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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60150 AT5G60150 |
| fragaria_vesca | FvH4_3g33790 FvH4_3g33790 |
| malus_domestica | MD03G1109500.v1.1 MD03G1109700.v1.1 MD11G1122700.v1.1 |
| prunus_persica | Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 Prupe.6G092200_v2.0.a1 |
| pyrus_communis | pycom03g08930 pycom11g10390 |
| rosa_chinensis | RchiOBHm_Chr5g0061351 RchiOBHm_Chr5g0061361 |
| rosa_laevigata | RLG00000035457 RLG00000035459 RLG00000035469 |
| rosa_multiflora | Rmu_co8244331.1_g000001 Rmu_sc0000338.1_g000014 Rmu_sc0000689.1_g000017 Rmu_sc0033319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019320 Rroxscaffold_1G00019330 Rroxscaffold_1G00019380 |
| rosa_rugosa | Rorug05G0339600 |
| rosa_samantha | Rh5AG401900 Rh5BG414000 Rh5CG438500 Rh5DG428600 |
| rosa_wichuraiana | Rw5G037830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2219 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| AatII | GACGTC | 1 cut(s) | 15 |
| Acc36I | ACCTGC | 3 cut(s) | 1273, 2219, 3848 |
| Acc65I | GGTACC | 1 cut(s) | 3836 |
| AccB1I | GGYRCC | 2 cut(s) | 2654, 3836 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3940 |
| AccII | CGCG | 1 cut(s) | 1622 |
| AciI | CCGC | 5 cut(s) | 278, 599, 607, 1106, 1481 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AcoI | YGGCCR | 4 cut(s) | 600, 954, 1072, 1156 |
| AcvI | CACGTG | 1 cut(s) | 3345 |
| AcyI | GRCGYC | 1 cut(s) | 12 |
| AfeI | AGCGCT | 1 cut(s) | 1128 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 334, 1055, 1139, 1223, 1286, 2362, 3484, 3940, 5069 |
| AflIII | ACRYGT | 4 cut(s) | 2359, 3342, 3344, 3481 |
| AgeI | ACCGGT | 1 cut(s) | 754 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4006 |
| AjnI | CCWGG | 7 cut(s) | 63, 589, 2535, 3717, 3996, 4302, 4315 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 547, 579, 1369, 1401 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2517, 2549 |
| Alw21I | GWGCWC | 3 cut(s) | 2432, 3554, 3614 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 596, 2090, 3272, 3962 |
| Aor51HI | AGCGCT | 1 cut(s) | 1128 |
| AoxI | GGCC | 8 cut(s) | 600, 675, 695, 878, 954, 1072, 1156, 1478 |
| AseI | ATTAAT | 3 cut(s) | 2703, 4311, 4797 |
| AsiGI | ACCGGT | 1 cut(s) | 754 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 2683, 3871, 4380, 4551 |
| Asp718I | GGTACC | 1 cut(s) | 3836 |
| AspLEI | GCGC | 3 cut(s) | 589, 1129, 1624 |
| AspS9I | GGNCC | 8 cut(s) | 878, 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| AsuC2I | CCSGG | 3 cut(s) | 506, 1174, 5084 |
| AsuII | TTCGAA | 1 cut(s) | 760 |
| AvaII | GGWCC | 7 cut(s) | 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4283, 4316 |
| BalI | TGGCCA | 2 cut(s) | 956, 1074 |
| BamHI | GGATCC | 2 cut(s) | 1793, 2954 |
| BanI | GGYRCC | 2 cut(s) | 2654, 3836 |
| BanII | GRGCYC | 1 cut(s) | 4140 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4926, 4958 |
| BbrPI | CACGTG | 1 cut(s) | 3345 |
| BbsI | GAAGAC | 6 cut(s) | 45, 444, 1412, 1734, 1947, 3129 |
| Bbv12I | GWGCWC | 3 cut(s) | 2432, 3554, 3614 |
| BceAI | ACGGC | 1 cut(s) | 1143 |
| BciT130I | CCWGG | 7 cut(s) | 65, 591, 2537, 3719, 3998, 4304, 4317 |
| BciVI | GTATCC | 1 cut(s) | 302 |
| BclI | TGATCA | 4 cut(s) | 1512, 2041, 2056, 3223 |
| BcnI | CCSGG | 3 cut(s) | 506, 1174, 5084 |
| BfoI | RGCGCY | 1 cut(s) | 1130 |
| BfuAI | ACCTGC | 3 cut(s) | 1273, 2219, 3848 |
| BfuI | GTATCC | 1 cut(s) | 302 |
| BglII | AGATCT | 1 cut(s) | 466 |
| BlpI | GCTNAGC | 2 cut(s) | 3273, 4589 |
| Bme18I | GGWCC | 7 cut(s) | 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4006 |
| BmgT120I | GGNCC | 8 cut(s) | 878, 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| BmrI | ACTGGG | 1 cut(s) | 885 |
| BmuI | ACTGGG | 1 cut(s) | 885 |
| BpiI | GAAGAC | 6 cut(s) | 45, 444, 1412, 1734, 1947, 3129 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1016, 1048, 4679, 4711 |
| BpmI | CTGGAG | 5 cut(s) | 257, 1173, 2424, 3546, 3606 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2426, 3548 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3273, 4589 |
| Bpu14I | TTCGAA | 1 cut(s) | 760 |
| BpuEI | CTTGAG | 3 cut(s) | 1540, 1654, 2701 |
| BpuMI | CCSGG | 3 cut(s) | 506, 1174, 5084 |
| BsaAI | YACGTR | 2 cut(s) | 1304, 3345 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2139, 3321 |
| BsaHI | GRCGYC | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 7 cut(s) | 1492, 2175, 3357, 3717, 4140, 5075, 5082 |
| BsaWI | WCCGGW | 1 cut(s) | 754 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 334, 1055, 1139, 1223, 1286, 2362, 3484, 3940, 5069 |
| Bse118I | RCCGGY | 1 cut(s) | 754 |
| Bse3DI | GCAATG | 2 cut(s) | 450, 4458 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2139, 3321 |
| BseBI | CCWGG | 7 cut(s) | 65, 591, 2537, 3719, 3998, 4304, 4317 |
| BseDI | CCNNGG | 7 cut(s) | 1492, 2175, 3357, 3717, 4140, 5075, 5082 |
| BseGI | GGATG | 8 cut(s) | 1347, 2403, 2578, 3532, 3760, 4076, 4861, 4975 |
| BseJI | GATNNNNATC | 2 cut(s) | 2139, 3321 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 334, 1055, 1139, 1223, 1286, 2362, 3484, 3940, 5069 |
| BseMI | GCAATG | 2 cut(s) | 450, 4458 |
| BseRI | GAGGAG | 1 cut(s) | 670 |
| BseYI | CCCAGC | 2 cut(s) | 2601, 3783 |
| BsgI | GTGCAG | 1 cut(s) | 4968 |
| Bsh1236I | CGCG | 1 cut(s) | 1622 |
| BshFI | GGCC | 8 cut(s) | 602, 677, 697, 880, 956, 1074, 1158, 1480 |
| BshNI | GGYRCC | 2 cut(s) | 2654, 3836 |
| BshTI | ACCGGT | 1 cut(s) | 754 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2432, 3554, 3614 |
| BsiSI | CCGG | 5 cut(s) | 506, 755, 1174, 4998, 5084 |
| BslFI | GGGAC | 5 cut(s) | 3916, 4165, 4178, 5065, 5132 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 334, 1055, 1139, 1223, 1286, 2362, 3484, 3940, 5069 |
| BsmFI | GGGAC | 5 cut(s) | 3916, 4165, 4178, 5065, 5132 |
| BsmI | GAATGC | 2 cut(s) | 1713, 2874 |
| BsnI | GGCC | 8 cut(s) | 602, 677, 697, 880, 956, 1074, 1158, 1480 |
| Bsp119I | TTCGAA | 1 cut(s) | 760 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2432, 3554, 3614, 4140 |
| Bsp1407I | TGTACA | 2 cut(s) | 5032, 5126 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3273, 4589 |
| Bsp19I | CCATGG | 1 cut(s) | 5075 |
| BspACI | CCGC | 5 cut(s) | 278, 599, 607, 1106, 1481 |
| BspANI | GGCC | 8 cut(s) | 602, 677, 697, 880, 956, 1074, 1158, 1480 |
| BspFNI | CGCG | 1 cut(s) | 1622 |
| BspHI | TCATGA | 5 cut(s) | 1468, 1723, 2884, 4384, 4576 |
| BspMI | ACCTGC | 3 cut(s) | 1273, 2219, 3848 |
| BspT104I | TTCGAA | 1 cut(s) | 760 |
| BspT107I | GGYRCC | 2 cut(s) | 2654, 3836 |
| BsrDI | GCAATG | 2 cut(s) | 450, 4458 |
| BsrFI | RCCGGY | 1 cut(s) | 754 |
| BsrGI | TGTACA | 2 cut(s) | 5032, 5126 |
| BssAI | RCCGGY | 1 cut(s) | 754 |
| BssECI | CCNNGG | 7 cut(s) | 1492, 2175, 3357, 3717, 4140, 5075, 5082 |
| BssNI | GRCGYC | 1 cut(s) | 12 |
| BssT1I | CCWWGG | 5 cut(s) | 1492, 2175, 3357, 4140, 5075 |
| Bst2UI | CCWGG | 7 cut(s) | 65, 591, 2537, 3719, 3998, 4304, 4317 |
| Bst6I | CTCTTC | 8 cut(s) | 284, 372, 688, 1281, 1492, 1995, 3177, 4803 |
| BstACI | GRCGYC | 1 cut(s) | 12 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 660, 896 |
| BstAUI | TGTACA | 2 cut(s) | 5032, 5126 |
| BstBAI | YACGTR | 2 cut(s) | 1304, 3345 |
| BstBI | TTCGAA | 1 cut(s) | 760 |
| BstC8I | GCNNGC | 9 cut(s) | 131, 699, 939, 958, 2382, 2659, 3504, 4232, 4344 |
| BstDSI | CCRYGG | 1 cut(s) | 5075 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 5067 |
| BstF5I | GGATG | 8 cut(s) | 1347, 2403, 2578, 3532, 3760, 4076, 4861, 4975 |
| BstFNI | CGCG | 1 cut(s) | 1622 |
| BstH2I | RGCGCY | 1 cut(s) | 1130 |
| BstHHI | GCGC | 3 cut(s) | 589, 1129, 1624 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 613, 651, 660, 848, 896, 1193, 4352, 4991 |
| BstNI | CCWGG | 7 cut(s) | 65, 591, 2537, 3719, 3998, 4304, 4317 |
| BstNSI | RCATGY | 2 cut(s) | 2363, 3485 |
| BstUI | CGCG | 1 cut(s) | 1622 |
| BstV2I | GAAGAC | 6 cut(s) | 45, 444, 1412, 1734, 1947, 3129 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 160 |
| BsuI | GTATCC | 1 cut(s) | 302 |
| BsuRI | GGCC | 8 cut(s) | 602, 677, 697, 880, 956, 1074, 1158, 1480 |
| BtgI | CCRYGG | 1 cut(s) | 5075 |
| BtsCI | GGATG | 8 cut(s) | 1347, 2403, 2578, 3532, 3760, 4076, 4861, 4975 |
| BtsI | GCAGTG | 6 cut(s) | 661, 1890, 2059, 3072, 4518, 4834 |
| BveI | ACCTGC | 3 cut(s) | 1273, 2219, 3848 |
| Cac8I | GCNNGC | 9 cut(s) | 131, 699, 939, 958, 2382, 2659, 3504, 4232, 4344 |
| CaiI | CAGNNNCTG | 4 cut(s) | 596, 2090, 3272, 3962 |
| CciI | TCATGA | 5 cut(s) | 1468, 1723, 2884, 4384, 4576 |
| CfoI | GCGC | 3 cut(s) | 589, 1129, 1624 |
| Cfr10I | RCCGGY | 1 cut(s) | 754 |
| Cfr13I | GGNCC | 8 cut(s) | 878, 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| CspAI | ACCGGT | 1 cut(s) | 754 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 622, 657 |
| DraI | TTTAAA | 4 cut(s) | 825, 2101, 2305, 3168 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4006 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| EaeI | YGGCCR | 4 cut(s) | 600, 954, 1072, 1156 |
| Eam1104I | CTCTTC | 8 cut(s) | 284, 372, 688, 1281, 1492, 1995, 3177, 4803 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4006 |
| EarI | CTCTTC | 8 cut(s) | 284, 372, 688, 1281, 1492, 1995, 3177, 4803 |
| Eco130I | CCWWGG | 5 cut(s) | 1492, 2175, 3357, 4140, 5075 |
| Eco147I | AGGCCT | 1 cut(s) | 697 |
| Eco24I | GRGCYC | 1 cut(s) | 4140 |
| Eco32I | GATATC | 2 cut(s) | 631, 2200 |
| Eco47I | GGWCC | 7 cut(s) | 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| Eco47III | AGCGCT | 1 cut(s) | 1128 |
| Eco72I | CACGTG | 1 cut(s) | 3345 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 5067 |
| EcoRI | GAATTC | 2 cut(s) | 370, 4734 |
| EcoRII | CCWGG | 7 cut(s) | 63, 589, 2535, 3717, 3996, 4302, 4315 |
| EcoRV | GATATC | 2 cut(s) | 631, 2200 |
| EcoT14I | CCWWGG | 5 cut(s) | 1492, 2175, 3357, 4140, 5075 |
| EcoT22I | ATGCAT | 4 cut(s) | 1066, 1150, 1427, 4458 |
| EcoT38I | GRGCYC | 1 cut(s) | 4140 |
| ErhI | CCWWGG | 5 cut(s) | 1492, 2175, 3357, 4140, 5075 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 316, 348, 1823, 1855 |
| FaqI | GGGAC | 5 cut(s) | 3916, 4165, 4178, 5065, 5132 |
| FauNDI | CATATG | 4 cut(s) | 1069, 1153, 1237, 3327 |
| FbaI | TGATCA | 4 cut(s) | 1512, 2041, 2056, 3223 |
| FokI | GGATG | 8 cut(s) | 1354, 2410, 2585, 3539, 3767, 4063, 4848, 4982 |
| FriOI | GRGCYC | 1 cut(s) | 4140 |
| GlaI | GCGC | 3 cut(s) | 588, 1128, 1623 |
| GsaI | CCCAGC | 2 cut(s) | 2605, 3787 |
| GsuI | CTGGAG | 5 cut(s) | 257, 1173, 2424, 3546, 3606 |
| HaeII | RGCGCY | 1 cut(s) | 1130 |
| HaeIII | GGCC | 8 cut(s) | 602, 677, 697, 880, 956, 1074, 1158, 1480 |
| HapII | CCGG | 5 cut(s) | 506, 755, 1174, 4998, 5084 |
| HhaI | GCGC | 3 cut(s) | 589, 1129, 1624 |
| Hin1I | GRCGYC | 1 cut(s) | 12 |
| Hin6I | GCGC | 3 cut(s) | 587, 1127, 1622 |
| HinP1I | GCGC | 3 cut(s) | 587, 1127, 1622 |
| HincII | GTYRAC | 5 cut(s) | 2422, 2453, 3604, 3635, 4659 |
| HindII | GTYRAC | 5 cut(s) | 2422, 2453, 3604, 3635, 4659 |
| HindIII | AAGCTT | 2 cut(s) | 1380, 4940 |
| HpaII | CCGG | 5 cut(s) | 506, 755, 1174, 4998, 5084 |
| Hpy99I | CGWCG | 3 cut(s) | 14, 113, 116 |
| HpyCH4IV | ACGT | 6 cut(s) | 12, 75, 1303, 3344, 4128, 5145 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 613, 651, 660, 848, 896, 1193, 4352, 4991 |
| HpySE526I | ACGT | 6 cut(s) | 12, 75, 1303, 3344, 4128, 5145 |
| Hsp92I | GRCGYC | 1 cut(s) | 12 |
| HspAI | GCGC | 3 cut(s) | 587, 1127, 1622 |
| KpnI | GGTACC | 1 cut(s) | 3840 |
| Ksp22I | TGATCA | 4 cut(s) | 1512, 2041, 2056, 3223 |
| LmnI | GCTCC | 5 cut(s) | 1192, 1317, 2443, 3565, 3625 |
| MaeII | ACGT | 6 cut(s) | 12, 75, 1303, 3344, 4128, 5145 |
| MaeIII | GTNAC | 9 cut(s) | 86, 1299, 1627, 1861, 2788, 3043, 3989, 4200, 4513 |
| MfeI | CAATTG | 3 cut(s) | 56, 1805, 2966 |
| MhlI | GDGCHC | 4 cut(s) | 2432, 3554, 3614, 4140 |
| MlsI | TGGCCA | 2 cut(s) | 956, 1074 |
| MluNI | TGGCCA | 2 cut(s) | 956, 1074 |
| MlyI | GAGTC | 4 cut(s) | 2288, 3938, 3995, 4622 |
| MmeI | TCCRAC | 6 cut(s) | 33, 163, 2500, 2550, 3682, 3732 |
| Mox20I | TGGCCA | 2 cut(s) | 956, 1074 |
| Mph1103I | ATGCAT | 4 cut(s) | 1066, 1150, 1427, 4458 |
| MroXI | GAANNNNTTC | 4 cut(s) | 2683, 3871, 4380, 4551 |
| MscI | TGGCCA | 2 cut(s) | 956, 1074 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1287, 2556, 2795, 3738 |
| Msp20I | TGGCCA | 2 cut(s) | 956, 1074 |
| MspI | CCGG | 5 cut(s) | 506, 755, 1174, 4998, 5084 |
| MssI | GTTTAAAC | 1 cut(s) | 2101 |
| MunI | CAATTG | 3 cut(s) | 56, 1805, 2966 |
| Mva1269I | GAATGC | 2 cut(s) | 1713, 2874 |
| MvaI | CCWGG | 7 cut(s) | 65, 591, 2537, 3719, 3998, 4304, 4317 |
| MvnI | CGCG | 1 cut(s) | 1622 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 613, 651, 660, 848, 896, 1193, 4352, 4991 |
| NciI | CCSGG | 3 cut(s) | 506, 1174, 5084 |
| NcoI | CCATGG | 1 cut(s) | 5075 |
| NdeI | CATATG | 4 cut(s) | 1069, 1153, 1237, 3327 |
| NmuCI | GTSAC | 3 cut(s) | 1299, 2788, 4513 |
| NsiI | ATGCAT | 4 cut(s) | 1066, 1150, 1427, 4458 |
| NspI | RCATGY | 2 cut(s) | 2363, 3485 |
| NspV | TTCGAA | 1 cut(s) | 760 |
| PagI | TCATGA | 5 cut(s) | 1468, 1723, 2884, 4384, 4576 |
| PaqCI | CACCTGC | 1 cut(s) | 2219 |
| PceI | AGGCCT | 1 cut(s) | 697 |
| PciI | ACATGT | 2 cut(s) | 2359, 3481 |
| PctI | GAATGC | 2 cut(s) | 1713, 2874 |
| PdmI | GAANNNNTTC | 4 cut(s) | 2683, 3871, 4380, 4551 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3940 |
| PfoI | TCCNGGA | 5 cut(s) | 63, 504, 1172, 2535, 4315 |
| PinAI | ACCGGT | 1 cut(s) | 754 |
| PleI | GAGTC | 4 cut(s) | 2288, 3937, 3995, 4621 |
| PmaCI | CACGTG | 1 cut(s) | 3345 |
| PmeI | GTTTAAAC | 1 cut(s) | 2101 |
| PmlI | CACGTG | 1 cut(s) | 3345 |
| PpsI | GAGTC | 4 cut(s) | 2288, 3937, 3995, 4621 |
| Ppu21I | YACGTR | 2 cut(s) | 1304, 3345 |
| PscI | ACATGT | 2 cut(s) | 2359, 3481 |
| PshBI | ATTAAT | 3 cut(s) | 2703, 4311, 4797 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp6I | CCWGG | 7 cut(s) | 63, 589, 2535, 3717, 3996, 4302, 4315 |
| PspCI | CACGTG | 1 cut(s) | 3345 |
| PspFI | CCCAGC | 2 cut(s) | 2601, 3783 |
| PspGI | CCWGG | 7 cut(s) | 63, 589, 2535, 3717, 3996, 4302, 4315 |
| PspPI | GGNCC | 8 cut(s) | 878, 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1641, 1673, 2802, 2834 |
| PstNI | CAGNNNCTG | 4 cut(s) | 596, 2090, 3272, 3962 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1287, 2556, 2795, 3738 |
| Sau96I | GGNCC | 8 cut(s) | 878, 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| SbfI | CCTGCAGG | 1 cut(s) | 853 |
| SchI | GAGTC | 4 cut(s) | 2288, 3938, 3995, 4622 |
| SdaI | CCTGCAGG | 1 cut(s) | 853 |
| SduI | GDGCHC | 4 cut(s) | 2432, 3554, 3614, 4140 |
| SfuI | TTCGAA | 1 cut(s) | 760 |
| SinI | GGWCC | 7 cut(s) | 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1287, 2556, 2795, 3738 |
| SmlI | CTYRAG | 3 cut(s) | 1555, 1669, 2716 |
| SmoI | CTYRAG | 3 cut(s) | 1555, 1669, 2716 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 853 |
| SseBI | AGGCCT | 1 cut(s) | 697 |
| SsiI | CCGC | 5 cut(s) | 278, 599, 607, 1106, 1481 |
| SspI | AATATT | 1 cut(s) | 2701 |
| StuI | AGGCCT | 1 cut(s) | 697 |
| StyI | CCWWGG | 5 cut(s) | 1492, 2175, 3357, 4140, 5075 |
| TaiI | ACGT | 6 cut(s) | 15, 78, 1306, 3347, 4131, 5148 |
| TaqI | TCGA | 5 cut(s) | 80, 340, 667, 760, 1023 |
| TaqII | GACCGA | 1 cut(s) | 1214 |
| TatI | WGTACW | 3 cut(s) | 3004, 5032, 5126 |
| TauI | GCSGC | 3 cut(s) | 280, 602, 1483 |
| TseFI | GTSAC | 3 cut(s) | 1299, 2788, 4513 |
| Tsp45I | GTSAC | 3 cut(s) | 1299, 2788, 4513 |
| TspGWI | ACGGA | 2 cut(s) | 186, 1354 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3940 |
| VpaK11BI | GGWCC | 7 cut(s) | 2245, 3427, 4152, 4604, 5072, 5079, 5114 |
| VspI | ATTAAT | 3 cut(s) | 2703, 4311, 4797 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 5067 |
| XbaI | TCTAGA | 2 cut(s) | 469, 2297 |
| XceI | RCATGY | 2 cut(s) | 2363, 3485 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 160, 802, 949 |
| XmnI | GAANNNNTTC | 4 cut(s) | 2683, 3871, 4380, 4551 |
| ZraI | GACGTC | 1 cut(s) | 13 |
| Zsp2I | ATGCAT | 4 cut(s) | 1066, 1150, 1427, 4458 |