FvH4_1g17920

Adiponectin receptor protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
10420933 .. 10424615
3683 bp
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UTR
Exon/CDS
Intron
FvH4_1g17920.t2

Sequence Viewer

Length: 918 bp
ATGTTTGGACATGTCGTTGATCTTCATGCCTTACCTGATGTGCTGAAAAATGCTGATCTTCACAAGTTGCATGAGGAACTCATGACATGCCTCCCGTCGTTACCCAACATGCCTGCTTTGAACAAACTTAGGGAGGAGTTAAAGACTTCGTTGCCTTCAATGGATCTACTTCCCTCGCTCTCTGGTTGGCATGTTATGGAACTTCTGAATAATTGTTTGCCTCAGAGGTTCTCCCATGGCAACCACACTGATGTTTGTGTTCTGCATAGCATGAAGGAAGATTTAGCAAACATAATAGCACCGTTGGTGATGAGACCAATTACACGATGGCCATTTTTCGCTTTCTTGGGAGGAGCAATGTTTTGCTTGCTGTCCAGCAGTGCTTGCCATCTTCTCTCTTGCCACTCTGAGCGAACGTCATATATCATGCTCAGGCTGGACTATGCTGGAATTGCAGCCCTTATATCCACCTCATTCTACCCTCTTGTTTACTACTCCTTCATGTGCAACCCTTTCTTCTGCACCCTTTACATGGGGTTCATAACCATCTTAGGAATTGCCTCAGTCTTGGGTTCCCTCTTGCCTGTCTTTCAAACTCCTCAGTACCGTAGTGTCCGTGCATCTCTTTTCTTCGGCATGGGCTTGTCGGGCATTCTTCCTATCCTCCACAAGCTTATCTTGTTCTCAGACCAACCTGAGGCGCTCCACACAACTGGGTATGAGATTCTCATGGGGATTTTCTACGGAGTTGGAGCACTGGTTTATGCAACAAGGATTCCAGAACGATGGATGCCTGGGAAATTCGACATTGCAGGGCACAGCCACCAACTGTTCCACATACTGGTAGTTGCAGGCGCATACACTCATTACCGTGCAGGGCTTGTTTACTTGAAGTGGCGTGATTTAGAAGGTTGCTGA
Functional Annotation

Protein Analysis

306

Amino Acids

34.26

Weight (kDa)

6.96

Isoelectric Point (pI)

54.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HlyIII PF03006 76 - 105 2.1e-06 Haemolysin-III related
HlyIII PF03006 209 - 394 4.6e-55 Haemolysin-III related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 841
AclWI GGATC 1 cut(s) 171
AcoI YGGCCR 1 cut(s) 329
AcsI RAATTY 1 cut(s) 800
AfaI GTAC 1 cut(s) 605
AfiI CCNNNNNNNGG 3 cut(s) 532, 697, 841
AflIII ACRYGT 1 cut(s) 10
AgsI TTSAA 4 cut(s) 121, 159, 593, 892
AjnI CCWGG 1 cut(s) 793
AluBI AGCT 1 cut(s) 673
AluI AGCT 1 cut(s) 673
Alw21I GWGCWC 1 cut(s) 757
Alw26I GTCTC 1 cut(s) 307
AlwI GGATC 1 cut(s) 171
AoxI GGCC 1 cut(s) 329
ApeKI GCWGC 1 cut(s) 455
ApoI RAATTY 1 cut(s) 800
AspLEI GCGC 2 cut(s) 703, 857
AsuHPI GGTGA 1 cut(s) 319
AxyI CCTNAGG 1 cut(s) 696
BaeGI GKGCMC 1 cut(s) 819
BalI TGGCCA 1 cut(s) 331
Bbv12I GWGCWC 1 cut(s) 757
BbvI GCAGC 1 cut(s) 467
BccI CCATC 4 cut(s) 321, 396, 554, 780
BciT130I CCWGG 1 cut(s) 795
BcoDI GTCTC 1 cut(s) 307
BfoI RGCGCY 1 cut(s) 704
BisI GCNGC 1 cut(s) 456
BlsI GCNGC 1 cut(s) 457
Bme1390I CCNGG 1 cut(s) 795
BmiI GGNNCC 1 cut(s) 574
BmrFI CCNGG 1 cut(s) 795
BmrI ACTGGG 1 cut(s) 723
BmsI GCATC 2 cut(s) 629, 780
BmuI ACTGGG 1 cut(s) 723
Bpu10I CCTNAGC 1 cut(s) 431
BsaI GGTCTC 1 cut(s) 307
BsaJI CCNNGG 2 cut(s) 235, 794
BsaXI ACNNNNNCTCC 2 cut(s) 744, 774
Bsc4I CCNNNNNNNGG 3 cut(s) 532, 697, 841
Bse1I ACTGG 3 cut(s) 718, 762, 846
Bse21I CCTNAGG 1 cut(s) 696
Bse3DI GCAATG 2 cut(s) 363, 807
BseBI CCWGG 1 cut(s) 795
BseDI CCNNGG 2 cut(s) 235, 794
BseGI GGATG 1 cut(s) 795
BseLI CCNNNNNNNGG 3 cut(s) 532, 697, 841
BseMI GCAATG 2 cut(s) 363, 807
BseMII CTCAG 7 cut(s) 236, 399, 445, 576, 614, 687, 699
BseNI ACTGG 3 cut(s) 718, 762, 846
BseRI GAGGAG 3 cut(s) 149, 366, 588
BseSI GKGCMC 1 cut(s) 819
BseXI GCAGC 1 cut(s) 467
BsgI GTGCAG 2 cut(s) 505, 894
BshFI GGCC 1 cut(s) 331
BsiHKAI GWGCWC 1 cut(s) 757
BslI CCNNNNNNNGG 3 cut(s) 532, 697, 841
BsmAI GTCTC 1 cut(s) 307
BsmI GAATGC 1 cut(s) 651
BsnI GGCC 1 cut(s) 331
Bso31I GGTCTC 1 cut(s) 307
Bsp1286I GDGCHC 2 cut(s) 757, 819
Bsp143I GATC 3 cut(s) 19, 55, 163
Bsp19I CCATGG 1 cut(s) 235
BspANI GGCC 1 cut(s) 331
BspCNI CTCAG 7 cut(s) 235, 400, 444, 575, 613, 688, 698
BspHI TCATGA 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 574
BspPI GGATC 1 cut(s) 171
BspTNI GGTCTC 1 cut(s) 307
BsrDI GCAATG 2 cut(s) 363, 807
BsrI ACTGG 3 cut(s) 718, 762, 846
BssECI CCNNGG 2 cut(s) 235, 794
BssMI GATC 3 cut(s) 19, 55, 163
BssT1I CCWWGG 1 cut(s) 235
Bst2UI CCWGG 1 cut(s) 795
Bst4CI ACNGT 4 cut(s) 303, 608, 831, 872
BstAPI GCANNNNNTGC 1 cut(s) 384
BstC8I GCNNGC 4 cut(s) 114, 368, 385, 853
BstDEI CTNAG 9 cut(s) 128, 222, 408, 431, 550, 562, 600, 685, 696
BstDSI CCRYGG 1 cut(s) 235
BstF5I GGATG 1 cut(s) 795
BstH2I RGCGCY 1 cut(s) 704
BstHHI GCGC 2 cut(s) 703, 857
BstKTI GATC 3 cut(s) 22, 58, 166
BstMAI GTCTC 1 cut(s) 307
BstMBI GATC 3 cut(s) 19, 55, 163
BstMWI GCNNNNNNNGC 3 cut(s) 384, 452, 648
BstNI CCWGG 1 cut(s) 795
BstNSI RCATGY 4 cut(s) 14, 90, 112, 194
BstSCI CCNGG 1 cut(s) 793
BstSLI GKGCMC 1 cut(s) 819
BstV1I GCAGC 1 cut(s) 467
BstX2I RGATCY 1 cut(s) 163
BstXI CCANNNNNNTGG 2 cut(s) 713, 786
BstYI RGATCY 1 cut(s) 163
Bsu36I CCTNAGG 1 cut(s) 696
BsuRI GGCC 1 cut(s) 331
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 1 cut(s) 795
BtsI GCAGTG 1 cut(s) 385
BtsIMutI CAGTG 3 cut(s) 246, 385, 755
Cac8I GCNNGC 4 cut(s) 114, 368, 385, 853
CciI TCATGA 1 cut(s) 81
CfoI GCGC 2 cut(s) 703, 857
Csp6I GTAC 1 cut(s) 604
CviJI RGCY 7 cut(s) 331, 436, 458, 642, 673, 822, 880
CviKI_1 RGCY 7 cut(s) 331, 436, 458, 642, 673, 822, 880
CviQI GTAC 1 cut(s) 604
DdeI CTNAG 9 cut(s) 128, 222, 408, 431, 550, 562, 600, 685, 696
DpnI GATC 3 cut(s) 21, 57, 165
DpnII GATC 3 cut(s) 19, 55, 163
EaeI YGGCCR 1 cut(s) 329
Eco130I CCWWGG 1 cut(s) 235
Eco31I GGTCTC 1 cut(s) 307
Eco81I CCTNAGG 1 cut(s) 696
EcoRII CCWGG 1 cut(s) 793
EcoT14I CCWWGG 1 cut(s) 235
ErhI CCWWGG 1 cut(s) 235
FalI AAGNNNNNCTT 2 cut(s) 662, 694
Fnu4HI GCNGC 1 cut(s) 456
FokI GGATG 1 cut(s) 802
Fsp4HI GCNGC 1 cut(s) 456
GlaI GCGC 2 cut(s) 702, 856
GluI GCNGC 1 cut(s) 456
HaeII RGCGCY 1 cut(s) 704
HaeIII GGCC 1 cut(s) 331
HhaI GCGC 2 cut(s) 703, 857
Hin6I GCGC 2 cut(s) 701, 855
HinP1I GCGC 2 cut(s) 701, 855
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 2 cut(s) 724, 775
HphI GGTGA 1 cut(s) 319
Hpy166II GTNNAC 2 cut(s) 490, 886
Hpy188I TCNGA 4 cut(s) 207, 225, 409, 688
Hpy188III TCNNGA 2 cut(s) 82, 779
Hpy8I GTNNAC 2 cut(s) 490, 886
Hpy99I CGWCG 1 cut(s) 100
HpyAV CCTTC 4 cut(s) 165, 268, 508, 902
HpyCH4III ACNGT 4 cut(s) 303, 608, 831, 872
HpyCH4IV ACGT 1 cut(s) 416
HpyF10VI GCNNNNNNNGC 3 cut(s) 384, 452, 648
HpyF3I CTNAG 9 cut(s) 128, 222, 408, 431, 550, 562, 600, 685, 696
HpySE526I ACGT 1 cut(s) 416
HspAI GCGC 2 cut(s) 701, 855
Kzo9I GATC 3 cut(s) 19, 55, 163
LmnI GCTCC 3 cut(s) 353, 708, 752
Lsp1109I GCAGC 1 cut(s) 467
LweI GCATC 2 cut(s) 629, 780
MaeII ACGT 1 cut(s) 416
MaeIII GTNAC 1 cut(s) 99
MalI GATC 3 cut(s) 21, 57, 165
MboI GATC 3 cut(s) 19, 55, 163
MboII GAAGA 7 cut(s) 14, 50, 290, 383, 508, 622, 647
MflI RGATCY 1 cut(s) 163
MhlI GDGCHC 2 cut(s) 757, 819
MlsI TGGCCA 1 cut(s) 331
MluCI AATT 5 cut(s) 211, 318, 450, 555, 800
MluNI TGGCCA 1 cut(s) 331
MmeI TCCRAC 1 cut(s) 730
Mox20I TGGCCA 1 cut(s) 331
MscI TGGCCA 1 cut(s) 331
MseI TTAA 1 cut(s) 140
MslI CAYNNNNRTG 2 cut(s) 249, 870
Msp20I TGGCCA 1 cut(s) 331
MspR9I CCNGG 1 cut(s) 795
Mva1269I GAATGC 1 cut(s) 651
MvaI CCWGG 1 cut(s) 795
MwoI GCNNNNNNNGC 3 cut(s) 384, 452, 648
NcoI CCATGG 1 cut(s) 235
NdeII GATC 3 cut(s) 19, 55, 163
NlaIV GGNNCC 1 cut(s) 574
NspI RCATGY 4 cut(s) 14, 90, 112, 194
PagI TCATGA 1 cut(s) 81
PciI ACATGT 1 cut(s) 10
PctI GAATGC 1 cut(s) 651
PfeI GAWTC 2 cut(s) 724, 775
PflMI CCANNNNNTGG 1 cut(s) 841
PkrI GCNGC 1 cut(s) 457
PscI ACATGT 1 cut(s) 10
Psp6I CCWGG 1 cut(s) 793
PspGI CCWGG 1 cut(s) 793
PspN4I GGNNCC 1 cut(s) 574
PsuI RGATCY 1 cut(s) 163
RsaI GTAC 1 cut(s) 605
RsaNI GTAC 1 cut(s) 604
RseI CAYNNNNRTG 2 cut(s) 249, 870
SaqAI TTAA 1 cut(s) 140
SatI GCNGC 1 cut(s) 456
Sau3AI GATC 3 cut(s) 19, 55, 163
ScrFI CCNGG 1 cut(s) 795
SduI GDGCHC 2 cut(s) 757, 819
SetI ASST 7 cut(s) 37, 230, 419, 473, 675, 697, 913
SfaNI GCATC 2 cut(s) 629, 780
SmiMI CAYNNNNRTG 2 cut(s) 249, 870
Sse9I AATT 5 cut(s) 211, 318, 450, 555, 800
StyD4I CCNGG 1 cut(s) 793
StyI CCWWGG 1 cut(s) 235
TaaI ACNGT 4 cut(s) 303, 608, 831, 872
TaiI ACGT 1 cut(s) 419
TaqI TCGA 1 cut(s) 804
TasI AATT 5 cut(s) 211, 318, 450, 555, 800
TfiI GAWTC 2 cut(s) 724, 775
Tru1I TTAA 1 cut(s) 140
Tru9I TTAA 1 cut(s) 140
TscAI CASTG 3 cut(s) 253, 385, 762
TseI GCWGC 1 cut(s) 455
TspDTI ATGAA 4 cut(s) 14, 287, 490, 529
TspGWI ACGGA 2 cut(s) 605, 759
TspRI CASTG 3 cut(s) 253, 385, 762
Van91I CCANNNNNTGG 1 cut(s) 841
XapI RAATTY 1 cut(s) 800
XceI RCATGY 4 cut(s) 14, 90, 112, 194
XcmI CCANNNNNNNNNTGG 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.