATCTAAGCATGAAATCTTGGAAGAAGCAAATAAACAAGTTGATGAAGGTAATGATGTGATTAAGGAACCCCTACCTGGATCTCCAGAGGAGCCCTCAGTTGCAAATTGCAGGTACTCAGTGGGTTTTAATAATGCACATAAACTATCTGGATGTCCGGAGCTTCAGCATCCAAATATTGTAGAAGTACAAGTATCACAGGAATTTAAGCCCAGATCAGATTTGAATGGAACTTTGCTTGCAAATAATGCTTCCTGTAAGGAATGTGAGGAAACTGATGAGCTTGTTTTAGATCGGAATGATTCCTGTGGAAGTGAACCCAAGTGTTCAGATGCTTGTATGGAAGTAGCACCAGCAATACCTGATGGCACACCTGATTTGGGGGGAAAGGTTGACAACTCACAGCTGGAACTTGCAGTGACTAGAAGTTCCATGGTTGAGCAATCACCAGAAAATGTTCATGGTTTTACAGAGTTCAGGGATACCAATAGGCTATGTGATCAAGCTGCTTCCGTGGAGTCTGACTCATCTGCAAAGACAACCAATGAAGAAGATTCTGTGCAAACTTTGGCATGTAATTCCTTGGAAGGGAAACTAAGGTCATCTCTTATTTCTGATCAGACATCACCAAGTGGAAGCATTCTGCAGGATAATGAAGTTAATGTATTGAGCAGCAACACTTTGACAGAGGATGCTGAAACTAATATCTTGAACATTAATCATACTCTTGACGATGAACTGCAGCAAGGATTAGATGATACCATGTACCCACCAAAAGAGAAGGATGCAACAAAAGAGCTTAAGAAGTCTAGGAGCGGAAGGAATGAAGATGGCCTTGTTATAAAACTTCCATTAGATGCTGTTCCATTCTCTGATGAATGGTTAGCTGCAATTGAAGCAGCTGGAGAGGTGAAACGGAAACAAAATCAAGTAATTGGACCATTTGATTGTACAAAACATACCAACAACCCCCCGGTTCTCAATAACCTAAGAGGGTTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1192

Amino Acids

129.95

Weight (kDa)

5.3

Isoelectric Point (pI)

55.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3416
AatII GACGTC 1 cut(s) 2141
Acc36I ACCTGC 4 cut(s) 1896, 2152, 2404, 2676
AccB1I GGYRCC 1 cut(s) 1838
AccBSI CCGCTC 1 cut(s) 3390
AccII CGCG 1 cut(s) 238
AccIII TCCGGA 1 cut(s) 2731
AciI CCGC 7 cut(s) 212, 871, 1013, 1121, 1169, 1857, 3390
AclWI GGATC 4 cut(s) 640, 1224, 1359, 2662
AcoI YGGCCR 2 cut(s) 567, 685
AcsI RAATTY 6 cut(s) 354, 960, 1319, 2318, 2375, 2777
AcuI CTGAAG 6 cut(s) 68, 1311, 1563, 1797, 1986, 2723
AcyI GRCGYC 1 cut(s) 2138
AdeI CACNNNGTG 1 cut(s) 3206
AfiI CCNNNNNNNGG 8 cut(s) 818, 1022, 1050, 1247, 1942, 2651, 2954, 3162
AflII CTTAAG 1 cut(s) 3374
AflIII ACRYGT 1 cut(s) 1159
AhlI ACTAGT 1 cut(s) 56
AjnI CCWGG 5 cut(s) 202, 925, 1719, 2461, 2650
AjuI GAANNNNNNNTTGG 2 cut(s) 160, 192
AleI CACNNNNGTG 2 cut(s) 819, 821
Alw21I GWGCWC 3 cut(s) 394, 1622, 2199
Alw26I GTCTC 4 cut(s) 47, 1150, 1368, 1385
AlwI GGATC 4 cut(s) 640, 1224, 1359, 2662
AlwNI CAGNNNCTG 3 cut(s) 209, 719, 1631
Aor13HI TCCGGA 1 cut(s) 2731
AoxI GGCC 9 cut(s) 308, 567, 685, 1010, 1399, 1843, 1976, 2473, 3406
ApeKI GCWGC 7 cut(s) 1454, 2263, 3080, 3246, 3316, 3461, 3473
ApoI RAATTY 6 cut(s) 354, 960, 1319, 2318, 2375, 2777
AseI ATTAAT 2 cut(s) 1071, 3291
Asp700I GAANNNNTTC 3 cut(s) 1873, 2083, 3030
AspLEI GCGC 2 cut(s) 238, 2311
AspS9I GGNCC 4 cut(s) 509, 1399, 1844, 3512
AsuC2I CCSGG 2 cut(s) 120, 3548
AsuHPI GGTGA 9 cut(s) 171, 579, 739, 873, 1660, 2384, 3012, 3192, 3496
AvaII GGWCC 2 cut(s) 509, 3512
BalI TGGCCA 1 cut(s) 569
BanI GGYRCC 1 cut(s) 1838
BanII GRGCYC 1 cut(s) 2670
BarI GAAGNNNNNNTAC 2 cut(s) 2430, 2462
BbsI GAAGAC 4 cut(s) 576, 1538, 1974, 2021
Bbv12I GWGCWC 3 cut(s) 394, 1622, 2199
BbvI GCAGC 7 cut(s) 1466, 2275, 3067, 3258, 3328, 3448, 3485
BccI CCATC 7 cut(s) 134, 868, 886, 1751, 2378, 2933, 3398
BceAI ACGGC 2 cut(s) 672, 759
BcgI CGANNNNNNTGC 2 cut(s) 1400, 1434
BciT130I CCWGG 5 cut(s) 204, 927, 1721, 2463, 2652
BciVI GTATCC 1 cut(s) 3049
BclI TGATCA 2 cut(s) 3073, 3190
BcnI CCSGG 2 cut(s) 120, 3548
BcoDI GTCTC 4 cut(s) 47, 1150, 1368, 1385
BcuI ACTAGT 1 cut(s) 56
BfmI CTRYAG 2 cut(s) 3218, 3314
BfrI CTTAAG 1 cut(s) 3374
BfuAI ACCTGC 4 cut(s) 1896, 2152, 2404, 2676
BfuI GTATCC 1 cut(s) 3049
BisI GCNGC 9 cut(s) 1013, 1122, 1455, 2264, 3081, 3247, 3317, 3462, 3474
BlpI GCTNAGC 1 cut(s) 2409
BlsI GCNGC 9 cut(s) 1014, 1123, 1456, 2265, 3082, 3248, 3318, 3463, 3475
BmcAI AGTACT 1 cut(s) 127
Bme1390I CCNGG 7 cut(s) 120, 204, 927, 1721, 2463, 2652, 3548
Bme18I GGWCC 2 cut(s) 509, 3512
BmgT120I GGNCC 4 cut(s) 509, 1399, 1844, 3512
BmiI GGNNCC 5 cut(s) 259, 931, 1840, 2643, 2667
BmrFI CCNGG 7 cut(s) 120, 204, 927, 1721, 2463, 2652, 3548
BmrI ACTGGG 2 cut(s) 18, 2535
BmuI ACTGGG 2 cut(s) 18, 2535
BoxI GACNNNNGTC 1 cut(s) 2025
BpiI GAAGAC 4 cut(s) 576, 1538, 1974, 2021
BplI GAGNNNNNCTC 6 cut(s) 716, 748, 2654, 2686, 3083, 3115
BpmI CTGGAG 2 cut(s) 2643, 3498
Bpu1102I GCTNAGC 1 cut(s) 2409
BpuEI CTTGAG 2 cut(s) 314, 1160
BpuMI CCSGG 2 cut(s) 120, 3548
BsaBI GATNNNNATC 1 cut(s) 2070
BsaHI GRCGYC 1 cut(s) 2138
BsaJI CCNNGG 6 cut(s) 2255, 2462, 3006, 3087, 3156, 3546
BsaWI WCCGGW 1 cut(s) 2731
BsaXI ACNNNNNCTCC 4 cut(s) 1612, 1642, 1698, 1728
Bsc4I CCNNNNNNNGG 8 cut(s) 818, 1022, 1050, 1247, 1942, 2651, 2954, 3162
Bse118I RCCGGY 1 cut(s) 1841
Bse3DI GCAATG 3 cut(s) 161, 1131, 2401
Bse8I GATNNNNATC 1 cut(s) 2070
BseAI TCCGGA 1 cut(s) 2731
BseBI CCWGG 5 cut(s) 204, 927, 1721, 2463, 2652
BseDI CCNNGG 6 cut(s) 2255, 2462, 3006, 3087, 3156, 3546
BseJI GATNNNNATC 1 cut(s) 2070
BseLI CCNNNNNNNGG 8 cut(s) 818, 1022, 1050, 1247, 1942, 2651, 2954, 3162
BseMI GCAATG 3 cut(s) 161, 1131, 2401
BseMII CTCAG 4 cut(s) 881, 1409, 2685, 2706
BseRI GAGGAG 2 cut(s) 1342, 2678
BseXI GCAGC 7 cut(s) 1466, 2275, 3067, 3258, 3328, 3448, 3485
BseYI CCCAGC 2 cut(s) 1049, 1785
BsgI GTGCAG 2 cut(s) 1184, 1473
Bsh1236I CGCG 1 cut(s) 238
BshFI GGCC 9 cut(s) 310, 569, 687, 1012, 1401, 1845, 1978, 2475, 3408
BshNI GGYRCC 1 cut(s) 1838
BsiHKAI GWGCWC 3 cut(s) 394, 1622, 2199
BsiSI CCGG 4 cut(s) 119, 1842, 2732, 3548
BslFI GGGAC 2 cut(s) 1066, 2125
BslI CCNNNNNNNGG 8 cut(s) 818, 1022, 1050, 1247, 1942, 2651, 2954, 3162
BsmAI GTCTC 4 cut(s) 47, 1150, 1368, 1385
BsmFI GGGAC 2 cut(s) 1066, 2125
BsmI GAATGC 1 cut(s) 3213
BsnI GGCC 9 cut(s) 310, 569, 687, 1012, 1401, 1845, 1978, 2475, 3408
Bsp1286I GDGCHC 4 cut(s) 394, 1622, 2199, 2670
Bsp13I TCCGGA 1 cut(s) 2731
Bsp1407I TGTACA 1 cut(s) 3524
Bsp1720I GCTNAGC 1 cut(s) 2409
Bsp19I CCATGG 1 cut(s) 3006
BspACI CCGC 7 cut(s) 212, 871, 1013, 1121, 1169, 1857, 3390
BspANI GGCC 9 cut(s) 310, 569, 687, 1012, 1401, 1845, 1978, 2475, 3408
BspCNI CTCAG 4 cut(s) 882, 1408, 2684, 2705
BspEI TCCGGA 1 cut(s) 2731
BspFNI CGCG 1 cut(s) 238
BspHI TCATGA 3 cut(s) 1000, 2098, 2322
BspLI GGNNCC 5 cut(s) 259, 931, 1840, 2643, 2667
BspMAI CTGCAG 2 cut(s) 3222, 3318
BspMI ACCTGC 4 cut(s) 1896, 2152, 2404, 2676
BspPI GGATC 4 cut(s) 640, 1224, 1359, 2662
BspQI GCTCTTC 1 cut(s) 1287
BspT107I GGYRCC 1 cut(s) 1838
BspTI CTTAAG 1 cut(s) 3374
BsrBI CCGCTC 1 cut(s) 3390
BsrDI GCAATG 3 cut(s) 161, 1131, 2401
BsrFI RCCGGY 1 cut(s) 1841
BsrGI TGTACA 1 cut(s) 3524
BssAI RCCGGY 1 cut(s) 1841
BssECI CCNNGG 6 cut(s) 2255, 2462, 3006, 3087, 3156, 3546
BssNI GRCGYC 1 cut(s) 2138
BssT1I CCWWGG 2 cut(s) 3006, 3156
Bst2UI CCWGG 5 cut(s) 204, 927, 1721, 2463, 2652
Bst4CI ACNGT 5 cut(s) 421, 1057, 1406, 2010, 2534
Bst6I CTCTTC 7 cut(s) 45, 301, 813, 1287, 2074, 2343, 2499
BstACI GRCGYC 1 cut(s) 2138
BstAFI CTTAAG 1 cut(s) 3374
BstAPI GCANNNNNTGC 2 cut(s) 273, 2822
BstAUI TGTACA 1 cut(s) 3524
BstC8I GCNNGC 8 cut(s) 174, 214, 312, 1167, 1575, 1843, 2040, 2814
BstDSI CCRYGG 2 cut(s) 3006, 3087
BstEII GGTNACC 1 cut(s) 727
BstFNI CGCG 1 cut(s) 238
BstHHI GCGC 2 cut(s) 238, 2311
BstMAI GTCTC 4 cut(s) 47, 1150, 1368, 1385
BstMWI GCNNNNNNNGC 8 cut(s) 182, 235, 264, 273, 761, 2177, 2822, 3470
BstNI CCWGG 5 cut(s) 204, 927, 1721, 2463, 2652
BstNSI RCATGY 4 cut(s) 176, 1163, 1556, 3150
BstPAI GACNNNNGTC 1 cut(s) 2025
BstPI GGTNACC 1 cut(s) 727
BstSCI CCNGG 7 cut(s) 118, 202, 925, 1719, 2461, 2650, 3546
BstSFI CTRYAG 2 cut(s) 3218, 3314
BstUI CGCG 1 cut(s) 238
BstV1I GCAGC 7 cut(s) 1466, 2275, 3067, 3258, 3328, 3448, 3485
BstV2I GAAGAC 4 cut(s) 576, 1538, 1974, 2021
BstX2I RGATCY 1 cut(s) 2654
BstYI RGATCY 1 cut(s) 2654
BsuI GTATCC 1 cut(s) 3049
BsuRI GGCC 9 cut(s) 310, 569, 687, 1012, 1401, 1845, 1978, 2475, 3408
BtgI CCRYGG 2 cut(s) 3006, 3087
BtsI GCAGTG 2 cut(s) 274, 2997
BveI ACCTGC 4 cut(s) 1896, 2152, 2404, 2676
Cac8I GCNNGC 8 cut(s) 174, 214, 312, 1167, 1575, 1843, 2040, 2814
CaiI CAGNNNCTG 3 cut(s) 209, 719, 1631
CciI TCATGA 3 cut(s) 1000, 2098, 2322
CfoI GCGC 2 cut(s) 238, 2311
Cfr10I RCCGGY 1 cut(s) 1841
Cfr13I GGNCC 4 cut(s) 509, 1399, 1844, 3512
CsiI ACCWGGT 1 cut(s) 202
CspCI CAANNNNNGTGG 4 cut(s) 235, 250, 270, 285
DraI TTTAAA 2 cut(s) 2121, 2215
DraIII CACNNNGTG 1 cut(s) 3206
EaeI YGGCCR 2 cut(s) 567, 685
Eam1104I CTCTTC 7 cut(s) 45, 301, 813, 1287, 2074, 2343, 2499
EarI CTCTTC 7 cut(s) 45, 301, 813, 1287, 2074, 2343, 2499
EciI GGCGGA 1 cut(s) 1184
Eco130I CCWWGG 2 cut(s) 3006, 3156
Eco147I AGGCCT 1 cut(s) 310
Eco24I GRGCYC 1 cut(s) 2670
Eco47I GGWCC 2 cut(s) 509, 3512
Eco57I CTGAAG 6 cut(s) 68, 1311, 1563, 1797, 1986, 2723
Eco91I GGTNACC 1 cut(s) 727
EcoO65I GGTNACC 1 cut(s) 727
EcoRII CCWGG 5 cut(s) 202, 925, 1719, 2461, 2650
EcoT14I CCWWGG 2 cut(s) 3006, 3156
EcoT22I ATGCAT 1 cut(s) 766
EcoT38I GRGCYC 1 cut(s) 2670
ErhI CCWWGG 2 cut(s) 3006, 3156
FalI AAGNNNNNCTT 2 cut(s) 3393, 3425
FaqI GGGAC 2 cut(s) 1066, 2125
FauI CCCGC 2 cut(s) 205, 1864
FauNDI CATATG 1 cut(s) 682
FbaI TGATCA 2 cut(s) 3073, 3190
Fnu4HI GCNGC 9 cut(s) 1013, 1122, 1455, 2264, 3081, 3247, 3317, 3462, 3474
FriOI GRGCYC 1 cut(s) 2670
Fsp4HI GCNGC 9 cut(s) 1013, 1122, 1455, 2264, 3081, 3247, 3317, 3462, 3474
GlaI GCGC 2 cut(s) 237, 2310
GluI GCNGC 9 cut(s) 1013, 1122, 1455, 2264, 3081, 3247, 3317, 3462, 3474
GsaI CCCAGC 2 cut(s) 1053, 1789
GsuI CTGGAG 2 cut(s) 2643, 3498
HaeIII GGCC 9 cut(s) 310, 569, 687, 1012, 1401, 1845, 1978, 2475, 3408
HapII CCGG 4 cut(s) 119, 1842, 2732, 3548
HhaI GCGC 2 cut(s) 238, 2311
Hin1I GRCGYC 1 cut(s) 2138
Hin6I GCGC 2 cut(s) 236, 2309
HinP1I GCGC 2 cut(s) 236, 2309
HincII GTYRAC 1 cut(s) 2968
HindII GTYRAC 1 cut(s) 2968
HindIII AAGCTT 2 cut(s) 912, 2040
HpaII CCGG 4 cut(s) 119, 1842, 2732, 3548
HphI GGTGA 9 cut(s) 171, 579, 739, 873, 1660, 2384, 3012, 3192, 3496
Hpy166II GTNNAC 8 cut(s) 19, 608, 826, 947, 1717, 1930, 2891, 2968
Hpy8I GTNNAC 8 cut(s) 19, 608, 826, 947, 1717, 1930, 2891, 2968
Hpy99I CGWCG 1 cut(s) 2140
HpyCH4III ACNGT 5 cut(s) 421, 1057, 1406, 2010, 2534
HpyCH4IV ACGT 3 cut(s) 414, 2138, 2361
HpyF10VI GCNNNNNNNGC 8 cut(s) 182, 235, 264, 273, 761, 2177, 2822, 3470
HpySE526I ACGT 3 cut(s) 414, 2138, 2361
Hsp92I GRCGYC 1 cut(s) 2138
HspAI GCGC 2 cut(s) 236, 2309
Kpn2I TCCGGA 1 cut(s) 2731
KroI GCCGGC 1 cut(s) 1841
KroNI GCCGGC 1 cut(s) 1843
Ksp22I TGATCA 2 cut(s) 3073, 3190
LguI GCTCTTC 1 cut(s) 1287
LmnI GCTCC 7 cut(s) 263, 935, 939, 1633, 2665, 2734, 3387
Lsp1109I GCAGC 7 cut(s) 1466, 2275, 3067, 3258, 3328, 3448, 3485
MabI ACCWGGT 1 cut(s) 202
MaeII ACGT 3 cut(s) 414, 2138, 2361
MaeIII GTNAC 5 cut(s) 415, 613, 727, 1039, 2992
MbiI CCGCTC 1 cut(s) 3390
MfeI CAATTG 4 cut(s) 1643, 1848, 2190, 3465
MflI RGATCY 1 cut(s) 2654
MhlI GDGCHC 4 cut(s) 394, 1622, 2199, 2670
MlsI TGGCCA 1 cut(s) 569
MluNI TGGCCA 1 cut(s) 569
MlyI GAGTC 6 cut(s) 454, 1387, 1823, 1925, 3092, 3101
MmeI TCCRAC 1 cut(s) 575
Mox20I TGGCCA 1 cut(s) 569
Mph1103I ATGCAT 1 cut(s) 766
MroI TCCGGA 1 cut(s) 2731
MroNI GCCGGC 1 cut(s) 1841
MroXI GAANNNNTTC 3 cut(s) 1873, 2083, 3030
MscI TGGCCA 1 cut(s) 569
MslI CAYNNNNRTG 3 cut(s) 819, 821, 952
Msp20I TGGCCA 1 cut(s) 569
MspA1I CMGCKG 3 cut(s) 1457, 2980, 3476
MspCI CTTAAG 1 cut(s) 3374
MspI CCGG 4 cut(s) 119, 1842, 2732, 3548
MspR9I CCNGG 7 cut(s) 120, 204, 927, 1721, 2463, 2652, 3548
MunI CAATTG 4 cut(s) 1643, 1848, 2190, 3465
Mva1269I GAATGC 1 cut(s) 3213
MvaI CCWGG 5 cut(s) 204, 927, 1721, 2463, 2652
MvnI CGCG 1 cut(s) 238
MwoI GCNNNNNNNGC 8 cut(s) 182, 235, 264, 273, 761, 2177, 2822, 3470
NaeI GCCGGC 1 cut(s) 1843
NciI CCSGG 2 cut(s) 120, 3548
NcoI CCATGG 1 cut(s) 3006
NdeI CATATG 1 cut(s) 682
NgoMIV GCCGGC 1 cut(s) 1841
NlaIV GGNNCC 5 cut(s) 259, 931, 1840, 2643, 2667
NmeAIII GCCGAG 1 cut(s) 1641
NmuCI GTSAC 4 cut(s) 415, 727, 1039, 2992
NsiI ATGCAT 1 cut(s) 766
NspI RCATGY 4 cut(s) 176, 1163, 1556, 3150
OliI CACNNNNGTG 2 cut(s) 819, 821
PaeI GCATGC 1 cut(s) 176
PagI TCATGA 3 cut(s) 1000, 2098, 2322
PceI AGGCCT 1 cut(s) 310
PciI ACATGT 1 cut(s) 1159
PciSI GCTCTTC 1 cut(s) 1287
PctI GAATGC 1 cut(s) 3213
PdiI GCCGGC 1 cut(s) 1843
PdmI GAANNNNTTC 3 cut(s) 1873, 2083, 3030
PfeI GAWTC 9 cut(s) 71, 115, 1139, 1546, 1781, 2132, 2458, 2876, 3128
PfoI TCCNGGA 1 cut(s) 118
PkrI GCNGC 9 cut(s) 1014, 1123, 1456, 2265, 3082, 3248, 3318, 3463, 3475
PleI GAGTC 6 cut(s) 453, 1387, 1822, 1925, 3092, 3100
PpsI GAGTC 6 cut(s) 453, 1387, 1822, 1925, 3092, 3100
PscI ACATGT 1 cut(s) 1159
PshAI GACNNNNGTC 1 cut(s) 2025
PshBI ATTAAT 2 cut(s) 1071, 3291
PsiI TTATAA 1 cut(s) 3416
Psp6I CCWGG 5 cut(s) 202, 925, 1719, 2461, 2650
PspEI GGTNACC 1 cut(s) 727
PspFI CCCAGC 2 cut(s) 1049, 1785
PspGI CCWGG 5 cut(s) 202, 925, 1719, 2461, 2650
PspN4I GGNNCC 5 cut(s) 259, 931, 1840, 2643, 2667
PspPI GGNCC 4 cut(s) 509, 1399, 1844, 3512
PstI CTGCAG 2 cut(s) 3222, 3318
PstNI CAGNNNCTG 3 cut(s) 209, 719, 1631
PsuI RGATCY 1 cut(s) 2654
PvuII CAGCTG 3 cut(s) 1457, 2980, 3476
RseI CAYNNNNRTG 3 cut(s) 819, 821, 952
SapI GCTCTTC 1 cut(s) 1287
SatI GCNGC 9 cut(s) 1013, 1122, 1455, 2264, 3081, 3247, 3317, 3462, 3474
Sau96I GGNCC 4 cut(s) 509, 1399, 1844, 3512
ScaI AGTACT 1 cut(s) 127
SchI GAGTC 6 cut(s) 454, 1387, 1823, 1925, 3092, 3101
ScrFI CCNGG 7 cut(s) 120, 204, 927, 1721, 2463, 2652, 3548
SduI GDGCHC 4 cut(s) 394, 1622, 2199, 2670
SexAI ACCWGGT 1 cut(s) 202
SfcI CTRYAG 2 cut(s) 3218, 3314
SinI GGWCC 2 cut(s) 509, 3512
SmiMI CAYNNNNRTG 3 cut(s) 819, 821, 952
SmlI CTYRAG 3 cut(s) 329, 1175, 3374
SmoI CTYRAG 3 cut(s) 329, 1175, 3374
SpeI ACTAGT 1 cut(s) 56
SphI GCATGC 1 cut(s) 176
SseBI AGGCCT 1 cut(s) 310
SsiI CCGC 7 cut(s) 212, 871, 1013, 1121, 1169, 1857, 3390
SspI AATATT 4 cut(s) 1069, 1285, 1951, 2752
StuI AGGCCT 1 cut(s) 310
StyD4I CCNGG 7 cut(s) 118, 202, 925, 1719, 2461, 2650, 3546
StyI CCWWGG 2 cut(s) 3006, 3156
TaaI ACNGT 5 cut(s) 421, 1057, 1406, 2010, 2534
TaiI ACGT 3 cut(s) 417, 2141, 2364
TaqI TCGA 2 cut(s) 1410, 2135
TatI WGTACW 6 cut(s) 125, 542, 1385, 1523, 2761, 3524
TauI GCSGC 2 cut(s) 1015, 1124
TfiI GAWTC 9 cut(s) 71, 115, 1139, 1546, 1781, 2132, 2458, 2876, 3128
TseFI GTSAC 4 cut(s) 415, 727, 1039, 2992
TseI GCWGC 7 cut(s) 1454, 2263, 3080, 3246, 3316, 3461, 3473
Tsp45I GTSAC 4 cut(s) 415, 727, 1039, 2992
TspGWI ACGGA 4 cut(s) 235, 1087, 3076, 3505
Vha464I CTTAAG 1 cut(s) 3374
VpaK11BI GGWCC 2 cut(s) 509, 3512
VspI ATTAAT 2 cut(s) 1071, 3291
XapI RAATTY 6 cut(s) 354, 960, 1319, 2318, 2375, 2777
XbaI TCTAGA 1 cut(s) 1490
XceI RCATGY 4 cut(s) 176, 1163, 1556, 3150
XmnI GAANNNNTTC 3 cut(s) 1873, 2083, 3030
ZraI GACGTC 1 cut(s) 2139
ZrmI AGTACT 1 cut(s) 127
Zsp2I ATGCAT 1 cut(s) 766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.