Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0002237

Physical Location & Seq

Genomic Coordinates Reverse (-)

8114652 .. 8118632

Gene Structure 3981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g11520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGGTAACGGTGCTGCTGAAGTGGTGGAGGCAGCGAGAAAACATCATTCCTTTAAGGTTCATCGTTTAATGTGCTCGGAACTTCTGAGGTTGGTAGATAAAATCTCCAGGATATTTCCAGAGATAGAAGCAGCTCGACCTCGCTGCTCAACAGGAATACAGGCTCTATGCTTGTTAAATAGTGGAATTGAGAAAGCCAAGCTACTTCTTCAGCATTGCAGCGAGTCTAGTAAACTCTACCTGGCAGTTACTGGGGATGTGATAGTTTTAAGATGTCAAAAATCAAGGAAATTGTTGGAGCAAAGCTTACGGGAAATTCAGAACTGGGTTCCAATGATGTTGGTGATGCAGATCTCTCAAGTAGCTGATGATCTTAAAGGTGCAACATTTATAGTGGACCCATCTGAAGAAGAAGCAGGGAGGGTTGTTCGAGAATTGCTTCATAATGATTCTTCTCGATCAAACCAAAGGGAGGATTATGAAATCAAGGCTCTTCAAATTGCATCCCTTAGGCTCCATATTACATCATCGAAGGCAATCTTAATGGAGAAAAGATCTATTAAGAAGCTACTAGATAAAGTTGGTGACAATGAAACTCGAAAAAAACAGATTTTGACTTATTTCATGTATCTATTGAATAAGCATGGAAAGTTGATAACGGGAAAGCAAACAGAGAGTGCCTCAGAGCAGCAACAAGGATCATTTGTTCCTGAGAATTCTGGAAATGGTTTTGAATCTAATCAACACACTGAAATTGAATCTCCCATTGGTTATGGCGAGTCCAAGGCACAAAGAAACTTGTTTCGTGGAGCTGTACCTCCTGAAGCATTTATGTGTAGAATATCTTCCGGAATGATGTACGATCCTGTTGTCATTGATTCTGGACAAACATATGAAAGGATGTGGATACAGAAGTGGTTTGATGAGGGTCACGATACATGCCCAAATACTAATGTGAAACTAAACAACCTGTCATTGACTCCGAACATTGCCATGAAGGAGTTAATATCAAGGTGGTGTACACAGAATGGAGTTGCCCTTCCGGACCCAAGTGTGCAACCAGAAGCCCTCTCATGGGAAACATCGTCCACTTCCATAGCTAGTTTAGGCAGCTCTATGAATGATCTTCACCTACAGATGGACTTCAGCAATATATCATTTGGGTCCTTAGATACCAGTTACAATTCGGACTCATCGCGCAATAAGATTGAAAATGGCTCGAGTTTGGTGCAGAACGACAATGATTCTCTGAACTACCAGAATGCTAAAAAACGCGAGACTGGTGTGCAATTTCCATCTGAACTCGGTGAACTCCAATGGGAATCCCAGTGCAAGGCTGTCGAAGATGTCAAAAACCATTTGAAATGCAATCCTCAAGCTTCCCATGCTATGTCATCTAAGAATTTTGTTGAACCTCTCATCAAATTTTTGAGGGAGGCACATTACCTGGACGATGTAAAAGCTCAGAGGGCTGGATTGGAATTATTACTGACCTTTGTGAGCAAAAGCAGAAATGGGATACCGTATCTACGTGAAGAGGCATATAATATGCTGGCGTATTATCTTGATTCAAAGGTAACCGAAGAAGTTCTTGCCATACTGGAAGTTGTGTCTGGCCACCGGTATTGCGGGTCTAAGATCTCAGAATCTGGTGCACTTACATCCATTCTAAAACTCCTCGACTCCCAGAACAAAGATTTACAAGGACAAGCCATTAAGATTTTGCGTAACTTGTCCTTATCTAAGGACATTTGCTCAAAAATTGTATCTTTGGAGTGCATACCAAAATTGGTTTCTTTCTTTAAAGATGACGTTCTTTCAGGAGTCTGCATTTCTATATTTAAAAATTTGTGCGATACAGAAGAGGCCAGGATTTTGATTGCTGAAACACATGGATGCATTGCTTCTATTGCTGAACTCCTCGAGACGGGCAGCAGTGAGGACCAAGAGCATGCTGTTGATATCCTCGTTTCTTTATGCTCTCAGCGTGATGAATATTGTCAGTTGGTCATGCACGAGGGTGTTATCCCATCGCTTGTCGATTTATCTAACAAGGGGACAGAGAGAGCAAAGACAAGTGCGTTGGAAGTGCGACGGCTCTTAAGAGACTTCAAATATGCCGATGAGCACGAATGCTCTGGATCTACTGACCGTGATGCATCCAGAGACGACGGAAATTGCTCTACTGAAAAGAAATCATCAAAGACTTCAGCATTAATGTCCATGTTCTCAAAACCCTGTTCCCTTGCACTGAAAAAGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

756

Amino Acids

84.34

Weight (kDa)

6.19

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	274 - 343	5e-17	U-box domain
KAP	PF05804	544 - 660	4.6e-07	Kinesin-associated protein (KAP)
ARM_PUB	PF25598	548 - 676	2.7e-07	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36550
fragaria_vesca	FvH4_1g13090 FvH4_1g13090
malus_domestica	MD02G1145600.v1.1 MD15G1259700.v1.1
prunus_persica	Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1
pyrus_communis	pycom02g11520 pycom15g22690
rosa_chinensis	RchiOBHm_Chr2g0101271 RchiOBHm_Chr2g0104721 RchiOBHm_Chr2g0104731
rosa_laevigata	RLG00000017066 RLG00000017354
rosa_multiflora	Rmu_sc0006314.1_g000019
rosa_roxburghii	Rroxscaffold_2G00141450
rosa_rugosa	Rorug02G0099600 Rorug02G0122000 Rorug02G0122100 Rorug02G0122200
rosa_samantha	Rh2AG145600 Rh2AG172300 Rh2BG151000 Rh2BG179900 Rh2CG151400 Rh2CG177400 Rh2DG151100 Rh2DG178600
rosa_wichuraiana	Rw0G008640 Rw0G008650 Rw2G011360 Rw2G013490 Rw2G013550 Rw2G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	1198, 1275
AccIII	TCCGGA	2 cut(s)	848, 1042
AciI	CCGC	1 cut(s)	1629
AclWI	GGATC	3 cut(s)	706, 857, 2149
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	5 cut(s)	315, 715, 1402, 1424, 1846
AcuI	CTGAAG	6 cut(s)	39, 194, 426, 843, 1129, 2193
AfaI	GTAC	3 cut(s)	816, 860, 1021
AfiI	CCNNNNNNNGG	6 cut(s)	472, 1074, 1075, 1138, 1333, 1927
AflII	CTTAAG	1 cut(s)	2101
AgeI	ACCGGT	1 cut(s)	1620
AgsI	TTSAA	9 cut(s)	497, 637, 734, 758, 1211, 1363, 1412, 1572, 2113
AjnI	CCWGG	4 cut(s)	107, 240, 1446, 1868
AjuI	GAANNNNNNNTTGG	4 cut(s)	750, 782, 1777, 1809
AleI	CACNNNNGTG	1 cut(s)	2019
AloI	GAACNNNNNNTCC	2 cut(s)	690, 722
Alw21I	GWGCWC	3 cut(s)	77, 1657, 2130
Alw26I	GTCTC	4 cut(s)	1271, 1919, 2100, 2160
Alw44I	GTGCAC	1 cut(s)	1653
AlwI	GGATC	3 cut(s)	706, 857, 2149
AlwNI	CAGNNNCTG	2 cut(s)	251, 1649
Ama87I	CYCGRG	2 cut(s)	1219, 1922
Aor13HI	TCCGGA	2 cut(s)	848, 1042
AoxI	GGCC	2 cut(s)	1615, 1866
ApaLI	GTGCAC	1 cut(s)	1653
ApeKI	GCWGC	8 cut(s)	14, 32, 131, 144, 219, 688, 1110, 1932
ApoI	RAATTY	5 cut(s)	315, 715, 1402, 1424, 1846
AseI	ATTAAT	1 cut(s)	2216
AsiGI	ACCGGT	1 cut(s)	1620
Asp700I	GAANNNNTTC	3 cut(s)	438, 844, 1587
AspLEI	GCGC	1 cut(s)	1200
AspS9I	GGNCC	4 cut(s)	397, 1045, 1164, 1942
AsuHPI	GGTGA	4 cut(s)	355, 596, 1121, 1319
AvaI	CYCGRG	2 cut(s)	1219, 1922
AvaII	GGWCC	4 cut(s)	397, 1045, 1164, 1942
AxyI	CCTNAGG	1 cut(s)	509
BaeGI	GKGCMC	1 cut(s)	1657
BaeI	ACNNNNGTAYC	2 cut(s)	899, 932
BalI	TGGCCA	1 cut(s)	1617
BarI	GAAGNNNNNNTAC	2 cut(s)	829, 861
BauI	CACGAG	1 cut(s)	2015
Bbv12I	GWGCWC	3 cut(s)	77, 1657, 2130
BbvI	GCAGC	7 cut(s)	44, 131, 143, 231, 700, 1122, 1944
BccI	CCATC	4 cut(s)	409, 1132, 1303, 2038
BceAI	ACGGC	1 cut(s)	2111
BcgI	CGANNNNNNTGC	6 cut(s)	126, 160, 1210, 1244, 1321, 1355
BciT130I	CCWGG	4 cut(s)	109, 242, 1448, 1870
BciVI	GTATCC	2 cut(s)	900, 1512
BcoDI	GTCTC	4 cut(s)	1271, 1919, 2100, 2160
BfaI	CTAG	3 cut(s)	228, 572, 1101
BfmI	CTRYAG	1 cut(s)	1133
BfrI	CTTAAG	1 cut(s)	2101
BfuI	GTATCC	2 cut(s)	900, 1512
BglII	AGATCT	3 cut(s)	351, 554, 1638
BisI	GCNGC	8 cut(s)	15, 33, 132, 145, 220, 689, 1111, 1933
BlsI	GCNGC	8 cut(s)	16, 34, 133, 146, 221, 690, 1112, 1934
Bme1390I	CCNGG	4 cut(s)	109, 242, 1448, 1870
Bme18I	GGWCC	4 cut(s)	397, 1045, 1164, 1942
BmeT110I	CYCGRG	2 cut(s)	1219, 1922
BmgT120I	GGNCC	4 cut(s)	397, 1045, 1164, 1942
BmiI	GGNNCC	5 cut(s)	330, 399, 515, 1047, 1165
BmrFI	CCNGG	4 cut(s)	109, 242, 1448, 1870
BmrI	ACTGGG	3 cut(s)	261, 334, 1321
BmsI	GCATC	5 cut(s)	336, 512, 1886, 2146, 2168
BmuI	ACTGGG	3 cut(s)	261, 334, 1321
BplI	GAGNNNNNCTC	2 cut(s)	665, 697
BpmI	CTGGAG	1 cut(s)	91
BpuEI	CTTGAG	2 cut(s)	342, 1359
BsaAI	YACGTR	1 cut(s)	1532
BsaBI	GATNNNNATC	1 cut(s)	350
BsaJI	CCNNGG	1 cut(s)	783
BsaWI	WCCGGW	3 cut(s)	848, 1042, 1620
Bsc4I	CCNNNNNNNGG	6 cut(s)	472, 1074, 1075, 1138, 1333, 1927
Bse118I	RCCGGY	1 cut(s)	1620
Bse1I	ACTGG	6 cut(s)	256, 329, 1176, 1285, 1327, 1605
Bse21I	CCTNAGG	1 cut(s)	509
Bse3DI	GCAATG	3 cut(s)	214, 987, 1899
Bse8I	GATNNNNATC	1 cut(s)	350
BseAI	TCCGGA	2 cut(s)	848, 1042
BseBI	CCWGG	4 cut(s)	109, 242, 1448, 1870
BseDI	CCNNGG	1 cut(s)	783
BseGI	GGATG	6 cut(s)	262, 503, 906, 1661, 1901, 2159
BseJI	GATNNNNATC	1 cut(s)	350
BseLI	CCNNNNNNNGG	6 cut(s)	472, 1074, 1075, 1138, 1333, 1927
BseMI	GCAATG	3 cut(s)	214, 987, 1899
BseMII	CTCAG	6 cut(s)	77, 696, 702, 1478, 1656, 1997
BseNI	ACTGG	6 cut(s)	256, 329, 1176, 1285, 1327, 1605
BseRI	GAGGAG	2 cut(s)	1667, 1910
BseSI	GKGCMC	1 cut(s)	1657
BseXI	GCAGC	7 cut(s)	44, 131, 143, 231, 700, 1122, 1944
BsgI	GTGCAG	1 cut(s)	1250
Bsh1236I	CGCG	2 cut(s)	1198, 1275
BshFI	GGCC	2 cut(s)	1617, 1868
BshTI	ACCGGT	1 cut(s)	1620
BsiHKAI	GWGCWC	3 cut(s)	77, 1657, 2130
BsiHKCI	CYCGRG	2 cut(s)	1219, 1922
BsiSI	CCGG	3 cut(s)	849, 1043, 1621
BslFI	GGGAC	1 cut(s)	2071
BslI	CCNNNNNNNGG	6 cut(s)	472, 1074, 1075, 1138, 1333, 1927
BsmAI	GTCTC	4 cut(s)	1271, 1919, 2100, 2160
BsmBI	CGTCTC	2 cut(s)	1919, 2160
BsmFI	GGGAC	1 cut(s)	2071
BsmI	GAATGC	2 cut(s)	1267, 2138
BsnI	GGCC	2 cut(s)	1617, 1868
BsoBI	CYCGRG	2 cut(s)	1219, 1922
Bsp1286I	GDGCHC	3 cut(s)	77, 1657, 2130
Bsp13I	TCCGGA	2 cut(s)	848, 1042
Bsp1407I	TGTACA	1 cut(s)	1019
Bsp143I	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
BspACI	CCGC	1 cut(s)	1629
BspANI	GGCC	2 cut(s)	1617, 1868
BspCNI	CTCAG	6 cut(s)	78, 695, 703, 1477, 1655, 1996
BspEI	TCCGGA	2 cut(s)	848, 1042
BspFNI	CGCG	2 cut(s)	1198, 1275
BspLI	GGNNCC	5 cut(s)	330, 399, 515, 1047, 1165
BspPI	GGATC	3 cut(s)	706, 857, 2149
BspQI	GCTCTTC	1 cut(s)	498
BspTI	CTTAAG	1 cut(s)	2101
BsrDI	GCAATG	3 cut(s)	214, 987, 1899
BsrFI	RCCGGY	1 cut(s)	1620
BsrGI	TGTACA	1 cut(s)	1019
BsrI	ACTGG	6 cut(s)	256, 329, 1176, 1285, 1327, 1605
BssAI	RCCGGY	1 cut(s)	1620
BssECI	CCNNGG	1 cut(s)	783
BssMI	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
BssSI	CACGAG	1 cut(s)	2015
BssT1I	CCWWGG	1 cut(s)	783
Bst2BI	CACGAG	1 cut(s)	2015
Bst2UI	CCWGG	4 cut(s)	109, 242, 1448, 1870
Bst4CI	ACNGT	3 cut(s)	11, 1524, 2153
Bst6I	CTCTTC	3 cut(s)	498, 1530, 1857
BstAFI	CTTAAG	1 cut(s)	2101
BstAUI	TGTACA	1 cut(s)	1019
BstBAI	YACGTR	1 cut(s)	1532
BstC8I	GCNNGC	2 cut(s)	1554, 1953
BstEII	GGTNACC	1 cut(s)	1576
BstF5I	GGATG	6 cut(s)	262, 503, 906, 1661, 1901, 2159
BstFNI	CGCG	2 cut(s)	1198, 1275
BstHHI	GCGC	1 cut(s)	1200
BstKTI	GATC	9 cut(s)	354, 373, 461, 557, 701, 865, 1126, 1641, 2144
BstMAI	GTCTC	4 cut(s)	1271, 1919, 2100, 2160
BstMBI	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
BstMWI	GCNNNNNNNGC	3 cut(s)	1385, 1469, 1910
BstNI	CCWGG	4 cut(s)	109, 242, 1448, 1870
BstNSI	RCATGY	2 cut(s)	942, 1955
BstPI	GGTNACC	1 cut(s)	1576
BstSCI	CCNGG	4 cut(s)	107, 240, 1446, 1868
BstSFI	CTRYAG	1 cut(s)	1133
BstSLI	GKGCMC	1 cut(s)	1657
BstUI	CGCG	2 cut(s)	1198, 1275
BstV1I	GCAGC	7 cut(s)	44, 131, 143, 231, 700, 1122, 1944
BstX2I	RGATCY	4 cut(s)	351, 554, 1638, 2141
BstYI	RGATCY	4 cut(s)	351, 554, 1638, 2141
Bsu36I	CCTNAGG	1 cut(s)	509
BsuI	GTATCC	2 cut(s)	900, 1512
BsuRI	GGCC	2 cut(s)	1617, 1868
BtgZI	GCGATG	2 cut(s)	1179, 2016
BtsCI	GGATG	6 cut(s)	262, 503, 906, 1661, 1901, 2159
BtsI	GCAGTG	1 cut(s)	1942
BtsIMutI	CAGTG	4 cut(s)	747, 1334, 1942, 2249
Cac8I	GCNNGC	2 cut(s)	1554, 1953
CaiI	CAGNNNCTG	2 cut(s)	251, 1649
CfoI	GCGC	1 cut(s)	1200
Cfr10I	RCCGGY	1 cut(s)	1620
Cfr13I	GGNCC	4 cut(s)	397, 1045, 1164, 1942
Csp6I	GTAC	3 cut(s)	815, 859, 1020
CspAI	ACCGGT	1 cut(s)	1620
CspCI	CAANNNNNGTGG	2 cut(s)	1607, 1642
CviQI	GTAC	3 cut(s)	815, 859, 1020
DpnI	GATC	9 cut(s)	353, 372, 460, 556, 700, 864, 1125, 1640, 2143
DpnII	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
DraI	TTTAAA	2 cut(s)	1804, 1843
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	3 cut(s)	498, 1530, 1857
EarI	CTCTTC	3 cut(s)	498, 1530, 1857
Eco130I	CCWWGG	1 cut(s)	783
Eco32I	GATATC	1 cut(s)	1963
Eco47I	GGWCC	4 cut(s)	397, 1045, 1164, 1942
Eco57I	CTGAAG	6 cut(s)	39, 194, 426, 843, 1129, 2193
Eco81I	CCTNAGG	1 cut(s)	509
Eco88I	CYCGRG	2 cut(s)	1219, 1922
Eco91I	GGTNACC	1 cut(s)	1576
EcoO109I	RGGNCCY	1 cut(s)	1164
EcoO65I	GGTNACC	1 cut(s)	1576
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	4 cut(s)	107, 240, 1446, 1868
EcoRV	GATATC	1 cut(s)	1963
EcoT14I	CCWWGG	1 cut(s)	783
EcoT22I	ATGCAT	2 cut(s)	1901, 2161
ErhI	CCWWGG	1 cut(s)	783
Esp3I	CGTCTC	2 cut(s)	1919, 2160
FalI	AAGNNNNNCTT	4 cut(s)	524, 556, 1575, 1607
FaqI	GGGAC	1 cut(s)	2071
FauI	CCCGC	1 cut(s)	1622
FauNDI	CATATG	1 cut(s)	892
Fnu4HI	GCNGC	8 cut(s)	15, 33, 132, 145, 220, 689, 1111, 1933
FokI	GGATG	6 cut(s)	269, 490, 913, 1648, 1908, 2146
Fsp4HI	GCNGC	8 cut(s)	15, 33, 132, 145, 220, 689, 1111, 1933
FspBI	CTAG	3 cut(s)	228, 572, 1101
GlaI	GCGC	1 cut(s)	1199
GluI	GCNGC	8 cut(s)	15, 33, 132, 145, 220, 689, 1111, 1933
GsuI	CTGGAG	1 cut(s)	91
HaeIII	GGCC	2 cut(s)	1617, 1868
HapII	CCGG	3 cut(s)	849, 1043, 1621
HhaI	GCGC	1 cut(s)	1200
Hin6I	GCGC	1 cut(s)	1198
HinP1I	GCGC	1 cut(s)	1198
HindIII	AAGCTT	2 cut(s)	304, 1377
HpaII	CCGG	3 cut(s)	849, 1043, 1621
HphI	GGTGA	4 cut(s)	355, 596, 1121, 1319
Hpy166II	GTNNAC	7 cut(s)	233, 397, 1020, 1022, 1089, 1310, 1655
Hpy8I	GTNNAC	7 cut(s)	233, 397, 1020, 1022, 1089, 1310, 1655
Hpy99I	CGWCG	2 cut(s)	2097, 2174
HpyAV	CCTTC	3 cut(s)	526, 991, 1049
HpyCH4III	ACNGT	3 cut(s)	11, 1524, 2153
HpyCH4IV	ACGT	2 cut(s)	1531, 1812
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1385, 1469, 1910
HpySE526I	ACGT	2 cut(s)	1531, 1812
HspAI	GCGC	1 cut(s)	1198
Kpn2I	TCCGGA	2 cut(s)	848, 1042
Kzo9I	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	3 cut(s)	298, 519, 809
Lsp1109I	GCAGC	7 cut(s)	44, 131, 143, 231, 700, 1122, 1944
LweI	GCATC	5 cut(s)	336, 512, 1886, 2146, 2168
MaeI	CTAG	3 cut(s)	228, 572, 1101
MaeII	ACGT	2 cut(s)	1531, 1812
MaeIII	GTNAC	7 cut(s)	5, 247, 584, 929, 1178, 1576, 1727
MalI	GATC	9 cut(s)	353, 372, 460, 556, 700, 864, 1125, 1640, 2143
MboI	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
MflI	RGATCY	4 cut(s)	351, 554, 1638, 2141
MhlI	GDGCHC	3 cut(s)	77, 1657, 2130
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
MlyI	GAGTC	6 cut(s)	233, 788, 973, 1184, 1676, 1833
MmeI	TCCRAC	2 cut(s)	276, 2064
Mox20I	TGGCCA	1 cut(s)	1617
Mph1103I	ATGCAT	2 cut(s)	1901, 2161
MroI	TCCGGA	2 cut(s)	848, 1042
MroXI	GAANNNNTTC	3 cut(s)	438, 844, 1587
MscI	TGGCCA	1 cut(s)	1617
MslI	CAYNNNNRTG	4 cut(s)	832, 992, 1894, 2019
Msp20I	TGGCCA	1 cut(s)	1617
MspCI	CTTAAG	1 cut(s)	2101
MspI	CCGG	3 cut(s)	849, 1043, 1621
MspR9I	CCNGG	4 cut(s)	109, 242, 1448, 1870
Mva1269I	GAATGC	2 cut(s)	1267, 2138
MvaI	CCWGG	4 cut(s)	109, 242, 1448, 1870
MvnI	CGCG	2 cut(s)	1198, 1275
MwoI	GCNNNNNNNGC	3 cut(s)	1385, 1469, 1910
NdeI	CATATG	1 cut(s)	892
NdeII	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
NlaIV	GGNNCC	5 cut(s)	330, 399, 515, 1047, 1165
NmuCI	GTSAC	2 cut(s)	584, 929
NsiI	ATGCAT	2 cut(s)	1901, 2161
NspI	RCATGY	2 cut(s)	942, 1955
OliI	CACNNNNGTG	1 cut(s)	2019
PaeI	GCATGC	1 cut(s)	1955
PaeR7I	CTCGAG	2 cut(s)	1219, 1922
PciSI	GCTCTTC	1 cut(s)	498
PctI	GAATGC	2 cut(s)	1267, 2138
PdmI	GAANNNNTTC	3 cut(s)	438, 844, 1587
PfeI	GAWTC	8 cut(s)	449, 734, 758, 878, 1244, 1322, 1568, 1646
PfoI	TCCNGGA	1 cut(s)	107
PinAI	ACCGGT	1 cut(s)	1620
PkrI	GCNGC	8 cut(s)	16, 34, 133, 146, 221, 690, 1112, 1934
PleI	GAGTC	6 cut(s)	232, 787, 973, 1184, 1676, 1832
PpsI	GAGTC	6 cut(s)	232, 787, 973, 1184, 1676, 1832
Ppu21I	YACGTR	1 cut(s)	1532
PpuMI	RGGWCCY	1 cut(s)	1164
PshBI	ATTAAT	1 cut(s)	2216
Psp5II	RGGWCCY	1 cut(s)	1164
Psp6I	CCWGG	4 cut(s)	107, 240, 1446, 1868
PspEI	GGTNACC	1 cut(s)	1576
PspGI	CCWGG	4 cut(s)	107, 240, 1446, 1868
PspN4I	GGNNCC	5 cut(s)	330, 399, 515, 1047, 1165
PspPI	GGNCC	4 cut(s)	397, 1045, 1164, 1942
PspPPI	RGGWCCY	1 cut(s)	1164
PspXI	VCTCGAGB	1 cut(s)	1219
PstNI	CAGNNNCTG	2 cut(s)	251, 1649
PsuI	RGATCY	4 cut(s)	351, 554, 1638, 2141
RsaI	GTAC	3 cut(s)	816, 860, 1021
RsaNI	GTAC	3 cut(s)	815, 859, 1020
RseI	CAYNNNNRTG	4 cut(s)	832, 992, 1894, 2019
SapI	GCTCTTC	1 cut(s)	498
SatI	GCNGC	8 cut(s)	15, 33, 132, 145, 220, 689, 1111, 1933
Sau3AI	GATC	9 cut(s)	351, 370, 458, 554, 698, 862, 1123, 1638, 2141
Sau96I	GGNCC	4 cut(s)	397, 1045, 1164, 1942
SchI	GAGTC	6 cut(s)	233, 788, 973, 1184, 1676, 1833
ScrFI	CCNGG	4 cut(s)	109, 242, 1448, 1870
SduI	GDGCHC	3 cut(s)	77, 1657, 2130
SfaNI	GCATC	5 cut(s)	336, 512, 1886, 2146, 2168
SfcI	CTRYAG	1 cut(s)	1133
Sfr274I	CTCGAG	2 cut(s)	1219, 1922
SinI	GGWCC	4 cut(s)	397, 1045, 1164, 1942
SlaI	CTCGAG	2 cut(s)	1219, 1922
SmiMI	CAYNNNNRTG	4 cut(s)	832, 992, 1894, 2019
SmlI	CTYRAG	5 cut(s)	357, 1219, 1374, 1922, 2101
SmoI	CTYRAG	5 cut(s)	357, 1219, 1374, 1922, 2101
SphI	GCATGC	1 cut(s)	1955
SsiI	CCGC	1 cut(s)	1629
SspI	AATATT	1 cut(s)	1997
SspMI	CTAG	3 cut(s)	228, 572, 1101
StyD4I	CCNGG	4 cut(s)	107, 240, 1446, 1868
StyI	CCWWGG	1 cut(s)	783
TaaI	ACNGT	3 cut(s)	11, 1524, 2153
TaiI	ACGT	2 cut(s)	1534, 1815
TatI	WGTACW	1 cut(s)	1019
TfiI	GAWTC	8 cut(s)	449, 734, 758, 878, 1244, 1322, 1568, 1646
TscAI	CASTG	4 cut(s)	754, 1334, 1942, 2256
TseFI	GTSAC	2 cut(s)	584, 929
TseI	GCWGC	8 cut(s)	14, 32, 131, 144, 219, 688, 1110, 1932
Tsp45I	GTSAC	2 cut(s)	584, 929
TspDTI	ATGAA	9 cut(s)	50, 431, 495, 606, 613, 909, 1010, 1133, 2007
TspGWI	ACGGA	1 cut(s)	2187
TspRI	CASTG	4 cut(s)	754, 1334, 1942, 2256
Vha464I	CTTAAG	1 cut(s)	2101
VneI	GTGCAC	1 cut(s)	1653
VpaK11BI	GGWCC	4 cut(s)	397, 1045, 1164, 1942
VspI	ATTAAT	1 cut(s)	2216
XapI	RAATTY	5 cut(s)	315, 715, 1402, 1424, 1846
XceI	RCATGY	2 cut(s)	942, 1955
XhoI	CTCGAG	2 cut(s)	1219, 1922
XmnI	GAANNNNTTC	3 cut(s)	438, 844, 1587
XspI	CTAG	3 cut(s)	228, 572, 1101
Zsp2I	ATGCAT	2 cut(s)	1901, 2161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.