Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002237

Physical Location & Seq

Genomic Coordinates Reverse (-)

10528163 .. 10530440

Gene Structure 2278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0122200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGATGCAAGATATGTGGAATGCTCCACCGGGTTTCAGACCCACCAAATCTGCTCCTTCCTCTCCGGCCAAGCCTCTCGGAGTTTCGAGGACTCGGTCCGAGTCGTTCCATGTGACTCACAAGGTCCCAGTGGGGGACACTCCTTACGTCAGAGCCAAGAATGTTCAGCTGGTGGATAAGGATCCAGAGAGGGCTATTCCTCTGTTCTGGGCGGCCATTAATTCTGGGGATAGAGTTGACAGTGCTCTCAAGGACATGGCTATTGTGATGAAGCAACAGAATAGGGCTGAGGAAGCCATTGAAGCCATCAAGTCATTGAGACATCGGTGTTCGGATCAAGCCCAGGAGTCACTTGACAACATTCTATTGGATCTTTACAAGAGATGTGGAAGATTGGATGATCAAATAGCACTTTTGAGGCACAAGTTGTTCTTGATTCAACAAGGAATGGCTTTCAATGGAAAACGCACCAAAACTGCCAGATCTCAAGGGAAGAAATTTCAAGTCTCTGTGGAACAAGAAGCCACTAGATTACTGGGGAATTTGGGGTGGGCTTTGATGCAGCAGAACAACTACATTGAAGCCGAAGATGCATACCGGCGAGCACTAACTATAGCACCAGACAACAACAAAATGTGCAATCTCGGAATCTGCTTAATGAAGCAAGGAAGAATCTCGGAAGCTAAAGAAAATCTCCGGCGAGTCAAGCCTGCGGTGGCTGATGGGCCAAGAGGAACAGATTCACATCTCAAAGCCTATGAAAGGGCGCAGCAAATGCTCAAGGACTTGGAGTCTGAGATGATGAACAAGGGTCTGGACCGGGTAGAGCAGAGCCGGCTTTTCGATGCCTTTCTTGGGTCCTCATCGATTTGGCAGCCCCAGCCTTGCAGAGACAATCACCACACCACATTGCCTCCAGTGGAATCTGTCAAAATCGATGAGTTTGCGGACGAAAACATCAACTCCTTGCTGCTAACTCAGCCCAGAACCAAAGTTCTGCCTCCTCTTGGAAACAACAACGCACTTAACTCACTGAATTGTGCTGCACAGCCTTTTTACTCGAAGCTCATTCCTGGTCCAATAGGGAATGGTTCTCAATCTCAATGTGCTGAGACCCTTAAGAGGACTAGGTCTGGGAATGCTGCCAATATGAGAGTGAGTGATGCAATTGAGATCCCAACAAAGCCTACTGTGGAGTTGGGTGTACCGGAAAACAAGACCCGAAGAAGGCTGTCACTTGAGGAAAATGAAGAGAACAACAAGTTGGCTCAGTTTTTGCCTGATAGCAAGGACTTTGAAGAGGCCATCATTGCTGCTGTGATTGACCCAACAAATGAAGCAGCGAAGGCGATTGGCAATGGAAACAATTCGGGGATGTTTCCAAAGAAGATTGAGAAGAGGCTCAGGGTATTTCAAGACATTACTCTCTCTTTAAGTCCAAGGGCAAGGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

484

Amino Acids

54.03

Weight (kDa)

9.22

Isoelectric Point (pI)

51.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_2	PF07719	178 - 209	2e-07	Tetratricopeptide repeat
TPR_1	PF00515	178 - 209	3.6e-08	Tetratricopeptide repeat
TPR_19	PF14559	186 - 244	1.3e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36550
fragaria_vesca	FvH4_1g13090 FvH4_1g13090
malus_domestica	MD02G1145600.v1.1 MD15G1259700.v1.1
prunus_persica	Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1
pyrus_communis	pycom02g11520 pycom15g22690
rosa_chinensis	RchiOBHm_Chr2g0101271 RchiOBHm_Chr2g0104721 RchiOBHm_Chr2g0104731
rosa_laevigata	RLG00000017066 RLG00000017354
rosa_multiflora	Rmu_sc0006314.1_g000019
rosa_roxburghii	Rroxscaffold_2G00141450
rosa_rugosa	Rorug02G0099600 Rorug02G0122000 Rorug02G0122100 Rorug02G0122200
rosa_samantha	Rh2AG145600 Rh2AG172300 Rh2BG151000 Rh2BG179900 Rh2CG151400 Rh2CG177400 Rh2DG151100 Rh2DG178600
rosa_wichuraiana	Rw0G008640 Rw0G008650 Rw2G011360 Rw2G013490 Rw2G013550 Rw2G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	212, 713, 947
AclWI	GGATC	5 cut(s)	176, 189, 342, 378, 1168
AcoI	YGGCCR	2 cut(s)	66, 213
AcsI	RAATTY	2 cut(s)	497, 541
AfaI	GTAC	1 cut(s)	1206
AfiI	CCNNNNNNNGG	6 cut(s)	133, 762, 855, 1007, 1122, 1227
AflII	CTTAAG	1 cut(s)	1118
AgsI	TTSAA	7 cut(s)	302, 440, 457, 503, 581, 1298, 1415
AhdI	GACNNNNNGTC	1 cut(s)	790
AjnI	CCWGG	2 cut(s)	342, 1072
AjuI	GAANNNNNNNTTGG	2 cut(s)	1247, 1279
AluBI	AGCT	3 cut(s)	169, 683, 1066
AluI	AGCT	3 cut(s)	169, 683, 1066
Alw21I	GWGCWC	2 cut(s)	247, 607
Alw26I	GTCTC	4 cut(s)	313, 511, 885, 1106
AlwI	GGATC	5 cut(s)	176, 189, 342, 378, 1168
AoxI	GGCC	5 cut(s)	66, 213, 725, 1302, 1449
ApeKI	GCWGC	8 cut(s)	562, 769, 874, 970, 1043, 1142, 1313, 1340
ApoI	RAATTY	2 cut(s)	497, 541
AseI	ATTAAT	1 cut(s)	219
Asp700I	GAANNNNTTC	2 cut(s)	739, 1366
AspLEI	GCGC	1 cut(s)	769
AspS9I	GGNCC	7 cut(s)	96, 124, 725, 817, 858, 1076, 1449
AsuC2I	CCSGG	2 cut(s)	30, 821
AsuHPI	GGTGA	1 cut(s)	890
AvaII	GGWCC	5 cut(s)	96, 124, 817, 858, 1076
BamHI	GGATCC	1 cut(s)	181
Bbv12I	GWGCWC	2 cut(s)	247, 607
BbvCI	CCTCAGC	1 cut(s)	288
BbvI	GCAGC	8 cut(s)	574, 781, 886, 957, 1030, 1129, 1300, 1352
BccI	CCATC	3 cut(s)	314, 716, 1313
BcgI	CGANNNNNNTGC	2 cut(s)	926, 960
BciT130I	CCWGG	2 cut(s)	344, 1074
BclI	TGATCA	1 cut(s)	400
BcnI	CCSGG	2 cut(s)	30, 821
BcoDI	GTCTC	4 cut(s)	313, 511, 885, 1106
BfaI	CTAG	2 cut(s)	528, 1128
BfmI	CTRYAG	1 cut(s)	612
BfrI	CTTAAG	1 cut(s)	1118
BglII	AGATCT	1 cut(s)	482
BisI	GCNGC	9 cut(s)	213, 563, 770, 875, 971, 1044, 1143, 1314, 1341
BlsI	GCNGC	9 cut(s)	214, 564, 771, 876, 972, 1045, 1144, 1315, 1342
Bme1390I	CCNGG	4 cut(s)	30, 344, 821, 1074
Bme18I	GGWCC	5 cut(s)	96, 124, 817, 858, 1076
BmeRI	GACNNNNNGTC	1 cut(s)	790
BmgT120I	GGNCC	7 cut(s)	96, 124, 725, 817, 858, 1076, 1449
BmiI	GGNNCC	3 cut(s)	126, 183, 859
BmrFI	CCNGG	4 cut(s)	30, 344, 821, 1074
BmrI	ACTGGG	2 cut(s)	122, 545
BmsI	GCATC	4 cut(s)	549, 580, 835, 1153
BmuI	ACTGGG	2 cut(s)	122, 545
BpmI	CTGGAG	1 cut(s)	900
Bpu10I	CCTNAGC	2 cut(s)	288, 1403
BpuEI	CTTGAG	4 cut(s)	233, 471, 764, 1259
BpuMI	CCSGG	2 cut(s)	30, 821
Bsa29I	ATCGAT	2 cut(s)	866, 936
BsaBI	GATNNNNATC	2 cut(s)	180, 744
BsaI	GGTCTC	1 cut(s)	1106
BsaJI	CCNNGG	2 cut(s)	342, 1439
BsaWI	WCCGGW	1 cut(s)	1207
BsaXI	ACNNNNNCTCC	4 cut(s)	898, 928, 947, 977
Bsc4I	CCNNNNNNNGG	6 cut(s)	133, 762, 855, 1007, 1122, 1227
Bse118I	RCCGGY	2 cut(s)	597, 834
Bse1I	ACTGG	3 cut(s)	128, 540, 917
Bse3DI	GCAATG	3 cut(s)	908, 1308, 1363
Bse8I	GATNNNNATC	2 cut(s)	180, 744
BseBI	CCWGG	2 cut(s)	344, 1074
BseCI	ATCGAT	2 cut(s)	866, 936
BseDI	CCNNGG	2 cut(s)	342, 1439
BseGI	GGATG	2 cut(s)	403, 1380
BseJI	GATNNNNATC	2 cut(s)	180, 744
BseLI	CCNNNNNNNGG	6 cut(s)	133, 762, 855, 1007, 1122, 1227
BseMI	GCAATG	3 cut(s)	908, 1308, 1363
BseMII	CTCAG	6 cut(s)	279, 786, 992, 1101, 1283, 1417
BseNI	ACTGG	3 cut(s)	128, 540, 917
BseRI	GAGGAG	1 cut(s)	993
BseXI	GCAGC	8 cut(s)	574, 781, 886, 957, 1030, 1129, 1300, 1352
BseYI	CCCAGC	1 cut(s)	879
BsgI	GTGCAG	1 cut(s)	1029
BshFI	GGCC	5 cut(s)	68, 215, 727, 1304, 1451
BshVI	ATCGAT	2 cut(s)	866, 936
BsiHKAI	GWGCWC	2 cut(s)	247, 607
BsiSI	CCGG	7 cut(s)	29, 65, 598, 697, 820, 835, 1208
BslFI	GGGAC	2 cut(s)	110, 149
BslI	CCNNNNNNNGG	6 cut(s)	133, 762, 855, 1007, 1122, 1227
BsmAI	GTCTC	4 cut(s)	313, 511, 885, 1106
BsmFI	GGGAC	2 cut(s)	110, 149
BsmI	GAATGC	2 cut(s)	25, 1144
BsnI	GGCC	5 cut(s)	68, 215, 727, 1304, 1451
Bso31I	GGTCTC	1 cut(s)	1106
Bsp1286I	GDGCHC	2 cut(s)	247, 607
Bsp143I	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
BspACI	CCGC	3 cut(s)	212, 713, 947
BspANI	GGCC	5 cut(s)	68, 215, 727, 1304, 1451
BspCNI	CTCAG	6 cut(s)	280, 787, 991, 1102, 1282, 1416
BspDI	ATCGAT	2 cut(s)	866, 936
BspLI	GGNNCC	3 cut(s)	126, 183, 859
BspPI	GGATC	5 cut(s)	176, 189, 342, 378, 1168
BspTI	CTTAAG	1 cut(s)	1118
BspTNI	GGTCTC	1 cut(s)	1106
BsrDI	GCAATG	3 cut(s)	908, 1308, 1363
BsrFI	RCCGGY	2 cut(s)	597, 834
BsrI	ACTGG	3 cut(s)	128, 540, 917
BssAI	RCCGGY	2 cut(s)	597, 834
BssECI	CCNNGG	2 cut(s)	342, 1439
BssMI	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
BssT1I	CCWWGG	1 cut(s)	1439
Bst2UI	CCWGG	2 cut(s)	344, 1074
Bst4CI	ACNGT	2 cut(s)	242, 1192
Bst6I	CTCTTC	3 cut(s)	1245, 1293, 1391
BstAFI	CTTAAG	1 cut(s)	1118
BstAPI	GCANNNNNTGC	1 cut(s)	775
BstC8I	GCNNGC	3 cut(s)	603, 711, 836
BstDEI	CTNAG	6 cut(s)	288, 795, 978, 1110, 1269, 1403
BstENI	CCTNNNNNAGG	1 cut(s)	760
BstF5I	GGATG	2 cut(s)	403, 1380
BstHHI	GCGC	1 cut(s)	769
BstKTI	GATC	6 cut(s)	184, 337, 373, 403, 485, 1176
BstMAI	GTCTC	4 cut(s)	313, 511, 885, 1106
BstMBI	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
BstNI	CCWGG	2 cut(s)	344, 1074
BstSCI	CCNGG	4 cut(s)	28, 342, 819, 1072
BstSFI	CTRYAG	1 cut(s)	612
BstV1I	GCAGC	8 cut(s)	574, 781, 886, 957, 1030, 1129, 1300, 1352
BstX2I	RGATCY	4 cut(s)	181, 370, 482, 1173
BstYI	RGATCY	4 cut(s)	181, 370, 482, 1173
Bsu15I	ATCGAT	2 cut(s)	866, 936
BsuRI	GGCC	5 cut(s)	68, 215, 727, 1304, 1451
BsuTUI	ATCGAT	2 cut(s)	866, 936
BtsCI	GGATG	2 cut(s)	403, 1380
BtsIMutI	CAGTG	4 cut(s)	135, 247, 924, 1031
Cac8I	GCNNGC	3 cut(s)	603, 711, 836
CfoI	GCGC	1 cut(s)	769
Cfr10I	RCCGGY	2 cut(s)	597, 834
Cfr13I	GGNCC	7 cut(s)	96, 124, 725, 817, 858, 1076, 1449
ClaI	ATCGAT	2 cut(s)	866, 936
CpoI	CGGWCCG	1 cut(s)	96
Csp6I	GTAC	1 cut(s)	1205
CspCI	CAANNNNNGTGG	3 cut(s)	31, 367, 402
CspI	CGGWCCG	1 cut(s)	96
CviAII	CATG	2 cut(s)	110, 256
CviQI	GTAC	1 cut(s)	1205
DdeI	CTNAG	6 cut(s)	288, 795, 978, 1110, 1269, 1403
DpnI	GATC	6 cut(s)	183, 336, 372, 402, 484, 1175
DpnII	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
DriI	GACNNNNNGTC	1 cut(s)	790
EaeI	YGGCCR	2 cut(s)	66, 213
Eam1104I	CTCTTC	3 cut(s)	1245, 1293, 1391
Eam1105I	GACNNNNNGTC	1 cut(s)	790
EarI	CTCTTC	3 cut(s)	1245, 1293, 1391
Eco130I	CCWWGG	1 cut(s)	1439
Eco31I	GGTCTC	1 cut(s)	1106
Eco47I	GGWCC	5 cut(s)	96, 124, 817, 858, 1076
EcoNI	CCTNNNNNAGG	1 cut(s)	760
EcoO109I	RGGNCCY	3 cut(s)	124, 858, 1449
EcoRII	CCWGG	2 cut(s)	342, 1072
EcoT14I	CCWWGG	1 cut(s)	1439
EcoT22I	ATGCAT	1 cut(s)	595
ErhI	CCWWGG	1 cut(s)	1439
FaeI	CATG	2 cut(s)	113, 259
FaiI	YATR	7 cut(s)	14, 111, 257, 595, 614, 759, 1151
FalI	AAGNNNNNCTT	2 cut(s)	416, 448
FaqI	GGGAC	2 cut(s)	110, 149
FatI	CATG	2 cut(s)	109, 255
FbaI	TGATCA	1 cut(s)	400
Fnu4HI	GCNGC	9 cut(s)	213, 563, 770, 875, 971, 1044, 1143, 1314, 1341
FokI	GGATG	2 cut(s)	410, 1387
Fsp4HI	GCNGC	9 cut(s)	213, 563, 770, 875, 971, 1044, 1143, 1314, 1341
FspBI	CTAG	2 cut(s)	528, 1128
GlaI	GCGC	1 cut(s)	768
GluI	GCNGC	9 cut(s)	213, 563, 770, 875, 971, 1044, 1143, 1314, 1341
GsaI	CCCAGC	1 cut(s)	883
GsuI	CTGGAG	1 cut(s)	900
HaeIII	GGCC	5 cut(s)	68, 215, 727, 1304, 1451
HapII	CCGG	7 cut(s)	29, 65, 598, 697, 820, 835, 1208
HhaI	GCGC	1 cut(s)	769
Hin1II	CATG	2 cut(s)	113, 259
Hin6I	GCGC	1 cut(s)	767
HinP1I	GCGC	1 cut(s)	767
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HpaII	CCGG	7 cut(s)	29, 65, 598, 697, 820, 835, 1208
HphI	GGTGA	1 cut(s)	890
Hpy166II	GTNNAC	2 cut(s)	238, 1205
Hpy188I	TCNGA	8 cut(s)	38, 80, 100, 152, 334, 647, 679, 796
Hpy188III	TCNNGA	4 cut(s)	185, 433, 815, 1415
Hpy8I	GTNNAC	2 cut(s)	238, 1205
HpyAV	CCTTC	3 cut(s)	66, 1221, 1339
HpyCH4III	ACNGT	2 cut(s)	242, 1192
HpyCH4IV	ACGT	1 cut(s)	147
HpyCH4V	TGCA	7 cut(s)	7, 562, 593, 639, 888, 1046, 1166
HpyF3I	CTNAG	6 cut(s)	288, 795, 978, 1110, 1269, 1403
HpySE526I	ACGT	1 cut(s)	147
Hsp92II	CATG	2 cut(s)	113, 259
HspAI	GCGC	1 cut(s)	767
KroI	GCCGGC	1 cut(s)	834
KroNI	GCCGGC	1 cut(s)	836
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
LmnI	GCTCC	2 cut(s)	28, 58
Lsp1109I	GCAGC	8 cut(s)	574, 781, 886, 957, 1030, 1129, 1300, 1352
LweI	GCATC	4 cut(s)	549, 580, 835, 1153
MaeI	CTAG	2 cut(s)	528, 1128
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	3 cut(s)	112, 348, 1233
MalI	GATC	6 cut(s)	183, 336, 372, 402, 484, 1175
MboI	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
MboII	GAAGA	9 cut(s)	402, 505, 599, 681, 1236, 1262, 1310, 1399, 1408
MfeI	CAATTG	1 cut(s)	1167
MflI	RGATCY	4 cut(s)	181, 370, 482, 1173
MhlI	GDGCHC	2 cut(s)	247, 607
MluCI	AATT	6 cut(s)	220, 497, 541, 1036, 1167, 1366
MlyI	GAGTC	6 cut(s)	85, 109, 110, 356, 711, 800
Mph1103I	ATGCAT	1 cut(s)	595
MroNI	GCCGGC	1 cut(s)	834
MroXI	GAANNNNTTC	2 cut(s)	739, 1366
MseI	TTAA	5 cut(s)	219, 656, 1026, 1119, 1433
MspA1I	CMGCKG	1 cut(s)	169
MspCI	CTTAAG	1 cut(s)	1118
MspI	CCGG	7 cut(s)	29, 65, 598, 697, 820, 835, 1208
MspR9I	CCNGG	4 cut(s)	30, 344, 821, 1074
MunI	CAATTG	1 cut(s)	1167
Mva1269I	GAATGC	2 cut(s)	25, 1144
MvaI	CCWGG	2 cut(s)	344, 1074
NaeI	GCCGGC	1 cut(s)	836
NciI	CCSGG	2 cut(s)	30, 821
NdeII	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
NgoMIV	GCCGGC	1 cut(s)	834
NlaIII	CATG	2 cut(s)	113, 259
NlaIV	GGNNCC	3 cut(s)	126, 183, 859
NmuCI	GTSAC	3 cut(s)	112, 348, 1233
NsiI	ATGCAT	1 cut(s)	595
PctI	GAATGC	2 cut(s)	25, 1144
PdiI	GCCGGC	1 cut(s)	836
PdmI	GAANNNNTTC	2 cut(s)	739, 1366
PfeI	GAWTC	5 cut(s)	436, 648, 672, 740, 923
PflFI	GACNNNGTC	2 cut(s)	94, 1129
PkrI	GCNGC	9 cut(s)	214, 564, 771, 876, 972, 1045, 1144, 1315, 1342
PleI	GAGTC	6 cut(s)	85, 109, 109, 355, 710, 799
PpsI	GAGTC	6 cut(s)	85, 109, 109, 355, 710, 799
PpuMI	RGGWCCY	2 cut(s)	124, 858
PshBI	ATTAAT	1 cut(s)	219
Psp5II	RGGWCCY	2 cut(s)	124, 858
Psp6I	CCWGG	2 cut(s)	342, 1072
PspFI	CCCAGC	1 cut(s)	879
PspGI	CCWGG	2 cut(s)	342, 1072
PspN4I	GGNNCC	3 cut(s)	126, 183, 859
PspPI	GGNCC	7 cut(s)	96, 124, 725, 817, 858, 1076, 1449
PspPPI	RGGWCCY	2 cut(s)	124, 858
PsuI	RGATCY	4 cut(s)	181, 370, 482, 1173
PsyI	GACNNNGTC	2 cut(s)	94, 1129
PvuII	CAGCTG	1 cut(s)	169
RsaI	GTAC	1 cut(s)	1206
RsaNI	GTAC	1 cut(s)	1205
Rsr2I	CGGWCCG	1 cut(s)	96
RsrII	CGGWCCG	1 cut(s)	96
SaqAI	TTAA	5 cut(s)	219, 656, 1026, 1119, 1433
SatI	GCNGC	9 cut(s)	213, 563, 770, 875, 971, 1044, 1143, 1314, 1341
Sau3AI	GATC	6 cut(s)	181, 334, 370, 400, 482, 1173
Sau96I	GGNCC	7 cut(s)	96, 124, 725, 817, 858, 1076, 1449
SchI	GAGTC	6 cut(s)	85, 109, 110, 356, 711, 800
ScrFI	CCNGG	4 cut(s)	30, 344, 821, 1074
SduI	GDGCHC	2 cut(s)	247, 607
SetI	ASST	6 cut(s)	126, 150, 171, 685, 1068, 1133
SfaNI	GCATC	4 cut(s)	549, 580, 835, 1153
SfcI	CTRYAG	1 cut(s)	612
SinI	GGWCC	5 cut(s)	96, 124, 817, 858, 1076
SmlI	CTYRAG	5 cut(s)	248, 486, 779, 1118, 1238
SmoI	CTYRAG	5 cut(s)	248, 486, 779, 1118, 1238
Sse9I	AATT	6 cut(s)	220, 497, 541, 1036, 1167, 1366
SsiI	CCGC	3 cut(s)	212, 713, 947
SspMI	CTAG	2 cut(s)	528, 1128
StyD4I	CCNGG	4 cut(s)	28, 342, 819, 1072
StyI	CCWWGG	1 cut(s)	1439
TaaI	ACNGT	2 cut(s)	242, 1192
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	5 cut(s)	86, 843, 866, 936, 1061
TaqII	GACCGA	1 cut(s)	84
TasI	AATT	6 cut(s)	220, 497, 541, 1036, 1167, 1366
TauI	GCSGC	1 cut(s)	215
TfiI	GAWTC	5 cut(s)	436, 648, 672, 740, 923
Tru1I	TTAA	5 cut(s)	219, 656, 1026, 1119, 1433
Tru9I	TTAA	5 cut(s)	219, 656, 1026, 1119, 1433
TscAI	CASTG	4 cut(s)	135, 247, 924, 1038
TseFI	GTSAC	3 cut(s)	112, 348, 1233
TseI	GCWGC	8 cut(s)	562, 769, 874, 970, 1043, 1142, 1313, 1340
Tsp45I	GTSAC	3 cut(s)	112, 348, 1233
TspDTI	ATGAA	6 cut(s)	284, 674, 774, 818, 1263, 1350
TspRI	CASTG	4 cut(s)	135, 247, 924, 1038
Tth111I	GACNNNGTC	2 cut(s)	94, 1129
Vha464I	CTTAAG	1 cut(s)	1118
VpaK11BI	GGWCC	5 cut(s)	96, 124, 817, 858, 1076
VspI	ATTAAT	1 cut(s)	219
XagI	CCTNNNNNAGG	1 cut(s)	760
XapI	RAATTY	2 cut(s)	497, 541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	532
XmnI	GAANNNNTTC	2 cut(s)	739, 1366
XspI	CTAG	2 cut(s)	528, 1128
Zsp2I	ATGCAT	1 cut(s)	595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.