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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3749 |
| AatII | GACGTC | 1 cut(s) | 2453 |
| Acc36I | ACCTGC | 4 cut(s) | 2208, 2464, 2716, 3009 |
| AccB1I | GGYRCC | 2 cut(s) | 71, 2150 |
| AccII | CGCG | 3 cut(s) | 616, 728, 2119 |
| AciI | CCGC | 6 cut(s) | 90, 93, 269, 1183, 1481, 2117 |
| AclWI | GGATC | 7 cut(s) | 135, 141, 336, 952, 1536, 1671, 2995 |
| AcoI | YGGCCR | 2 cut(s) | 879, 1353 |
| AcuI | CTGAAG | 8 cut(s) | 38, 446, 1508, 1623, 1875, 2109, 2298, 2769 |
| AcyI | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| AflII | CTTAAG | 1 cut(s) | 3707 |
| AhlI | ACTAGT | 1 cut(s) | 434 |
| AjnI | CCWGG | 7 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 538, 570 |
| AleI | CACNNNNGTG | 3 cut(s) | 1131, 1133, 2504 |
| Alw21I | GWGCWC | 3 cut(s) | 706, 1934, 2511 |
| Alw26I | GTCTC | 4 cut(s) | 425, 1462, 1680, 3873 |
| Alw44I | GTGCAC | 1 cut(s) | 2507 |
| AlwI | GGATC | 7 cut(s) | 135, 141, 336, 952, 1536, 1671, 2995 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 587, 1031, 1943, 2276, 3767 |
| AoxI | GGCC | 7 cut(s) | 879, 1353, 1711, 2155, 2288, 2785, 3739 |
| ApaLI | GTGCAC | 1 cut(s) | 2507 |
| AseI | ATTAAT | 2 cut(s) | 1383, 3624 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2185, 2395, 3363 |
| AspLEI | GCGC | 3 cut(s) | 74, 616, 2623 |
| AspS9I | GGNCC | 5 cut(s) | 821, 1711, 2156, 3884, 3926 |
| AsuC2I | CCSGG | 1 cut(s) | 3963 |
| AsuHPI | GGTGA | 8 cut(s) | 549, 891, 1051, 1185, 1972, 2696, 3345, 3846 |
| AvaII | GGWCC | 3 cut(s) | 821, 3884, 3926 |
| AxyI | CCTNAGG | 1 cut(s) | 1032 |
| BaeGI | GKGCMC | 1 cut(s) | 2511 |
| BalI | TGGCCA | 2 cut(s) | 881, 1355 |
| BanI | GGYRCC | 2 cut(s) | 71, 2150 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 284, 316, 2742, 2774 |
| BbsI | GAAGAC | 5 cut(s) | 45, 888, 1850, 2286, 2333 |
| Bbv12I | GWGCWC | 3 cut(s) | 706, 1934, 2511 |
| BccI | CCATC | 9 cut(s) | 200, 512, 1180, 1198, 2063, 2690, 3266, 3731, 3766 |
| BceAI | ACGGC | 2 cut(s) | 85, 1071 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1712, 1746 |
| BciT130I | CCWGG | 7 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385 |
| BciVI | GTATCC | 3 cut(s) | 175, 293, 3382 |
| BclI | TGATCA | 2 cut(s) | 3406, 3523 |
| BcnI | CCSGG | 1 cut(s) | 3963 |
| BcoDI | GTCTC | 4 cut(s) | 425, 1462, 1680, 3873 |
| BcuI | ACTAGT | 1 cut(s) | 434 |
| BfaI | CTAG | 9 cut(s) | 435, 1425, 1740, 1803, 2250, 2754, 3330, 3717, 3881 |
| BfmI | CTRYAG | 3 cut(s) | 1431, 3551, 3647 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 3707 |
| BfuAI | ACCTGC | 4 cut(s) | 2208, 2464, 2716, 3009 |
| BfuI | GTATCC | 3 cut(s) | 175, 293, 3382 |
| BlpI | GCTNAGC | 2 cut(s) | 1928, 2721 |
| BmcAI | AGTACT | 1 cut(s) | 505 |
| Bme1390I | CCNGG | 8 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385, 3963 |
| Bme18I | GGWCC | 3 cut(s) | 821, 3884, 3926 |
| BmgT120I | GGNCC | 5 cut(s) | 821, 1711, 2156, 3884, 3926 |
| BmiI | GGNNCC | 4 cut(s) | 73, 1243, 2152, 2976 |
| BmrFI | CCNGG | 8 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385, 3963 |
| BmrI | ACTGGG | 2 cut(s) | 396, 2847 |
| BmuI | ACTGGG | 2 cut(s) | 396, 2847 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2337 |
| BpiI | GAAGAC | 5 cut(s) | 45, 888, 1850, 2286, 2333 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1028, 1060, 2987, 3019, 3416, 3448 |
| BpmI | CTGGAG | 2 cut(s) | 2976, 3831 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1928, 2721 |
| BpuMI | CCSGG | 1 cut(s) | 3963 |
| BsaBI | GATNNNNATC | 4 cut(s) | 9, 26, 145, 2382 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| BsaJI | CCNNGG | 5 cut(s) | 2774, 3339, 3384, 3489, 3961 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1924, 1954, 2010, 2040 |
| Bse118I | RCCGGY | 2 cut(s) | 922, 2153 |
| Bse21I | CCTNAGG | 1 cut(s) | 1032 |
| Bse3DI | GCAATG | 2 cut(s) | 539, 1443 |
| Bse8I | GATNNNNATC | 4 cut(s) | 9, 26, 145, 2382 |
| BseBI | CCWGG | 7 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385 |
| BseDI | CCNNGG | 5 cut(s) | 2774, 3339, 3384, 3489, 3961 |
| BseJI | GATNNNNATC | 4 cut(s) | 9, 26, 145, 2382 |
| BseMI | GCAATG | 2 cut(s) | 539, 1443 |
| BseMII | CTCAG | 6 cut(s) | 1023, 1193, 1919, 2582, 3018, 3039 |
| BseRI | GAGGAG | 5 cut(s) | 1049, 1654, 3011, 3861, 3864 |
| BseSI | GKGCMC | 1 cut(s) | 2511 |
| BseYI | CCCAGC | 2 cut(s) | 1361, 2097 |
| BsgI | GTGCAG | 1 cut(s) | 1785 |
| Bsh1236I | CGCG | 3 cut(s) | 616, 728, 2119 |
| BshFI | GGCC | 7 cut(s) | 881, 1355, 1713, 2157, 2290, 2787, 3741 |
| BshNI | GGYRCC | 2 cut(s) | 71, 2150 |
| BsiHKAI | GWGCWC | 3 cut(s) | 706, 1934, 2511 |
| BsiSI | CCGG | 4 cut(s) | 33, 923, 2154, 3963 |
| BslFI | GGGAC | 2 cut(s) | 1378, 2437 |
| BsmAI | GTCTC | 4 cut(s) | 425, 1462, 1680, 3873 |
| BsmFI | GGGAC | 2 cut(s) | 1378, 2437 |
| BsmI | GAATGC | 1 cut(s) | 3546 |
| BsnI | GGCC | 7 cut(s) | 881, 1355, 1713, 2157, 2290, 2787, 3741 |
| Bsp1286I | GDGCHC | 3 cut(s) | 706, 1934, 2511 |
| Bsp1407I | TGTACA | 2 cut(s) | 3844, 3938 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1928, 2721 |
| Bsp19I | CCATGG | 1 cut(s) | 3339 |
| BspACI | CCGC | 6 cut(s) | 90, 93, 269, 1183, 1481, 2117 |
| BspANI | GGCC | 7 cut(s) | 881, 1355, 1713, 2157, 2290, 2787, 3741 |
| BspCNI | CTCAG | 6 cut(s) | 1024, 1194, 1920, 2581, 3017, 3038 |
| BspFNI | CGCG | 3 cut(s) | 616, 728, 2119 |
| BspHI | TCATGA | 2 cut(s) | 1312, 2634 |
| BspLI | GGNNCC | 4 cut(s) | 73, 1243, 2152, 2976 |
| BspMAI | CTGCAG | 3 cut(s) | 1435, 3555, 3651 |
| BspMI | ACCTGC | 4 cut(s) | 2208, 2464, 2716, 3009 |
| BspPI | GGATC | 7 cut(s) | 135, 141, 336, 952, 1536, 1671, 2995 |
| BspQI | GCTCTTC | 1 cut(s) | 1599 |
| BspT107I | GGYRCC | 2 cut(s) | 71, 2150 |
| BspTI | CTTAAG | 1 cut(s) | 3707 |
| BsrDI | GCAATG | 2 cut(s) | 539, 1443 |
| BsrFI | RCCGGY | 2 cut(s) | 922, 2153 |
| BsrGI | TGTACA | 2 cut(s) | 3844, 3938 |
| BssAI | RCCGGY | 2 cut(s) | 922, 2153 |
| BssECI | CCNNGG | 5 cut(s) | 2774, 3339, 3384, 3489, 3961 |
| BssNI | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| BssT1I | CCWWGG | 2 cut(s) | 3339, 3489 |
| Bst2UI | CCWGG | 7 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385 |
| Bst4CI | ACNGT | 8 cut(s) | 401, 733, 1369, 1555, 1718, 2322, 2846, 3371 |
| Bst6I | CTCTTC | 7 cut(s) | 275, 423, 1125, 1599, 2386, 2655, 2811 |
| BstACI | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| BstAFI | CTTAAG | 1 cut(s) | 3707 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 604, 3155, 3599 |
| BstAUI | TGTACA | 2 cut(s) | 3844, 3938 |
| BstDSI | CCRYGG | 1 cut(s) | 3339 |
| BstEII | GGTNACC | 1 cut(s) | 1039 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3879 |
| BstFNI | CGCG | 3 cut(s) | 616, 728, 2119 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 3 cut(s) | 74, 616, 2623 |
| BstMAI | GTCTC | 4 cut(s) | 425, 1462, 1680, 3873 |
| BstNI | CCWGG | 7 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385 |
| BstNSI | RCATGY | 3 cut(s) | 554, 1868, 3483 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2337 |
| BstPI | GGTNACC | 1 cut(s) | 1039 |
| BstSCI | CCNGG | 8 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383, 3961 |
| BstSFI | CTRYAG | 3 cut(s) | 1431, 3551, 3647 |
| BstSLI | GKGCMC | 1 cut(s) | 2511 |
| BstUI | CGCG | 3 cut(s) | 616, 728, 2119 |
| BstV2I | GAAGAC | 5 cut(s) | 45, 888, 1850, 2286, 2333 |
| BstX2I | RGATCY | 3 cut(s) | 140, 146, 2987 |
| BstYI | RGATCY | 3 cut(s) | 140, 146, 2987 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1032 |
| BsuI | GTATCC | 3 cut(s) | 175, 293, 3382 |
| BsuRI | GGCC | 7 cut(s) | 881, 1355, 1713, 2157, 2290, 2787, 3741 |
| BtgI | CCRYGG | 1 cut(s) | 3339 |
| BtsI | GCAGTG | 2 cut(s) | 652, 3330 |
| BveI | ACCTGC | 4 cut(s) | 2208, 2464, 2716, 3009 |
| CaiI | CAGNNNCTG | 5 cut(s) | 587, 1031, 1943, 2276, 3767 |
| CciI | TCATGA | 2 cut(s) | 1312, 2634 |
| CfoI | GCGC | 3 cut(s) | 74, 616, 2623 |
| Cfr10I | RCCGGY | 2 cut(s) | 922, 2153 |
| Cfr13I | GGNCC | 5 cut(s) | 821, 1711, 2156, 3884, 3926 |
| CseI | GACGC | 1 cut(s) | 113 |
| CsiI | ACCWGGT | 1 cut(s) | 580 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 613, 648, 3817, 3852 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DraI | TTTAAA | 2 cut(s) | 2433, 2527 |
| EaeI | YGGCCR | 2 cut(s) | 879, 1353 |
| Eam1104I | CTCTTC | 7 cut(s) | 275, 423, 1125, 1599, 2386, 2655, 2811 |
| EarI | CTCTTC | 7 cut(s) | 275, 423, 1125, 1599, 2386, 2655, 2811 |
| EciI | GGCGGA | 1 cut(s) | 1496 |
| Eco130I | CCWWGG | 2 cut(s) | 3339, 3489 |
| Eco32I | GATATC | 1 cut(s) | 2854 |
| Eco47I | GGWCC | 3 cut(s) | 821, 3884, 3926 |
| Eco57I | CTGAAG | 8 cut(s) | 38, 446, 1508, 1623, 1875, 2109, 2298, 2769 |
| Eco81I | CCTNAGG | 1 cut(s) | 1032 |
| Eco91I | GGTNACC | 1 cut(s) | 1039 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3879 |
| EcoO65I | GGTNACC | 1 cut(s) | 1039 |
| EcoRI | GAATTC | 2 cut(s) | 1450, 3850 |
| EcoRII | CCWGG | 7 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383 |
| EcoRV | GATATC | 1 cut(s) | 2854 |
| EcoT14I | CCWWGG | 2 cut(s) | 3339, 3489 |
| EcoT22I | ATGCAT | 1 cut(s) | 1078 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 2 cut(s) | 3339, 3489 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 307, 339, 3726, 3758 |
| FaqI | GGGAC | 2 cut(s) | 1378, 2437 |
| FauI | CCCGC | 1 cut(s) | 276 |
| FauNDI | CATATG | 1 cut(s) | 994 |
| FbaI | TGATCA | 2 cut(s) | 3406, 3523 |
| FspBI | CTAG | 9 cut(s) | 435, 1425, 1740, 1803, 2250, 2754, 3330, 3717, 3881 |
| GlaI | GCGC | 3 cut(s) | 73, 615, 2622 |
| GsaI | CCCAGC | 2 cut(s) | 1365, 2101 |
| GsuI | CTGGAG | 2 cut(s) | 2976, 3831 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 7 cut(s) | 881, 1355, 1713, 2157, 2290, 2787, 3741 |
| HapII | CCGG | 4 cut(s) | 33, 923, 2154, 3963 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 3 cut(s) | 74, 616, 2623 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| Hin6I | GCGC | 3 cut(s) | 72, 614, 2621 |
| HinP1I | GCGC | 3 cut(s) | 72, 614, 2621 |
| HincII | GTYRAC | 1 cut(s) | 3301 |
| HindII | GTYRAC | 1 cut(s) | 3301 |
| HindIII | AAGCTT | 2 cut(s) | 1224, 2352 |
| HpaII | CCGG | 4 cut(s) | 33, 923, 2154, 3963 |
| HphI | GGTGA | 8 cut(s) | 549, 891, 1051, 1185, 1972, 2696, 3345, 3846 |
| Hpy99I | CGWCG | 4 cut(s) | 104, 107, 733, 2452 |
| HpyCH4III | ACNGT | 8 cut(s) | 401, 733, 1369, 1555, 1718, 2322, 2846, 3371 |
| HpyCH4IV | ACGT | 2 cut(s) | 2450, 2673 |
| HpySE526I | ACGT | 2 cut(s) | 2450, 2673 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 105, 2450 |
| HspAI | GCGC | 3 cut(s) | 72, 614, 2621 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| KroI | GCCGGC | 1 cut(s) | 2153 |
| KroNI | GCCGGC | 1 cut(s) | 2155 |
| Ksp22I | TGATCA | 2 cut(s) | 3406, 3523 |
| LguI | GCTCTTC | 1 cut(s) | 1599 |
| LmnI | GCTCC | 4 cut(s) | 1247, 1945, 3067, 3720 |
| MabI | ACCWGGT | 1 cut(s) | 580 |
| MaeI | CTAG | 9 cut(s) | 435, 1425, 1740, 1803, 2250, 2754, 3330, 3717, 3881 |
| MaeII | ACGT | 2 cut(s) | 2450, 2673 |
| MaeIII | GTNAC | 3 cut(s) | 925, 1039, 3325 |
| MfeI | CAATTG | 4 cut(s) | 1955, 2160, 2502, 3798 |
| MflI | RGATCY | 3 cut(s) | 140, 146, 2987 |
| MhlI | GDGCHC | 3 cut(s) | 706, 1934, 2511 |
| MlsI | TGGCCA | 2 cut(s) | 881, 1355 |
| MluNI | TGGCCA | 2 cut(s) | 881, 1355 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 7 cut(s) | 38, 766, 2135, 2237, 3008, 3425, 3434 |
| MmeI | TCCRAC | 2 cut(s) | 154, 887 |
| Mox20I | TGGCCA | 2 cut(s) | 881, 1355 |
| Mph1103I | ATGCAT | 1 cut(s) | 1078 |
| MroNI | GCCGGC | 1 cut(s) | 2153 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2185, 2395, 3363 |
| MscI | TGGCCA | 2 cut(s) | 881, 1355 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1131, 1133, 1264, 2504 |
| Msp20I | TGGCCA | 2 cut(s) | 881, 1355 |
| MspA1I | CMGCKG | 2 cut(s) | 1769, 3809 |
| MspCI | CTTAAG | 1 cut(s) | 3707 |
| MspI | CCGG | 4 cut(s) | 33, 923, 2154, 3963 |
| MspR9I | CCNGG | 8 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385, 3963 |
| MunI | CAATTG | 4 cut(s) | 1955, 2160, 2502, 3798 |
| Mva1269I | GAATGC | 1 cut(s) | 3546 |
| MvaI | CCWGG | 7 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385 |
| MvnI | CGCG | 3 cut(s) | 616, 728, 2119 |
| NaeI | GCCGGC | 1 cut(s) | 2155 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NciI | CCSGG | 1 cut(s) | 3963 |
| NcoI | CCATGG | 1 cut(s) | 3339 |
| NdeI | CATATG | 1 cut(s) | 994 |
| NgoMIV | GCCGGC | 1 cut(s) | 2153 |
| NlaIV | GGNNCC | 4 cut(s) | 73, 1243, 2152, 2976 |
| NmuCI | GTSAC | 2 cut(s) | 1039, 3325 |
| NsiI | ATGCAT | 1 cut(s) | 1078 |
| NspI | RCATGY | 3 cut(s) | 554, 1868, 3483 |
| OliI | CACNNNNGTG | 3 cut(s) | 1131, 1133, 2504 |
| PaeI | GCATGC | 1 cut(s) | 554 |
| PagI | TCATGA | 2 cut(s) | 1312, 2634 |
| PciSI | GCTCTTC | 1 cut(s) | 1599 |
| PctI | GAATGC | 1 cut(s) | 3546 |
| PdiI | GCCGGC | 1 cut(s) | 2155 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2185, 2395, 3363 |
| PfeI | GAWTC | 9 cut(s) | 5, 449, 493, 1705, 1858, 2093, 2444, 2770, 3461 |
| PfoI | TCCNGGA | 1 cut(s) | 496 |
| PleI | GAGTC | 7 cut(s) | 38, 765, 2134, 2237, 3007, 3425, 3433 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 7 cut(s) | 38, 765, 2134, 2237, 3007, 3425, 3433 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2337 |
| PshBI | ATTAAT | 2 cut(s) | 1383, 3624 |
| PsiI | TTATAA | 1 cut(s) | 3749 |
| Psp6I | CCWGG | 7 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383 |
| PspEI | GGTNACC | 1 cut(s) | 1039 |
| PspFI | CCCAGC | 2 cut(s) | 1361, 2097 |
| PspGI | CCWGG | 7 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383 |
| PspN4I | GGNNCC | 4 cut(s) | 73, 1243, 2152, 2976 |
| PspPI | GGNCC | 5 cut(s) | 821, 1711, 2156, 3884, 3926 |
| PstI | CTGCAG | 3 cut(s) | 1435, 3555, 3651 |
| PstNI | CAGNNNCTG | 5 cut(s) | 587, 1031, 1943, 2276, 3767 |
| PsuI | RGATCY | 3 cut(s) | 140, 146, 2987 |
| PvuII | CAGCTG | 2 cut(s) | 1769, 3809 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1131, 1133, 1264, 2504 |
| SapI | GCTCTTC | 1 cut(s) | 1599 |
| Sau96I | GGNCC | 5 cut(s) | 821, 1711, 2156, 3884, 3926 |
| ScaI | AGTACT | 1 cut(s) | 505 |
| SchI | GAGTC | 7 cut(s) | 38, 766, 2135, 2237, 3008, 3425, 3434 |
| ScrFI | CCNGG | 8 cut(s) | 498, 582, 1239, 2033, 2775, 2985, 3385, 3963 |
| SduI | GDGCHC | 3 cut(s) | 706, 1934, 2511 |
| SexAI | ACCWGGT | 1 cut(s) | 580 |
| SfcI | CTRYAG | 3 cut(s) | 1431, 3551, 3647 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SinI | GGWCC | 3 cut(s) | 821, 3884, 3926 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1131, 1133, 1264, 2504 |
| SmlI | CTYRAG | 1 cut(s) | 3707 |
| SmoI | CTYRAG | 1 cut(s) | 3707 |
| SpeI | ACTAGT | 1 cut(s) | 434 |
| SphI | GCATGC | 1 cut(s) | 554 |
| SsiI | CCGC | 6 cut(s) | 90, 93, 269, 1183, 1481, 2117 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspI | AATATT | 4 cut(s) | 1381, 1597, 2263, 3085 |
| SspMI | CTAG | 9 cut(s) | 435, 1425, 1740, 1803, 2250, 2754, 3330, 3717, 3881 |
| StyD4I | CCNGG | 8 cut(s) | 496, 580, 1237, 2031, 2773, 2983, 3383, 3961 |
| StyI | CCWWGG | 2 cut(s) | 3339, 3489 |
| TaaI | ACNGT | 8 cut(s) | 401, 733, 1369, 1555, 1718, 2322, 2846, 3371 |
| TaiI | ACGT | 2 cut(s) | 2453, 2676 |
| TaqI | TCGA | 4 cut(s) | 24, 331, 1722, 2447 |
| TatI | WGTACW | 7 cut(s) | 503, 854, 1697, 1835, 3094, 3844, 3938 |
| TauI | GCSGC | 1 cut(s) | 95 |
| TfiI | GAWTC | 9 cut(s) | 5, 449, 493, 1705, 1858, 2093, 2444, 2770, 3461 |
| TseFI | GTSAC | 2 cut(s) | 1039, 3325 |
| Tsp45I | GTSAC | 2 cut(s) | 1039, 3325 |
| TspGWI | ACGGA | 2 cut(s) | 769, 3919 |
| Vha464I | CTTAAG | 1 cut(s) | 3707 |
| VneI | GTGCAC | 1 cut(s) | 2507 |
| VpaK11BI | GGWCC | 3 cut(s) | 821, 3884, 3926 |
| VspI | ATTAAT | 2 cut(s) | 1383, 3624 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3879 |
| XbaI | TCTAGA | 1 cut(s) | 1802 |
| XceI | RCATGY | 3 cut(s) | 554, 1868, 3483 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 874 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2185, 2395, 3363 |
| XspI | CTAG | 9 cut(s) | 435, 1425, 1740, 1803, 2250, 2754, 3330, 3717, 3881 |
| ZraI | GACGTC | 1 cut(s) | 2451 |
| ZrmI | AGTACT | 1 cut(s) | 505 |
| Zsp2I | ATGCAT | 1 cut(s) | 1078 |