FvH4_1g13090

RING-type E3 ubiquitin transferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7208023 .. 7213208
5186 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g13090.t2

Sequence Viewer

Length: 2310 bp
ATGGGTACCAATGCTGCTGAAGAAGTAGAGACAGTGAGAAAGCCTTGTTCCTTTAAGGTTCACCATTCGATGTGCATTGAACTTTGGAAGTTGGTGGAGAGAATTTCAGAGATATTTCCTGACATAGAAGCAGCAAGACCTCGTTGCTCAACAGGAATACAGGCTCTATGCATGTTAAATTGTGCAATTCAGAAAGCCAAGCAACTCGTTCAGTATTGCAATGAATCTAGCAAACTCTACCTGGCATTGACAGGGGATAAGATAGTTTCAAGATGTCAAAAATCAAGGAACTTGTTGGAGCAAAGTTTGTGCCAGATTCAGAGTTGGGTTCCAGTGATTTTGGTGGCAGAGATCTCTAAAATTGTTGATGATCTTAAGGCTGCAACATTTAAACTGGATCCATCTGAAGATGAGGCTGGGAAGGTTGTCCGAGAATTGCTCCACCAAGGTGCTTCTGCATCAGATTCAATAGAACATTCTGAACTCAAGGCTCTTAAGCTTGCATTTGTGAGGCTCCATATTACCACATCAAAGGAAGTCTTAATAGAGAAAAGATCTATTAAGAAGTTGCTACAAAAAGTTGGTGACAGTGACCCTCGAAAAAAGCAGATCTTGACATATTTCTTGTATCTATTCAGGAAGTATGGAAACTCAGTAGTTTCAAACAAAACAGAGAGTGCCCCTGTGTGGCAACAAGGATCACTTGCTTCTGAGAATTTTGGCAGAGACTTGGGATATAATCAGCGTGCTGAAGTTAAACCTCACACAGGTTATGGGGAGTATGTAGCACAAAGTAACATGTTGCTTAGAGCTGAACCTCCTGAGGAGTTTTTATGTGGAATATCTTCCAGATTGATGTACGATCCTGTTGTCATTGCTTCTGGACAAACATATGAAAGGATGTGGATACAAAAGTGGTTTGATGAGGGAAATGATACATGCCCAAAAACTAATACCAAACTGGCCCACCTTTCATTGACTCCAAATGTTTCCATGAGGCAATTAACATCAAGATGGTGTACGAAGTATGGAATCACCATTCTTAACCCAAGTATGCAACCAGAAGCACTTAGCTCATGGGAGAACTCTTCCACTTCCATTGCTAGTTTAGGCAGTTCTATGAATGATCTACGTCTACAAATGGATCTCAGTGCTATGTCATTTGGATCCTTAGATACTAGTTTCAATTCTAAGACAGAAGATGGCTCAAGTCTGGTGCAGATTGATGATGATTCTCTGAAATACCGATATACTAAACAATGTGAGACAAATTTGGAATTTTTATCTAATATTAGTGAGCTCAAATGGGATTCTCAATGCAAGGCTGTTGAAGATGTTCAAAACCGTTTGAAATGCAATCCTCAAGCTTCTTATGAAATGTCCTCCAAGAATTTTGTTACACCTCTCATCAAATTTGTAAGGGATGCATATGATCAGGATGATGTAGAGGCTCAGAGACATGGATTTGAATTATTATCTACCTTTGTGAGAAAAAACAGAAATGGAATATCCTATTTATGTGAAGACGCGTACACTCTGTTAGTATCTTCTCTTGATTCAAAGGTAAAGGAAGAAGGTCTTGGCATAATGGAAATTCTGTCCGTCCACCAGGATTGCAGTGGTAACATCTCATCATCTGGTGCACTTACTGCCATTCTAAAACTTCTCGACTCCCAGATCAGTAGTATACAAGGAAAAGCTCTTAAAGTTTTGTACAATTTGTCAATCAATAGAGATATCTGTTCAGAGATGGTATCTATGGAGTGCATCCCAAAATTGGTTCCTTTCTTTCAAGACAGTGCTCTAAGTGGAAATTGTATCTCCATATTGAGAAATCTGTGCGATTCTGAAGCAGCCAGGACTGCTATTGCTGAAACTGATGGGTGCATTGCTTCTATTGTGGAAGTCCTAGAGTCTGGCAGTAAAGAGCATCAAGAGCATGCTGTTGATATCCTCCTTTCTTTATGCTCTCAACGCATTGACTATTGTCGTTTGGTCATGCATGAGGGAGTTATTCCTGCTCTTGTCCATTCATCTACCAATGGGACAGAGAGAGCACAGATAAACGCAATGGAAGTTCTACGTCTCTTGAGAGATATTGATTATGTCCCTGAGCAAGAATCTGCTGAACCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGGCACCTATAGATGAGCTACCTAGAGACAATGGAAATCATTCGAACGGGAAGAAAGCATCCAAGGTATCAGGTTTGTTTGGAAAGAAAATATCAATATTCTCAAAACCGAGTTCTCTTTCATCGAAGAAGAAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

770

Amino Acids

85.79

Weight (kDa)

5.66

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 251 - 318 3e-17 U-box domain
Arm_2 PF04826 489 - 587 1.3e-07 Armadillo-like
ARM_PUB PF25598 491 - 634 2.6e-10 Plant U-box protein ARM repeat region
KAP PF05804 507 - 623 4.6e-06 Kinesin-associated protein (KAP)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 2 cut(s) 5, 2173
AccI GTMKAC 2 cut(s) 1135, 1687
AccII CGCG 1 cut(s) 1529
AclWI GGATC 7 cut(s) 392, 405, 706, 857, 1152, 1161, 1174
AcsI RAATTY 7 cut(s) 102, 715, 1270, 1277, 1390, 1412, 1593
AcuI CTGAAG 4 cut(s) 39, 426, 771, 1869
AfaI GTAC 5 cut(s) 7, 860, 1021, 1532, 1715
AfiI CCNNNNNNNGG 3 cut(s) 687, 767, 1777
AflII CTTAAG 2 cut(s) 374, 494
AflIII ACRYGT 2 cut(s) 798, 1527
AhlI ACTAGT 1 cut(s) 1178
AjnI CCWGG 3 cut(s) 240, 1608, 1856
AjuI GAANNNNNNNTTGG 2 cut(s) 1563, 1595
AleI CACNNNNGTG 1 cut(s) 447
AluBI AGCT 7 cut(s) 499, 812, 1074, 1300, 1367, 1700, 2188
AluI AGCT 7 cut(s) 499, 812, 1074, 1300, 1367, 1700, 2188
Alw21I GWGCWC 4 cut(s) 1302, 1645, 1804, 2059
Alw26I GTCTC 6 cut(s) 23, 720, 1259, 1450, 2090, 2190
Alw44I GTGCAC 1 cut(s) 1641
AlwI GGATC 7 cut(s) 392, 405, 706, 857, 1152, 1161, 1174
AoxI GGCC 1 cut(s) 963
ApaLI GTGCAC 1 cut(s) 1641
ApeKI GCWGC 4 cut(s) 14, 131, 380, 1853
ApoI RAATTY 7 cut(s) 102, 715, 1270, 1277, 1390, 1412, 1593
Asp700I GAANNNNTTC 3 cut(s) 844, 1335, 2209
Asp718I GGTACC 1 cut(s) 5
AspS9I GGNCC 1 cut(s) 964
AsuHPI GGTGA 3 cut(s) 53, 596, 1027
AsuII TTCGAA 1 cut(s) 2213
AxyI CCTNAGG 2 cut(s) 822, 2169
BaeGI GKGCMC 2 cut(s) 682, 1645
BaeI ACNNNNGTAYC 2 cut(s) 899, 932
BamHI GGATCC 2 cut(s) 397, 1166
BanI GGYRCC 2 cut(s) 5, 2173
BanII GRGCYC 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 1530
Bbv12I GWGCWC 4 cut(s) 1302, 1645, 1804, 2059
BbvI GCAGC 3 cut(s) 143, 367, 1865
BccI CCATC 5 cut(s) 409, 1008, 1196, 1744, 1874
BciT130I CCWGG 3 cut(s) 242, 1610, 1858
BciVI GTATCC 1 cut(s) 900
BclI TGATCA 1 cut(s) 1432
BcoDI GTCTC 6 cut(s) 23, 720, 1259, 1450, 2090, 2190
BcuI ACTAGT 1 cut(s) 1178
BfaI CTAG 5 cut(s) 228, 1104, 1179, 1910, 2193
BfmI CTRYAG 1 cut(s) 2178
BfrI CTTAAG 2 cut(s) 374, 494
BfuI GTATCC 1 cut(s) 900
BglII AGATCT 3 cut(s) 351, 554, 609
BisI GCNGC 4 cut(s) 15, 132, 381, 1854
BlsI GCNGC 4 cut(s) 16, 133, 382, 1855
Bme1390I CCNGG 3 cut(s) 242, 1610, 1858
BmgT120I GGNCC 1 cut(s) 964
BmiI GGNNCC 7 cut(s) 7, 330, 399, 515, 1168, 1782, 2175
BmrFI CCNGG 3 cut(s) 242, 1610, 1858
BmsI GCATC 5 cut(s) 467, 1414, 1776, 1939, 2237
BoxI GACNNNNGTC 1 cut(s) 1986
BpiI GAAGAC 1 cut(s) 1530
BplI GAGNNNNNCTC 2 cut(s) 423, 455
Bpu10I CCTNAGC 7 cut(s) 2112, 2133, 2139, 2145, 2151, 2157, 2163
Bpu14I TTCGAA 1 cut(s) 2213
BpuEI CTTGAG 4 cut(s) 470, 1192, 1347, 2110
BsaJI CCNNGG 2 cut(s) 445, 2232
Bsc4I CCNNNNNNNGG 3 cut(s) 687, 767, 1777
Bse1I ACTGG 3 cut(s) 332, 399, 966
Bse21I CCTNAGG 2 cut(s) 822, 2169
Bse3DI GCAATG 5 cut(s) 226, 873, 1098, 1887, 2076
BseBI CCWGG 3 cut(s) 242, 1610, 1858
BseDI CCNNGG 2 cut(s) 445, 2232
BseGI GGATG 5 cut(s) 906, 1429, 1444, 1767, 2228
BseLI CCNNNNNNNGG 3 cut(s) 687, 767, 1777
BseMI GCAATG 5 cut(s) 226, 873, 1098, 1887, 2076
BseNI ACTGG 3 cut(s) 332, 399, 966
BseRI GAGGAG 1 cut(s) 839
BseSI GKGCMC 2 cut(s) 682, 1645
BseXI GCAGC 3 cut(s) 143, 367, 1865
BseYI CCCAGC 1 cut(s) 416
BsgI GTGCAG 1 cut(s) 1238
Bsh1236I CGCG 1 cut(s) 1529
BshFI GGCC 1 cut(s) 965
BshNI GGYRCC 2 cut(s) 5, 2173
BsiHKAI GWGCWC 4 cut(s) 1302, 1645, 1804, 2059
BslFI GGGAC 2 cut(s) 2059, 2093
BslI CCNNNNNNNGG 3 cut(s) 687, 767, 1777
BsmAI GTCTC 6 cut(s) 23, 720, 1259, 1450, 2090, 2190
BsmBI CGTCTC 1 cut(s) 2090
BsmFI GGGAC 2 cut(s) 2059, 2093
BsnI GGCC 1 cut(s) 965
Bsp119I TTCGAA 1 cut(s) 2213
Bsp1286I GDGCHC 5 cut(s) 682, 1302, 1645, 1804, 2059
Bsp1407I TGTACA 1 cut(s) 1713
BspANI GGCC 1 cut(s) 965
BspFNI CGCG 1 cut(s) 1529
BspLI GGNNCC 7 cut(s) 7, 330, 399, 515, 1168, 1782, 2175
BspPI GGATC 7 cut(s) 392, 405, 706, 857, 1152, 1161, 1174
BspT104I TTCGAA 1 cut(s) 2213
BspT107I GGYRCC 2 cut(s) 5, 2173
BspTI CTTAAG 2 cut(s) 374, 494
BsrDI GCAATG 5 cut(s) 226, 873, 1098, 1887, 2076
BsrGI TGTACA 1 cut(s) 1713
BsrI ACTGG 3 cut(s) 332, 399, 966
BssECI CCNNGG 2 cut(s) 445, 2232
BssNAI GTATAC 1 cut(s) 1688
BssT1I CCWWGG 2 cut(s) 445, 2232
Bst1107I GTATAC 1 cut(s) 1688
Bst2UI CCWGG 3 cut(s) 242, 1610, 1858
Bst4CI ACNGT 4 cut(s) 34, 590, 1346, 1799
Bst6I CTCTTC 1 cut(s) 1093
BstAFI CTTAAG 2 cut(s) 374, 494
BstAPI GCANNNNNTGC 1 cut(s) 1649
BstAUI TGTACA 1 cut(s) 1713
BstBI TTCGAA 1 cut(s) 2213
BstC8I GCNNGC 3 cut(s) 501, 747, 1941
BstENI CCTNNNNNAGG 1 cut(s) 765
BstF5I GGATG 5 cut(s) 906, 1429, 1444, 1767, 2228
BstFNI CGCG 1 cut(s) 1529
BstMAI GTCTC 6 cut(s) 23, 720, 1259, 1450, 2090, 2190
BstMWI GCNNNNNNNGC 4 cut(s) 1649, 1862, 1936, 1974
BstNI CCWGG 3 cut(s) 242, 1610, 1858
BstNSI RCATGY 4 cut(s) 175, 802, 942, 1943
BstPAI GACNNNNGTC 1 cut(s) 1986
BstSCI CCNGG 3 cut(s) 240, 1608, 1856
BstSFI CTRYAG 1 cut(s) 2178
BstSLI GKGCMC 2 cut(s) 682, 1645
BstUI CGCG 1 cut(s) 1529
BstV1I GCAGC 3 cut(s) 143, 367, 1865
BstV2I GAAGAC 1 cut(s) 1530
BstX2I RGATCY 6 cut(s) 351, 397, 554, 609, 1144, 1166
BstYI RGATCY 6 cut(s) 351, 397, 554, 609, 1144, 1166
BstZ17I GTATAC 1 cut(s) 1688
Bsu36I CCTNAGG 2 cut(s) 822, 2169
BsuI GTATCC 1 cut(s) 900
BsuRI GGCC 1 cut(s) 965
BtsCI GGATG 5 cut(s) 906, 1429, 1444, 1767, 2228
BtsI GCAGTG 1 cut(s) 1624
BtsIMutI CAGTG 6 cut(s) 39, 339, 595, 1156, 1624, 1804
Cac8I GCNNGC 3 cut(s) 501, 747, 1941
Cfr13I GGNCC 1 cut(s) 964
CseI GACGC 1 cut(s) 1535
Csp6I GTAC 5 cut(s) 6, 859, 1020, 1531, 1714
CspCI CAANNNNNGTGG 4 cut(s) 1081, 1116, 1595, 1630
CviAII CATG 9 cut(s) 172, 799, 939, 994, 1077, 1460, 1940, 1999, 2003
CviQI GTAC 5 cut(s) 6, 859, 1020, 1531, 1714
DraI TTTAAA 1 cut(s) 391
Eam1104I CTCTTC 1 cut(s) 1093
EarI CTCTTC 1 cut(s) 1093
Ecl136II GAGCTC 1 cut(s) 1300
Eco130I CCWWGG 2 cut(s) 445, 2232
Eco24I GRGCYC 1 cut(s) 1302
Eco32I GATATC 2 cut(s) 1738, 1951
Eco53kI GAGCTC 1 cut(s) 1300
Eco57I CTGAAG 4 cut(s) 39, 426, 771, 1869
Eco81I CCTNAGG 2 cut(s) 822, 2169
EcoICRI GAGCTC 1 cut(s) 1300
EcoNI CCTNNNNNAGG 1 cut(s) 765
EcoRII CCWGG 3 cut(s) 240, 1608, 1856
EcoRV GATATC 2 cut(s) 1738, 1951
EcoT14I CCWWGG 2 cut(s) 445, 2232
EcoT22I ATGCAT 3 cut(s) 173, 1429, 2004
EcoT38I GRGCYC 1 cut(s) 1302
ErhI CCWWGG 2 cut(s) 445, 2232
Esp3I CGTCTC 1 cut(s) 2090
FaeI CATG 9 cut(s) 175, 802, 942, 997, 1080, 1463, 1943, 2002, 2006
FalI AAGNNNNNCTT 8 cut(s) 524, 556, 596, 628, 687, 719, 1563, 1595
FaqI GGGAC 2 cut(s) 2059, 2093
FatI CATG 9 cut(s) 171, 798, 938, 993, 1076, 1459, 1939, 1998, 2002
FauNDI CATATG 2 cut(s) 892, 1429
FbaI TGATCA 1 cut(s) 1432
FblI GTMKAC 2 cut(s) 1135, 1687
Fnu4HI GCNGC 4 cut(s) 15, 132, 381, 1854
FokI GGATG 5 cut(s) 913, 1436, 1451, 1754, 2215
FriOI GRGCYC 1 cut(s) 1302
Fsp4HI GCNGC 4 cut(s) 15, 132, 381, 1854
FspBI CTAG 5 cut(s) 228, 1104, 1179, 1910, 2193
GluI GCNGC 4 cut(s) 15, 132, 381, 1854
GsaI CCCAGC 1 cut(s) 420
HaeIII GGCC 1 cut(s) 965
HgaI GACGC 1 cut(s) 1535
Hin1II CATG 9 cut(s) 175, 802, 942, 997, 1080, 1463, 1943, 2002, 2006
HindIII AAGCTT 2 cut(s) 497, 1365
HphI GGTGA 3 cut(s) 53, 596, 1027
Hpy166II GTNNAC 7 cut(s) 61, 1020, 1136, 1533, 1606, 1643, 1688
Hpy8I GTNNAC 7 cut(s) 61, 1020, 1136, 1533, 1606, 1643, 1688
HpyAV CCTTC 2 cut(s) 415, 1568
HpyCH4III ACNGT 4 cut(s) 34, 590, 1346, 1799
HpyCH4IV ACGT 2 cut(s) 1132, 2083
HpyF10VI GCNNNNNNNGC 4 cut(s) 1649, 1862, 1936, 1974
HpySE526I ACGT 2 cut(s) 1132, 2083
Hsp92II CATG 9 cut(s) 175, 802, 942, 997, 1080, 1463, 1943, 2002, 2006
KpnI GGTACC 1 cut(s) 9
Ksp22I TGATCA 1 cut(s) 1432
LmnI GCTCC 3 cut(s) 298, 444, 519
Lsp1109I GCAGC 3 cut(s) 143, 367, 1865
LweI GCATC 5 cut(s) 467, 1414, 1776, 1939, 2237
MaeI CTAG 5 cut(s) 228, 1104, 1179, 1910, 2193
MaeII ACGT 2 cut(s) 1132, 2083
MaeIII GTNAC 5 cut(s) 584, 590, 794, 1396, 1622
MflI RGATCY 6 cut(s) 351, 397, 554, 609, 1144, 1166
MhlI GDGCHC 5 cut(s) 682, 1302, 1645, 1804, 2059
MluI ACGCGT 1 cut(s) 1527
MlyI GAGTC 3 cut(s) 973, 1664, 1922
MmeI TCCRAC 1 cut(s) 276
Mph1103I ATGCAT 3 cut(s) 173, 1429, 2004
MroXI GAANNNNTTC 3 cut(s) 844, 1335, 2209
MslI CAYNNNNRTG 2 cut(s) 447, 1012
MspCI CTTAAG 2 cut(s) 374, 494
MspR9I CCNGG 3 cut(s) 242, 1610, 1858
MvaI CCWGG 3 cut(s) 242, 1610, 1858
MvnI CGCG 1 cut(s) 1529
MwoI GCNNNNNNNGC 4 cut(s) 1649, 1862, 1936, 1974
NdeI CATATG 2 cut(s) 892, 1429
NlaIII CATG 9 cut(s) 175, 802, 942, 997, 1080, 1463, 1943, 2002, 2006
NlaIV GGNNCC 7 cut(s) 7, 330, 399, 515, 1168, 1782, 2175
NmuCI GTSAC 2 cut(s) 584, 590
NsiI ATGCAT 3 cut(s) 173, 1429, 2004
NspI RCATGY 4 cut(s) 175, 802, 942, 1943
NspV TTCGAA 1 cut(s) 2213
OliI CACNNNNGTG 1 cut(s) 447
PaeI GCATGC 1 cut(s) 1943
PciI ACATGT 1 cut(s) 798
PdmI GAANNNNTTC 3 cut(s) 844, 1335, 2209
PfeI GAWTC 9 cut(s) 224, 316, 464, 1032, 1232, 1310, 1556, 1844, 2120
PkrI GCNGC 4 cut(s) 16, 133, 382, 1855
PleI GAGTC 3 cut(s) 973, 1664, 1921
PpsI GAGTC 3 cut(s) 973, 1664, 1921
PscI ACATGT 1 cut(s) 798
PshAI GACNNNNGTC 1 cut(s) 1986
Psp124BI GAGCTC 1 cut(s) 1302
Psp6I CCWGG 3 cut(s) 240, 1608, 1856
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 3 cut(s) 240, 1608, 1856
PspN4I GGNNCC 7 cut(s) 7, 330, 399, 515, 1168, 1782, 2175
PspPI GGNCC 1 cut(s) 964
PsuI RGATCY 6 cut(s) 351, 397, 554, 609, 1144, 1166
RsaI GTAC 5 cut(s) 7, 860, 1021, 1532, 1715
RsaNI GTAC 5 cut(s) 6, 859, 1020, 1531, 1714
RseI CAYNNNNRTG 2 cut(s) 447, 1012
SacI GAGCTC 1 cut(s) 1302
SatI GCNGC 4 cut(s) 15, 132, 381, 1854
Sau96I GGNCC 1 cut(s) 964
SchI GAGTC 3 cut(s) 973, 1664, 1922
ScrFI CCNGG 3 cut(s) 242, 1610, 1858
SduI GDGCHC 5 cut(s) 682, 1302, 1645, 1804, 2059
SfaNI GCATC 5 cut(s) 467, 1414, 1776, 1939, 2237
SfcI CTRYAG 1 cut(s) 2178
SfuI TTCGAA 1 cut(s) 2213
SmiMI CAYNNNNRTG 2 cut(s) 447, 1012
SmlI CTYRAG 6 cut(s) 374, 485, 494, 1207, 1362, 2089
SmoI CTYRAG 6 cut(s) 374, 485, 494, 1207, 1362, 2089
SpeI ACTAGT 1 cut(s) 1178
SphI GCATGC 1 cut(s) 1943
SspI AATATT 2 cut(s) 1291, 2268
SspMI CTAG 5 cut(s) 228, 1104, 1179, 1910, 2193
SstI GAGCTC 1 cut(s) 1302
StyD4I CCNGG 3 cut(s) 240, 1608, 1856
StyI CCWWGG 2 cut(s) 445, 2232
TaaI ACNGT 4 cut(s) 34, 590, 1346, 1799
TaiI ACGT 2 cut(s) 1135, 2086
TaqI TCGA 5 cut(s) 68, 598, 1668, 2213, 2294
TatI WGTACW 1 cut(s) 1713
TfiI GAWTC 9 cut(s) 224, 316, 464, 1032, 1232, 1310, 1556, 1844, 2120
TscAI CASTG 6 cut(s) 39, 339, 595, 1156, 1624, 1804
TseFI GTSAC 2 cut(s) 584, 590
TseI GCWGC 4 cut(s) 14, 131, 380, 1853
Tsp45I GTSAC 2 cut(s) 584, 590
TspDTI ATGAA 7 cut(s) 237, 909, 963, 1136, 1389, 2022, 2280
TspGWI ACGGA 1 cut(s) 1591
TspRI CASTG 6 cut(s) 39, 339, 595, 1156, 1624, 1804
Vha464I CTTAAG 2 cut(s) 374, 494
VneI GTGCAC 1 cut(s) 1641
XagI CCTNNNNNAGG 1 cut(s) 765
XapI RAATTY 7 cut(s) 102, 715, 1270, 1277, 1390, 1412, 1593
XceI RCATGY 4 cut(s) 175, 802, 942, 1943
XcmI CCANNNNNNNNNTGG 1 cut(s) 1616
XmiI GTMKAC 2 cut(s) 1135, 1687
XmnI GAANNNNTTC 3 cut(s) 844, 1335, 2209
XspI CTAG 5 cut(s) 228, 1104, 1179, 1910, 2193
Zsp2I ATGCAT 3 cut(s) 173, 1429, 2004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.