Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002237

Physical Location & Seq

Genomic Coordinates Reverse (-)

12509841 .. 12513795

Gene Structure 3955 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017066

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGGTACTGATGCTGCTGAAGTAGTAGGGACAGAGAGAAAGCCTAATTCCTTTAAGGTTCACCGTTCAATGTGCATTGAACTTTGGAAGTTGGTGGAGAGAATTTCAAAGATATTTCCCGACATAGAAGCAGCAAGACCTCGTTGCTCAACGGGAATACAGGCTCTATGCATGTTGAATCGTGCAATTGAGAAAGCCAAGCAACTTGTTCAGTATTGCAGCGAGTCTAGCAAACTCTACCTGGCGTTTACAGGGGATGTGATAGTCTCAAGATGTCAAAAATCAATAAACTTGTTGGAGCAAAGTTTGTGCCAGATTCAGAGTTGGGTTCCAGTGATTTTGGTGGCAGAGATCTCTAAAATAGTTGATGATCTTAAGGCTGCAACATTTAGACTGCATCCATCTGAAGAAGAGGCTGGGAAGGTCATCCGAGAATTGCTCCACCAAGATGCTTCTGCATCAAATTCAATAGAAGATTCTGAACTCAAGGCTCTTCAACTTGCATCCATGAGGCTCCATATTACCACATCAAAGGAAGTCTTAATCGAGAAAAGATCTATTAAGAAGTTGCTACAAAAAGTTGGTGACAGTGACCCTCGAAAAAAGCAGATCTTGACATATTTCTTGTATCTATTGAAGAAGTATGGAAACTTAATATTGGTAAAGCAAACAGAGAGTGCCCCTGTGGGGCAACAAGGATCACTTGCTTCTGAGAATTCTGGCAACGACTTTGGATATAATCAGTGTGCTGAAGTTGAACCTCACACTGGTTATGGGAAATATGAGGCACAAAGTAACATGTTGCTTGGAGCTGTACCTCCTCAAGAATTTTTGTGCGGGATATCTTCCAGGTTGATGTACGATCCTGTTGTCGTTGCTTCTGGACAAACATATGAAAGGATGTGGATACAGAAGTGGTTTGATGAGGGAAATGATACATGCCCAAAAACTAATACCAAACTGGCTCACCTTTCATTGACTCCAAACGTTGGCATGAAGGAGTTGATATCAAGGTGGTGTACGAAGTATGGAGTCACCATCCCCAACCCAAGTATGCAACCAGAAGCACTTAGCTCATGGGAAAACTCTTCCACTTCCATTGCTAGTTTAGGCAGTTCTATGAATGATCTACGTCTACAAATGGATCTCAGCACTATGTCATTTGGATCCTTAGATACCAGTTTCAATTCTAAGACAGAAGATGGCTCAAATCTGGTGCAGATTGATGATGATTCTCTGAAATACCGATCTGCTAAAAAATGCGAGACAGATTTGGAATTTCTATCTAATATTAGTGAGCTCAAATGGGATTCCCAACGCAAGGCTGTTGAAGATGTTAAAAACCATTTGAAACACAATCCTCAAGCATCTTCTGCTATGTCCTCTAAGAATTTTGTTGAACCTCTCATCAATTTTTTGAGGGATGCATATGATCAGGATGATGTAGAGGCTCAGAGAGATGGATTTAAATTATTATCTACCTTTGTCAGCAAAAACAGAAACGGGATATCTTATTTAGGTGAAGACGTGTATAGTCTGTTAGTATCTTCTCTTGATTCAGAGGTAAAGGAAGAAGGTCTTGCCATAATGGAAATTCTGTCTGTCCACCAGGACTGCAGAGGTAACATCTCATCATCTGGTGCACTTACATCCATTCTAAAACTTCTGGACTCTCAGAGCAGAAGTATACAAGGAAAAGCCCTTAAAATTTTGCACAATTTGTCCTTCGATAGAGATATTTGTTCAGAGATGGTATCTTTGGAGTGCATCCCAAAATTGGTTCCTTTCTTTGAAGACGGTGCTCTTACTGGAAACTGTATCGCTATATTGAAAAATCTGAGCGATTATGAAGGGGCCAGGATTTCTATTGCTGAAACTGATGGATGCATTGCTTATGTTGTTGAAGTCCTAGACACTGGCAGTGAAGAGCATCAAGAGCATGCTGTTGATATCCTTCTTTCTTTATGCTCTCAGCGCATTGACTATTGTAACTTGGTCATGCATGAGGGTGTTATTCCTGCTCTTGTCCTCTCATCTACCAATGGGACAGATAGAACAAGGATAAATGCAATGGAAGTTCTACGTCTCTTGAGAGATATTGATTATGTCGATGAGCAAGAATCTACTGAACCTGAGCCTGAGGCAGCTAGAGATGAGCTACCTAGAGACAATGGAAATCACTCGAACGGGAAGAAAGCTTCTAAAGCATCAGGATTTTTTGGAAAGAAGTTATCAATATTCTCAAAACCGAGTTCTCTTTCACCGAAAAAGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

760

Amino Acids

84.35

Weight (kDa)

5.54

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	274 - 341	3.1e-18	U-box domain
ARM_PUB	PF25598	437 - 698	2e-14	Plant U-box protein ARM repeat region
KAP	PF05804	499 - 646	4.4e-08	Kinesin-associated protein (KAP)
Arm_2	PF04826	505 - 610	8.8e-07	Armadillo-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36550
fragaria_vesca	FvH4_1g13090 FvH4_1g13090
malus_domestica	MD02G1145600.v1.1 MD15G1259700.v1.1
prunus_persica	Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1
pyrus_communis	pycom02g11520 pycom15g22690
rosa_chinensis	RchiOBHm_Chr2g0101271 RchiOBHm_Chr2g0104721 RchiOBHm_Chr2g0104731
rosa_laevigata	RLG00000017066 RLG00000017354
rosa_multiflora	Rmu_sc0006314.1_g000019
rosa_roxburghii	Rroxscaffold_2G00141450
rosa_rugosa	Rorug02G0099600 Rorug02G0122000 Rorug02G0122100 Rorug02G0122200
rosa_samantha	Rh2AG145600 Rh2AG172300 Rh2BG151000 Rh2BG179900 Rh2CG151400 Rh2CG177400 Rh2DG151100 Rh2DG178600
rosa_wichuraiana	Rw0G008640 Rw0G008650 Rw2G011360 Rw2G013490 Rw2G013550 Rw2G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	989
AccI	GTMKAC	2 cut(s)	1135, 1687
AciI	CCGC	1 cut(s)	837
AclI	AACGTT	1 cut(s)	987
AclWI	GGATC	5 cut(s)	706, 857, 1152, 1161, 1174
AcsI	RAATTY	8 cut(s)	102, 463, 715, 827, 1277, 1390, 1593, 1707
AcuI	CTGAAG	3 cut(s)	39, 426, 771
AfaI	GTAC	4 cut(s)	7, 816, 860, 1021
AfiI	CCNNNNNNNGG	5 cut(s)	687, 767, 989, 1321, 1777
AflII	CTTAAG	1 cut(s)	374
AflIII	ACRYGT	2 cut(s)	798, 1527
AjiI	CACGTC	1 cut(s)	1528
AjnI	CCWGG	4 cut(s)	240, 848, 1608, 1856
AluBI	AGCT	6 cut(s)	812, 1074, 1300, 2147, 2158, 2198
AluI	AGCT	6 cut(s)	812, 1074, 1300, 2147, 2158, 2198
Alw21I	GWGCWC	3 cut(s)	1302, 1645, 1804
Alw26I	GTCTC	4 cut(s)	271, 1259, 2090, 2160
Alw44I	GTGCAC	1 cut(s)	1641
AlwI	GGATC	5 cut(s)	706, 857, 1152, 1161, 1174
AoxI	GGCC	1 cut(s)	1854
ApaLI	GTGCAC	1 cut(s)	1641
ApeKI	GCWGC	5 cut(s)	14, 131, 219, 380, 2144
ApoI	RAATTY	8 cut(s)	102, 463, 715, 827, 1277, 1390, 1593, 1707
AspLEI	GCGC	1 cut(s)	1977
AspS9I	GGNCC	1 cut(s)	1854
AsuHPI	GGTGA	6 cut(s)	53, 596, 959, 1027, 1532, 2253
AxyI	CCTNAGG	1 cut(s)	2139
BaeGI	GKGCMC	2 cut(s)	682, 1645
BaeI	ACNNNNGTAYC	2 cut(s)	899, 932
BamHI	GGATCC	1 cut(s)	1166
BanII	GRGCYC	1 cut(s)	1302
BbsI	GAAGAC	2 cut(s)	1530, 1800
Bbv12I	GWGCWC	3 cut(s)	1302, 1645, 1804
BbvI	GCAGC	4 cut(s)	143, 231, 367, 2156
BccI	CCATC	6 cut(s)	409, 1046, 1196, 1454, 1744, 1874
BciT130I	CCWGG	4 cut(s)	242, 850, 1610, 1858
BciVI	GTATCC	1 cut(s)	900
BclI	TGATCA	1 cut(s)	1432
BcoDI	GTCTC	4 cut(s)	271, 1259, 2090, 2160
BfaI	CTAG	5 cut(s)	228, 1104, 1910, 2148, 2163
BfmI	CTRYAG	1 cut(s)	1615
BfrI	CTTAAG	1 cut(s)	374
BfuI	GTATCC	1 cut(s)	900
BglII	AGATCT	3 cut(s)	351, 554, 609
BisI	GCNGC	5 cut(s)	15, 132, 220, 381, 2145
BlsI	GCNGC	5 cut(s)	16, 133, 221, 382, 2146
Bme1390I	CCNGG	4 cut(s)	242, 850, 1610, 1858
BmgBI	CACGTC	1 cut(s)	1528
BmgT120I	GGNCC	1 cut(s)	1854
BmiI	GGNNCC	5 cut(s)	330, 515, 1168, 1782, 1855
BmrFI	CCNGG	4 cut(s)	242, 850, 1610, 1858
BpiI	GAAGAC	2 cut(s)	1530, 1800
BplI	GAGNNNNNCTC	2 cut(s)	423, 455
Bpu10I	CCTNAGC	1 cut(s)	2133
BpuEI	CTTGAG	5 cut(s)	253, 470, 807, 1347, 2110
Bsc4I	CCNNNNNNNGG	5 cut(s)	687, 767, 989, 1321, 1777
Bse1I	ACTGG	6 cut(s)	332, 772, 966, 1179, 1813, 1921
Bse21I	CCTNAGG	1 cut(s)	2139
Bse3DI	GCAATG	3 cut(s)	1098, 1887, 2076
BseBI	CCWGG	4 cut(s)	242, 850, 1610, 1858
BseLI	CCNNNNNNNGG	5 cut(s)	687, 767, 989, 1321, 1777
BseMI	GCAATG	3 cut(s)	1098, 1887, 2076
BseMII	CTCAG	8 cut(s)	702, 1162, 1466, 1688, 1829, 1985, 2124, 2130
BseNI	ACTGG	6 cut(s)	332, 772, 966, 1179, 1813, 1921
BseRI	GAGGAG	1 cut(s)	810
BseSI	GKGCMC	2 cut(s)	682, 1645
BseXI	GCAGC	4 cut(s)	143, 231, 367, 2156
BseYI	CCCAGC	1 cut(s)	416
BsgI	GTGCAG	1 cut(s)	1238
BshFI	GGCC	1 cut(s)	1856
BsiHKAI	GWGCWC	3 cut(s)	1302, 1645, 1804
BslFI	GGGAC	2 cut(s)	43, 2059
BslI	CCNNNNNNNGG	5 cut(s)	687, 767, 989, 1321, 1777
BsmAI	GTCTC	4 cut(s)	271, 1259, 2090, 2160
BsmBI	CGTCTC	1 cut(s)	2090
BsmFI	GGGAC	2 cut(s)	43, 2059
BsnI	GGCC	1 cut(s)	1856
Bsp1286I	GDGCHC	4 cut(s)	682, 1302, 1645, 1804
BspACI	CCGC	1 cut(s)	837
BspANI	GGCC	1 cut(s)	1856
BspCNI	CTCAG	8 cut(s)	703, 1161, 1465, 1687, 1830, 1984, 2125, 2131
BspLI	GGNNCC	5 cut(s)	330, 515, 1168, 1782, 1855
BspMAI	CTGCAG	1 cut(s)	1619
BspPI	GGATC	5 cut(s)	706, 857, 1152, 1161, 1174
BspQI	GCTCTTC	2 cut(s)	498, 1920
BspTI	CTTAAG	1 cut(s)	374
BsrDI	GCAATG	3 cut(s)	1098, 1887, 2076
BsrI	ACTGG	6 cut(s)	332, 772, 966, 1179, 1813, 1921
BssNAI	GTATAC	1 cut(s)	1688
Bst1107I	GTATAC	1 cut(s)	1688
Bst2UI	CCWGG	4 cut(s)	242, 850, 1610, 1858
Bst4CI	ACNGT	4 cut(s)	65, 590, 1799, 1817
Bst6I	CTCTTC	4 cut(s)	405, 498, 1093, 1920
BstAFI	CTTAAG	1 cut(s)	374
BstAPI	GCANNNNNTGC	1 cut(s)	1373
BstC8I	GCNNGC	1 cut(s)	1941
BstHHI	GCGC	1 cut(s)	1977
BstMAI	GTCTC	4 cut(s)	271, 1259, 2090, 2160
BstMWI	GCNNNNNNNGC	5 cut(s)	228, 1373, 1936, 1974, 2204
BstNI	CCWGG	4 cut(s)	242, 850, 1610, 1858
BstNSI	RCATGY	4 cut(s)	175, 802, 942, 1943
BstSCI	CCNGG	4 cut(s)	240, 848, 1608, 1856
BstSFI	CTRYAG	1 cut(s)	1615
BstSLI	GKGCMC	2 cut(s)	682, 1645
BstV1I	GCAGC	4 cut(s)	143, 231, 367, 2156
BstV2I	GAAGAC	2 cut(s)	1530, 1800
BstX2I	RGATCY	5 cut(s)	351, 554, 609, 1144, 1166
BstYI	RGATCY	5 cut(s)	351, 554, 609, 1144, 1166
BstZ17I	GTATAC	1 cut(s)	1688
Bsu36I	CCTNAGG	1 cut(s)	2139
BsuI	GTATCC	1 cut(s)	900
BsuRI	GGCC	1 cut(s)	1856
BtrI	CACGTC	1 cut(s)	1528
BtsI	GCAGTG	1 cut(s)	1927
BtsIMutI	CAGTG	6 cut(s)	339, 595, 749, 765, 1914, 1927
Cac8I	GCNNGC	1 cut(s)	1941
CfoI	GCGC	1 cut(s)	1977
Cfr13I	GGNCC	1 cut(s)	1854
Csp6I	GTAC	4 cut(s)	6, 815, 859, 1020
CspCI	CAANNNNNGTGG	2 cut(s)	1081, 1116
CviAII	CATG	9 cut(s)	172, 508, 799, 939, 994, 1077, 1940, 1999, 2003
CviQI	GTAC	4 cut(s)	6, 815, 859, 1020
DraI	TTTAAA	1 cut(s)	1468
Eam1104I	CTCTTC	4 cut(s)	405, 498, 1093, 1920
EarI	CTCTTC	4 cut(s)	405, 498, 1093, 1920
Ecl136II	GAGCTC	1 cut(s)	1300
Eco24I	GRGCYC	1 cut(s)	1302
Eco32I	GATATC	4 cut(s)	843, 1008, 1509, 1951
Eco53kI	GAGCTC	1 cut(s)	1300
Eco57I	CTGAAG	3 cut(s)	39, 426, 771
Eco81I	CCTNAGG	1 cut(s)	2139
EcoICRI	GAGCTC	1 cut(s)	1300
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	4 cut(s)	240, 848, 1608, 1856
EcoRV	GATATC	4 cut(s)	843, 1008, 1509, 1951
EcoT22I	ATGCAT	4 cut(s)	173, 1429, 1889, 2004
EcoT38I	GRGCYC	1 cut(s)	1302
Esp3I	CGTCTC	1 cut(s)	2090
FaeI	CATG	9 cut(s)	175, 511, 802, 942, 997, 1080, 1943, 2002, 2006
FalI	AAGNNNNNCTT	8 cut(s)	524, 556, 596, 628, 687, 719, 1563, 1595
FaqI	GGGAC	2 cut(s)	43, 2059
FatI	CATG	9 cut(s)	171, 507, 798, 938, 993, 1076, 1939, 1998, 2002
FauI	CCCGC	1 cut(s)	830
FauNDI	CATATG	2 cut(s)	892, 1429
FbaI	TGATCA	1 cut(s)	1432
FblI	GTMKAC	2 cut(s)	1135, 1687
Fnu4HI	GCNGC	5 cut(s)	15, 132, 220, 381, 2145
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	5 cut(s)	15, 132, 220, 381, 2145
FspBI	CTAG	5 cut(s)	228, 1104, 1910, 2148, 2163
GlaI	GCGC	1 cut(s)	1976
GluI	GCNGC	5 cut(s)	15, 132, 220, 381, 2145
GsaI	CCCAGC	1 cut(s)	420
HaeIII	GGCC	1 cut(s)	1856
HhaI	GCGC	1 cut(s)	1977
Hin1II	CATG	9 cut(s)	175, 511, 802, 942, 997, 1080, 1943, 2002, 2006
Hin6I	GCGC	1 cut(s)	1975
HinP1I	GCGC	1 cut(s)	1975
HindIII	AAGCTT	1 cut(s)	2196
HphI	GGTGA	6 cut(s)	53, 596, 959, 1027, 1532, 2253
Hpy166II	GTNNAC	7 cut(s)	61, 249, 1020, 1136, 1606, 1643, 1688
Hpy8I	GTNNAC	7 cut(s)	61, 249, 1020, 1136, 1606, 1643, 1688
HpyAV	CCTTC	6 cut(s)	415, 991, 1568, 1735, 1844, 1964
HpyCH4III	ACNGT	4 cut(s)	65, 590, 1799, 1817
HpyCH4IV	ACGT	4 cut(s)	987, 1132, 1527, 2083
HpyF10VI	GCNNNNNNNGC	5 cut(s)	228, 1373, 1936, 1974, 2204
HpySE526I	ACGT	4 cut(s)	987, 1132, 1527, 2083
Hsp92II	CATG	9 cut(s)	175, 511, 802, 942, 997, 1080, 1943, 2002, 2006
HspAI	GCGC	1 cut(s)	1975
Ksp22I	TGATCA	1 cut(s)	1432
LguI	GCTCTTC	2 cut(s)	498, 1920
LmnI	GCTCC	4 cut(s)	298, 444, 519, 809
Lsp1109I	GCAGC	4 cut(s)	143, 231, 367, 2156
MaeI	CTAG	5 cut(s)	228, 1104, 1910, 2148, 2163
MaeII	ACGT	4 cut(s)	987, 1132, 1527, 2083
MaeIII	GTNAC	6 cut(s)	584, 590, 794, 1033, 1622, 1988
MfeI	CAATTG	1 cut(s)	186
MflI	RGATCY	5 cut(s)	351, 554, 609, 1144, 1166
MhlI	GDGCHC	4 cut(s)	682, 1302, 1645, 1804
MlyI	GAGTC	4 cut(s)	233, 973, 1041, 1664
MmeI	TCCRAC	1 cut(s)	276
Mph1103I	ATGCAT	4 cut(s)	173, 1429, 1889, 2004
MseI	TTAA	8 cut(s)	54, 375, 542, 561, 653, 1338, 1467, 1704
MslI	CAYNNNNRTG	2 cut(s)	447, 2007
MspCI	CTTAAG	1 cut(s)	374
MspR9I	CCNGG	4 cut(s)	242, 850, 1610, 1858
MunI	CAATTG	1 cut(s)	186
MvaI	CCWGG	4 cut(s)	242, 850, 1610, 1858
MwoI	GCNNNNNNNGC	5 cut(s)	228, 1373, 1936, 1974, 2204
NdeI	CATATG	2 cut(s)	892, 1429
NlaIII	CATG	9 cut(s)	175, 511, 802, 942, 997, 1080, 1943, 2002, 2006
NlaIV	GGNNCC	5 cut(s)	330, 515, 1168, 1782, 1855
NmuCI	GTSAC	3 cut(s)	584, 590, 1033
NsiI	ATGCAT	4 cut(s)	173, 1429, 1889, 2004
NspI	RCATGY	4 cut(s)	175, 802, 942, 1943
PaeI	GCATGC	1 cut(s)	1943
PciI	ACATGT	1 cut(s)	798
PciSI	GCTCTTC	2 cut(s)	498, 1920
PfeI	GAWTC	7 cut(s)	178, 316, 476, 1232, 1310, 1556, 2120
PflMI	CCANNNNNTGG	1 cut(s)	989
PkrI	GCNGC	5 cut(s)	16, 133, 221, 382, 2146
PleI	GAGTC	4 cut(s)	232, 973, 1040, 1664
PpsI	GAGTC	4 cut(s)	232, 973, 1040, 1664
PscI	ACATGT	1 cut(s)	798
Psp124BI	GAGCTC	1 cut(s)	1302
Psp1406I	AACGTT	1 cut(s)	987
Psp6I	CCWGG	4 cut(s)	240, 848, 1608, 1856
PspFI	CCCAGC	1 cut(s)	416
PspGI	CCWGG	4 cut(s)	240, 848, 1608, 1856
PspN4I	GGNNCC	5 cut(s)	330, 515, 1168, 1782, 1855
PspPI	GGNCC	1 cut(s)	1854
PstI	CTGCAG	1 cut(s)	1619
PsuI	RGATCY	5 cut(s)	351, 554, 609, 1144, 1166
RsaI	GTAC	4 cut(s)	7, 816, 860, 1021
RsaNI	GTAC	4 cut(s)	6, 815, 859, 1020
RseI	CAYNNNNRTG	2 cut(s)	447, 2007
SacI	GAGCTC	1 cut(s)	1302
SapI	GCTCTTC	2 cut(s)	498, 1920
SaqAI	TTAA	8 cut(s)	54, 375, 542, 561, 653, 1338, 1467, 1704
SatI	GCNGC	5 cut(s)	15, 132, 220, 381, 2145
Sau96I	GGNCC	1 cut(s)	1854
SchI	GAGTC	4 cut(s)	233, 973, 1041, 1664
ScrFI	CCNGG	4 cut(s)	242, 850, 1610, 1858
SduI	GDGCHC	4 cut(s)	682, 1302, 1645, 1804
SfcI	CTRYAG	1 cut(s)	1615
SmiI	ATTTAAAT	1 cut(s)	1468
SmiMI	CAYNNNNRTG	2 cut(s)	447, 2007
SmlI	CTYRAG	6 cut(s)	268, 374, 485, 822, 1362, 2089
SmoI	CTYRAG	6 cut(s)	268, 374, 485, 822, 1362, 2089
SphI	GCATGC	1 cut(s)	1943
SsiI	CCGC	1 cut(s)	837
SspI	AATATT	3 cut(s)	657, 1291, 2238
SspMI	CTAG	5 cut(s)	228, 1104, 1910, 2148, 2163
SstI	GAGCTC	1 cut(s)	1302
StyD4I	CCNGG	4 cut(s)	240, 848, 1608, 1856
SwaI	ATTTAAAT	1 cut(s)	1468
TaaI	ACNGT	4 cut(s)	65, 590, 1799, 1817
TaiI	ACGT	4 cut(s)	990, 1135, 1530, 2086
TaqI	TCGA	5 cut(s)	546, 598, 1728, 2109, 2183
TfiI	GAWTC	7 cut(s)	178, 316, 476, 1232, 1310, 1556, 2120
Tru1I	TTAA	8 cut(s)	54, 375, 542, 561, 653, 1338, 1467, 1704
Tru9I	TTAA	8 cut(s)	54, 375, 542, 561, 653, 1338, 1467, 1704
TscAI	CASTG	6 cut(s)	339, 595, 749, 772, 1921, 1927
TseFI	GTSAC	3 cut(s)	584, 590, 1033
TseI	GCWGC	5 cut(s)	14, 131, 219, 380, 2144
Tsp45I	GTSAC	3 cut(s)	584, 590, 1033
TspDTI	ATGAA	5 cut(s)	909, 963, 1010, 1136, 1863
TspRI	CASTG	6 cut(s)	339, 595, 749, 772, 1921, 1927
Van91I	CCANNNNNTGG	1 cut(s)	989
Vha464I	CTTAAG	1 cut(s)	374
VneI	GTGCAC	1 cut(s)	1641
XapI	RAATTY	8 cut(s)	102, 463, 715, 827, 1277, 1390, 1593, 1707
XceI	RCATGY	4 cut(s)	175, 802, 942, 1943
XmiI	GTMKAC	2 cut(s)	1135, 1687
XspI	CTAG	5 cut(s)	228, 1104, 1910, 2148, 2163
Zsp2I	ATGCAT	4 cut(s)	173, 1429, 1889, 2004

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.