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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1619 |
| AciI | CCGC | 4 cut(s) | 757, 836, 902, 1638 |
| AclWI | GGATC | 4 cut(s) | 123, 526, 1005, 1140 |
| AcoI | YGGCCR | 3 cut(s) | 453, 571, 716 |
| AcsI | RAATTY | 3 cut(s) | 44, 852, 1100 |
| AcuI | CTGAAG | 5 cut(s) | 233, 977, 1092, 1344, 1578 |
| AfaI | GTAC | 4 cut(s) | 232, 292, 430, 1168 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 112, 704, 845, 1028 |
| AflIII | ACRYGT | 1 cut(s) | 940 |
| AhlI | ACTAGT | 1 cut(s) | 221 |
| AjnI | CCWGG | 3 cut(s) | 283, 367, 1500 |
| AleI | CACNNNNGTG | 2 cut(s) | 705, 707 |
| AluBI | AGCT | 6 cut(s) | 122, 350, 1078, 1238, 1396, 1409 |
| AluI | AGCT | 6 cut(s) | 122, 350, 1078, 1238, 1396, 1409 |
| Alw21I | GWGCWC | 1 cut(s) | 1403 |
| Alw26I | GTCTC | 3 cut(s) | 212, 931, 1149 |
| AlwI | GGATC | 4 cut(s) | 123, 526, 1005, 1140 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 605, 1412 |
| AoxI | GGCC | 5 cut(s) | 453, 571, 716, 833, 1180 |
| ApeKI | GCWGC | 2 cut(s) | 58, 1235 |
| ApoI | RAATTY | 3 cut(s) | 44, 852, 1100 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 326, 358 |
| AseI | ATTAAT | 1 cut(s) | 1302 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 269, 1654 |
| AspS9I | GGNCC | 1 cut(s) | 1180 |
| AsuHPI | GGTGA | 7 cut(s) | 336, 465, 625, 759, 765, 1307, 1441 |
| AxyI | CCTNAGG | 1 cut(s) | 606 |
| BalI | TGGCCA | 2 cut(s) | 455, 718 |
| BanI | GGYRCC | 1 cut(s) | 1619 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 71, 103 |
| BbsI | GAAGAC | 2 cut(s) | 462, 1319 |
| Bbv12I | GWGCWC | 1 cut(s) | 1403 |
| BbvI | GCAGC | 2 cut(s) | 70, 1247 |
| BccI | CCATC | 5 cut(s) | 299, 754, 772, 778, 1532 |
| BceAI | ACGGC | 2 cut(s) | 558, 645 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1181, 1215 |
| BciT130I | CCWGG | 3 cut(s) | 285, 369, 1502 |
| BciVI | GTATCC | 1 cut(s) | 80 |
| BcoDI | GTCTC | 3 cut(s) | 212, 931, 1149 |
| BcuI | ACTAGT | 1 cut(s) | 221 |
| BfaI | CTAG | 6 cut(s) | 189, 222, 351, 894, 1209, 1272 |
| BfmI | CTRYAG | 1 cut(s) | 382 |
| BfuI | GTATCC | 1 cut(s) | 80 |
| BisI | GCNGC | 4 cut(s) | 59, 836, 903, 1236 |
| BlpI | GCTNAGC | 1 cut(s) | 1397 |
| BlsI | GCNGC | 4 cut(s) | 60, 837, 904, 1237 |
| Bme1390I | CCNGG | 3 cut(s) | 285, 369, 1502 |
| BmgT120I | GGNCC | 1 cut(s) | 1180 |
| BmiI | GGNNCC | 1 cut(s) | 1621 |
| BmrFI | CCNGG | 3 cut(s) | 285, 369, 1502 |
| BmrI | ACTGGG | 1 cut(s) | 183 |
| BmsI | GCATC | 5 cut(s) | 659, 750, 1195, 1246, 1333 |
| BmuI | ACTGGG | 1 cut(s) | 183 |
| BpiI | GAAGAC | 2 cut(s) | 462, 1319 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 602, 634 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1397 |
| BsaJI | CCNNGG | 1 cut(s) | 367 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1393, 1423, 1479, 1509 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 112, 704, 845, 1028 |
| Bse118I | RCCGGY | 1 cut(s) | 1622 |
| Bse1I | ACTGG | 7 cut(s) | 178, 319, 456, 555, 642, 709, 719 |
| Bse21I | CCTNAGG | 1 cut(s) | 606 |
| Bse3DI | GCAATG | 2 cut(s) | 326, 912 |
| BseBI | CCWGG | 3 cut(s) | 285, 369, 1502 |
| BseDI | CCNNGG | 1 cut(s) | 367 |
| BseGI | GGATG | 4 cut(s) | 207, 765, 1510, 1543 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 112, 704, 845, 1028 |
| BseMI | GCAATG | 2 cut(s) | 326, 912 |
| BseMII | CTCAG | 2 cut(s) | 597, 1388 |
| BseNI | ACTGG | 7 cut(s) | 178, 319, 456, 555, 642, 709, 719 |
| BseRI | GAGGAG | 3 cut(s) | 623, 1123, 1336 |
| BseXI | GCAGC | 2 cut(s) | 70, 1247 |
| BseYI | CCCAGC | 1 cut(s) | 1566 |
| BsgI | GTGCAG | 2 cut(s) | 965, 1254 |
| BshFI | GGCC | 5 cut(s) | 455, 573, 718, 835, 1182 |
| BshNI | GGYRCC | 1 cut(s) | 1619 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1403 |
| BsiSI | CCGG | 1 cut(s) | 1623 |
| BslFI | GGGAC | 1 cut(s) | 350 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 112, 704, 845, 1028 |
| BsmAI | GTCTC | 3 cut(s) | 212, 931, 1149 |
| BsmFI | GGGAC | 1 cut(s) | 350 |
| BsnI | GGCC | 5 cut(s) | 455, 573, 718, 835, 1182 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1403 |
| Bsp143I | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1397 |
| BspACI | CCGC | 4 cut(s) | 757, 836, 902, 1638 |
| BspANI | GGCC | 5 cut(s) | 455, 573, 718, 835, 1182 |
| BspCNI | CTCAG | 2 cut(s) | 598, 1389 |
| BspHI | TCATGA | 1 cut(s) | 823 |
| BspLI | GGNNCC | 1 cut(s) | 1621 |
| BspPI | GGATC | 4 cut(s) | 123, 526, 1005, 1140 |
| BspQI | GCTCTTC | 1 cut(s) | 1068 |
| BspT107I | GGYRCC | 1 cut(s) | 1619 |
| BsrDI | GCAATG | 2 cut(s) | 326, 912 |
| BsrFI | RCCGGY | 1 cut(s) | 1622 |
| BsrI | ACTGG | 7 cut(s) | 178, 319, 456, 555, 642, 709, 719 |
| BssAI | RCCGGY | 1 cut(s) | 1622 |
| BssECI | CCNNGG | 1 cut(s) | 367 |
| BssMI | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| Bst2UI | CCWGG | 3 cut(s) | 285, 369, 1502 |
| Bst4CI | ACNGT | 3 cut(s) | 92, 688, 1187 |
| Bst6I | CTCTTC | 5 cut(s) | 62, 210, 255, 699, 1068 |
| BstC8I | GCNNGC | 3 cut(s) | 339, 1356, 1624 |
| BstDEI | CTNAG | 4 cut(s) | 606, 674, 969, 1397 |
| BstEII | GGTNACC | 1 cut(s) | 613 |
| BstF5I | GGATG | 4 cut(s) | 207, 765, 1510, 1543 |
| BstKTI | GATC | 5 cut(s) | 118, 521, 1000, 1135, 1285 |
| BstMAI | GTCTC | 3 cut(s) | 212, 931, 1149 |
| BstMBI | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 347, 647 |
| BstNI | CCWGG | 3 cut(s) | 285, 369, 1502 |
| BstNSI | RCATGY | 3 cut(s) | 341, 944, 1337 |
| BstPI | GGTNACC | 1 cut(s) | 613 |
| BstSCI | CCNGG | 3 cut(s) | 283, 367, 1500 |
| BstSFI | CTRYAG | 1 cut(s) | 382 |
| BstV1I | GCAGC | 2 cut(s) | 70, 1247 |
| BstV2I | GAAGAC | 2 cut(s) | 462, 1319 |
| Bsu36I | CCTNAGG | 1 cut(s) | 606 |
| BsuI | GTATCC | 1 cut(s) | 80 |
| BsuRI | GGCC | 5 cut(s) | 455, 573, 718, 835, 1182 |
| BtsCI | GGATG | 4 cut(s) | 207, 765, 1510, 1543 |
| BtsIMutI | CAGTG | 2 cut(s) | 468, 702 |
| Cac8I | GCNNGC | 3 cut(s) | 339, 1356, 1624 |
| CaiI | CAGNNNCTG | 2 cut(s) | 605, 1412 |
| CciI | TCATGA | 1 cut(s) | 823 |
| Cfr10I | RCCGGY | 1 cut(s) | 1622 |
| Cfr13I | GGNCC | 1 cut(s) | 1180 |
| CseI | GACGC | 2 cut(s) | 330, 1584 |
| Csp6I | GTAC | 4 cut(s) | 231, 291, 429, 1167 |
| CviAII | CATG | 9 cut(s) | 166, 212, 338, 647, 824, 941, 1028, 1087, 1334 |
| CviQI | GTAC | 4 cut(s) | 231, 291, 429, 1167 |
| DdeI | CTNAG | 4 cut(s) | 606, 674, 969, 1397 |
| DpnI | GATC | 5 cut(s) | 117, 520, 999, 1134, 1284 |
| DpnII | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| EaeI | YGGCCR | 3 cut(s) | 453, 571, 716 |
| Eam1104I | CTCTTC | 5 cut(s) | 62, 210, 255, 699, 1068 |
| EarI | CTCTTC | 5 cut(s) | 62, 210, 255, 699, 1068 |
| Eco57I | CTGAAG | 5 cut(s) | 233, 977, 1092, 1344, 1578 |
| Eco81I | CCTNAGG | 1 cut(s) | 606 |
| Eco91I | GGTNACC | 1 cut(s) | 613 |
| EcoO65I | GGTNACC | 1 cut(s) | 613 |
| EcoRII | CCWGG | 3 cut(s) | 283, 367, 1500 |
| EcoT22I | ATGCAT | 1 cut(s) | 652 |
| FaeI | CATG | 9 cut(s) | 169, 215, 341, 650, 827, 944, 1031, 1090, 1337 |
| FaqI | GGGAC | 1 cut(s) | 350 |
| FatI | CATG | 9 cut(s) | 165, 211, 337, 646, 823, 940, 1027, 1086, 1333 |
| FauI | CCCGC | 1 cut(s) | 1645 |
| FauNDI | CATATG | 1 cut(s) | 568 |
| Fnu4HI | GCNGC | 4 cut(s) | 59, 836, 903, 1236 |
| FokI | GGATG | 4 cut(s) | 194, 772, 1517, 1550 |
| Fsp4HI | GCNGC | 4 cut(s) | 59, 836, 903, 1236 |
| FspBI | CTAG | 6 cut(s) | 189, 222, 351, 894, 1209, 1272 |
| GluI | GCNGC | 4 cut(s) | 59, 836, 903, 1236 |
| GsaI | CCCAGC | 1 cut(s) | 1570 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HaeIII | GGCC | 5 cut(s) | 455, 573, 718, 835, 1182 |
| HapII | CCGG | 1 cut(s) | 1623 |
| HgaI | GACGC | 2 cut(s) | 330, 1584 |
| Hin1II | CATG | 9 cut(s) | 169, 215, 341, 650, 827, 944, 1031, 1090, 1337 |
| HinfI | GANTC | 6 cut(s) | 236, 280, 920, 1174, 1327, 1562 |
| HpaII | CCGG | 1 cut(s) | 1623 |
| HphI | GGTGA | 7 cut(s) | 336, 465, 625, 759, 765, 1307, 1441 |
| Hpy166II | GTNNAC | 5 cut(s) | 184, 293, 712, 1498, 1663 |
| Hpy188I | TCNGA | 6 cut(s) | 154, 523, 889, 990, 1107, 1363 |
| Hpy188III | TCNNGA | 9 cut(s) | 588, 605, 824, 1192, 1214, 1272, 1412, 1556, 1647 |
| Hpy8I | GTNNAC | 5 cut(s) | 184, 293, 712, 1498, 1663 |
| HpyAV | CCTTC | 9 cut(s) | 73, 131, 558, 645, 849, 952, 1189, 1270, 1604 |
| HpyCH4III | ACNGT | 3 cut(s) | 92, 688, 1187 |
| HpyCH4V | TGCA | 8 cut(s) | 362, 599, 650, 946, 1202, 1235, 1333, 1346 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 347, 647 |
| HpyF3I | CTNAG | 4 cut(s) | 606, 674, 969, 1397 |
| Hsp92II | CATG | 9 cut(s) | 169, 215, 341, 650, 827, 944, 1031, 1090, 1337 |
| KroI | GCCGGC | 1 cut(s) | 1622 |
| KroNI | GCCGGC | 1 cut(s) | 1624 |
| Kzo9I | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| LguI | GCTCTTC | 1 cut(s) | 1068 |
| LmnI | GCTCC | 1 cut(s) | 1414 |
| Lsp1109I | GCAGC | 2 cut(s) | 70, 1247 |
| LweI | GCATC | 5 cut(s) | 659, 750, 1195, 1246, 1333 |
| MaeI | CTAG | 6 cut(s) | 189, 222, 351, 894, 1209, 1272 |
| MaeIII | GTNAC | 4 cut(s) | 342, 499, 613, 682 |
| MalI | GATC | 5 cut(s) | 117, 520, 999, 1134, 1284 |
| MboI | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| MfeI | CAATTG | 2 cut(s) | 1424, 1629 |
| MhlI | GDGCHC | 1 cut(s) | 1403 |
| MlsI | TGGCCA | 2 cut(s) | 455, 718 |
| MluNI | TGGCCA | 2 cut(s) | 455, 718 |
| MmeI | TCCRAC | 1 cut(s) | 461 |
| Mox20I | TGGCCA | 2 cut(s) | 455, 718 |
| Mph1103I | ATGCAT | 1 cut(s) | 652 |
| MroNI | GCCGGC | 1 cut(s) | 1622 |
| MroXI | GAANNNNTTC | 2 cut(s) | 269, 1654 |
| MscI | TGGCCA | 2 cut(s) | 455, 718 |
| MseI | TTAA | 6 cut(s) | 389, 786, 1010, 1302, 1514, 1520 |
| MslI | CAYNNNNRTG | 2 cut(s) | 705, 707 |
| Msp20I | TGGCCA | 2 cut(s) | 455, 718 |
| MspA1I | CMGCKG | 1 cut(s) | 1238 |
| MspI | CCGG | 1 cut(s) | 1623 |
| MspR9I | CCNGG | 3 cut(s) | 285, 369, 1502 |
| MunI | CAATTG | 2 cut(s) | 1424, 1629 |
| MvaI | CCWGG | 3 cut(s) | 285, 369, 1502 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 347, 647 |
| NaeI | GCCGGC | 1 cut(s) | 1624 |
| NdeI | CATATG | 1 cut(s) | 568 |
| NdeII | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| NgoMIV | GCCGGC | 1 cut(s) | 1622 |
| NlaIII | CATG | 9 cut(s) | 169, 215, 341, 650, 827, 944, 1031, 1090, 1337 |
| NlaIV | GGNNCC | 1 cut(s) | 1621 |
| NmuCI | GTSAC | 2 cut(s) | 342, 613 |
| NsiI | ATGCAT | 1 cut(s) | 652 |
| NspI | RCATGY | 3 cut(s) | 341, 944, 1337 |
| OliI | CACNNNNGTG | 2 cut(s) | 705, 707 |
| PaeI | GCATGC | 1 cut(s) | 341 |
| PagI | TCATGA | 1 cut(s) | 823 |
| PciI | ACATGT | 1 cut(s) | 940 |
| PciSI | GCTCTTC | 1 cut(s) | 1068 |
| PdiI | GCCGGC | 1 cut(s) | 1624 |
| PdmI | GAANNNNTTC | 2 cut(s) | 269, 1654 |
| PfeI | GAWTC | 6 cut(s) | 236, 280, 920, 1174, 1327, 1562 |
| PfoI | TCCNGGA | 1 cut(s) | 283 |
| PkrI | GCNGC | 4 cut(s) | 60, 837, 904, 1237 |
| PscI | ACATGT | 1 cut(s) | 940 |
| PshBI | ATTAAT | 1 cut(s) | 1302 |
| Psp6I | CCWGG | 3 cut(s) | 283, 367, 1500 |
| PspEI | GGTNACC | 1 cut(s) | 613 |
| PspFI | CCCAGC | 1 cut(s) | 1566 |
| PspGI | CCWGG | 3 cut(s) | 283, 367, 1500 |
| PspN4I | GGNNCC | 1 cut(s) | 1621 |
| PspPI | GGNCC | 1 cut(s) | 1180 |
| PstNI | CAGNNNCTG | 2 cut(s) | 605, 1412 |
| PvuII | CAGCTG | 1 cut(s) | 1238 |
| RsaI | GTAC | 4 cut(s) | 232, 292, 430, 1168 |
| RsaNI | GTAC | 4 cut(s) | 231, 291, 429, 1167 |
| RseI | CAYNNNNRTG | 2 cut(s) | 705, 707 |
| SapI | GCTCTTC | 1 cut(s) | 1068 |
| SaqAI | TTAA | 6 cut(s) | 389, 786, 1010, 1302, 1514, 1520 |
| SatI | GCNGC | 4 cut(s) | 59, 836, 903, 1236 |
| Sau3AI | GATC | 5 cut(s) | 115, 518, 997, 1132, 1282 |
| Sau96I | GGNCC | 1 cut(s) | 1180 |
| ScrFI | CCNGG | 3 cut(s) | 285, 369, 1502 |
| SduI | GDGCHC | 1 cut(s) | 1403 |
| SfaNI | GCATC | 5 cut(s) | 659, 750, 1195, 1246, 1333 |
| SfcI | CTRYAG | 1 cut(s) | 382 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 705, 707 |
| SpeI | ACTAGT | 1 cut(s) | 221 |
| SphI | GCATGC | 1 cut(s) | 341 |
| SsiI | CCGC | 4 cut(s) | 757, 836, 902, 1638 |
| SspI | AATATT | 1 cut(s) | 1066 |
| SspMI | CTAG | 6 cut(s) | 189, 222, 351, 894, 1209, 1272 |
| StyD4I | CCNGG | 3 cut(s) | 283, 367, 1500 |
| TaaI | ACNGT | 3 cut(s) | 92, 688, 1187 |
| TaqI | TCGA | 2 cut(s) | 118, 1191 |
| TatI | WGTACW | 3 cut(s) | 290, 428, 1166 |
| TauI | GCSGC | 2 cut(s) | 838, 905 |
| TfiI | GAWTC | 6 cut(s) | 236, 280, 920, 1174, 1327, 1562 |
| Tru1I | TTAA | 6 cut(s) | 389, 786, 1010, 1302, 1514, 1520 |
| Tru9I | TTAA | 6 cut(s) | 389, 786, 1010, 1302, 1514, 1520 |
| TscAI | CASTG | 2 cut(s) | 468, 709 |
| TseFI | GTSAC | 2 cut(s) | 342, 613 |
| TseI | GCWGC | 2 cut(s) | 58, 1235 |
| Tsp45I | GTSAC | 2 cut(s) | 342, 613 |
| TspDTI | ATGAA | 7 cut(s) | 17, 80, 228, 840, 1016, 1392, 1521 |
| TspGWI | ACGGA | 1 cut(s) | 868 |
| TspRI | CASTG | 2 cut(s) | 468, 709 |
| VspI | ATTAAT | 1 cut(s) | 1302 |
| XapI | RAATTY | 3 cut(s) | 44, 852, 1100 |
| XbaI | TCTAGA | 1 cut(s) | 1271 |
| XceI | RCATGY | 3 cut(s) | 341, 944, 1337 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 448 |
| XmnI | GAANNNNTTC | 2 cut(s) | 269, 1654 |
| XspI | CTAG | 6 cut(s) | 189, 222, 351, 894, 1209, 1272 |
| Zsp2I | ATGCAT | 1 cut(s) | 652 |