Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001864

Physical Location & Seq

Genomic Coordinates Reverse (-)

22665843 .. 22670915

Gene Structure 5073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48464

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCTCCGGCGACTAATTGGCTATCCTTCTCCTTAATGTCCCCCATGGAAATGCTAAGGTCCTCCTCCGAGTCCGAGTCTCCCTTCGCTCAGGCTTACGATACCGCCGCTGTTACTGCTCCCTCTCCTCATTACTACCTCGACAACTTCTACGCCAACGGGTGGACGAACCCGAAATCCGAAGTGTTCTACACGGAAGGCGAGGAAGACCAGCAAACGAAACAGACCCACTCCGATTCGCTTGCGAGCTTCATCGACCCACAAACCCAGAACCAGCCGATTCCCAAGCTCGAGGACTTTCTCGGAGACTCCATGGTGCGCTACGCCGATAGCCAAACGGAGACGCAGGACTCGTCGCTGACCCAAATCTACGACCAGGGCTCGGCCTACTTTGGTGACCACCACCAGAACCAGGATCTCAAGGCGATTACTGGGTTCCAAGCCTTTTCGGCTAACTCGGGCTCCGAGGTCGAGGACTCGGCCTCCATGGCCAGGACTCAGCTCGCTTGCGCCGAGTTTACGGGTCACTCGGTTGAGTCGATTGGGAACGAGTTGGGTTTCTCGAGCTGTGGTGCAACGAACACAAGCAATGCTTTGTCTCTTGGGGTCACTAATACGAATACTAGTACTCAGACCTCGAATCGTGAAAAGGCTATTGTTGCGGTGGACACTGATAGCACTAAGAAAATATCTGATACTTTTGGGCAGAGGACTTCAATTTACAGAGGAGTTACTAGACATCGTTGGACGGGTAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGAAGAGAGGGTCAGGCCAGGAAAGGACGTCAAGGTGGATATGACATGGAAGATAAGGCAGCAAGGGCTTATGATTTGGCTGCTCTGAAATACTGGGGACCTACTGCGACTACCAACTTTCCTGTTTCAACTTACAGCAAAGAACTGGAAGACATGAAACTTGTGACCAAGCAAGAATTCATTGCTTCCCTCAGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTATGTACCGAGGTGTAACAAGGCATCATCAACAAGGTCGCTGGCAAGCAAGAATAGGCCGTGTTGCTGGGAACAAAGACCTTTACCTAGGGACTTTTGCTACTGAAGAGGAAGCAGCAGAGGCCTATGACATAGCAGCCATAAAGTTTAGGGGCATCAATGCAGTAACAAATTTCGAGATGAATCGATATGATGTAGAAGCTATTGGCAAGAGTTCTCTTCCTGTTGGTGGTTCAGCGAAGCGCTTAAAGATCTCTCTTGAATCGGAAGAGCAGAAACCATCTGTGACCAACCATGATCAGCAGCAGCAGAATTCTCAGTGCAGCAGTGGCAGCAACAGCAACAACATCAATTTTGCTAATTCCATGGCGCAACCAATTCAGACCATCCCTTGTGGAATTCCATATGATCATGCTGCAGCACTTTATCATCACAACCTTCTCCAACAGTTCCAATCGTATAACTACTATGGCACTACTTCGGATTCTTCAGCAGGATCGCACCCTAACATTGCAACAAGTCAGATGACTATGGCGATGATGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGCTGAGTTCTTTCTCTGGCCTCAGTACCAAACTCATCATTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003700 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009956 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010492 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0048364 GO:0048507 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060771 GO:0060772 GO:0060774 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

543

Amino Acids

60.35

Weight (kDa)

5.68

Isoelectric Point (pI)

49.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	241 - 295	2.9e-07	AP2 domain
AP2	PF00847	340 - 389	2.1e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G65510 AT5G65510 AT5G65510 AT5G65510
fragaria_vesca	FvH4_1g19530
malus_domestica	MD01G1040700.v1.1 MD15G1310900.v1.1
prunus_persica	Prupe.6G142500_v2.0.a1 Prupe.6G203000_v2.0.a1
pyrus_communis	pycom01g06820 pycom15g27450
rosa_chinensis	RchiOBHm_Chr2g0111031 RchiOBHm_Chr4g0405741
rosa_laevigata	RLG00000012851 RLG00000017859 RLG00000020876
rosa_multiflora	Rmu_co8195526.1_g000001 Rmu_sc0000041.1_g000014 Rmu_sc0003994.1_g000004
rosa_roxburghii	Rroxscaffold_2G00132730 Rroxscaffold_5G00366230
rosa_rugosa	Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700
rosa_samantha	Rh2AG222800 Rh2AG222900 Rh2BG234800 Rh2CG226300 Rh2DG230600 Rh2DG230700 Rh2DG399700 Rh4BG037900 Rh4CG141400 Rh6BG125200 Rh6CG051000 Rh7CG223000
rosa_wichuraiana	Rw2G017210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	817
AccB7I	CCANNNNNTGG	1 cut(s)	162
AciI	CCGC	3 cut(s)	105, 108, 662
AclWI	GGATC	2 cut(s)	423, 1516
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	4 cut(s)	962, 1183, 1324, 1410
AcuI	CTGAAG	2 cut(s)	1137, 1485
AcyI	GRCGYC	1 cut(s)	814
AfaI	GTAC	3 cut(s)	628, 1019, 1613
AfeI	AGCGCT	1 cut(s)	1256
AfiI	CCNNNNNNNGG	6 cut(s)	162, 382, 412, 492, 981, 1241
AgsI	TTSAA	4 cut(s)	717, 915, 1002, 1274
AhlI	ACTAGT	1 cut(s)	623
AjnI	CCWGG	4 cut(s)	375, 411, 491, 803
AjuI	GAANNNNNNNTTGG	2 cut(s)	947, 979
AloI	GAACNNNNNNTCC	2 cut(s)	161, 193
AluBI	AGCT	8 cut(s)	249, 289, 502, 567, 783, 1010, 1214, 1589
AluI	AGCT	8 cut(s)	249, 289, 502, 567, 783, 1010, 1214, 1589
Alw26I	GTCTC	4 cut(s)	84, 300, 335, 603
AlwI	GGATC	2 cut(s)	423, 1516
Ama87I	CYCGRG	3 cut(s)	290, 457, 562
Aor51HI	AGCGCT	1 cut(s)	1256
AoxI	GGCC	7 cut(s)	384, 480, 489, 801, 1069, 1134, 1604
ApoI	RAATTY	4 cut(s)	962, 1183, 1324, 1410
AspA2I	CCTAGG	1 cut(s)	1099
AspLEI	GCGC	5 cut(s)	321, 512, 766, 1257, 1384
AspS9I	GGNCC	2 cut(s)	60, 884
AsuHPI	GGTGA	1 cut(s)	407
AvaI	CYCGRG	3 cut(s)	290, 457, 562
AvaII	GGWCC	2 cut(s)	60, 884
AvrII	CCTAGG	1 cut(s)	1099
BalI	TGGCCA	1 cut(s)	491
BanII	GRGCYC	2 cut(s)	383, 464
BbsI	GAAGAC	2 cut(s)	213, 942
BccI	CCATC	2 cut(s)	1300, 1406
BceAI	ACGGC	1 cut(s)	1056
BcgI	CGANNNNNNTGC	2 cut(s)	224, 258
BciT130I	CCWGG	4 cut(s)	377, 413, 493, 805
BclI	TGATCA	2 cut(s)	1309, 1420
BcoDI	GTCTC	4 cut(s)	84, 300, 335, 603
BcuI	ACTAGT	1 cut(s)	623
BfaI	CTAG	3 cut(s)	624, 735, 1100
BfmI	CTRYAG	2 cut(s)	784, 1428
BfoI	RGCGCY	1 cut(s)	1258
BglI	GCCNNNNNGGC	2 cut(s)	449, 488
BglII	AGATCT	1 cut(s)	1263
BlnI	CCTAGG	1 cut(s)	1099
BmcAI	AGTACT	1 cut(s)	628
Bme1390I	CCNGG	4 cut(s)	377, 413, 493, 805
Bme18I	GGWCC	2 cut(s)	60, 884
BmeT110I	CYCGRG	3 cut(s)	290, 457, 562
BmgT120I	GGNCC	2 cut(s)	60, 884
BmiI	GGNNCC	4 cut(s)	6, 437, 463, 885
BmrFI	CCNGG	4 cut(s)	377, 413, 493, 805
BmrI	ACTGGG	2 cut(s)	441, 889
BmsI	GCATC	4 cut(s)	775, 1045, 1176, 1542
BmuI	ACTGGG	2 cut(s)	441, 889
BpiI	GAAGAC	2 cut(s)	213, 942
Bpu10I	CCTNAGC	2 cut(s)	56, 90
BpuEI	CTTGAG	1 cut(s)	404
Bsa29I	ATCGAT	1 cut(s)	1198
BsaHI	GRCGYC	1 cut(s)	814
BsaJI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1021, 1099, 1377
BsaXI	ACNNNNNCTCC	4 cut(s)	446, 467, 476, 497
Bsc4I	CCNNNNNNNGG	6 cut(s)	162, 382, 412, 492, 981, 1241
Bse1I	ACTGG	3 cut(s)	436, 884, 936
Bse3DI	GCAATG	3 cut(s)	595, 966, 1521
BseBI	CCWGG	4 cut(s)	377, 413, 493, 805
BseCI	ATCGAT	1 cut(s)	1198
BseDI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1021, 1099, 1377
BseGI	GGATG	1 cut(s)	1398
BseLI	CCNNNNNNNGG	6 cut(s)	162, 382, 412, 492, 981, 1241
BseMI	GCAATG	3 cut(s)	595, 966, 1521
BseMII	CTCAG	7 cut(s)	104, 512, 644, 991, 1343, 1581, 1622
BseNI	ACTGG	3 cut(s)	436, 884, 936
BseRI	GAGGAG	3 cut(s)	55, 117, 741
BseYI	CCCAGC	2 cut(s)	1079, 1557
BsgI	GTGCAG	1 cut(s)	1354
BshFI	GGCC	7 cut(s)	386, 482, 491, 803, 1071, 1136, 1606
BshVI	ATCGAT	1 cut(s)	1198
BsiHKCI	CYCGRG	3 cut(s)	290, 457, 562
BsiSI	CCGG	1 cut(s)	8
BslFI	GGGAC	3 cut(s)	25, 897, 1117
BslI	CCNNNNNNNGG	6 cut(s)	162, 382, 412, 492, 981, 1241
BsmAI	GTCTC	4 cut(s)	84, 300, 335, 603
BsmBI	CGTCTC	1 cut(s)	335
BsmFI	GGGAC	3 cut(s)	25, 897, 1117
BsnI	GGCC	7 cut(s)	386, 482, 491, 803, 1071, 1136, 1606
BsoBI	CYCGRG	3 cut(s)	290, 457, 562
Bsp1286I	GDGCHC	2 cut(s)	383, 464
Bsp143I	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
Bsp19I	CCATGG	4 cut(s)	45, 312, 486, 1377
BspACI	CCGC	3 cut(s)	105, 108, 662
BspANI	GGCC	7 cut(s)	386, 482, 491, 803, 1071, 1136, 1606
BspCNI	CTCAG	7 cut(s)	103, 511, 643, 990, 1342, 1582, 1621
BspDI	ATCGAT	1 cut(s)	1198
BspLI	GGNNCC	4 cut(s)	6, 437, 463, 885
BspMAI	CTGCAG	1 cut(s)	1432
BspPI	GGATC	2 cut(s)	423, 1516
BspQI	GCTCTTC	1 cut(s)	1275
BsrDI	GCAATG	3 cut(s)	595, 966, 1521
BsrI	ACTGG	3 cut(s)	436, 884, 936
BssECI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1021, 1099, 1377
BssMI	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
BssNI	GRCGYC	1 cut(s)	814
BssT1I	CCWWGG	5 cut(s)	45, 312, 486, 1099, 1377
Bst2UI	CCWGG	4 cut(s)	377, 413, 493, 805
Bst4CI	ACNGT	1 cut(s)	1461
Bst6I	CTCTTC	4 cut(s)	784, 1113, 1236, 1275
BstACI	GRCGYC	1 cut(s)	814
BstC8I	GCNNGC	7 cut(s)	243, 247, 504, 508, 1055, 1059, 1587
BstDEI	CTNAG	9 cut(s)	56, 90, 498, 630, 681, 977, 1329, 1590, 1608
BstDSI	CCRYGG	4 cut(s)	45, 312, 486, 1377
BstEII	GGTNACC	1 cut(s)	395
BstF5I	GGATG	1 cut(s)	1398
BstH2I	RGCGCY	1 cut(s)	1258
BstHHI	GCGC	5 cut(s)	321, 512, 766, 1257, 1384
BstKTI	GATC	5 cut(s)	418, 1266, 1312, 1423, 1511
BstMAI	GTCTC	4 cut(s)	84, 300, 335, 603
BstMBI	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
BstNI	CCWGG	4 cut(s)	377, 413, 493, 805
BstPI	GGTNACC	1 cut(s)	395
BstSCI	CCNGG	4 cut(s)	375, 411, 491, 803
BstSFI	CTRYAG	2 cut(s)	784, 1428
BstV2I	GAAGAC	2 cut(s)	213, 942
BstX2I	RGATCY	2 cut(s)	415, 1263
BstYI	RGATCY	2 cut(s)	415, 1263
Bsu15I	ATCGAT	1 cut(s)	1198
BsuRI	GGCC	7 cut(s)	386, 482, 491, 803, 1071, 1136, 1606
BsuTUI	ATCGAT	1 cut(s)	1198
BtgI	CCRYGG	4 cut(s)	45, 312, 486, 1377
BtgZI	GCGATG	1 cut(s)	1562
BtsCI	GGATG	1 cut(s)	1398
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	3 cut(s)	669, 1337, 1345
Cac8I	GCNNGC	7 cut(s)	243, 247, 504, 508, 1055, 1059, 1587
CfoI	GCGC	5 cut(s)	321, 512, 766, 1257, 1384
Cfr13I	GGNCC	2 cut(s)	60, 884
ClaI	ATCGAT	1 cut(s)	1198
CseI	GACGC	1 cut(s)	352
Csp6I	GTAC	3 cut(s)	627, 1018, 1612
CviAII	CATG	8 cut(s)	46, 313, 487, 832, 940, 1307, 1378, 1424
CviQI	GTAC	3 cut(s)	627, 1018, 1612
DdeI	CTNAG	9 cut(s)	56, 90, 498, 630, 681, 977, 1329, 1590, 1608
DpnI	GATC	5 cut(s)	417, 1265, 1311, 1422, 1510
DpnII	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	4 cut(s)	784, 1113, 1236, 1275
EarI	CTCTTC	4 cut(s)	784, 1113, 1236, 1275
Eco130I	CCWWGG	5 cut(s)	45, 312, 486, 1099, 1377
Eco147I	AGGCCT	1 cut(s)	1136
Eco24I	GRGCYC	2 cut(s)	383, 464
Eco47I	GGWCC	2 cut(s)	60, 884
Eco47III	AGCGCT	1 cut(s)	1256
Eco57I	CTGAAG	2 cut(s)	1137, 1485
Eco88I	CYCGRG	3 cut(s)	290, 457, 562
Eco91I	GGTNACC	1 cut(s)	395
EcoO109I	RGGNCCY	2 cut(s)	60, 884
EcoO65I	GGTNACC	1 cut(s)	395
EcoRI	GAATTC	3 cut(s)	962, 1324, 1410
EcoRII	CCWGG	4 cut(s)	375, 411, 491, 803
EcoT14I	CCWWGG	5 cut(s)	45, 312, 486, 1099, 1377
EcoT38I	GRGCYC	2 cut(s)	383, 464
ErhI	CCWWGG	5 cut(s)	45, 312, 486, 1099, 1377
Esp3I	CGTCTC	1 cut(s)	335
FaeI	CATG	8 cut(s)	49, 316, 490, 835, 943, 1310, 1381, 1427
FalI	AAGNNNNNCTT	4 cut(s)	577, 609, 994, 1026
FaqI	GGGAC	3 cut(s)	25, 897, 1117
FatI	CATG	8 cut(s)	45, 312, 486, 831, 939, 1306, 1377, 1423
FauNDI	CATATG	1 cut(s)	1417
FbaI	TGATCA	2 cut(s)	1309, 1420
FokI	GGATG	1 cut(s)	1385
FriOI	GRGCYC	2 cut(s)	383, 464
FspBI	CTAG	3 cut(s)	624, 735, 1100
GlaI	GCGC	5 cut(s)	320, 511, 765, 1256, 1383
GsaI	CCCAGC	2 cut(s)	1083, 1561
HaeII	RGCGCY	1 cut(s)	1258
HaeIII	GGCC	7 cut(s)	386, 482, 491, 803, 1071, 1136, 1606
HapII	CCGG	1 cut(s)	8
HgaI	GACGC	1 cut(s)	352
HhaI	GCGC	5 cut(s)	321, 512, 766, 1257, 1384
Hin1I	GRCGYC	1 cut(s)	814
Hin1II	CATG	8 cut(s)	49, 316, 490, 835, 943, 1310, 1381, 1427
Hin6I	GCGC	5 cut(s)	319, 510, 764, 1255, 1382
HinP1I	GCGC	5 cut(s)	319, 510, 764, 1255, 1382
HpaII	CCGG	1 cut(s)	8
HphI	GGTGA	1 cut(s)	407
Hpy166II	GTNNAC	3 cut(s)	165, 519, 667
Hpy188III	TCNNGA	4 cut(s)	562, 644, 1189, 1271
Hpy8I	GTNNAC	3 cut(s)	165, 519, 667
Hpy99I	CGWCG	1 cut(s)	358
HpyAV	CCTTC	5 cut(s)	37, 94, 191, 975, 1460
HpyCH4III	ACNGT	1 cut(s)	1461
HpyCH4IV	ACGT	1 cut(s)	814
HpyCH4V	TGCA	5 cut(s)	575, 1175, 1335, 1430, 1526
HpyF3I	CTNAG	9 cut(s)	56, 90, 498, 630, 681, 977, 1329, 1590, 1608
HpySE526I	ACGT	1 cut(s)	814
Hsp92I	GRCGYC	1 cut(s)	814
Hsp92II	CATG	8 cut(s)	49, 316, 490, 835, 943, 1310, 1381, 1427
HspAI	GCGC	5 cut(s)	319, 510, 764, 1255, 1382
Ksp22I	TGATCA	2 cut(s)	1309, 1420
Kzo9I	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
LguI	GCTCTTC	1 cut(s)	1275
LmnI	GCTCC	4 cut(s)	10, 124, 467, 1007
LweI	GCATC	4 cut(s)	775, 1045, 1176, 1542
MaeI	CTAG	3 cut(s)	624, 735, 1100
MaeII	ACGT	1 cut(s)	814
MaeIII	GTNAC	9 cut(s)	112, 395, 524, 607, 730, 949, 1027, 1177, 1297
MalI	GATC	5 cut(s)	417, 1265, 1311, 1422, 1510
MboI	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
MboII	GAAGA	8 cut(s)	218, 801, 848, 947, 1130, 1223, 1292, 1491
MflI	RGATCY	2 cut(s)	415, 1263
MhlI	GDGCHC	2 cut(s)	383, 464
MlsI	TGGCCA	1 cut(s)	491
MluCI	AATT	9 cut(s)	16, 717, 962, 1183, 1324, 1363, 1372, 1389, 1410
MluNI	TGGCCA	1 cut(s)	491
MlyI	GAGTC	7 cut(s)	80, 86, 302, 344, 470, 490, 545
MmeI	TCCRAC	2 cut(s)	725, 1480
Mox20I	TGGCCA	1 cut(s)	491
MscI	TGGCCA	1 cut(s)	491
MseI	TTAA	2 cut(s)	35, 1259
MslI	CAYNNNNRTG	1 cut(s)	50
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	3 cut(s)	110, 783, 1589
MspI	CCGG	1 cut(s)	8
MspR9I	CCNGG	4 cut(s)	377, 413, 493, 805
MvaI	CCWGG	4 cut(s)	377, 413, 493, 805
NcoI	CCATGG	4 cut(s)	45, 312, 486, 1377
NdeI	CATATG	1 cut(s)	1417
NdeII	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
NlaIII	CATG	8 cut(s)	49, 316, 490, 835, 943, 1310, 1381, 1427
NlaIV	GGNNCC	4 cut(s)	6, 437, 463, 885
NmeAIII	GCCGAG	3 cut(s)	362, 458, 538
NmuCI	GTSAC	5 cut(s)	395, 524, 607, 949, 1297
PaeR7I	CTCGAG	2 cut(s)	290, 562
PceI	AGGCCT	1 cut(s)	1136
PciSI	GCTCTTC	1 cut(s)	1275
PcsI	WCGNNNNNNNCGW	3 cut(s)	350, 510, 536
PfeI	GAWTC	6 cut(s)	236, 280, 640, 1195, 1274, 1496
PflMI	CCANNNNNTGG	1 cut(s)	162
PleI	GAGTC	7 cut(s)	79, 85, 302, 344, 470, 490, 544
PpsI	GAGTC	7 cut(s)	79, 85, 302, 344, 470, 490, 544
PpuMI	RGGWCCY	2 cut(s)	60, 884
Psp5II	RGGWCCY	2 cut(s)	60, 884
Psp6I	CCWGG	4 cut(s)	375, 411, 491, 803
PspEI	GGTNACC	1 cut(s)	395
PspFI	CCCAGC	2 cut(s)	1079, 1557
PspGI	CCWGG	4 cut(s)	375, 411, 491, 803
PspN4I	GGNNCC	4 cut(s)	6, 437, 463, 885
PspPI	GGNCC	2 cut(s)	60, 884
PspPPI	RGGWCCY	2 cut(s)	60, 884
PspXI	VCTCGAGB	1 cut(s)	290
PstI	CTGCAG	1 cut(s)	1432
PsuI	RGATCY	2 cut(s)	415, 1263
PvuII	CAGCTG	2 cut(s)	783, 1589
RsaI	GTAC	3 cut(s)	628, 1019, 1613
RsaNI	GTAC	3 cut(s)	627, 1018, 1612
RseI	CAYNNNNRTG	1 cut(s)	50
SapI	GCTCTTC	1 cut(s)	1275
SaqAI	TTAA	2 cut(s)	35, 1259
Sau3AI	GATC	5 cut(s)	415, 1263, 1309, 1420, 1508
Sau96I	GGNCC	2 cut(s)	60, 884
ScaI	AGTACT	1 cut(s)	628
SchI	GAGTC	7 cut(s)	80, 86, 302, 344, 470, 490, 545
ScrFI	CCNGG	4 cut(s)	377, 413, 493, 805
SduI	GDGCHC	2 cut(s)	383, 464
SfaNI	GCATC	4 cut(s)	775, 1045, 1176, 1542
SfcI	CTRYAG	2 cut(s)	784, 1428
SfiI	GGCCNNNNNGGCC	1 cut(s)	488
Sfr274I	CTCGAG	2 cut(s)	290, 562
SinI	GGWCC	2 cut(s)	60, 884
SlaI	CTCGAG	2 cut(s)	290, 562
SmiMI	CAYNNNNRTG	1 cut(s)	50
SmlI	CTYRAG	3 cut(s)	290, 419, 562
SmoI	CTYRAG	3 cut(s)	290, 419, 562
SpeI	ACTAGT	1 cut(s)	623
Sse9I	AATT	9 cut(s)	16, 717, 962, 1183, 1324, 1363, 1372, 1389, 1410
SseBI	AGGCCT	1 cut(s)	1136
SsiI	CCGC	3 cut(s)	105, 108, 662
SspMI	CTAG	3 cut(s)	624, 735, 1100
StuI	AGGCCT	1 cut(s)	1136
StyD4I	CCNGG	4 cut(s)	375, 411, 491, 803
StyI	CCWWGG	5 cut(s)	45, 312, 486, 1099, 1377
TaaI	ACNGT	1 cut(s)	1461
TaiI	ACGT	1 cut(s)	817
TaqI	TCGA	9 cut(s)	141, 255, 291, 471, 539, 563, 638, 1188, 1198
TasI	AATT	9 cut(s)	16, 717, 962, 1183, 1324, 1363, 1372, 1389, 1410
TatI	WGTACW	1 cut(s)	626
TauI	GCSGC	1 cut(s)	110
TfiI	GAWTC	6 cut(s)	236, 280, 640, 1195, 1274, 1496
Tru1I	TTAA	2 cut(s)	35, 1259
Tru9I	TTAA	2 cut(s)	35, 1259
TscAI	CASTG	3 cut(s)	676, 1337, 1345
TseFI	GTSAC	5 cut(s)	395, 524, 607, 949, 1297
Tsp45I	GTSAC	5 cut(s)	395, 524, 607, 949, 1297
TspDTI	ATGAA	6 cut(s)	241, 774, 955, 956, 1208, 1617
TspGWI	ACGGA	2 cut(s)	209, 353
TspRI	CASTG	3 cut(s)	676, 1337, 1345
Van91I	CCANNNNNTGG	1 cut(s)	162
VpaK11BI	GGWCC	2 cut(s)	60, 884
XapI	RAATTY	4 cut(s)	962, 1183, 1324, 1410
XhoI	CTCGAG	2 cut(s)	290, 562
XmaJI	CCTAGG	1 cut(s)	1099
XspI	CTAG	3 cut(s)	624, 735, 1100
ZraI	GACGTC	1 cut(s)	815
ZrmI	AGTACT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.