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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3737 |
| AatII | GACGTC | 1 cut(s) | 2441 |
| Acc36I | ACCTGC | 4 cut(s) | 2196, 2452, 2704, 2997 |
| AccB1I | GGYRCC | 3 cut(s) | 71, 104, 2138 |
| AccBSI | CCGCTC | 1 cut(s) | 3711 |
| AccI | GTMKAC | 1 cut(s) | 59 |
| AccII | CGCG | 2 cut(s) | 610, 2107 |
| AclWI | GGATC | 7 cut(s) | 135, 330, 946, 1524, 1659, 2983, 3118 |
| AcoI | YGGCCR | 1 cut(s) | 873 |
| AcuI | CTGAAG | 6 cut(s) | 38, 440, 1611, 1863, 2097, 2286 |
| AcyI | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| AdeI | CACNNNGTG | 1 cut(s) | 3527 |
| AflII | CTTAAG | 1 cut(s) | 3695 |
| AflIII | ACRYGT | 1 cut(s) | 1459 |
| AgeI | ACCGGT | 1 cut(s) | 916 |
| AhlI | ACTAGT | 1 cut(s) | 428 |
| AjnI | CCWGG | 6 cut(s) | 574, 1225, 2019, 2761, 2971, 3371 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 532, 564 |
| AleI | CACNNNNGTG | 3 cut(s) | 1080, 1119, 1121 |
| Alw21I | GWGCWC | 4 cut(s) | 700, 1922, 2499, 3247 |
| Alw26I | GTCTC | 4 cut(s) | 419, 1450, 1668, 3861 |
| AlwI | GGATC | 7 cut(s) | 135, 330, 946, 1524, 1659, 2983, 3118 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1931, 3755 |
| AoxI | GGCC | 6 cut(s) | 873, 1310, 1699, 2276, 2773, 3727 |
| ApeKI | GCWGC | 9 cut(s) | 265, 1754, 2563, 3311, 3401, 3567, 3637, 3782, 3794 |
| AseI | ATTAAT | 2 cut(s) | 1371, 3612 |
| AsiGI | ACCGGT | 1 cut(s) | 916 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 476, 2173, 2383, 3351 |
| AspLEI | GCGC | 4 cut(s) | 74, 107, 610, 2611 |
| AspS9I | GGNCC | 5 cut(s) | 815, 1310, 1699, 3872, 3914 |
| AsuC2I | CCSGG | 3 cut(s) | 492, 3108, 3951 |
| AvaII | GGWCC | 3 cut(s) | 815, 3872, 3914 |
| AxyI | CCTNAGG | 1 cut(s) | 1026 |
| BalI | TGGCCA | 1 cut(s) | 875 |
| BanI | GGYRCC | 3 cut(s) | 71, 104, 2138 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 278, 310, 2730, 2762 |
| BbsI | GAAGAC | 5 cut(s) | 45, 882, 1838, 2274, 2321 |
| Bbv12I | GWGCWC | 4 cut(s) | 700, 1922, 2499, 3247 |
| BbvI | GCAGC | 9 cut(s) | 277, 1766, 2575, 3323, 3388, 3579, 3649, 3769, 3806 |
| BccI | CCATC | 5 cut(s) | 506, 1168, 1186, 3719, 3754 |
| BceAI | ACGGC | 4 cut(s) | 59, 85, 118, 1065 |
| BciT130I | CCWGG | 6 cut(s) | 576, 1227, 2021, 2763, 2973, 3373 |
| BciVI | GTATCC | 3 cut(s) | 169, 287, 3370 |
| BclI | TGATCA | 2 cut(s) | 3394, 3511 |
| BcnI | CCSGG | 3 cut(s) | 492, 3108, 3951 |
| BcoDI | GTCTC | 4 cut(s) | 419, 1450, 1668, 3861 |
| BcuI | ACTAGT | 1 cut(s) | 428 |
| BfmI | CTRYAG | 2 cut(s) | 3539, 3635 |
| BfoI | RGCGCY | 2 cut(s) | 75, 108 |
| BfrI | CTTAAG | 1 cut(s) | 3695 |
| BfuAI | ACCTGC | 4 cut(s) | 2196, 2452, 2704, 2997 |
| BfuI | GTATCC | 3 cut(s) | 169, 287, 3370 |
| BlpI | GCTNAGC | 2 cut(s) | 1916, 2709 |
| Bme1390I | CCNGG | 9 cut(s) | 492, 576, 1227, 2021, 2763, 2973, 3108, 3373, 3951 |
| Bme18I | GGWCC | 3 cut(s) | 815, 3872, 3914 |
| BmgT120I | GGNCC | 5 cut(s) | 815, 1310, 1699, 3872, 3914 |
| BmiI | GGNNCC | 6 cut(s) | 73, 106, 1231, 1311, 2140, 2964 |
| BmrFI | CCNGG | 9 cut(s) | 492, 576, 1227, 2021, 2763, 2973, 3108, 3373, 3951 |
| BmrI | ACTGGG | 1 cut(s) | 2835 |
| BmuI | ACTGGG | 1 cut(s) | 2835 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2325 |
| BpiI | GAAGAC | 5 cut(s) | 45, 882, 1838, 2274, 2321 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1022, 1054, 2975, 3007, 3404, 3436 |
| BpmI | CTGGAG | 2 cut(s) | 2964, 3819 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1916, 2709 |
| BpuEI | CTTGAG | 1 cut(s) | 1460 |
| BpuMI | CCSGG | 3 cut(s) | 492, 3108, 3951 |
| BsaBI | GATNNNNATC | 3 cut(s) | 9, 26, 2370 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| BsaJI | CCNNGG | 5 cut(s) | 2762, 3327, 3372, 3477, 3949 |
| BsaWI | WCCGGW | 1 cut(s) | 916 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1912, 1942, 1998, 2028 |
| Bse118I | RCCGGY | 2 cut(s) | 916, 3883 |
| Bse21I | CCTNAGG | 1 cut(s) | 1026 |
| Bse3DI | GCAATG | 2 cut(s) | 533, 1431 |
| Bse8I | GATNNNNATC | 3 cut(s) | 9, 26, 2370 |
| BseBI | CCWGG | 6 cut(s) | 576, 1227, 2021, 2763, 2973, 3373 |
| BseDI | CCNNGG | 5 cut(s) | 2762, 3327, 3372, 3477, 3949 |
| BseJI | GATNNNNATC | 3 cut(s) | 9, 26, 2370 |
| BseMI | GCAATG | 2 cut(s) | 533, 1431 |
| BseMII | CTCAG | 6 cut(s) | 1017, 1181, 1907, 2570, 3006, 3027 |
| BseRI | GAGGAG | 3 cut(s) | 1043, 1642, 2999 |
| BseXI | GCAGC | 9 cut(s) | 277, 1766, 2575, 3323, 3388, 3579, 3649, 3769, 3806 |
| BseYI | CCCAGC | 2 cut(s) | 1349, 2085 |
| BsgI | GTGCAG | 1 cut(s) | 1773 |
| Bsh1236I | CGCG | 2 cut(s) | 610, 2107 |
| BshFI | GGCC | 6 cut(s) | 875, 1312, 1701, 2278, 2775, 3729 |
| BshNI | GGYRCC | 3 cut(s) | 71, 104, 2138 |
| BshTI | ACCGGT | 1 cut(s) | 916 |
| BsiHKAI | GWGCWC | 4 cut(s) | 700, 1922, 2499, 3247 |
| BsiSI | CCGG | 6 cut(s) | 33, 491, 917, 3108, 3884, 3951 |
| BslFI | GGGAC | 2 cut(s) | 1366, 2425 |
| BsmAI | GTCTC | 4 cut(s) | 419, 1450, 1668, 3861 |
| BsmFI | GGGAC | 2 cut(s) | 1366, 2425 |
| BsmI | GAATGC | 1 cut(s) | 3534 |
| BsnI | GGCC | 6 cut(s) | 875, 1312, 1701, 2278, 2775, 3729 |
| Bsp1286I | GDGCHC | 4 cut(s) | 700, 1922, 2499, 3247 |
| Bsp1407I | TGTACA | 2 cut(s) | 3832, 3926 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1916, 2709 |
| Bsp19I | CCATGG | 1 cut(s) | 3327 |
| BspANI | GGCC | 6 cut(s) | 875, 1312, 1701, 2278, 2775, 3729 |
| BspCNI | CTCAG | 6 cut(s) | 1018, 1182, 1908, 2569, 3005, 3026 |
| BspFNI | CGCG | 2 cut(s) | 610, 2107 |
| BspHI | TCATGA | 3 cut(s) | 1300, 2398, 2622 |
| BspLI | GGNNCC | 6 cut(s) | 73, 106, 1231, 1311, 2140, 2964 |
| BspMAI | CTGCAG | 2 cut(s) | 3543, 3639 |
| BspMI | ACCTGC | 4 cut(s) | 2196, 2452, 2704, 2997 |
| BspPI | GGATC | 7 cut(s) | 135, 330, 946, 1524, 1659, 2983, 3118 |
| BspQI | GCTCTTC | 1 cut(s) | 1587 |
| BspT107I | GGYRCC | 3 cut(s) | 71, 104, 2138 |
| BspTI | CTTAAG | 1 cut(s) | 3695 |
| BsrBI | CCGCTC | 1 cut(s) | 3711 |
| BsrDI | GCAATG | 2 cut(s) | 533, 1431 |
| BsrFI | RCCGGY | 2 cut(s) | 916, 3883 |
| BsrGI | TGTACA | 2 cut(s) | 3832, 3926 |
| BssAI | RCCGGY | 2 cut(s) | 916, 3883 |
| BssECI | CCNNGG | 5 cut(s) | 2762, 3327, 3372, 3477, 3949 |
| BssNI | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| BssT1I | CCWWGG | 2 cut(s) | 3327, 3477 |
| Bst2UI | CCWGG | 6 cut(s) | 576, 1227, 2021, 2763, 2973, 3373 |
| Bst4CI | ACNGT | 6 cut(s) | 727, 1357, 1706, 2310, 2834, 3359 |
| Bst6I | CTCTTC | 7 cut(s) | 269, 417, 462, 1587, 2374, 2643, 2799 |
| BstACI | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| BstAFI | CTTAAG | 1 cut(s) | 3695 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3143, 3587 |
| BstAUI | TGTACA | 2 cut(s) | 3832, 3926 |
| BstC8I | GCNNGC | 8 cut(s) | 122, 546, 586, 1467, 1875, 2143, 2340, 3135 |
| BstDSI | CCRYGG | 1 cut(s) | 3327 |
| BstEII | GGTNACC | 1 cut(s) | 1033 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3867 |
| BstFNI | CGCG | 2 cut(s) | 610, 2107 |
| BstH2I | RGCGCY | 2 cut(s) | 75, 108 |
| BstHHI | GCGC | 4 cut(s) | 74, 107, 610, 2611 |
| BstMAI | GTCTC | 4 cut(s) | 419, 1450, 1668, 3861 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2477, 3143, 3587, 3791 |
| BstNI | CCWGG | 6 cut(s) | 576, 1227, 2021, 2763, 2973, 3373 |
| BstNSI | RCATGY | 4 cut(s) | 548, 1463, 1856, 3471 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2325 |
| BstPI | GGTNACC | 1 cut(s) | 1033 |
| BstSCI | CCNGG | 9 cut(s) | 490, 574, 1225, 2019, 2761, 2971, 3106, 3371, 3949 |
| BstSFI | CTRYAG | 2 cut(s) | 3539, 3635 |
| BstUI | CGCG | 2 cut(s) | 610, 2107 |
| BstV1I | GCAGC | 9 cut(s) | 277, 1766, 2575, 3323, 3388, 3579, 3649, 3769, 3806 |
| BstV2I | GAAGAC | 5 cut(s) | 45, 882, 1838, 2274, 2321 |
| BstX2I | RGATCY | 2 cut(s) | 140, 2975 |
| BstYI | RGATCY | 2 cut(s) | 140, 2975 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1026 |
| BsuI | GTATCC | 3 cut(s) | 169, 287, 3370 |
| BsuRI | GGCC | 6 cut(s) | 875, 1312, 1701, 2278, 2775, 3729 |
| BtgI | CCRYGG | 1 cut(s) | 3327 |
| BtsI | GCAGTG | 3 cut(s) | 391, 646, 1075 |
| BveI | ACCTGC | 4 cut(s) | 2196, 2452, 2704, 2997 |
| Cac8I | GCNNGC | 8 cut(s) | 122, 546, 586, 1467, 1875, 2143, 2340, 3135 |
| CaiI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1931, 3755 |
| CciI | TCATGA | 3 cut(s) | 1300, 2398, 2622 |
| CfoI | GCGC | 4 cut(s) | 74, 107, 610, 2611 |
| Cfr10I | RCCGGY | 2 cut(s) | 916, 3883 |
| Cfr13I | GGNCC | 5 cut(s) | 815, 1310, 1699, 3872, 3914 |
| CsiI | ACCWGGT | 1 cut(s) | 574 |
| CspAI | ACCGGT | 1 cut(s) | 916 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 607, 642, 3805, 3840 |
| DinI | GGCGCC | 2 cut(s) | 73, 106 |
| DraI | TTTAAA | 2 cut(s) | 2421, 2515 |
| DraIII | CACNNNGTG | 1 cut(s) | 3527 |
| EaeI | YGGCCR | 1 cut(s) | 873 |
| Eam1104I | CTCTTC | 7 cut(s) | 269, 417, 462, 1587, 2374, 2643, 2799 |
| EarI | CTCTTC | 7 cut(s) | 269, 417, 462, 1587, 2374, 2643, 2799 |
| EciI | GGCGGA | 1 cut(s) | 1484 |
| Eco130I | CCWWGG | 2 cut(s) | 3327, 3477 |
| Eco32I | GATATC | 1 cut(s) | 2842 |
| Eco47I | GGWCC | 3 cut(s) | 815, 3872, 3914 |
| Eco57I | CTGAAG | 6 cut(s) | 38, 440, 1611, 1863, 2097, 2286 |
| Eco81I | CCTNAGG | 1 cut(s) | 1026 |
| Eco91I | GGTNACC | 1 cut(s) | 1033 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3867 |
| EcoO65I | GGTNACC | 1 cut(s) | 1033 |
| EcoRI | GAATTC | 2 cut(s) | 355, 3838 |
| EcoRII | CCWGG | 6 cut(s) | 574, 1225, 2019, 2761, 2971, 3371 |
| EcoRV | GATATC | 1 cut(s) | 2842 |
| EcoT14I | CCWWGG | 2 cut(s) | 3327, 3477 |
| EcoT22I | ATGCAT | 1 cut(s) | 1072 |
| EgeI | GGCGCC | 2 cut(s) | 73, 106 |
| EheI | GGCGCC | 2 cut(s) | 73, 106 |
| ErhI | CCWWGG | 2 cut(s) | 3327, 3477 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 301, 333, 3714, 3746 |
| FaqI | GGGAC | 2 cut(s) | 1366, 2425 |
| FauI | CCCGC | 4 cut(s) | 270, 577, 1458, 2164 |
| FauNDI | CATATG | 1 cut(s) | 988 |
| FbaI | TGATCA | 2 cut(s) | 3394, 3511 |
| FblI | GTMKAC | 1 cut(s) | 59 |
| GlaI | GCGC | 4 cut(s) | 73, 106, 609, 2610 |
| GsaI | CCCAGC | 2 cut(s) | 1353, 2089 |
| GsuI | CTGGAG | 2 cut(s) | 2964, 3819 |
| HaeII | RGCGCY | 2 cut(s) | 75, 108 |
| HaeIII | GGCC | 6 cut(s) | 875, 1312, 1701, 2278, 2775, 3729 |
| HapII | CCGG | 6 cut(s) | 33, 491, 917, 3108, 3884, 3951 |
| HhaI | GCGC | 4 cut(s) | 74, 107, 610, 2611 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| Hin6I | GCGC | 4 cut(s) | 72, 105, 608, 2609 |
| HinP1I | GCGC | 4 cut(s) | 72, 105, 608, 2609 |
| HincII | GTYRAC | 2 cut(s) | 60, 3289 |
| HindII | GTYRAC | 2 cut(s) | 60, 3289 |
| HindIII | AAGCTT | 2 cut(s) | 1212, 2340 |
| HpaII | CCGG | 6 cut(s) | 33, 491, 917, 3108, 3884, 3951 |
| Hpy99I | CGWCG | 2 cut(s) | 104, 2440 |
| HpyCH4III | ACNGT | 6 cut(s) | 727, 1357, 1706, 2310, 2834, 3359 |
| HpyCH4IV | ACGT | 3 cut(s) | 720, 2438, 2661 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2477, 3143, 3587, 3791 |
| HpySE526I | ACGT | 3 cut(s) | 720, 2438, 2661 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 105, 2438 |
| HspAI | GCGC | 4 cut(s) | 72, 105, 608, 2609 |
| KasI | GGCGCC | 2 cut(s) | 71, 104 |
| Ksp22I | TGATCA | 2 cut(s) | 3394, 3511 |
| LguI | GCTCTTC | 1 cut(s) | 1587 |
| LmnI | GCTCC | 4 cut(s) | 1235, 1933, 3242, 3708 |
| Lsp1109I | GCAGC | 9 cut(s) | 277, 1766, 2575, 3323, 3388, 3579, 3649, 3769, 3806 |
| MabI | ACCWGGT | 1 cut(s) | 574 |
| MaeII | ACGT | 3 cut(s) | 720, 2438, 2661 |
| MaeIII | GTNAC | 4 cut(s) | 721, 919, 1033, 1339 |
| MbiI | CCGCTC | 1 cut(s) | 3711 |
| MfeI | CAATTG | 3 cut(s) | 1943, 2490, 3786 |
| MflI | RGATCY | 2 cut(s) | 140, 2975 |
| MhlI | GDGCHC | 4 cut(s) | 700, 1922, 2499, 3247 |
| MlsI | TGGCCA | 1 cut(s) | 875 |
| MluNI | TGGCCA | 1 cut(s) | 875 |
| Mly113I | GGCGCC | 2 cut(s) | 72, 105 |
| MlyI | GAGTC | 8 cut(s) | 38, 55, 760, 2123, 2225, 2996, 3413, 3422 |
| MmeI | TCCRAC | 2 cut(s) | 154, 881 |
| Mox20I | TGGCCA | 1 cut(s) | 875 |
| Mph1103I | ATGCAT | 1 cut(s) | 1072 |
| MroXI | GAANNNNTTC | 4 cut(s) | 476, 2173, 2383, 3351 |
| MscI | TGGCCA | 1 cut(s) | 875 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1080, 1119, 1121, 1252 |
| Msp20I | TGGCCA | 1 cut(s) | 875 |
| MspA1I | CMGCKG | 2 cut(s) | 1757, 3797 |
| MspCI | CTTAAG | 1 cut(s) | 3695 |
| MspI | CCGG | 6 cut(s) | 33, 491, 917, 3108, 3884, 3951 |
| MspR9I | CCNGG | 9 cut(s) | 492, 576, 1227, 2021, 2763, 2973, 3108, 3373, 3951 |
| MunI | CAATTG | 3 cut(s) | 1943, 2490, 3786 |
| Mva1269I | GAATGC | 1 cut(s) | 3534 |
| MvaI | CCWGG | 6 cut(s) | 576, 1227, 2021, 2763, 2973, 3373 |
| MvnI | CGCG | 2 cut(s) | 610, 2107 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2477, 3143, 3587, 3791 |
| NarI | GGCGCC | 2 cut(s) | 72, 105 |
| NciI | CCSGG | 3 cut(s) | 492, 3108, 3951 |
| NcoI | CCATGG | 1 cut(s) | 3327 |
| NdeI | CATATG | 1 cut(s) | 988 |
| NlaIV | GGNNCC | 6 cut(s) | 73, 106, 1231, 1311, 2140, 2964 |
| NmuCI | GTSAC | 3 cut(s) | 721, 1033, 1339 |
| NsiI | ATGCAT | 1 cut(s) | 1072 |
| NspI | RCATGY | 4 cut(s) | 548, 1463, 1856, 3471 |
| OliI | CACNNNNGTG | 3 cut(s) | 1080, 1119, 1121 |
| PaeI | GCATGC | 1 cut(s) | 548 |
| PagI | TCATGA | 3 cut(s) | 1300, 2398, 2622 |
| PciI | ACATGT | 1 cut(s) | 1459 |
| PciSI | GCTCTTC | 1 cut(s) | 1587 |
| PctI | GAATGC | 1 cut(s) | 3534 |
| PdmI | GAANNNNTTC | 4 cut(s) | 476, 2173, 2383, 3351 |
| PfeI | GAWTC | 9 cut(s) | 5, 443, 487, 1693, 1846, 2081, 2432, 2758, 3449 |
| PfoI | TCCNGGA | 1 cut(s) | 490 |
| PinAI | ACCGGT | 1 cut(s) | 916 |
| PleI | GAGTC | 8 cut(s) | 38, 55, 759, 2122, 2225, 2995, 3413, 3421 |
| PluTI | GGCGCC | 2 cut(s) | 75, 108 |
| PpsI | GAGTC | 8 cut(s) | 38, 55, 759, 2122, 2225, 2995, 3413, 3421 |
| PscI | ACATGT | 1 cut(s) | 1459 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2325 |
| PshBI | ATTAAT | 2 cut(s) | 1371, 3612 |
| PsiI | TTATAA | 1 cut(s) | 3737 |
| Psp6I | CCWGG | 6 cut(s) | 574, 1225, 2019, 2761, 2971, 3371 |
| PspEI | GGTNACC | 1 cut(s) | 1033 |
| PspFI | CCCAGC | 2 cut(s) | 1349, 2085 |
| PspGI | CCWGG | 6 cut(s) | 574, 1225, 2019, 2761, 2971, 3371 |
| PspN4I | GGNNCC | 6 cut(s) | 73, 106, 1231, 1311, 2140, 2964 |
| PspPI | GGNCC | 5 cut(s) | 815, 1310, 1699, 3872, 3914 |
| PstI | CTGCAG | 2 cut(s) | 3543, 3639 |
| PstNI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1931, 3755 |
| PsuI | RGATCY | 2 cut(s) | 140, 2975 |
| PvuII | CAGCTG | 2 cut(s) | 1757, 3797 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1080, 1119, 1121, 1252 |
| SalI | GTCGAC | 1 cut(s) | 58 |
| SapI | GCTCTTC | 1 cut(s) | 1587 |
| Sau96I | GGNCC | 5 cut(s) | 815, 1310, 1699, 3872, 3914 |
| SchI | GAGTC | 8 cut(s) | 38, 55, 760, 2123, 2225, 2996, 3413, 3422 |
| ScrFI | CCNGG | 9 cut(s) | 492, 576, 1227, 2021, 2763, 2973, 3108, 3373, 3951 |
| SduI | GDGCHC | 4 cut(s) | 700, 1922, 2499, 3247 |
| SexAI | ACCWGGT | 1 cut(s) | 574 |
| SfcI | CTRYAG | 2 cut(s) | 3539, 3635 |
| SfoI | GGCGCC | 2 cut(s) | 73, 106 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3883 |
| SinI | GGWCC | 3 cut(s) | 815, 3872, 3914 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1080, 1119, 1121, 1252 |
| SmlI | CTYRAG | 2 cut(s) | 1475, 3695 |
| SmoI | CTYRAG | 2 cut(s) | 1475, 3695 |
| SpeI | ACTAGT | 1 cut(s) | 428 |
| SphI | GCATGC | 1 cut(s) | 548 |
| SspDI | GGCGCC | 2 cut(s) | 71, 104 |
| SspI | AATATT | 3 cut(s) | 1369, 1585, 2251 |
| StyD4I | CCNGG | 9 cut(s) | 490, 574, 1225, 2019, 2761, 2971, 3106, 3371, 3949 |
| StyI | CCWWGG | 2 cut(s) | 3327, 3477 |
| TaaI | ACNGT | 6 cut(s) | 727, 1357, 1706, 2310, 2834, 3359 |
| TaiI | ACGT | 3 cut(s) | 723, 2441, 2664 |
| TaqI | TCGA | 5 cut(s) | 24, 59, 80, 325, 2435 |
| TatI | WGTACW | 7 cut(s) | 497, 848, 1685, 1823, 3082, 3832, 3926 |
| TauI | GCSGC | 2 cut(s) | 1315, 1424 |
| TfiI | GAWTC | 9 cut(s) | 5, 443, 487, 1693, 1846, 2081, 2432, 2758, 3449 |
| TseFI | GTSAC | 3 cut(s) | 721, 1033, 1339 |
| TseI | GCWGC | 9 cut(s) | 265, 1754, 2563, 3311, 3401, 3567, 3637, 3782, 3794 |
| Tsp45I | GTSAC | 3 cut(s) | 721, 1033, 1339 |
| TspGWI | ACGGA | 4 cut(s) | 607, 1387, 3276, 3907 |
| Vha464I | CTTAAG | 1 cut(s) | 3695 |
| VpaK11BI | GGWCC | 3 cut(s) | 815, 3872, 3914 |
| VspI | ATTAAT | 2 cut(s) | 1371, 3612 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3867 |
| XbaI | TCTAGA | 1 cut(s) | 1790 |
| XceI | RCATGY | 4 cut(s) | 548, 1463, 1856, 3471 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 868 |
| XmiI | GTMKAC | 1 cut(s) | 59 |
| XmnI | GAANNNNTTC | 4 cut(s) | 476, 2173, 2383, 3351 |
| ZraI | GACGTC | 1 cut(s) | 2439 |
| Zsp2I | ATGCAT | 1 cut(s) | 1072 |