Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G65510 AT5G65510 AT5G65510 AT5G65510 |
| fragaria_vesca | FvH4_1g19530 |
| malus_domestica | MD01G1040700.v1.1 MD15G1310900.v1.1 |
| prunus_persica | Prupe.6G142500_v2.0.a1 Prupe.6G203000_v2.0.a1 |
| pyrus_communis | pycom01g06820 pycom15g27450 |
| rosa_chinensis | RchiOBHm_Chr2g0111031 RchiOBHm_Chr4g0405741 |
| rosa_laevigata | RLG00000012851 RLG00000017859 RLG00000020876 |
| rosa_multiflora | Rmu_co8195526.1_g000001 Rmu_sc0000041.1_g000014 Rmu_sc0003994.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00132730 Rroxscaffold_5G00366230 |
| rosa_rugosa | Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 |
| rosa_samantha | Rh2AG222800 Rh2AG222900 Rh2BG234800 Rh2CG226300 Rh2DG230600 Rh2DG230700 Rh2DG399700 Rh4BG037900 Rh4CG141400 Rh6BG125200 Rh6CG051000 Rh7CG223000 |
| rosa_wichuraiana | Rw2G017210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 790 |
| AciI | CCGC | 3 cut(s) | 179, 334, 975 |
| AclI | AACGTT | 1 cut(s) | 29 |
| AclWI | GGATC | 2 cut(s) | 317, 1344 |
| AcoI | YGGCCR | 1 cut(s) | 1051 |
| AcsI | RAATTY | 1 cut(s) | 883 |
| AcuI | CTGAAG | 1 cut(s) | 1365 |
| AcvI | CACGTG | 1 cut(s) | 469 |
| AcyI | GRCGYC | 1 cut(s) | 787 |
| AdeI | CACNNNGTG | 1 cut(s) | 472 |
| AfaI | GTAC | 2 cut(s) | 451, 797 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1223 |
| AjiI | CACGTC | 1 cut(s) | 329 |
| Alw26I | GTCTC | 5 cut(s) | 78, 281, 543, 898, 1432 |
| AlwI | GGATC | 2 cut(s) | 317, 1344 |
| Ama87I | CYCGRG | 2 cut(s) | 403, 895 |
| AoxI | GGCC | 2 cut(s) | 1051, 1478 |
| ApeKI | GCWGC | 9 cut(s) | 161, 164, 167, 827, 848, 1109, 1130, 1229, 1232 |
| ApoI | RAATTY | 1 cut(s) | 883 |
| AspLEI | GCGC | 1 cut(s) | 739 |
| AspS9I | GGNCC | 1 cut(s) | 407 |
| AsuHPI | GGTGA | 5 cut(s) | 33, 263, 323, 521, 697 |
| AvaI | CYCGRG | 2 cut(s) | 403, 895 |
| AvaII | GGWCC | 1 cut(s) | 407 |
| BbrPI | CACGTG | 1 cut(s) | 469 |
| BbvI | GCAGC | 9 cut(s) | 148, 151, 154, 839, 860, 1121, 1142, 1219, 1241 |
| BccI | CCATC | 1 cut(s) | 711 |
| BceAI | ACGGC | 2 cut(s) | 504, 1038 |
| BclI | TGATCA | 2 cut(s) | 67, 370 |
| BcoDI | GTCTC | 5 cut(s) | 78, 281, 543, 898, 1432 |
| BfaI | CTAG | 2 cut(s) | 542, 831 |
| BfmI | CTRYAG | 2 cut(s) | 757, 1218 |
| BglII | AGATCT | 1 cut(s) | 1072 |
| BisI | GCNGC | 9 cut(s) | 162, 165, 168, 828, 849, 1110, 1131, 1230, 1233 |
| BlsI | GCNGC | 9 cut(s) | 163, 166, 169, 829, 850, 1111, 1132, 1231, 1234 |
| Bme18I | GGWCC | 1 cut(s) | 407 |
| BmeT110I | CYCGRG | 2 cut(s) | 403, 895 |
| BmgBI | CACGTC | 1 cut(s) | 329 |
| BmgT120I | GGNCC | 1 cut(s) | 407 |
| BmiI | GGNNCC | 3 cut(s) | 6, 408, 1087 |
| BmrI | ACTGGG | 1 cut(s) | 871 |
| BmsI | GCATC | 3 cut(s) | 748, 962, 1027 |
| BmuI | ACTGGG | 1 cut(s) | 871 |
| BpmI | CTGGAG | 1 cut(s) | 445 |
| BpuEI | CTTGAG | 1 cut(s) | 935 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaAI | YACGTR | 1 cut(s) | 469 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| BsaHI | GRCGYC | 1 cut(s) | 787 |
| BsaI | GGTCTC | 3 cut(s) | 281, 898, 1432 |
| BsaJI | CCNNGG | 3 cut(s) | 247, 1081, 1332 |
| BsaWI | WCCGGW | 2 cut(s) | 524, 889 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 754, 784, 955, 985 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1223 |
| Bse1I | ACTGG | 4 cut(s) | 462, 727, 866, 1486 |
| Bse3DI | GCAATG | 1 cut(s) | 1125 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseDI | CCNNGG | 3 cut(s) | 247, 1081, 1332 |
| BseGI | GGATG | 1 cut(s) | 1280 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1223 |
| BseMI | GCAATG | 1 cut(s) | 1125 |
| BseMII | CTCAG | 4 cut(s) | 141, 230, 236, 1455 |
| BseNI | ACTGG | 4 cut(s) | 462, 727, 866, 1486 |
| BseRI | GAGGAG | 3 cut(s) | 543, 1002, 1239 |
| BseX3I | CGGCCG | 1 cut(s) | 1051 |
| BseXI | GCAGC | 9 cut(s) | 148, 151, 154, 839, 860, 1121, 1142, 1219, 1241 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1054 |
| BshFI | GGCC | 2 cut(s) | 1053, 1480 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiEI | CGRYCG | 1 cut(s) | 1054 |
| BsiHKCI | CYCGRG | 2 cut(s) | 403, 895 |
| BsiSI | CCGG | 2 cut(s) | 525, 890 |
| BslFI | GGGAC | 2 cut(s) | 420, 690 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1223 |
| BsmAI | GTCTC | 5 cut(s) | 78, 281, 543, 898, 1432 |
| BsmFI | GGGAC | 2 cut(s) | 420, 690 |
| BsmI | GAATGC | 1 cut(s) | 1365 |
| BsnI | GGCC | 2 cut(s) | 1053, 1480 |
| Bso31I | GGTCTC | 3 cut(s) | 281, 898, 1432 |
| BsoBI | CYCGRG | 2 cut(s) | 403, 895 |
| Bsp143I | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| BspACI | CCGC | 3 cut(s) | 179, 334, 975 |
| BspANI | GGCC | 2 cut(s) | 1053, 1480 |
| BspCNI | CTCAG | 4 cut(s) | 142, 229, 235, 1456 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspHI | TCATGA | 1 cut(s) | 1200 |
| BspLI | GGNNCC | 3 cut(s) | 6, 408, 1087 |
| BspPI | GGATC | 2 cut(s) | 317, 1344 |
| BspTNI | GGTCTC | 3 cut(s) | 281, 898, 1432 |
| BsrDI | GCAATG | 1 cut(s) | 1125 |
| BsrI | ACTGG | 4 cut(s) | 462, 727, 866, 1486 |
| BssECI | CCNNGG | 3 cut(s) | 247, 1081, 1332 |
| BssMI | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| BssNI | GRCGYC | 1 cut(s) | 787 |
| Bst4CI | ACNGT | 5 cut(s) | 340, 509, 605, 622, 1311 |
| Bst6I | CTCTTC | 4 cut(s) | 88, 304, 1095, 1330 |
| BstACI | GRCGYC | 1 cut(s) | 787 |
| BstBAI | YACGTR | 1 cut(s) | 469 |
| BstC8I | GCNNGC | 2 cut(s) | 1037, 1041 |
| BstDEI | CTNAG | 7 cut(s) | 150, 216, 222, 627, 799, 959, 1464 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| BstF5I | GGATG | 1 cut(s) | 1280 |
| BstHHI | GCGC | 1 cut(s) | 739 |
| BstKTI | GATC | 7 cut(s) | 70, 211, 325, 373, 565, 1075, 1339 |
| BstMAI | GTCTC | 5 cut(s) | 78, 281, 543, 898, 1432 |
| BstMBI | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| BstMCI | CGRYCG | 1 cut(s) | 1054 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 833, 1115 |
| BstSFI | CTRYAG | 2 cut(s) | 757, 1218 |
| BstV1I | GCAGC | 9 cut(s) | 148, 151, 154, 839, 860, 1121, 1142, 1219, 1241 |
| BstX2I | RGATCY | 1 cut(s) | 1072 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 469 |
| BstYI | RGATCY | 1 cut(s) | 1072 |
| BstZI | CGGCCG | 1 cut(s) | 1051 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuRI | GGCC | 2 cut(s) | 1053, 1480 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtrI | CACGTC | 1 cut(s) | 329 |
| BtsCI | GGATG | 1 cut(s) | 1280 |
| Cac8I | GCNNGC | 2 cut(s) | 1037, 1041 |
| CciI | TCATGA | 1 cut(s) | 1200 |
| CfoI | GCGC | 1 cut(s) | 739 |
| Cfr13I | GGNCC | 1 cut(s) | 407 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| Csp6I | GTAC | 2 cut(s) | 450, 796 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 427, 462 |
| CviAII | CATG | 3 cut(s) | 931, 1201, 1359 |
| CviQI | GTAC | 2 cut(s) | 450, 796 |
| DdeI | CTNAG | 7 cut(s) | 150, 216, 222, 627, 799, 959, 1464 |
| DpnI | GATC | 7 cut(s) | 69, 210, 324, 372, 564, 1074, 1338 |
| DpnII | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| DraI | TTTAAA | 1 cut(s) | 855 |
| DraIII | CACNNNGTG | 1 cut(s) | 472 |
| EaeI | YGGCCR | 1 cut(s) | 1051 |
| EagI | CGGCCG | 1 cut(s) | 1051 |
| Eam1104I | CTCTTC | 4 cut(s) | 88, 304, 1095, 1330 |
| EarI | CTCTTC | 4 cut(s) | 88, 304, 1095, 1330 |
| EciI | GGCGGA | 1 cut(s) | 194 |
| EclXI | CGGCCG | 1 cut(s) | 1051 |
| Eco31I | GGTCTC | 3 cut(s) | 281, 898, 1432 |
| Eco47I | GGWCC | 1 cut(s) | 407 |
| Eco52I | CGGCCG | 1 cut(s) | 1051 |
| Eco57I | CTGAAG | 1 cut(s) | 1365 |
| Eco72I | CACGTG | 1 cut(s) | 469 |
| Eco88I | CYCGRG | 2 cut(s) | 403, 895 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| FaeI | CATG | 3 cut(s) | 934, 1204, 1362 |
| FaqI | GGGAC | 2 cut(s) | 420, 690 |
| FatI | CATG | 3 cut(s) | 930, 1200, 1358 |
| FbaI | TGATCA | 2 cut(s) | 67, 370 |
| Fnu4HI | GCNGC | 9 cut(s) | 162, 165, 168, 828, 849, 1110, 1131, 1230, 1233 |
| FokI | GGATG | 1 cut(s) | 1267 |
| Fsp4HI | GCNGC | 9 cut(s) | 162, 165, 168, 828, 849, 1110, 1131, 1230, 1233 |
| FspBI | CTAG | 2 cut(s) | 542, 831 |
| GlaI | GCGC | 1 cut(s) | 738 |
| GluI | GCNGC | 9 cut(s) | 162, 165, 168, 828, 849, 1110, 1131, 1230, 1233 |
| GsuI | CTGGAG | 1 cut(s) | 445 |
| HaeIII | GGCC | 2 cut(s) | 1053, 1480 |
| HapII | CCGG | 2 cut(s) | 525, 890 |
| HhaI | GCGC | 1 cut(s) | 739 |
| Hin1I | GRCGYC | 1 cut(s) | 787 |
| Hin1II | CATG | 3 cut(s) | 934, 1204, 1362 |
| Hin6I | GCGC | 1 cut(s) | 737 |
| HinP1I | GCGC | 1 cut(s) | 737 |
| HincII | GTYRAC | 1 cut(s) | 550 |
| HindII | GTYRAC | 1 cut(s) | 550 |
| HpaI | GTTAAC | 1 cut(s) | 550 |
| HpaII | CCGG | 2 cut(s) | 525, 890 |
| HphI | GGTGA | 5 cut(s) | 33, 263, 323, 521, 697 |
| Hpy166II | GTNNAC | 2 cut(s) | 550, 796 |
| Hpy188III | TCNNGA | 6 cut(s) | 391, 405, 895, 984, 1201, 1262 |
| Hpy8I | GTNNAC | 2 cut(s) | 550, 796 |
| Hpy99I | CGWCG | 2 cut(s) | 98, 490 |
| HpyAV | CCTTC | 5 cut(s) | 341, 625, 761, 1281, 1389 |
| HpyCH4III | ACNGT | 5 cut(s) | 340, 509, 605, 622, 1311 |
| HpyCH4IV | ACGT | 4 cut(s) | 29, 328, 468, 787 |
| HpyCH4V | TGCA | 4 cut(s) | 516, 953, 1094, 1130 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 833, 1115 |
| HpyF3I | CTNAG | 7 cut(s) | 150, 216, 222, 627, 799, 959, 1464 |
| HpySE526I | ACGT | 4 cut(s) | 29, 328, 468, 787 |
| Hsp92I | GRCGYC | 1 cut(s) | 787 |
| Hsp92II | CATG | 3 cut(s) | 934, 1204, 1362 |
| HspAI | GCGC | 1 cut(s) | 737 |
| Ksp22I | TGATCA | 2 cut(s) | 67, 370 |
| KspAI | GTTAAC | 1 cut(s) | 550 |
| Kzo9I | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| LmnI | GCTCC | 4 cut(s) | 10, 989, 1226, 1453 |
| Lsp1109I | GCAGC | 9 cut(s) | 148, 151, 154, 839, 860, 1121, 1142, 1219, 1241 |
| LweI | GCATC | 3 cut(s) | 748, 962, 1027 |
| MaeI | CTAG | 2 cut(s) | 542, 831 |
| MaeII | ACGT | 4 cut(s) | 29, 328, 468, 787 |
| MalI | GATC | 7 cut(s) | 69, 210, 324, 372, 564, 1074, 1338 |
| MboI | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| MflI | RGATCY | 1 cut(s) | 1072 |
| MluCI | AATT | 4 cut(s) | 19, 690, 883, 1440 |
| MlyI | GAGTC | 6 cut(s) | 214, 290, 419, 485, 711, 1427 |
| MmeI | TCCRAC | 2 cut(s) | 462, 1324 |
| MseI | TTAA | 4 cut(s) | 26, 504, 549, 854 |
| MspA1I | CMGCKG | 2 cut(s) | 756, 1232 |
| MspI | CCGG | 2 cut(s) | 525, 890 |
| Mva1269I | GAATGC | 1 cut(s) | 1365 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 833, 1115 |
| NdeII | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| NlaIII | CATG | 3 cut(s) | 934, 1204, 1362 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 408, 1087 |
| NmuCI | GTSAC | 5 cut(s) | 39, 329, 464, 703, 1009 |
| PaeR7I | CTCGAG | 1 cut(s) | 895 |
| PagI | TCATGA | 1 cut(s) | 1200 |
| PctI | GAATGC | 1 cut(s) | 1365 |
| PfeI | GAWTC | 9 cut(s) | 98, 182, 226, 254, 647, 925, 1047, 1149, 1265 |
| PkrI | GCNGC | 9 cut(s) | 163, 166, 169, 829, 850, 1111, 1132, 1231, 1234 |
| PleI | GAGTC | 6 cut(s) | 214, 290, 419, 484, 710, 1427 |
| PmaCI | CACGTG | 1 cut(s) | 469 |
| PmlI | CACGTG | 1 cut(s) | 469 |
| PpsI | GAGTC | 6 cut(s) | 214, 290, 419, 484, 710, 1427 |
| Ppu21I | YACGTR | 1 cut(s) | 469 |
| Psp1406I | AACGTT | 1 cut(s) | 29 |
| PspCI | CACGTG | 1 cut(s) | 469 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 408, 1087 |
| PspPI | GGNCC | 1 cut(s) | 407 |
| PsuI | RGATCY | 1 cut(s) | 1072 |
| PvuII | CAGCTG | 2 cut(s) | 756, 1232 |
| RsaI | GTAC | 2 cut(s) | 451, 797 |
| RsaNI | GTAC | 2 cut(s) | 450, 796 |
| SaqAI | TTAA | 4 cut(s) | 26, 504, 549, 854 |
| SatI | GCNGC | 9 cut(s) | 162, 165, 168, 828, 849, 1110, 1131, 1230, 1233 |
| Sau3AI | GATC | 7 cut(s) | 67, 208, 322, 370, 562, 1072, 1336 |
| Sau96I | GGNCC | 1 cut(s) | 407 |
| SchI | GAGTC | 6 cut(s) | 214, 290, 419, 485, 711, 1427 |
| SfaNI | GCATC | 3 cut(s) | 748, 962, 1027 |
| SfcI | CTRYAG | 2 cut(s) | 757, 1218 |
| Sfr274I | CTCGAG | 1 cut(s) | 895 |
| SinI | GGWCC | 1 cut(s) | 407 |
| SlaI | CTCGAG | 1 cut(s) | 895 |
| SmlI | CTYRAG | 2 cut(s) | 895, 914 |
| SmoI | CTYRAG | 2 cut(s) | 895, 914 |
| Sse9I | AATT | 4 cut(s) | 19, 690, 883, 1440 |
| SsiI | CCGC | 3 cut(s) | 179, 334, 975 |
| SspMI | CTAG | 2 cut(s) | 542, 831 |
| TaaI | ACNGT | 5 cut(s) | 340, 509, 605, 622, 1311 |
| TaiI | ACGT | 4 cut(s) | 32, 331, 471, 790 |
| TaqI | TCGA | 6 cut(s) | 120, 207, 420, 666, 896, 983 |
| TasI | AATT | 4 cut(s) | 19, 690, 883, 1440 |
| TatI | WGTACW | 1 cut(s) | 795 |
| TfiI | GAWTC | 9 cut(s) | 98, 182, 226, 254, 647, 925, 1047, 1149, 1265 |
| Tru1I | TTAA | 4 cut(s) | 26, 504, 549, 854 |
| Tru9I | TTAA | 4 cut(s) | 26, 504, 549, 854 |
| TseFI | GTSAC | 5 cut(s) | 39, 329, 464, 703, 1009 |
| TseI | GCWGC | 9 cut(s) | 161, 164, 167, 827, 848, 1109, 1130, 1229, 1232 |
| Tsp45I | GTSAC | 5 cut(s) | 39, 329, 464, 703, 1009 |
| TspDTI | ATGAA | 5 cut(s) | 938, 1190, 1217, 1266, 1469 |
| TspGWI | ACGGA | 2 cut(s) | 254, 1308 |
| VpaK11BI | GGWCC | 1 cut(s) | 407 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| XapI | RAATTY | 1 cut(s) | 883 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 469 |
| XhoI | CTCGAG | 1 cut(s) | 895 |
| XspI | CTAG | 2 cut(s) | 542, 831 |
| ZraI | GACGTC | 1 cut(s) | 788 |