Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001864

Physical Location & Seq

Genomic Coordinates Forward (+)

13705937 .. 13711084

Gene Structure 5148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1040700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGCTCCAGCAAGCAATTGGTTGTCCTTCTCTCTCATGTCTCCCATGGAAATGTTGAGGTCCTCTGAGTCCGATCAATCTCCCTTCGTCCCCTATGACGCGTCCTCCGCCGCCTCCCCCCACTACTTCCTCGACAACTTCTATGCCAACAACGGGTGGCCGACGAACCCAAAATCCCAAGTGTTTTTCGCGGACGGTGAGGACCAAAGCAAGCAGCAAGGCCAGTCCAGTTCACCAAATCTGTCACCGTTCGTCGACCCACAGAGCCACACTCAGCATATCCCGAAGCTCGAGGACTTTCTCGGCGATTCGTCATCGATGGTGCGCTATTCTGATAGCCAAACAGAGACCCAAGACTCGTCCCTGACTCACATCTACGACCAGAGCTCCACCTTCTTCGGCGGCGACCAGCACCAGCACCAGAACCAGCACCAGCAGCAGGAAGATCTCAAGGCGATTACTGGGTTCCAAGCGTTTTCGACCAACTCGGGCTCGGAGGTGGACTCGGCGTCCATGGCCCGGACGACTCAGCAGCAGCAGCTTTCTTGCACCGAGTTCGCGGGTCATTCTATTGAGTCGACCGGGAACGAGTTAGGGGTGTACAACTCGAGCTGCGCGGCGAATGCTTTGTCGCTTGGTGTCACCACCACTCAGAGCTCTTCTGATCAGAAAAAGGCCATTGTTGCCGTCGACACCGACGGTTCTAAGAAGATTGCTGATACTTTTGGCCAGAGGACTTCAATTTACAGAGGGGTCACTAGACACCGGTGGACGGGTAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCCAGGAAGGGGCGTCAAGGTGGATATGACAAGGAAGATAAGGCAGCAAGGGCTTATGATTTGGCTGCACTGAAATACTGGGGTCCTACTGCAACAACCAACTTTCCTGTTTCAACTTACGGCAAAGAACTGGAAGATATGAAGCATGTGACCAAGCAAGAATTCATTGCCTCTCTCAGAAGGAAAAGCAGTGGTTTTTCAAGAGGAGCTTCTATTTACAGGGGAGTTACAAGGCATCATCAACAAGGCCGATGGCAAGCAAGAATAGGCCGTGTGGCCGGGAACAAAGACCTATACCTGGGAACATTTGCTACAGAAGAGGAAGCAGCAGAGGCGTATGATATAGCGGCCATAAAGTTTAGGGGCATTAATGCAGTTACAAATTTTGAGATGAACCGATATGACGTTGAAGCTATTGGCAAGAGTTCTCTTCCTGTTGGTGGGGCAGCAAAGCGCTTGAAGCTCTCACTCGAAGCTGAAGAGCAGAAACCATCTGTGAGTCATGATCAGCAGCATCCTCAATGCAGCAGTGGCAACAACATCAATTTCACTTCCATGCAGCCAGTTCAATCCATACCATGCGGGATTCCATACGACGCTGCAGCTGCCAACGCTTATTATCACAACCTCTTCCACCAATTTCAGCCAAACTACTATGGCGCTTTGGATTCTGCTGGACTAAACCCTAACATTGCGACTCAGATGAACATGATGCCGCAGCAGCCAGCTGAGTTTTACATTTGGCCTAATCACCAATCCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003700 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009956 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010492 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0048364 GO:0048507 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060771 GO:0060772 GO:0060774 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

530

Amino Acids

58.65

Weight (kDa)

6.09

Isoelectric Point (pI)

57.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	249 - 303	5e-07	AP2 domain
AP2	PF00847	348 - 397	1.7e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G65510 AT5G65510 AT5G65510 AT5G65510
fragaria_vesca	FvH4_1g19530
malus_domestica	MD01G1040700.v1.1 MD15G1310900.v1.1
prunus_persica	Prupe.6G142500_v2.0.a1 Prupe.6G203000_v2.0.a1
pyrus_communis	pycom01g06820 pycom15g27450
rosa_chinensis	RchiOBHm_Chr2g0111031 RchiOBHm_Chr4g0405741
rosa_laevigata	RLG00000012851 RLG00000017859 RLG00000020876
rosa_multiflora	Rmu_co8195526.1_g000001 Rmu_sc0000041.1_g000014 Rmu_sc0003994.1_g000004
rosa_roxburghii	Rroxscaffold_2G00132730 Rroxscaffold_5G00366230
rosa_rugosa	Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700
rosa_samantha	Rh2AG222800 Rh2AG222900 Rh2BG234800 Rh2CG226300 Rh2DG230600 Rh2DG230700 Rh2DG399700 Rh4BG037900 Rh4CG141400 Rh6BG125200 Rh6CG051000 Rh7CG223000
rosa_wichuraiana	Rw2G017210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	255, 578, 690
AccII	CGCG	4 cut(s)	101, 191, 560, 617
AciI	CCGC	9 cut(s)	108, 111, 191, 402, 560, 617, 1172, 1407, 1541
AcoI	YGGCCR	4 cut(s)	158, 727, 1101, 1173
AcsI	RAATTY	2 cut(s)	986, 1207
AcuI	CTGAAG	1 cut(s)	1323
AcyI	GRCGYC	2 cut(s)	509, 838
AfaI	GTAC	1 cut(s)	602
AfeI	AGCGCT	1 cut(s)	1280
AfiI	CCNNNNNNNGG	7 cut(s)	153, 439, 519, 772, 834, 1123, 1265
AflIII	ACRYGT	1 cut(s)	99
AgeI	ACCGGT	1 cut(s)	765
AgsI	TTSAA	6 cut(s)	741, 939, 1026, 1235, 1285, 1394
AhdI	GACNNNNNGTC	1 cut(s)	508
AjnI	CCWGG	2 cut(s)	827, 1122
AjuI	GAANNNNNNNTTGG	2 cut(s)	971, 1003
AloI	GAACNNNNNNTCC	2 cut(s)	158, 190
Alw21I	GWGCWC	2 cut(s)	389, 659
Alw26I	GTCTC	2 cut(s)	45, 341
Ama87I	CYCGRG	3 cut(s)	290, 487, 607
Aor51HI	AGCGCT	1 cut(s)	1280
ApoI	RAATTY	2 cut(s)	986, 1207
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AseI	ATTAAT	1 cut(s)	1194
AsiGI	ACCGGT	1 cut(s)	765
AspLEI	GCGC	5 cut(s)	327, 617, 790, 1281, 1487
AspS9I	GGNCC	4 cut(s)	60, 202, 517, 908
AsuC2I	CCSGG	3 cut(s)	520, 583, 1105
AsuHPI	GGTGA	5 cut(s)	209, 225, 237, 634, 1568
AvaI	CYCGRG	3 cut(s)	290, 487, 607
AvaII	GGWCC	3 cut(s)	60, 202, 908
BalI	TGGCCA	1 cut(s)	729
BanII	GRGCYC	3 cut(s)	389, 494, 659
Bbv12I	GWGCWC	2 cut(s)	389, 659
BccI	CCATC	3 cut(s)	313, 1071, 1324
BceAI	ACGGC	3 cut(s)	671, 961, 1080
BcgI	CGANNNNNNTGC	2 cut(s)	538, 572
BciT130I	CCWGG	2 cut(s)	829, 1124
BclI	TGATCA	2 cut(s)	664, 1330
BcnI	CCSGG	3 cut(s)	520, 583, 1105
BcoDI	GTCTC	2 cut(s)	45, 341
BfaI	CTAG	1 cut(s)	759
BfmI	CTRYAG	3 cut(s)	808, 1137, 1425
BfoI	RGCGCY	2 cut(s)	1282, 1488
BglII	AGATCT	1 cut(s)	445
Bme1390I	CCNGG	5 cut(s)	520, 583, 829, 1105, 1124
Bme18I	GGWCC	3 cut(s)	60, 202, 908
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	3 cut(s)	290, 487, 607
BmgT120I	GGNCC	4 cut(s)	60, 202, 517, 908
BmiI	GGNNCC	3 cut(s)	6, 467, 909
BmrFI	CCNGG	5 cut(s)	520, 583, 829, 1105, 1124
BmrI	ACTGGG	2 cut(s)	471, 913
BmsI	GCATC	4 cut(s)	799, 1069, 1348, 1527
BmuI	ACTGGG	2 cut(s)	471, 913
BplI	GAGNNNNNCTC	4 cut(s)	256, 288, 488, 520
BpuEI	CTTGAG	1 cut(s)	434
BpuMI	CCSGG	3 cut(s)	520, 583, 1105
Bsa29I	ATCGAT	1 cut(s)	317
BsaHI	GRCGYC	2 cut(s)	509, 838
BsaI	GGTCTC	1 cut(s)	341
BsaJI	CCNNGG	3 cut(s)	45, 513, 1123
BsaWI	WCCGGW	1 cut(s)	765
BsaXI	ACNNNNNCTCC	4 cut(s)	89, 119, 371, 401
Bsc4I	CCNNNNNNNGG	7 cut(s)	153, 439, 519, 772, 834, 1123, 1265
Bse118I	RCCGGY	1 cut(s)	765
Bse1I	ACTGG	6 cut(s)	223, 228, 466, 908, 960, 1388
Bse3DI	GCAATG	2 cut(s)	990, 1515
BseBI	CCWGG	2 cut(s)	829, 1124
BseCI	ATCGAT	1 cut(s)	317
BseDI	CCNNGG	3 cut(s)	45, 513, 1123
BseGI	GGATG	1 cut(s)	1339
BseLI	CCNNNNNNNGG	7 cut(s)	153, 439, 519, 772, 834, 1123, 1265
BseMI	GCAATG	2 cut(s)	990, 1515
BseMII	CTCAG	7 cut(s)	57, 287, 542, 665, 1015, 1538, 1545
BseNI	ACTGG	6 cut(s)	223, 228, 466, 908, 960, 1388
BseRI	GAGGAG	1 cut(s)	1044
BsgI	GTGCAG	1 cut(s)	876
Bsh1236I	CGCG	4 cut(s)	101, 191, 560, 617
Bsh1285I	CGRYCG	1 cut(s)	582
BshTI	ACCGGT	1 cut(s)	765
BshVI	ATCGAT	1 cut(s)	317
BsiEI	CGRYCG	1 cut(s)	582
BsiHKAI	GWGCWC	2 cut(s)	389, 659
BsiHKCI	CYCGRG	3 cut(s)	290, 487, 607
BsiSI	CCGG	4 cut(s)	520, 582, 766, 1104
BslFI	GGGAC	2 cut(s)	74, 346
BslI	CCNNNNNNNGG	7 cut(s)	153, 439, 519, 772, 834, 1123, 1265
BsmAI	GTCTC	2 cut(s)	45, 341
BsmFI	GGGAC	2 cut(s)	74, 346
BsmI	GAATGC	1 cut(s)	628
Bso31I	GGTCTC	1 cut(s)	341
BsoBI	CYCGRG	3 cut(s)	290, 487, 607
Bsp1286I	GDGCHC	3 cut(s)	389, 494, 659
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	4 cut(s)	73, 445, 664, 1330
Bsp19I	CCATGG	2 cut(s)	45, 513
BspACI	CCGC	9 cut(s)	108, 111, 191, 402, 560, 617, 1172, 1407, 1541
BspCNI	CTCAG	7 cut(s)	58, 286, 541, 664, 1014, 1537, 1546
BspDI	ATCGAT	1 cut(s)	317
BspFNI	CGCG	4 cut(s)	101, 191, 560, 617
BspHI	TCATGA	1 cut(s)	1327
BspLI	GGNNCC	3 cut(s)	6, 467, 909
BspMAI	CTGCAG	1 cut(s)	1429
BspQI	GCTCTTC	2 cut(s)	664, 1299
BspTNI	GGTCTC	1 cut(s)	341
BsrDI	GCAATG	2 cut(s)	990, 1515
BsrFI	RCCGGY	1 cut(s)	765
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	6 cut(s)	223, 228, 466, 908, 960, 1388
BssAI	RCCGGY	1 cut(s)	765
BssECI	CCNNGG	3 cut(s)	45, 513, 1123
BssMI	GATC	4 cut(s)	73, 445, 664, 1330
BssNI	GRCGYC	2 cut(s)	509, 838
BssT1I	CCWWGG	2 cut(s)	45, 513
Bst2UI	CCWGG	2 cut(s)	829, 1124
Bst4CI	ACNGT	3 cut(s)	197, 249, 701
Bst6I	CTCTTC	6 cut(s)	664, 808, 1137, 1260, 1299, 1460
BstACI	GRCGYC	2 cut(s)	509, 838
BstAUI	TGTACA	1 cut(s)	600
BstC8I	GCNNGC	4 cut(s)	13, 212, 1083, 1551
BstDEI	CTNAG	8 cut(s)	66, 273, 528, 651, 705, 1001, 1524, 1554
BstDSI	CCRYGG	2 cut(s)	45, 513
BstF5I	GGATG	1 cut(s)	1339
BstFNI	CGCG	4 cut(s)	101, 191, 560, 617
BstH2I	RGCGCY	2 cut(s)	1282, 1488
BstHHI	GCGC	5 cut(s)	327, 617, 790, 1281, 1487
BstKTI	GATC	4 cut(s)	76, 448, 667, 1333
BstMAI	GTCTC	2 cut(s)	45, 341
BstMBI	GATC	4 cut(s)	73, 445, 664, 1330
BstMCI	CGRYCG	1 cut(s)	582
BstNI	CCWGG	2 cut(s)	829, 1124
BstNSI	RCATGY	1 cut(s)	974
BstSCI	CCNGG	5 cut(s)	518, 581, 827, 1103, 1122
BstSFI	CTRYAG	3 cut(s)	808, 1137, 1425
BstUI	CGCG	4 cut(s)	101, 191, 560, 617
BstX2I	RGATCY	1 cut(s)	445
BstYI	RGATCY	1 cut(s)	445
Bsu15I	ATCGAT	1 cut(s)	317
BsuTUI	ATCGAT	1 cut(s)	317
BtgI	CCRYGG	2 cut(s)	45, 513
BtsCI	GGATG	1 cut(s)	1339
BtsI	GCAGTG	2 cut(s)	1021, 1360
BtsIMutI	CAGTG	3 cut(s)	893, 1021, 1360
Cac8I	GCNNGC	4 cut(s)	13, 212, 1083, 1551
CciI	TCATGA	1 cut(s)	1327
CfoI	GCGC	5 cut(s)	327, 617, 790, 1281, 1487
Cfr10I	RCCGGY	1 cut(s)	765
Cfr13I	GGNCC	4 cut(s)	60, 202, 517, 908
ClaI	ATCGAT	1 cut(s)	317
CseI	GACGC	5 cut(s)	90, 107, 498, 827, 1430
Csp6I	GTAC	1 cut(s)	601
CspAI	ACCGGT	1 cut(s)	765
CviAII	CATG	8 cut(s)	37, 46, 514, 971, 1328, 1381, 1404, 1534
CviQI	GTAC	1 cut(s)	601
DdeI	CTNAG	8 cut(s)	66, 273, 528, 651, 705, 1001, 1524, 1554
DpnI	GATC	4 cut(s)	75, 447, 666, 1332
DpnII	GATC	4 cut(s)	73, 445, 664, 1330
DriI	GACNNNNNGTC	1 cut(s)	508
EaeI	YGGCCR	4 cut(s)	158, 727, 1101, 1173
Eam1104I	CTCTTC	6 cut(s)	664, 808, 1137, 1260, 1299, 1460
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	6 cut(s)	664, 808, 1137, 1260, 1299, 1460
EciI	GGCGGA	1 cut(s)	97
Ecl136II	GAGCTC	2 cut(s)	387, 657
Eco130I	CCWWGG	2 cut(s)	45, 513
Eco24I	GRGCYC	3 cut(s)	389, 494, 659
Eco31I	GGTCTC	1 cut(s)	341
Eco47I	GGWCC	3 cut(s)	60, 202, 908
Eco47III	AGCGCT	1 cut(s)	1280
Eco53kI	GAGCTC	2 cut(s)	387, 657
Eco57I	CTGAAG	1 cut(s)	1323
Eco88I	CYCGRG	3 cut(s)	290, 487, 607
EcoICRI	GAGCTC	2 cut(s)	387, 657
EcoO109I	RGGNCCY	2 cut(s)	60, 908
EcoRI	GAATTC	1 cut(s)	986
EcoRII	CCWGG	2 cut(s)	827, 1122
EcoT14I	CCWWGG	2 cut(s)	45, 513
EcoT38I	GRGCYC	3 cut(s)	389, 494, 659
ErhI	CCWWGG	2 cut(s)	45, 513
FaeI	CATG	8 cut(s)	40, 49, 517, 974, 1331, 1384, 1407, 1537
FalI	AAGNNNNNCTT	2 cut(s)	1018, 1050
FaqI	GGGAC	2 cut(s)	74, 346
FatI	CATG	8 cut(s)	36, 45, 513, 970, 1327, 1380, 1403, 1533
FauI	CCCGC	2 cut(s)	553, 1400
FbaI	TGATCA	2 cut(s)	664, 1330
FblI	GTMKAC	3 cut(s)	255, 578, 690
FokI	GGATG	1 cut(s)	1326
FriOI	GRGCYC	3 cut(s)	389, 494, 659
FspBI	CTAG	1 cut(s)	759
GlaI	GCGC	5 cut(s)	326, 616, 789, 1280, 1486
HaeII	RGCGCY	2 cut(s)	1282, 1488
HapII	CCGG	4 cut(s)	520, 582, 766, 1104
HgaI	GACGC	5 cut(s)	90, 107, 498, 827, 1430
HhaI	GCGC	5 cut(s)	327, 617, 790, 1281, 1487
Hin1I	GRCGYC	2 cut(s)	509, 838
Hin1II	CATG	8 cut(s)	40, 49, 517, 974, 1331, 1384, 1407, 1537
Hin6I	GCGC	5 cut(s)	325, 615, 788, 1279, 1485
HinP1I	GCGC	5 cut(s)	325, 615, 788, 1279, 1485
HincII	GTYRAC	3 cut(s)	256, 579, 691
HindII	GTYRAC	3 cut(s)	256, 579, 691
HpaII	CCGG	4 cut(s)	520, 582, 766, 1104
HphI	GGTGA	5 cut(s)	209, 225, 237, 634, 1568
Hpy166II	GTNNAC	7 cut(s)	233, 256, 502, 579, 601, 691, 771
Hpy188I	TCNGA	9 cut(s)	67, 73, 334, 496, 654, 664, 669, 1004, 1527
Hpy188III	TCNNGA	3 cut(s)	283, 1026, 1328
Hpy8I	GTNNAC	7 cut(s)	233, 256, 502, 579, 601, 691, 771
Hpy99I	CGWCG	5 cut(s)	166, 257, 692, 701, 1424
HpyAV	CCTTC	5 cut(s)	37, 94, 403, 826, 999
HpyCH4III	ACNGT	3 cut(s)	197, 249, 701
HpyCH4IV	ACGT	1 cut(s)	1230
HpyCH4V	TGCA	7 cut(s)	549, 893, 917, 1199, 1350, 1384, 1427
HpyF3I	CTNAG	8 cut(s)	66, 273, 528, 651, 705, 1001, 1524, 1554
HpySE526I	ACGT	1 cut(s)	1230
Hsp92I	GRCGYC	2 cut(s)	509, 838
Hsp92II	CATG	8 cut(s)	40, 49, 517, 974, 1331, 1384, 1407, 1537
HspAI	GCGC	5 cut(s)	325, 615, 788, 1279, 1485
Ksp22I	TGATCA	2 cut(s)	664, 1330
Kzo9I	GATC	4 cut(s)	73, 445, 664, 1330
LguI	GCTCTTC	2 cut(s)	664, 1299
LmnI	GCTCC	3 cut(s)	10, 392, 1031
LweI	GCATC	4 cut(s)	799, 1069, 1348, 1527
MaeI	CTAG	1 cut(s)	759
MaeII	ACGT	1 cut(s)	1230
MaeIII	GTNAC	6 cut(s)	243, 640, 754, 973, 1051, 1201
MalI	GATC	4 cut(s)	75, 447, 666, 1332
MboI	GATC	4 cut(s)	73, 445, 664, 1330
MfeI	CAATTG	1 cut(s)	16
MflI	RGATCY	1 cut(s)	445
MhlI	GDGCHC	3 cut(s)	389, 494, 659
MlsI	TGGCCA	1 cut(s)	729
MluCI	AATT	6 cut(s)	16, 741, 986, 1207, 1369, 1463
MluI	ACGCGT	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	729
MlyI	GAGTC	8 cut(s)	77, 350, 361, 497, 520, 584, 1333, 1516
Mox20I	TGGCCA	1 cut(s)	729
MscI	TGGCCA	1 cut(s)	729
MseI	TTAA	2 cut(s)	1194, 1588
MslI	CAYNNNNRTG	2 cut(s)	50, 1379
Msp20I	TGGCCA	1 cut(s)	729
MspA1I	CMGCKG	3 cut(s)	807, 1430, 1553
MspI	CCGG	4 cut(s)	520, 582, 766, 1104
MspR9I	CCNGG	5 cut(s)	520, 583, 829, 1105, 1124
MunI	CAATTG	1 cut(s)	16
Mva1269I	GAATGC	1 cut(s)	628
MvaI	CCWGG	2 cut(s)	829, 1124
MvnI	CGCG	4 cut(s)	101, 191, 560, 617
NciI	CCSGG	3 cut(s)	520, 583, 1105
NcoI	CCATGG	2 cut(s)	45, 513
NdeII	GATC	4 cut(s)	73, 445, 664, 1330
NlaIII	CATG	8 cut(s)	40, 49, 517, 974, 1331, 1384, 1407, 1537
NlaIV	GGNNCC	3 cut(s)	6, 467, 909
NmeAIII	GCCGAG	2 cut(s)	282, 485
NmuCI	GTSAC	4 cut(s)	243, 640, 754, 973
NspI	RCATGY	1 cut(s)	974
PaeR7I	CTCGAG	2 cut(s)	290, 607
PagI	TCATGA	1 cut(s)	1327
PciSI	GCTCTTC	2 cut(s)	664, 1299
PctI	GAATGC	1 cut(s)	628
PfeI	GAWTC	3 cut(s)	308, 1411, 1493
PinAI	ACCGGT	1 cut(s)	765
PleI	GAGTC	8 cut(s)	76, 350, 361, 497, 520, 583, 1332, 1516
PpsI	GAGTC	8 cut(s)	76, 350, 361, 497, 520, 583, 1332, 1516
PpuMI	RGGWCCY	2 cut(s)	60, 908
PshBI	ATTAAT	1 cut(s)	1194
Psp124BI	GAGCTC	2 cut(s)	389, 659
Psp5II	RGGWCCY	2 cut(s)	60, 908
Psp6I	CCWGG	2 cut(s)	827, 1122
PspGI	CCWGG	2 cut(s)	827, 1122
PspN4I	GGNNCC	3 cut(s)	6, 467, 909
PspPI	GGNCC	4 cut(s)	60, 202, 517, 908
PspPPI	RGGWCCY	2 cut(s)	60, 908
PspXI	VCTCGAGB	2 cut(s)	290, 607
PsrI	GAACNNNNNNTAC	2 cut(s)	1120, 1152
PstI	CTGCAG	1 cut(s)	1429
PsuI	RGATCY	1 cut(s)	445
PvuII	CAGCTG	3 cut(s)	807, 1430, 1553
RsaI	GTAC	1 cut(s)	602
RsaNI	GTAC	1 cut(s)	601
RseI	CAYNNNNRTG	2 cut(s)	50, 1379
SacI	GAGCTC	2 cut(s)	389, 659
SalI	GTCGAC	3 cut(s)	254, 577, 689
SapI	GCTCTTC	2 cut(s)	664, 1299
SaqAI	TTAA	2 cut(s)	1194, 1588
Sau3AI	GATC	4 cut(s)	73, 445, 664, 1330
Sau96I	GGNCC	4 cut(s)	60, 202, 517, 908
SchI	GAGTC	8 cut(s)	77, 350, 361, 497, 520, 584, 1333, 1516
ScrFI	CCNGG	5 cut(s)	520, 583, 829, 1105, 1124
SduI	GDGCHC	3 cut(s)	389, 494, 659
SfaNI	GCATC	4 cut(s)	799, 1069, 1348, 1527
SfcI	CTRYAG	3 cut(s)	808, 1137, 1425
Sfr274I	CTCGAG	2 cut(s)	290, 607
SgrAI	CRCCGGYG	1 cut(s)	765
SinI	GGWCC	3 cut(s)	60, 202, 908
SlaI	CTCGAG	2 cut(s)	290, 607
SmiMI	CAYNNNNRTG	2 cut(s)	50, 1379
SmlI	CTYRAG	3 cut(s)	290, 449, 607
SmoI	CTYRAG	3 cut(s)	290, 449, 607
Sse9I	AATT	6 cut(s)	16, 741, 986, 1207, 1369, 1463
SsiI	CCGC	9 cut(s)	108, 111, 191, 402, 560, 617, 1172, 1407, 1541
SspMI	CTAG	1 cut(s)	759
SstI	GAGCTC	2 cut(s)	389, 659
StyD4I	CCNGG	5 cut(s)	518, 581, 827, 1103, 1122
StyI	CCWWGG	2 cut(s)	45, 513
TaaI	ACNGT	3 cut(s)	197, 249, 701
TaiI	ACGT	1 cut(s)	1233
TaqI	TCGA	9 cut(s)	132, 255, 291, 317, 479, 578, 608, 690, 1296
TasI	AATT	6 cut(s)	16, 741, 986, 1207, 1369, 1463
TatI	WGTACW	1 cut(s)	600
TauI	GCSGC	5 cut(s)	113, 405, 620, 1175, 1543
TfiI	GAWTC	3 cut(s)	308, 1411, 1493
Tru1I	TTAA	2 cut(s)	1194, 1588
Tru9I	TTAA	2 cut(s)	1194, 1588
TscAI	CASTG	3 cut(s)	900, 1021, 1360
TseFI	GTSAC	4 cut(s)	243, 640, 754, 973
Tsp45I	GTSAC	4 cut(s)	243, 640, 754, 973
TspDTI	ATGAA	5 cut(s)	798, 979, 980, 1232, 1544
TspRI	CASTG	3 cut(s)	900, 1021, 1360
VpaK11BI	GGWCC	3 cut(s)	60, 202, 908
VspI	ATTAAT	1 cut(s)	1194
XapI	RAATTY	2 cut(s)	986, 1207
XceI	RCATGY	1 cut(s)	974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	15
XhoI	CTCGAG	2 cut(s)	290, 607
XmiI	GTMKAC	3 cut(s)	255, 578, 690
XspI	CTAG	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.