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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3728 |
| AarI | CACCTGC | 1 cut(s) | 1718 |
| AatII | GACGTC | 1 cut(s) | 2432 |
| Acc36I | ACCTGC | 5 cut(s) | 1718, 2187, 2443, 2695, 2988 |
| AccB1I | GGYRCC | 2 cut(s) | 71, 2129 |
| AccBSI | CCGCTC | 1 cut(s) | 3702 |
| AccI | GTMKAC | 1 cut(s) | 59 |
| AccII | CGCG | 2 cut(s) | 610, 2098 |
| AclWI | GGATC | 6 cut(s) | 135, 330, 946, 1530, 1665, 2974 |
| AcoI | YGGCCR | 1 cut(s) | 873 |
| AcsI | RAATTY | 9 cut(s) | 248, 660, 1266, 1625, 2609, 2666, 3089, 3798, 3829 |
| AcuI | CTGAAG | 5 cut(s) | 38, 440, 1617, 1869, 2277 |
| AcyI | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| AdeI | CACNNNGTG | 1 cut(s) | 3518 |
| AflII | CTTAAG | 1 cut(s) | 3686 |
| AflIII | ACRYGT | 1 cut(s) | 1465 |
| AgeI | ACCGGT | 1 cut(s) | 916 |
| AhlI | ACTAGT | 1 cut(s) | 428 |
| AjnI | CCWGG | 6 cut(s) | 574, 1231, 2010, 2752, 2962, 3362 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 532, 564 |
| AleI | CACNNNNGTG | 2 cut(s) | 1125, 1127 |
| Alw21I | GWGCWC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| Alw26I | GTCTC | 4 cut(s) | 419, 1456, 1674, 3852 |
| AlwI | GGATC | 6 cut(s) | 135, 330, 946, 1530, 1665, 2974 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1937, 3746 |
| AoxI | GGCC | 7 cut(s) | 873, 1316, 1705, 2267, 2764, 3718, 3862 |
| ApeKI | GCWGC | 9 cut(s) | 265, 1760, 2554, 3302, 3392, 3558, 3628, 3773, 3785 |
| ApoI | RAATTY | 9 cut(s) | 248, 660, 1266, 1625, 2609, 2666, 3089, 3798, 3829 |
| AseI | ATTAAT | 2 cut(s) | 1377, 3603 |
| AsiGI | ACCGGT | 1 cut(s) | 916 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 476, 2164, 2374, 3342 |
| AspLEI | GCGC | 3 cut(s) | 74, 610, 2602 |
| AspS9I | GGNCC | 5 cut(s) | 815, 1316, 1705, 3863, 3905 |
| AsuC2I | CCSGG | 2 cut(s) | 492, 3942 |
| AvaII | GGWCC | 2 cut(s) | 815, 3905 |
| AxyI | CCTNAGG | 1 cut(s) | 1026 |
| BalI | TGGCCA | 1 cut(s) | 875 |
| BanI | GGYRCC | 2 cut(s) | 71, 2129 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 278, 310, 2721, 2753 |
| BauI | CACGAG | 1 cut(s) | 2229 |
| BbsI | GAAGAC | 6 cut(s) | 45, 882, 1844, 2265, 2312, 3698 |
| Bbv12I | GWGCWC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| BbvI | GCAGC | 9 cut(s) | 277, 1772, 2566, 3314, 3379, 3570, 3640, 3760, 3797 |
| BccI | CCATC | 7 cut(s) | 506, 1174, 1192, 1714, 2669, 3710, 3745 |
| BceAI | ACGGC | 4 cut(s) | 59, 85, 1065, 3268 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1706, 1740 |
| BciT130I | CCWGG | 6 cut(s) | 576, 1233, 2012, 2754, 2964, 3364 |
| BciVI | GTATCC | 3 cut(s) | 169, 287, 3361 |
| BclI | TGATCA | 2 cut(s) | 3385, 3502 |
| BcnI | CCSGG | 2 cut(s) | 492, 3942 |
| BcoDI | GTCTC | 4 cut(s) | 419, 1456, 1674, 3852 |
| BcuI | ACTAGT | 1 cut(s) | 428 |
| BfmI | CTRYAG | 2 cut(s) | 3530, 3626 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 3686 |
| BfuAI | ACCTGC | 5 cut(s) | 1718, 2187, 2443, 2695, 2988 |
| BfuI | GTATCC | 3 cut(s) | 169, 287, 3361 |
| BlpI | GCTNAGC | 2 cut(s) | 1922, 2700 |
| Bme1390I | CCNGG | 8 cut(s) | 492, 576, 1233, 2012, 2754, 2964, 3364, 3942 |
| Bme18I | GGWCC | 2 cut(s) | 815, 3905 |
| BmgT120I | GGNCC | 5 cut(s) | 815, 1316, 1705, 3863, 3905 |
| BmiI | GGNNCC | 5 cut(s) | 73, 1237, 1317, 2131, 2955 |
| BmrFI | CCNGG | 8 cut(s) | 492, 576, 1233, 2012, 2754, 2964, 3364, 3942 |
| BmrI | ACTGGG | 1 cut(s) | 2826 |
| BmuI | ACTGGG | 1 cut(s) | 2826 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2316 |
| BpiI | GAAGAC | 6 cut(s) | 45, 882, 1844, 2265, 2312, 3698 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1022, 1054, 2966, 2998, 3395, 3427 |
| BpmI | CTGGAG | 2 cut(s) | 2955, 3810 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1922, 2700 |
| BpuEI | CTTGAG | 1 cut(s) | 1466 |
| BpuMI | CCSGG | 2 cut(s) | 492, 3942 |
| BsaBI | GATNNNNATC | 3 cut(s) | 9, 26, 2361 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| BsaJI | CCNNGG | 5 cut(s) | 2753, 3318, 3363, 3468, 3940 |
| BsaWI | WCCGGW | 1 cut(s) | 916 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1918, 1948, 1989, 2019 |
| Bse118I | RCCGGY | 2 cut(s) | 916, 3874 |
| Bse21I | CCTNAGG | 1 cut(s) | 1026 |
| Bse3DI | GCAATG | 2 cut(s) | 533, 1437 |
| Bse8I | GATNNNNATC | 3 cut(s) | 9, 26, 2361 |
| BseBI | CCWGG | 6 cut(s) | 576, 1233, 2012, 2754, 2964, 3364 |
| BseDI | CCNNGG | 5 cut(s) | 2753, 3318, 3363, 3468, 3940 |
| BseJI | GATNNNNATC | 3 cut(s) | 9, 26, 2361 |
| BseMI | GCAATG | 2 cut(s) | 533, 1437 |
| BseMII | CTCAG | 6 cut(s) | 1017, 1187, 1913, 2561, 2997, 3018 |
| BseRI | GAGGAG | 5 cut(s) | 1043, 1648, 2990, 3840, 3843 |
| BseXI | GCAGC | 9 cut(s) | 277, 1772, 2566, 3314, 3379, 3570, 3640, 3760, 3797 |
| BseYI | CCCAGC | 2 cut(s) | 1355, 2076 |
| BsgI | GTGCAG | 1 cut(s) | 1779 |
| Bsh1236I | CGCG | 2 cut(s) | 610, 2098 |
| BshFI | GGCC | 7 cut(s) | 875, 1318, 1707, 2269, 2766, 3720, 3864 |
| BshNI | GGYRCC | 2 cut(s) | 71, 2129 |
| BshTI | ACCGGT | 1 cut(s) | 916 |
| BsiHKAI | GWGCWC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| BsiSI | CCGG | 5 cut(s) | 33, 491, 917, 3875, 3942 |
| BslFI | GGGAC | 2 cut(s) | 1372, 2416 |
| BsmAI | GTCTC | 4 cut(s) | 419, 1456, 1674, 3852 |
| BsmFI | GGGAC | 2 cut(s) | 1372, 2416 |
| BsmI | GAATGC | 2 cut(s) | 1542, 3525 |
| BsnI | GGCC | 7 cut(s) | 875, 1318, 1707, 2269, 2766, 3720, 3864 |
| Bsp1286I | GDGCHC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| Bsp1407I | TGTACA | 2 cut(s) | 3823, 3917 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1922, 2700 |
| Bsp19I | CCATGG | 1 cut(s) | 3318 |
| BspANI | GGCC | 7 cut(s) | 875, 1318, 1707, 2269, 2766, 3720, 3864 |
| BspCNI | CTCAG | 6 cut(s) | 1018, 1188, 1914, 2560, 2996, 3017 |
| BspFNI | CGCG | 2 cut(s) | 610, 2098 |
| BspHI | TCATGA | 3 cut(s) | 1306, 2389, 2613 |
| BspLI | GGNNCC | 5 cut(s) | 73, 1237, 1317, 2131, 2955 |
| BspMAI | CTGCAG | 2 cut(s) | 3534, 3630 |
| BspMI | ACCTGC | 5 cut(s) | 1718, 2187, 2443, 2695, 2988 |
| BspPI | GGATC | 6 cut(s) | 135, 330, 946, 1530, 1665, 2974 |
| BspQI | GCTCTTC | 1 cut(s) | 1593 |
| BspT107I | GGYRCC | 2 cut(s) | 71, 2129 |
| BspTI | CTTAAG | 1 cut(s) | 3686 |
| BsrBI | CCGCTC | 1 cut(s) | 3702 |
| BsrDI | GCAATG | 2 cut(s) | 533, 1437 |
| BsrFI | RCCGGY | 2 cut(s) | 916, 3874 |
| BsrGI | TGTACA | 2 cut(s) | 3823, 3917 |
| BssAI | RCCGGY | 2 cut(s) | 916, 3874 |
| BssECI | CCNNGG | 5 cut(s) | 2753, 3318, 3363, 3468, 3940 |
| BssNI | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| BssSI | CACGAG | 1 cut(s) | 2229 |
| BssT1I | CCWWGG | 2 cut(s) | 3318, 3468 |
| Bst2BI | CACGAG | 1 cut(s) | 2229 |
| Bst2UI | CCWGG | 6 cut(s) | 576, 1233, 2012, 2754, 2964, 3364 |
| Bst4CI | ACNGT | 6 cut(s) | 727, 1363, 1712, 2301, 2825, 3350 |
| Bst6I | CTCTTC | 8 cut(s) | 269, 417, 462, 1119, 1593, 2365, 2634, 2790 |
| BstACI | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| BstAFI | CTTAAG | 1 cut(s) | 3686 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3134, 3578 |
| BstAUI | TGTACA | 2 cut(s) | 3823, 3917 |
| BstC8I | GCNNGC | 8 cut(s) | 122, 546, 586, 1473, 1881, 2134, 2331, 3126 |
| BstDSI | CCRYGG | 1 cut(s) | 3318 |
| BstEII | GGTNACC | 1 cut(s) | 1033 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3858 |
| BstFNI | CGCG | 2 cut(s) | 610, 2098 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 3 cut(s) | 74, 610, 2602 |
| BstMAI | GTCTC | 4 cut(s) | 419, 1456, 1674, 3852 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2468, 3134, 3578, 3782 |
| BstNI | CCWGG | 6 cut(s) | 576, 1233, 2012, 2754, 2964, 3364 |
| BstNSI | RCATGY | 4 cut(s) | 548, 1469, 1862, 3462 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2316 |
| BstPI | GGTNACC | 1 cut(s) | 1033 |
| BstSCI | CCNGG | 8 cut(s) | 490, 574, 1231, 2010, 2752, 2962, 3362, 3940 |
| BstSFI | CTRYAG | 2 cut(s) | 3530, 3626 |
| BstUI | CGCG | 2 cut(s) | 610, 2098 |
| BstV1I | GCAGC | 9 cut(s) | 277, 1772, 2566, 3314, 3379, 3570, 3640, 3760, 3797 |
| BstV2I | GAAGAC | 6 cut(s) | 45, 882, 1844, 2265, 2312, 3698 |
| BstX2I | RGATCY | 2 cut(s) | 140, 2966 |
| BstYI | RGATCY | 2 cut(s) | 140, 2966 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1026 |
| BsuI | GTATCC | 3 cut(s) | 169, 287, 3361 |
| BsuRI | GGCC | 7 cut(s) | 875, 1318, 1707, 2269, 2766, 3720, 3864 |
| BtgI | CCRYGG | 1 cut(s) | 3318 |
| BtsI | GCAGTG | 3 cut(s) | 391, 646, 1422 |
| BveI | ACCTGC | 5 cut(s) | 1718, 2187, 2443, 2695, 2988 |
| Cac8I | GCNNGC | 8 cut(s) | 122, 546, 586, 1473, 1881, 2134, 2331, 3126 |
| CaiI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1937, 3746 |
| CciI | TCATGA | 3 cut(s) | 1306, 2389, 2613 |
| CfoI | GCGC | 3 cut(s) | 74, 610, 2602 |
| Cfr10I | RCCGGY | 2 cut(s) | 916, 3874 |
| Cfr13I | GGNCC | 5 cut(s) | 815, 1316, 1705, 3863, 3905 |
| CseI | GACGC | 1 cut(s) | 113 |
| CsiI | ACCWGGT | 1 cut(s) | 574 |
| CspAI | ACCGGT | 1 cut(s) | 916 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 607, 642, 3796, 3831 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DraI | TTTAAA | 2 cut(s) | 2412, 2506 |
| DraIII | CACNNNGTG | 1 cut(s) | 3518 |
| EaeI | YGGCCR | 1 cut(s) | 873 |
| Eam1104I | CTCTTC | 8 cut(s) | 269, 417, 462, 1119, 1593, 2365, 2634, 2790 |
| EarI | CTCTTC | 8 cut(s) | 269, 417, 462, 1119, 1593, 2365, 2634, 2790 |
| EciI | GGCGGA | 1 cut(s) | 1490 |
| Eco130I | CCWWGG | 2 cut(s) | 3318, 3468 |
| Eco32I | GATATC | 1 cut(s) | 2833 |
| Eco47I | GGWCC | 2 cut(s) | 815, 3905 |
| Eco57I | CTGAAG | 5 cut(s) | 38, 440, 1617, 1869, 2277 |
| Eco81I | CCTNAGG | 1 cut(s) | 1026 |
| Eco91I | GGTNACC | 1 cut(s) | 1033 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3858 |
| EcoO65I | GGTNACC | 1 cut(s) | 1033 |
| EcoRI | GAATTC | 1 cut(s) | 3829 |
| EcoRII | CCWGG | 6 cut(s) | 574, 1231, 2010, 2752, 2962, 3362 |
| EcoRV | GATATC | 1 cut(s) | 2833 |
| EcoT14I | CCWWGG | 2 cut(s) | 3318, 3468 |
| EcoT22I | ATGCAT | 1 cut(s) | 1072 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 2 cut(s) | 3318, 3468 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 301, 333, 3705, 3737 |
| FaqI | GGGAC | 2 cut(s) | 1372, 2416 |
| FauI | CCCGC | 4 cut(s) | 270, 577, 1464, 2155 |
| FauNDI | CATATG | 1 cut(s) | 988 |
| FbaI | TGATCA | 2 cut(s) | 3385, 3502 |
| FblI | GTMKAC | 1 cut(s) | 59 |
| GlaI | GCGC | 3 cut(s) | 73, 609, 2601 |
| GsaI | CCCAGC | 2 cut(s) | 1359, 2080 |
| GsuI | CTGGAG | 2 cut(s) | 2955, 3810 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 7 cut(s) | 875, 1318, 1707, 2269, 2766, 3720, 3864 |
| HapII | CCGG | 5 cut(s) | 33, 491, 917, 3875, 3942 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 3 cut(s) | 74, 610, 2602 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| Hin6I | GCGC | 3 cut(s) | 72, 608, 2600 |
| HinP1I | GCGC | 3 cut(s) | 72, 608, 2600 |
| HincII | GTYRAC | 2 cut(s) | 60, 3280 |
| HindII | GTYRAC | 2 cut(s) | 60, 3280 |
| HindIII | AAGCTT | 2 cut(s) | 1218, 2331 |
| HpaII | CCGG | 5 cut(s) | 33, 491, 917, 3875, 3942 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 107, 2431 |
| HpyCH4III | ACNGT | 6 cut(s) | 727, 1363, 1712, 2301, 2825, 3350 |
| HpyCH4IV | ACGT | 3 cut(s) | 720, 2429, 2652 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2468, 3134, 3578, 3782 |
| HpySE526I | ACGT | 3 cut(s) | 720, 2429, 2652 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 105, 2429 |
| HspAI | GCGC | 3 cut(s) | 72, 608, 2600 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| Ksp22I | TGATCA | 2 cut(s) | 3385, 3502 |
| LguI | GCTCTTC | 1 cut(s) | 1593 |
| LmnI | GCTCC | 4 cut(s) | 1241, 1939, 3233, 3699 |
| Lsp1109I | GCAGC | 9 cut(s) | 277, 1772, 2566, 3314, 3379, 3570, 3640, 3760, 3797 |
| MabI | ACCWGGT | 1 cut(s) | 574 |
| MaeII | ACGT | 3 cut(s) | 720, 2429, 2652 |
| MaeIII | GTNAC | 4 cut(s) | 721, 919, 1033, 1345 |
| MbiI | CCGCTC | 1 cut(s) | 3702 |
| MfeI | CAATTG | 3 cut(s) | 1949, 2481, 3777 |
| MflI | RGATCY | 2 cut(s) | 140, 2966 |
| MhlI | GDGCHC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| MlsI | TGGCCA | 1 cut(s) | 875 |
| MluNI | TGGCCA | 1 cut(s) | 875 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 8 cut(s) | 38, 55, 760, 2114, 2216, 2987, 3404, 3413 |
| MmeI | TCCRAC | 2 cut(s) | 154, 881 |
| Mox20I | TGGCCA | 1 cut(s) | 875 |
| Mph1103I | ATGCAT | 1 cut(s) | 1072 |
| MroXI | GAANNNNTTC | 4 cut(s) | 476, 2164, 2374, 3342 |
| MscI | TGGCCA | 1 cut(s) | 875 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1125, 1127, 1258 |
| Msp20I | TGGCCA | 1 cut(s) | 875 |
| MspA1I | CMGCKG | 1 cut(s) | 3788 |
| MspCI | CTTAAG | 1 cut(s) | 3686 |
| MspI | CCGG | 5 cut(s) | 33, 491, 917, 3875, 3942 |
| MspR9I | CCNGG | 8 cut(s) | 492, 576, 1233, 2012, 2754, 2964, 3364, 3942 |
| MunI | CAATTG | 3 cut(s) | 1949, 2481, 3777 |
| Mva1269I | GAATGC | 2 cut(s) | 1542, 3525 |
| MvaI | CCWGG | 6 cut(s) | 576, 1233, 2012, 2754, 2964, 3364 |
| MvnI | CGCG | 2 cut(s) | 610, 2098 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 554, 607, 636, 1067, 2468, 3134, 3578, 3782 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NciI | CCSGG | 2 cut(s) | 492, 3942 |
| NcoI | CCATGG | 1 cut(s) | 3318 |
| NdeI | CATATG | 1 cut(s) | 988 |
| NlaIV | GGNNCC | 5 cut(s) | 73, 1237, 1317, 2131, 2955 |
| NmuCI | GTSAC | 3 cut(s) | 721, 1033, 1345 |
| NsiI | ATGCAT | 1 cut(s) | 1072 |
| NspI | RCATGY | 4 cut(s) | 548, 1469, 1862, 3462 |
| OliI | CACNNNNGTG | 2 cut(s) | 1125, 1127 |
| PaeI | GCATGC | 1 cut(s) | 548 |
| PagI | TCATGA | 3 cut(s) | 1306, 2389, 2613 |
| PaqCI | CACCTGC | 1 cut(s) | 1718 |
| PciI | ACATGT | 1 cut(s) | 1465 |
| PciSI | GCTCTTC | 1 cut(s) | 1593 |
| PctI | GAATGC | 2 cut(s) | 1542, 3525 |
| PdmI | GAANNNNTTC | 4 cut(s) | 476, 2164, 2374, 3342 |
| PfoI | TCCNGGA | 1 cut(s) | 490 |
| PinAI | ACCGGT | 1 cut(s) | 916 |
| PleI | GAGTC | 8 cut(s) | 38, 55, 759, 2113, 2216, 2986, 3404, 3412 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 8 cut(s) | 38, 55, 759, 2113, 2216, 2986, 3404, 3412 |
| PscI | ACATGT | 1 cut(s) | 1465 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2316 |
| PshBI | ATTAAT | 2 cut(s) | 1377, 3603 |
| PsiI | TTATAA | 1 cut(s) | 3728 |
| Psp6I | CCWGG | 6 cut(s) | 574, 1231, 2010, 2752, 2962, 3362 |
| PspEI | GGTNACC | 1 cut(s) | 1033 |
| PspFI | CCCAGC | 2 cut(s) | 1355, 2076 |
| PspGI | CCWGG | 6 cut(s) | 574, 1231, 2010, 2752, 2962, 3362 |
| PspN4I | GGNNCC | 5 cut(s) | 73, 1237, 1317, 2131, 2955 |
| PspPI | GGNCC | 5 cut(s) | 815, 1316, 1705, 3863, 3905 |
| PstI | CTGCAG | 2 cut(s) | 3534, 3630 |
| PstNI | CAGNNNCTG | 4 cut(s) | 581, 1025, 1937, 3746 |
| PsuI | RGATCY | 2 cut(s) | 140, 2966 |
| PvuII | CAGCTG | 1 cut(s) | 3788 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1125, 1127, 1258 |
| SalI | GTCGAC | 1 cut(s) | 58 |
| SapI | GCTCTTC | 1 cut(s) | 1593 |
| Sau96I | GGNCC | 5 cut(s) | 815, 1316, 1705, 3863, 3905 |
| SchI | GAGTC | 8 cut(s) | 38, 55, 760, 2114, 2216, 2987, 3404, 3413 |
| ScrFI | CCNGG | 8 cut(s) | 492, 576, 1233, 2012, 2754, 2964, 3364, 3942 |
| SduI | GDGCHC | 5 cut(s) | 700, 964, 1928, 2490, 3238 |
| SexAI | ACCWGGT | 1 cut(s) | 574 |
| SfcI | CTRYAG | 2 cut(s) | 3530, 3626 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3874 |
| SinI | GGWCC | 2 cut(s) | 815, 3905 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1125, 1127, 1258 |
| SmlI | CTYRAG | 2 cut(s) | 1481, 3686 |
| SmoI | CTYRAG | 2 cut(s) | 1481, 3686 |
| SpeI | ACTAGT | 1 cut(s) | 428 |
| SphI | GCATGC | 1 cut(s) | 548 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspI | AATATT | 4 cut(s) | 1375, 1591, 2242, 3064 |
| StyD4I | CCNGG | 8 cut(s) | 490, 574, 1231, 2010, 2752, 2962, 3362, 3940 |
| StyI | CCWWGG | 2 cut(s) | 3318, 3468 |
| TaaI | ACNGT | 6 cut(s) | 727, 1363, 1712, 2301, 2825, 3350 |
| TaiI | ACGT | 3 cut(s) | 723, 2432, 2655 |
| TaqI | TCGA | 6 cut(s) | 24, 59, 80, 325, 1716, 2426 |
| TatI | WGTACW | 7 cut(s) | 497, 848, 1691, 1829, 3073, 3823, 3917 |
| TauI | GCSGC | 2 cut(s) | 1321, 1430 |
| TseFI | GTSAC | 3 cut(s) | 721, 1033, 1345 |
| TseI | GCWGC | 9 cut(s) | 265, 1760, 2554, 3302, 3392, 3558, 3628, 3773, 3785 |
| Tsp45I | GTSAC | 3 cut(s) | 721, 1033, 1345 |
| TspGWI | ACGGA | 3 cut(s) | 607, 1393, 3898 |
| Vha464I | CTTAAG | 1 cut(s) | 3686 |
| VpaK11BI | GGWCC | 2 cut(s) | 815, 3905 |
| VspI | ATTAAT | 2 cut(s) | 1377, 3603 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3858 |
| XapI | RAATTY | 9 cut(s) | 248, 660, 1266, 1625, 2609, 2666, 3089, 3798, 3829 |
| XbaI | TCTAGA | 1 cut(s) | 1796 |
| XceI | RCATGY | 4 cut(s) | 548, 1469, 1862, 3462 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 868, 1991 |
| XmiI | GTMKAC | 1 cut(s) | 59 |
| XmnI | GAANNNNTTC | 4 cut(s) | 476, 2164, 2374, 3342 |
| ZraI | GACGTC | 1 cut(s) | 2430 |
| Zsp2I | ATGCAT | 1 cut(s) | 1072 |