Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001864

Physical Location & Seq

Genomic Coordinates Reverse (-)

31238676 .. 31243815

Gene Structure 5140 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1310900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGCTCCAGCGAGCAATTGGTTGTCCTTCTCTCTCATGTCTCCCATGGAAATGCTGAGGTCCTCTGAGTCCGATCAATCTCCCTTCGTCCCTTACGACGCGTCCTCCGCCGCCTCCCCCCACTACTTCCTCGACAACTTCTATGCCAGCAACGGGTGGCAGACGAACCCAAAATCCCAAGTGTTTTTCACAGACGGTGAGGATCAAAGCAAGCAACAAGGCCAGTCCGATTCGCCGAATCTGTCACCGTTCGTCGACCCACAGAGCCATACCCAGCACATCCCGAAGCTCGAGGACTTTCTCGGCGATTCGTCATCAATGGTGCGCTATTCCAATAGCCAAACAGAGACCCAGGACTCATCGTCCCTGACCCACATGTACGACCAGAGTTCCACCTACTTCGGCGGCGACCACCAACAGCAGGAAGATCTCAAGGCGATTACCGGGTTCCAAGCCTTTTCGACCAACTCGGGCTCGGAGGTGGAGGACTCCGCGTCCATGGCCCGGACGACTCAGCATCAGCAGCAGCTCGCTTGCGCCGAGTTCGGGGGTCATTCCATTGAGTCGAACGGGAACGAGTTGGGGGTCTACAACTCCAGCTGCAGGACGAATGCTTTGTCGCTTGGAGTCACCACCACTCAAAGCTCTTCCGATCAGAAGAAGGCCATTGTCGCCGTCGACAACGACGGCTCAAAGAAGATTGCTGATACTTTTGGTCAGAGGACTTCGATTTACAGAGGGGTCACCAGACACCGGTGGACGGGTAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGATAAGGCAGCAAGGGCTTATGATTTGGCTGCTCTCAAATACTGGGGTCCTACCGCGACCACCAACTTCCCTGTTTCAACTTACAGCAAAGAACTGGAAGATATGCAGCATATGACCAAGCAAGAATTCATTGCCTCTCTCAGAAGGAAAAGCAGTGGTTTTTCAAGAGGTGCTTCTATTTACAGAGGGGTTACAAGGCATCATCAACAAGGCAGATGGCAAGCAAGAATAGGCCGTGTTGCCGGGAACAAAGACCTATACCTTGGAACATTCGCTACTGAAGAGGAGGCCGCTGAGGCGTATGATATAGCGGCCATAAAGTTTAGGGGTATTAATGCGGTTACAAATTTTGAGATGAACCGATACGACGTTGAAGCTATTGGCAAGAGTTCTCTTCCTGTTGGCGGGGCAGCAAAGCGCTTAAAGCTCTCACTCGAAGCAGAAGAGCAGAGACCATCTGTGAACCATGATCAGCAGCATCCTCAATGCAGCATTGGCAGCAACATCAATTTCACTTCCATGCAGCCAGTTCAATCCATACCATGTGGGATCCCATACGATGCTGCAGCTGCCAGCACTTACTATCACCACCTCTTCCACCAATTTCAACCCAACAACTATGGCGCGTCGGATTCAGCTGGACTAAACCCTAACATTGCAACTCAGATGAGCATGATGCCGCAGCAGCCAGCTGAGTTTTACATTTGGCCTAATCACCAATCCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003700 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009956 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010492 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0048364 GO:0048507 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060771 GO:0060772 GO:0060774 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

526

Amino Acids

58.32

Weight (kDa)

6.02

Isoelectric Point (pI)

57.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	245 - 299	4.9e-07	AP2 domain
AP2	PF00847	344 - 393	1.7e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G65510 AT5G65510 AT5G65510 AT5G65510
fragaria_vesca	FvH4_1g19530
malus_domestica	MD01G1040700.v1.1 MD15G1310900.v1.1
prunus_persica	Prupe.6G142500_v2.0.a1 Prupe.6G203000_v2.0.a1
pyrus_communis	pycom01g06820 pycom15g27450
rosa_chinensis	RchiOBHm_Chr2g0111031 RchiOBHm_Chr4g0405741
rosa_laevigata	RLG00000012851 RLG00000017859 RLG00000020876
rosa_multiflora	Rmu_co8195526.1_g000001 Rmu_sc0000041.1_g000014 Rmu_sc0003994.1_g000004
rosa_roxburghii	Rroxscaffold_2G00132730 Rroxscaffold_5G00366230
rosa_rugosa	Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700
rosa_samantha	Rh2AG222800 Rh2AG222900 Rh2BG234800 Rh2CG226300 Rh2DG230600 Rh2DG230700 Rh2DG399700 Rh4BG037900 Rh4CG141400 Rh6BG125200 Rh6CG051000 Rh7CG223000
rosa_wichuraiana	Rw2G017210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	255, 588, 678
AccII	CGCG	4 cut(s)	101, 494, 905, 1475
AclWI	GGATC	3 cut(s)	210, 1393, 1406
AcoI	YGGCCR	1 cut(s)	1161
AcsI	RAATTY	2 cut(s)	974, 1195
AcuI	CTGAAG	1 cut(s)	1149
AcyI	GRCGYC	1 cut(s)	826
AfaI	GTAC	1 cut(s)	380
AfeI	AGCGCT	1 cut(s)	1268
AfiI	CCNNNNNNNGG	9 cut(s)	153, 421, 504, 546, 603, 753, 760, 822, 1253
AflIII	ACRYGT	2 cut(s)	99, 375
AgeI	ACCGGT	1 cut(s)	753
AgsI	TTSAA	5 cut(s)	927, 1014, 1223, 1382, 1457
AhdI	GACNNNNNGTC	2 cut(s)	361, 493
AjnI	CCWGG	2 cut(s)	351, 815
AjuI	GAANNNNNNNTTGG	2 cut(s)	959, 991
AloI	GAACNNNNNNTCC	2 cut(s)	158, 190
Alw26I	GTCTC	3 cut(s)	45, 341, 1294
AlwI	GGATC	3 cut(s)	210, 1393, 1406
Ama87I	CYCGRG	2 cut(s)	290, 469
Aor51HI	AGCGCT	1 cut(s)	1268
AoxI	GGCC	8 cut(s)	220, 501, 663, 813, 1081, 1137, 1161, 1556
ApoI	RAATTY	2 cut(s)	974, 1195
ArsI	GACNNNNNNTTYG	4 cut(s)	598, 602, 630, 634
AseI	ATTAAT	1 cut(s)	1182
AsiGI	ACCGGT	1 cut(s)	753
AspLEI	GCGC	5 cut(s)	327, 539, 778, 1269, 1475
AspS9I	GGNCC	3 cut(s)	60, 502, 896
AsuC2I	CCSGG	3 cut(s)	445, 505, 1093
AsuHPI	GGTGA	6 cut(s)	209, 237, 622, 736, 1427, 1556
AvaI	CYCGRG	2 cut(s)	290, 469
AvaII	GGWCC	2 cut(s)	60, 896
BamHI	GGATCC	1 cut(s)	1398
BanII	GRGCYC	1 cut(s)	476
BbvCI	CCTCAGC	2 cut(s)	56, 1143
BccI	CCATC	2 cut(s)	1059, 1312
BceAI	ACGGC	3 cut(s)	659, 703, 1068
BciT130I	CCWGG	2 cut(s)	353, 817
BclI	TGATCA	1 cut(s)	1318
BcnI	CCSGG	3 cut(s)	445, 505, 1093
BcoDI	GTCTC	3 cut(s)	45, 341, 1294
BfmI	CTRYAG	3 cut(s)	601, 796, 1413
BfoI	RGCGCY	1 cut(s)	1270
BglI	GCCNNNNNGGC	1 cut(s)	1145
BglII	AGATCT	1 cut(s)	427
Bme1390I	CCNGG	5 cut(s)	353, 445, 505, 817, 1093
Bme18I	GGWCC	2 cut(s)	60, 896
BmeRI	GACNNNNNGTC	2 cut(s)	361, 493
BmeT110I	CYCGRG	2 cut(s)	290, 469
BmgT120I	GGNCC	3 cut(s)	60, 502, 896
BmiI	GGNNCC	4 cut(s)	6, 449, 897, 1400
BmrFI	CCNGG	5 cut(s)	353, 445, 505, 817, 1093
BmrI	ACTGGG	1 cut(s)	901
BmsI	GCATC	6 cut(s)	526, 787, 1057, 1336, 1399, 1515
BmuI	ACTGGG	1 cut(s)	901
BpmI	CTGGAG	1 cut(s)	580
Bpu10I	CCTNAGC	2 cut(s)	56, 1143
BpuEI	CTTGAG	1 cut(s)	416
BpuMI	CCSGG	3 cut(s)	445, 505, 1093
BsaHI	GRCGYC	1 cut(s)	826
BsaI	GGTCTC	2 cut(s)	341, 1294
BsaJI	CCNNGG	4 cut(s)	45, 351, 498, 1111
BsaWI	WCCGGW	1 cut(s)	753
BsaXI	ACNNNNNCTCC	2 cut(s)	89, 119
Bsc4I	CCNNNNNNNGG	9 cut(s)	153, 421, 504, 546, 603, 753, 760, 822, 1253
Bse118I	RCCGGY	1 cut(s)	753
Bse1I	ACTGG	4 cut(s)	223, 896, 948, 1376
Bse3DI	GCAATG	2 cut(s)	978, 1503
BseBI	CCWGG	2 cut(s)	353, 817
BseDI	CCNNGG	4 cut(s)	45, 351, 498, 1111
BseGI	GGATG	2 cut(s)	279, 1327
BseLI	CCNNNNNNNGG	9 cut(s)	153, 421, 504, 546, 603, 753, 760, 822, 1253
BseMI	GCAATG	2 cut(s)	978, 1503
BseMII	CTCAG	7 cut(s)	47, 57, 527, 1003, 1134, 1526, 1533
BseNI	ACTGG	4 cut(s)	223, 896, 948, 1376
BseRI	GAGGAG	1 cut(s)	1148
BseYI	CCCAGC	1 cut(s)	273
Bsh1236I	CGCG	4 cut(s)	101, 494, 905, 1475
BshFI	GGCC	8 cut(s)	222, 503, 665, 815, 1083, 1139, 1163, 1558
BshTI	ACCGGT	1 cut(s)	753
BsiHKCI	CYCGRG	2 cut(s)	290, 469
BsiSI	CCGG	4 cut(s)	444, 505, 754, 1092
BslFI	GGGAC	2 cut(s)	74, 349
BslI	CCNNNNNNNGG	9 cut(s)	153, 421, 504, 546, 603, 753, 760, 822, 1253
BsmAI	GTCTC	3 cut(s)	45, 341, 1294
BsmFI	GGGAC	2 cut(s)	74, 349
BsmI	GAATGC	1 cut(s)	616
BsnI	GGCC	8 cut(s)	222, 503, 665, 815, 1083, 1139, 1163, 1558
Bso31I	GGTCTC	2 cut(s)	341, 1294
BsoBI	CYCGRG	2 cut(s)	290, 469
Bsp1286I	GDGCHC	1 cut(s)	476
Bsp143I	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
Bsp19I	CCATGG	2 cut(s)	45, 498
BspANI	GGCC	8 cut(s)	222, 503, 665, 815, 1083, 1139, 1163, 1558
BspCNI	CTCAG	7 cut(s)	48, 58, 526, 1002, 1135, 1525, 1534
BspFNI	CGCG	4 cut(s)	101, 494, 905, 1475
BspLI	GGNNCC	4 cut(s)	6, 449, 897, 1400
BspMAI	CTGCAG	2 cut(s)	605, 1417
BspPI	GGATC	3 cut(s)	210, 1393, 1406
BspQI	GCTCTTC	2 cut(s)	652, 1287
BspTNI	GGTCTC	2 cut(s)	341, 1294
BsrDI	GCAATG	2 cut(s)	978, 1503
BsrFI	RCCGGY	1 cut(s)	753
BsrI	ACTGG	4 cut(s)	223, 896, 948, 1376
BssAI	RCCGGY	1 cut(s)	753
BssECI	CCNNGG	4 cut(s)	45, 351, 498, 1111
BssMI	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
BssNI	GRCGYC	1 cut(s)	826
BssT1I	CCWWGG	3 cut(s)	45, 498, 1111
Bst2UI	CCWGG	2 cut(s)	353, 817
Bst4CI	ACNGT	2 cut(s)	197, 249
Bst6I	CTCTTC	6 cut(s)	652, 796, 1125, 1248, 1287, 1448
BstACI	GRCGYC	1 cut(s)	826
BstC8I	GCNNGC	8 cut(s)	13, 148, 212, 531, 535, 1071, 1423, 1539
BstDEI	CTNAG	7 cut(s)	56, 66, 513, 989, 1143, 1512, 1542
BstDSI	CCRYGG	2 cut(s)	45, 498
BstEII	GGTNACC	1 cut(s)	742
BstF5I	GGATG	2 cut(s)	279, 1327
BstFNI	CGCG	4 cut(s)	101, 494, 905, 1475
BstH2I	RGCGCY	1 cut(s)	1270
BstHHI	GCGC	5 cut(s)	327, 539, 778, 1269, 1475
BstKTI	GATC	6 cut(s)	76, 205, 430, 655, 1321, 1401
BstMAI	GTCTC	3 cut(s)	45, 341, 1294
BstMBI	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
BstNI	CCWGG	2 cut(s)	353, 817
BstNSI	RCATGY	1 cut(s)	379
BstPI	GGTNACC	1 cut(s)	742
BstSCI	CCNGG	5 cut(s)	351, 443, 503, 815, 1091
BstSFI	CTRYAG	3 cut(s)	601, 796, 1413
BstUI	CGCG	4 cut(s)	101, 494, 905, 1475
BstX2I	RGATCY	2 cut(s)	427, 1398
BstYI	RGATCY	2 cut(s)	427, 1398
BsuRI	GGCC	8 cut(s)	222, 503, 665, 815, 1083, 1139, 1163, 1558
BtgI	CCRYGG	2 cut(s)	45, 498
BtsCI	GGATG	2 cut(s)	279, 1327
BtsI	GCAGTG	1 cut(s)	1009
BtsIMutI	CAGTG	1 cut(s)	1009
Cac8I	GCNNGC	8 cut(s)	13, 148, 212, 531, 535, 1071, 1423, 1539
CfoI	GCGC	5 cut(s)	327, 539, 778, 1269, 1475
Cfr10I	RCCGGY	1 cut(s)	753
Cfr13I	GGNCC	3 cut(s)	60, 502, 896
CseI	GACGC	5 cut(s)	90, 107, 483, 815, 1464
Csp6I	GTAC	1 cut(s)	379
CspAI	ACCGGT	1 cut(s)	753
CviAII	CATG	8 cut(s)	37, 46, 376, 499, 1316, 1369, 1392, 1522
CviQI	GTAC	1 cut(s)	379
DdeI	CTNAG	7 cut(s)	56, 66, 513, 989, 1143, 1512, 1542
DpnI	GATC	6 cut(s)	75, 204, 429, 654, 1320, 1400
DpnII	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
DriI	GACNNNNNGTC	2 cut(s)	361, 493
EaeI	YGGCCR	1 cut(s)	1161
Eam1104I	CTCTTC	6 cut(s)	652, 796, 1125, 1248, 1287, 1448
Eam1105I	GACNNNNNGTC	2 cut(s)	361, 493
EarI	CTCTTC	6 cut(s)	652, 796, 1125, 1248, 1287, 1448
EciI	GGCGGA	1 cut(s)	97
Eco130I	CCWWGG	3 cut(s)	45, 498, 1111
Eco24I	GRGCYC	1 cut(s)	476
Eco31I	GGTCTC	2 cut(s)	341, 1294
Eco47I	GGWCC	2 cut(s)	60, 896
Eco47III	AGCGCT	1 cut(s)	1268
Eco57I	CTGAAG	1 cut(s)	1149
Eco88I	CYCGRG	2 cut(s)	290, 469
Eco91I	GGTNACC	1 cut(s)	742
EcoO109I	RGGNCCY	2 cut(s)	60, 896
EcoO65I	GGTNACC	1 cut(s)	742
EcoRI	GAATTC	1 cut(s)	974
EcoRII	CCWGG	2 cut(s)	351, 815
EcoT14I	CCWWGG	3 cut(s)	45, 498, 1111
EcoT38I	GRGCYC	1 cut(s)	476
ErhI	CCWWGG	3 cut(s)	45, 498, 1111
FaeI	CATG	8 cut(s)	40, 49, 379, 502, 1319, 1372, 1395, 1525
FalI	AAGNNNNNCTT	2 cut(s)	1006, 1038
FaqI	GGGAC	2 cut(s)	74, 349
FatI	CATG	8 cut(s)	36, 45, 375, 498, 1315, 1368, 1391, 1521
FauI	CCCGC	1 cut(s)	1247
FauNDI	CATATG	1 cut(s)	960
FbaI	TGATCA	1 cut(s)	1318
FblI	GTMKAC	3 cut(s)	255, 588, 678
FokI	GGATG	2 cut(s)	266, 1314
FriOI	GRGCYC	1 cut(s)	476
GlaI	GCGC	5 cut(s)	326, 538, 777, 1268, 1474
GsaI	CCCAGC	1 cut(s)	277
GsuI	CTGGAG	1 cut(s)	580
HaeII	RGCGCY	1 cut(s)	1270
HaeIII	GGCC	8 cut(s)	222, 503, 665, 815, 1083, 1139, 1163, 1558
HapII	CCGG	4 cut(s)	444, 505, 754, 1092
HgaI	GACGC	5 cut(s)	90, 107, 483, 815, 1464
HhaI	GCGC	5 cut(s)	327, 539, 778, 1269, 1475
Hin1I	GRCGYC	1 cut(s)	826
Hin1II	CATG	8 cut(s)	40, 49, 379, 502, 1319, 1372, 1395, 1525
Hin6I	GCGC	5 cut(s)	325, 537, 776, 1267, 1473
HinP1I	GCGC	5 cut(s)	325, 537, 776, 1267, 1473
HincII	GTYRAC	2 cut(s)	256, 679
HindII	GTYRAC	2 cut(s)	256, 679
HpaII	CCGG	4 cut(s)	444, 505, 754, 1092
HphI	GGTGA	6 cut(s)	209, 237, 622, 736, 1427, 1556
Hpy166II	GTNNAC	5 cut(s)	256, 589, 679, 759, 1312
Hpy188III	TCNNGA	2 cut(s)	283, 1014
Hpy8I	GTNNAC	5 cut(s)	256, 589, 679, 759, 1312
Hpy99I	CGWCG	6 cut(s)	101, 257, 680, 689, 1220, 1480
HpyAV	CCTTC	4 cut(s)	37, 94, 655, 987
HpyCH4III	ACNGT	2 cut(s)	197, 249
HpyCH4IV	ACGT	1 cut(s)	1218
HpyCH4V	TGCA	6 cut(s)	603, 955, 1338, 1372, 1415, 1508
HpyF3I	CTNAG	7 cut(s)	56, 66, 513, 989, 1143, 1512, 1542
HpySE526I	ACGT	1 cut(s)	1218
Hsp92I	GRCGYC	1 cut(s)	826
Hsp92II	CATG	8 cut(s)	40, 49, 379, 502, 1319, 1372, 1395, 1525
HspAI	GCGC	5 cut(s)	325, 537, 776, 1267, 1473
Ksp22I	TGATCA	1 cut(s)	1318
Kzo9I	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
LguI	GCTCTTC	2 cut(s)	652, 1287
LmnI	GCTCC	1 cut(s)	10
LweI	GCATC	6 cut(s)	526, 787, 1057, 1336, 1399, 1515
MaeII	ACGT	1 cut(s)	1218
MaeIII	GTNAC	5 cut(s)	243, 628, 742, 1039, 1189
MalI	GATC	6 cut(s)	75, 204, 429, 654, 1320, 1400
MboI	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
MfeI	CAATTG	1 cut(s)	16
MflI	RGATCY	2 cut(s)	427, 1398
MhlI	GDGCHC	1 cut(s)	476
MluCI	AATT	5 cut(s)	16, 974, 1195, 1357, 1451
MluI	ACGCGT	1 cut(s)	99
MlyI	GAGTC	6 cut(s)	77, 350, 482, 505, 572, 636
MmeI	TCCRAC	1 cut(s)	1458
MseI	TTAA	2 cut(s)	1182, 1271
MslI	CAYNNNNRTG	2 cut(s)	50, 1367
MspA1I	CMGCKG	6 cut(s)	600, 795, 1142, 1418, 1487, 1541
MspI	CCGG	4 cut(s)	444, 505, 754, 1092
MspR9I	CCNGG	5 cut(s)	353, 445, 505, 817, 1093
MunI	CAATTG	1 cut(s)	16
Mva1269I	GAATGC	1 cut(s)	616
MvaI	CCWGG	2 cut(s)	353, 817
MvnI	CGCG	4 cut(s)	101, 494, 905, 1475
NciI	CCSGG	3 cut(s)	445, 505, 1093
NcoI	CCATGG	2 cut(s)	45, 498
NdeI	CATATG	1 cut(s)	960
NdeII	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
NlaIII	CATG	8 cut(s)	40, 49, 379, 502, 1319, 1372, 1395, 1525
NlaIV	GGNNCC	4 cut(s)	6, 449, 897, 1400
NmeAIII	GCCGAG	2 cut(s)	282, 565
NmuCI	GTSAC	3 cut(s)	243, 628, 742
NspI	RCATGY	1 cut(s)	379
PaeR7I	CTCGAG	1 cut(s)	290
PciI	ACATGT	1 cut(s)	375
PciSI	GCTCTTC	2 cut(s)	652, 1287
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 537
PctI	GAATGC	1 cut(s)	616
PfeI	GAWTC	4 cut(s)	230, 238, 308, 1481
PinAI	ACCGGT	1 cut(s)	753
PleI	GAGTC	6 cut(s)	76, 350, 482, 505, 571, 635
PpsI	GAGTC	6 cut(s)	76, 350, 482, 505, 571, 635
PpuMI	RGGWCCY	2 cut(s)	60, 896
PscI	ACATGT	1 cut(s)	375
PshBI	ATTAAT	1 cut(s)	1182
Psp5II	RGGWCCY	2 cut(s)	60, 896
Psp6I	CCWGG	2 cut(s)	351, 815
PspEI	GGTNACC	1 cut(s)	742
PspFI	CCCAGC	1 cut(s)	273
PspGI	CCWGG	2 cut(s)	351, 815
PspN4I	GGNNCC	4 cut(s)	6, 449, 897, 1400
PspPI	GGNCC	3 cut(s)	60, 502, 896
PspPPI	RGGWCCY	2 cut(s)	60, 896
PspXI	VCTCGAGB	1 cut(s)	290
PsrI	GAACNNNNNNTAC	2 cut(s)	1108, 1140
PstI	CTGCAG	2 cut(s)	605, 1417
PsuI	RGATCY	2 cut(s)	427, 1398
PvuII	CAGCTG	5 cut(s)	600, 795, 1418, 1487, 1541
RsaI	GTAC	1 cut(s)	380
RsaNI	GTAC	1 cut(s)	379
RseI	CAYNNNNRTG	2 cut(s)	50, 1367
SalI	GTCGAC	2 cut(s)	254, 677
SapI	GCTCTTC	2 cut(s)	652, 1287
SaqAI	TTAA	2 cut(s)	1182, 1271
Sau3AI	GATC	6 cut(s)	73, 202, 427, 652, 1318, 1398
Sau96I	GGNCC	3 cut(s)	60, 502, 896
SchI	GAGTC	6 cut(s)	77, 350, 482, 505, 572, 636
ScrFI	CCNGG	5 cut(s)	353, 445, 505, 817, 1093
SduI	GDGCHC	1 cut(s)	476
SfaNI	GCATC	6 cut(s)	526, 787, 1057, 1336, 1399, 1515
SfcI	CTRYAG	3 cut(s)	601, 796, 1413
Sfr274I	CTCGAG	1 cut(s)	290
SgrAI	CRCCGGYG	1 cut(s)	753
SinI	GGWCC	2 cut(s)	60, 896
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	2 cut(s)	50, 1367
SmlI	CTYRAG	2 cut(s)	290, 431
SmoI	CTYRAG	2 cut(s)	290, 431
Sse9I	AATT	5 cut(s)	16, 974, 1195, 1357, 1451
StyD4I	CCNGG	5 cut(s)	351, 443, 503, 815, 1091
StyI	CCWWGG	3 cut(s)	45, 498, 1111
TaaI	ACNGT	2 cut(s)	197, 249
TaiI	ACGT	1 cut(s)	1221
TaqI	TCGA	8 cut(s)	132, 255, 291, 461, 566, 678, 728, 1284
TasI	AATT	5 cut(s)	16, 974, 1195, 1357, 1451
TauI	GCSGC	5 cut(s)	113, 408, 1142, 1163, 1531
TfiI	GAWTC	4 cut(s)	230, 238, 308, 1481
Tru1I	TTAA	2 cut(s)	1182, 1271
Tru9I	TTAA	2 cut(s)	1182, 1271
TscAI	CASTG	1 cut(s)	1009
TseFI	GTSAC	3 cut(s)	243, 628, 742
Tsp45I	GTSAC	3 cut(s)	243, 628, 742
TspDTI	ATGAA	3 cut(s)	786, 967, 1220
TspRI	CASTG	1 cut(s)	1009
VpaK11BI	GGWCC	2 cut(s)	60, 896
VspI	ATTAAT	1 cut(s)	1182
XapI	RAATTY	2 cut(s)	974, 1195
XceI	RCATGY	1 cut(s)	379
XcmI	CCANNNNNNNNNTGG	1 cut(s)	15
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	3 cut(s)	255, 588, 678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.