RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G36550 |
| fragaria_vesca | FvH4_1g13090 FvH4_1g13090 |
| malus_domestica | MD02G1145600.v1.1 MD15G1259700.v1.1 |
| prunus_persica | Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 |
| pyrus_communis | pycom02g11520 pycom15g22690 |
| rosa_chinensis | RchiOBHm_Chr2g0101271 RchiOBHm_Chr2g0104721 RchiOBHm_Chr2g0104731 |
| rosa_laevigata | RLG00000017066 RLG00000017354 |
| rosa_multiflora | Rmu_sc0006314.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00141450 |
| rosa_rugosa | Rorug02G0099600 Rorug02G0122000 Rorug02G0122100 Rorug02G0122200 |
| rosa_samantha | Rh2AG145600 Rh2AG172300 Rh2BG151000 Rh2BG179900 Rh2CG151400 Rh2CG177400 Rh2DG151100 Rh2DG178600 |
| rosa_wichuraiana | Rw0G008640 Rw0G008650 Rw2G011360 Rw2G013490 Rw2G013550 Rw2G013560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 16 |
| AcsI | RAATTY | 2 cut(s) | 120, 150 |
| AfaI | GTAC | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 190 |
| AgsI | TTSAA | 1 cut(s) | 227 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 50 |
| AoxI | GGCC | 2 cut(s) | 16, 112 |
| ApoI | RAATTY | 2 cut(s) | 120, 150 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 154 |
| AspLEI | GCGC | 1 cut(s) | 58 |
| BalI | TGGCCA | 1 cut(s) | 18 |
| BmiI | GGNNCC | 1 cut(s) | 195 |
| BmsI | GCATC | 3 cut(s) | 56, 71, 189 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 190 |
| BseGI | GGATG | 2 cut(s) | 62, 180 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BshFI | GGCC | 2 cut(s) | 18, 114 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BsnI | GGCC | 2 cut(s) | 18, 114 |
| Bsp1407I | TGTACA | 1 cut(s) | 126 |
| Bsp143I | GATC | 1 cut(s) | 90 |
| BspANI | GGCC | 2 cut(s) | 18, 114 |
| BspLI | GGNNCC | 1 cut(s) | 195 |
| BsrGI | TGTACA | 1 cut(s) | 126 |
| BssMI | GATC | 1 cut(s) | 90 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 53 |
| BstAUI | TGTACA | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 60 |
| BstF5I | GGATG | 2 cut(s) | 62, 180 |
| BstHHI | GCGC | 1 cut(s) | 58 |
| BstKTI | GATC | 1 cut(s) | 93 |
| BstMBI | GATC | 1 cut(s) | 90 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BsuRI | GGCC | 2 cut(s) | 18, 114 |
| BtsCI | GGATG | 2 cut(s) | 62, 180 |
| Cac8I | GCNNGC | 1 cut(s) | 60 |
| CaiI | CAGNNNCTG | 1 cut(s) | 50 |
| CfoI | GCGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 127 |
| CviJI | RGCY | 2 cut(s) | 18, 114 |
| CviKI_1 | RGCY | 2 cut(s) | 18, 114 |
| CviQI | GTAC | 1 cut(s) | 127 |
| DpnI | GATC | 1 cut(s) | 92 |
| DpnII | GATC | 1 cut(s) | 90 |
| EaeI | YGGCCR | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| Eco147I | AGGCCT | 1 cut(s) | 114 |
| Eco32I | GATATC | 1 cut(s) | 42 |
| EcoRV | GATATC | 1 cut(s) | 42 |
| FaiI | YATR | 2 cut(s) | 101, 146 |
| FokI | GGATG | 2 cut(s) | 49, 167 |
| GlaI | GCGC | 1 cut(s) | 57 |
| HaeIII | GGCC | 2 cut(s) | 18, 114 |
| HhaI | GCGC | 1 cut(s) | 58 |
| Hin6I | GCGC | 1 cut(s) | 56 |
| HinP1I | GCGC | 1 cut(s) | 56 |
| HinfI | GANTC | 1 cut(s) | 83 |
| Hpy166II | GTNNAC | 1 cut(s) | 158 |
| Hpy188I | TCNGA | 2 cut(s) | 32, 95 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| Hpy8I | GTNNAC | 1 cut(s) | 158 |
| HpyCH4V | TGCA | 2 cut(s) | 62, 180 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HspAI | GCGC | 1 cut(s) | 56 |
| Kzo9I | GATC | 1 cut(s) | 90 |
| LpnPI | CCDG | 3 cut(s) | 36, 65, 101 |
| LweI | GCATC | 3 cut(s) | 56, 71, 189 |
| MalI | GATC | 1 cut(s) | 92 |
| MboI | GATC | 1 cut(s) | 90 |
| MboII | GAAGA | 1 cut(s) | 218 |
| MlsI | TGGCCA | 1 cut(s) | 18 |
| MluCI | AATT | 4 cut(s) | 120, 130, 150, 188 |
| MluNI | TGGCCA | 1 cut(s) | 18 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 1 cut(s) | 104 |
| Mox20I | TGGCCA | 1 cut(s) | 18 |
| MroXI | GAANNNNTTC | 1 cut(s) | 154 |
| MscI | TGGCCA | 1 cut(s) | 18 |
| MseI | TTAA | 1 cut(s) | 117 |
| Msp20I | TGGCCA | 1 cut(s) | 18 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 90 |
| NlaIV | GGNNCC | 1 cut(s) | 195 |
| PceI | AGGCCT | 1 cut(s) | 114 |
| PdmI | GAANNNNTTC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 77 |
| PpsI | GAGTC | 1 cut(s) | 77 |
| PspN4I | GGNNCC | 1 cut(s) | 195 |
| PstNI | CAGNNNCTG | 1 cut(s) | 50 |
| RsaI | GTAC | 1 cut(s) | 128 |
| RsaNI | GTAC | 1 cut(s) | 127 |
| SaqAI | TTAA | 1 cut(s) | 117 |
| Sau3AI | GATC | 1 cut(s) | 90 |
| SchI | GAGTC | 1 cut(s) | 77 |
| SfaNI | GCATC | 3 cut(s) | 56, 71, 189 |
| Sse9I | AATT | 4 cut(s) | 120, 130, 150, 188 |
| SseBI | AGGCCT | 1 cut(s) | 114 |
| StuI | AGGCCT | 1 cut(s) | 114 |
| TasI | AATT | 4 cut(s) | 120, 130, 150, 188 |
| TatI | WGTACW | 1 cut(s) | 126 |
| Tru1I | TTAA | 1 cut(s) | 117 |
| Tru9I | TTAA | 1 cut(s) | 117 |
| XapI | RAATTY | 2 cut(s) | 120, 150 |
| XmnI | GAANNNNTTC | 1 cut(s) | 154 |