Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001650

Physical Location & Seq

Genomic Coordinates Reverse (-)

22534108 .. 22538032

Gene Structure 3925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G219200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGGCAGTGAGATCCAGAATTTTGAAGATTCAAAACTGTCATCTGAAGCAATGGAGGACCATCAGGCATGTTCACCGAAGGAAGGTAAAGGAAAGCGGCTGTGGAAGAAGGTGAAGTATCAGCTGGTTGAGTACCACACTTTACCCAACTACTTAAGGGACAACGAGTACATTTTGGGCCATTACCGGTCCGAATGGCCGTTGAAGCAGGTCTTGCTTAGTATGTTTACTATCCACAATGAGACGCTAAATGTTTGGACGCATTTGATCGGGTTCTTCCTTTTTCTCTCCCTGACCATATACACTGCAATTAAGCTTCCAGAGGTCGTTGATCTTCATGCTCTACAGCATTTTCCTGATGTGCTGAAAAAAGCTGATTTGCACAAATTACATGAAGAATTCATGACATGCCTCCCTTCCTTACCCAACATGCCTGATCTGAACAGACTTAGAGGAGAGTTGAAGACTTCATTACCTTCAATGGATCTGCTCCCGTCACTCTCTGGTTGGCATGTCATGGAACTTCTGAATAATTGTTTGCCTCAACGATTCTCCCATGGCAACCAAACTGATGTTTGTGTTCTGAGTAGCATGAAGGAGGATTTAGCGAACATAGTAGCACCACTTATGCTGAGGCCAATCACACGATGGCCATTCTTTGCTTTCTTGGGAGGAGCCATGTTTTGCTTGTTGTCCAGCAGTGCGTGCCATCTTCTCTCTTGCCATTCTGAGCGAATGTCATATATCATGCTCAGACTGGACTATGCTGGAATTGCAGCCCTTATATCTACCTCATTCTACCCCCTTGTCTACTACTCCTTCATGTGTAACCCTTTCTTCTGCAACCTCTACATGGGATTTATAACCCTCTTGGGAATTGCTACAGTATTGGTTTCCCTCATACCAGTCTTTCAGAATCCTGAATATCGTATTGTTCGTGTATCTCTATTTTTAAGCATGGGCATGTCTGGGATTTTACCTGTTATGCACAAGCTTGTCTTGTTTTCTGATCAACCTGAGGCACTCCACACAACCGGGTATGAGATTCTAATGGGGGCTCTCTATGGGGTTGGAGCCTTGGTTTATGCCACAAGGGTTCCGGAACGATGGATGCCTGGGAAATTCGACATTGCAGGGCATAGCCACCAATTGTTTCACATATTAGTAGTGGCAGGCGCGTACACTCATTACCGTGCAGGACTTGTTTACCTCAAATGGCGCGATCTAGAAGGTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009719 GO:0009725 GO:0009743 GO:0009744 GO:0010033 GO:0034285 GO:0042221 GO:0050896 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04152 ko04211 ko04920 ko04932 map04152 map04211 map04920 map04932

Pfam Domains

Protein Families

HlyIII

Protein Analysis

413

Amino Acids

47.03

Weight (kDa)

6.82

Isoelectric Point (pI)

51.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37680 AT4G37680 AT4G37680 AT4G37680 AT4G37680 AT4G38320
fragaria_vesca	FvH4_1g17920 FvH4_1g17920 FvH4_1g17920 FvH4_5g20320 FvH4_5g20320 FvH4_5g20320
malus_domestica	MD02G1187800.v1.1 MD04G1053000.v1.1 MD06G1047400.v1.1 MD15G1298700.v1.1
prunus_persica	Prupe.5G057500_v2.0.a1 Prupe.5G057500_v2.0.a1 Prupe.5G057500_v2.0.a1 Prupe.5G057500_v2.0.a1 Prupe.6G219200_v2.0.a1 Prupe.6G219200_v2.0.a1
pyrus_communis	pycom02g15270 pycom04g04650 pycom06g04030 pycom15g26150
rosa_chinensis	RchiOBHm_Chr2g0108351 RchiOBHm_Chr7g0205491
rosa_laevigata	RLG00000003374 RLG00000017663
rosa_multiflora	Rmu_sc0002237.1_g000016 Rmu_sc0002372.1_g000016 Rmu_sc0041421.1_g000001
rosa_roxburghii	Rroxscaffold_2G00135220 Rroxscaffold_3G00252180
rosa_rugosa	Rorug02G0152200 Rorug07G0091600 Rorug07G0091700
rosa_samantha	Rh2AG201200 Rh2BG214100 Rh2CG205500 Rh2DG208600 Rh7AG222300 Rh7BG217700 Rh7CG234700 Rh7DG228700
rosa_wichuraiana	Rw2G016020 Rw2G016080 Rw7G019190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	863
Acc36I	ACCTGC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	810
AccII	CGCG	2 cut(s)	1178, 1221
AccIII	TCCGGA	1 cut(s)	1099
AciI	CCGC	1 cut(s)	97
AclWI	GGATC	2 cut(s)	7, 492
AcoI	YGGCCR	2 cut(s)	197, 650
AcsI	RAATTY	3 cut(s)	19, 398, 1121
AcuI	CTGAAG	1 cut(s)	66
AfaI	GTAC	3 cut(s)	134, 170, 1181
AfiI	CCNNNNNNNGG	2 cut(s)	83, 853
AflII	CTTAAG	1 cut(s)	154
AgeI	ACCGGT	1 cut(s)	186
AgsI	TTSAA	5 cut(s)	26, 33, 205, 463, 480
AjnI	CCWGG	1 cut(s)	1114
AluBI	AGCT	4 cut(s)	124, 316, 374, 994
AluI	AGCT	4 cut(s)	124, 316, 374, 994
Alw26I	GTCTC	1 cut(s)	236
AlwI	GGATC	2 cut(s)	7, 492
Aor13HI	TCCGGA	1 cut(s)	1099
AoxI	GGCC	4 cut(s)	178, 197, 635, 650
ApeKI	GCWGC	1 cut(s)	776
ApoI	RAATTY	3 cut(s)	19, 398, 1121
AsiGI	ACCGGT	1 cut(s)	186
AspLEI	GCGC	2 cut(s)	1178, 1221
AspS9I	GGNCC	3 cut(s)	58, 178, 189
AsuC2I	CCSGG	1 cut(s)	1036
AsuHPI	GGTGA	2 cut(s)	66, 124
AvaII	GGWCC	2 cut(s)	58, 189
AxyI	CCTNAGG	1 cut(s)	1017
BalI	TGGCCA	1 cut(s)	652
BanII	GRGCYC	1 cut(s)	1060
BbsI	GAAGAC	1 cut(s)	470
BbvCI	CCTCAGC	1 cut(s)	632
BbvI	GCAGC	1 cut(s)	788
BccI	CCATC	4 cut(s)	69, 642, 717, 1101
BceAI	ACGGC	1 cut(s)	184
BciT130I	CCWGG	1 cut(s)	1116
BclI	TGATCA	1 cut(s)	1009
BcnI	CCSGG	1 cut(s)	1036
BcoDI	GTCTC	1 cut(s)	236
BfaI	CTAG	1 cut(s)	1226
BfmI	CTRYAG	2 cut(s)	344, 882
BfrI	CTTAAG	1 cut(s)	154
BfuAI	ACCTGC	1 cut(s)	199
BisI	GCNGC	2 cut(s)	98, 777
BlsI	GCNGC	2 cut(s)	99, 778
Bme1390I	CCNGG	2 cut(s)	1036, 1116
Bme18I	GGWCC	2 cut(s)	58, 189
BmgT120I	GGNCC	3 cut(s)	58, 178, 189
BmiI	GGNNCC	3 cut(s)	676, 1075, 1098
BmrFI	CCNGG	2 cut(s)	1036, 1116
BmsI	GCATC	1 cut(s)	1101
BpiI	GAAGAC	1 cut(s)	470
Bpu10I	CCTNAGC	1 cut(s)	632
BpuMI	CCSGG	1 cut(s)	1036
BsaJI	CCNNGG	3 cut(s)	556, 1077, 1115
BsaWI	WCCGGW	2 cut(s)	186, 1099
BsaXI	ACNNNNNCTCC	2 cut(s)	1065, 1095
Bsc4I	CCNNNNNNNGG	2 cut(s)	83, 853
Bse118I	RCCGGY	1 cut(s)	186
Bse1I	ACTGG	2 cut(s)	762, 905
Bse21I	CCTNAGG	1 cut(s)	1017
Bse3DI	GCAATG	2 cut(s)	57, 1128
BseAI	TCCGGA	1 cut(s)	1099
BseBI	CCWGG	1 cut(s)	1116
BseDI	CCNNGG	3 cut(s)	556, 1077, 1115
BseGI	GGATG	1 cut(s)	1116
BseLI	CCNNNNNNNGG	2 cut(s)	83, 853
BseMI	GCAATG	2 cut(s)	57, 1128
BseMII	CTCAG	5 cut(s)	575, 623, 720, 766, 1008
BseNI	ACTGG	2 cut(s)	762, 905
BseRI	GAGGAG	2 cut(s)	468, 687
BseXI	GCAGC	1 cut(s)	788
BsgI	GTGCAG	1 cut(s)	1215
Bsh1236I	CGCG	2 cut(s)	1178, 1221
BshFI	GGCC	4 cut(s)	180, 199, 637, 652
BshTI	ACCGGT	1 cut(s)	186
BsiSI	CCGG	3 cut(s)	187, 1035, 1100
BslFI	GGGAC	1 cut(s)	173
BslI	CCNNNNNNNGG	2 cut(s)	83, 853
BsmAI	GTCTC	1 cut(s)	236
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	173
BsnI	GGCC	4 cut(s)	180, 199, 637, 652
Bsp1286I	GDGCHC	1 cut(s)	1060
Bsp13I	TCCGGA	1 cut(s)	1099
Bsp143I	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
Bsp19I	CCATGG	1 cut(s)	556
BspACI	CCGC	1 cut(s)	97
BspANI	GGCC	4 cut(s)	180, 199, 637, 652
BspCNI	CTCAG	5 cut(s)	576, 624, 721, 765, 1009
BspEI	TCCGGA	1 cut(s)	1099
BspFNI	CGCG	2 cut(s)	1178, 1221
BspHI	TCATGA	1 cut(s)	402
BspLI	GGNNCC	3 cut(s)	676, 1075, 1098
BspMI	ACCTGC	1 cut(s)	199
BspPI	GGATC	2 cut(s)	7, 492
BspTI	CTTAAG	1 cut(s)	154
BsrDI	GCAATG	2 cut(s)	57, 1128
BsrFI	RCCGGY	1 cut(s)	186
BsrI	ACTGG	2 cut(s)	762, 905
BssAI	RCCGGY	1 cut(s)	186
BssECI	CCNNGG	3 cut(s)	556, 1077, 1115
BssMI	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
BssT1I	CCWWGG	2 cut(s)	556, 1077
Bst2UI	CCWGG	1 cut(s)	1116
Bst4CI	ACNGT	3 cut(s)	39, 886, 1193
BstAFI	CTTAAG	1 cut(s)	154
BstAPI	GCANNNNNTGC	2 cut(s)	214, 705
BstC8I	GCNNGC	2 cut(s)	706, 1174
BstDEI	CTNAG	7 cut(s)	218, 449, 584, 632, 729, 752, 1017
BstDSI	CCRYGG	1 cut(s)	556
BstF5I	GGATG	1 cut(s)	1116
BstFNI	CGCG	2 cut(s)	1178, 1221
BstHHI	GCGC	2 cut(s)	1178, 1221
BstKTI	GATC	7 cut(s)	15, 270, 334, 439, 487, 1012, 1225
BstMAI	GTCTC	1 cut(s)	236
BstMBI	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
BstMWI	GCNNNNNNNGC	4 cut(s)	205, 214, 705, 773
BstNI	CCWGG	1 cut(s)	1116
BstNSI	RCATGY	5 cut(s)	72, 411, 433, 515, 967
BstSCI	CCNGG	2 cut(s)	1034, 1114
BstSFI	CTRYAG	2 cut(s)	344, 882
BstUI	CGCG	2 cut(s)	1178, 1221
BstV1I	GCAGC	1 cut(s)	788
BstV2I	GAAGAC	1 cut(s)	470
BstX2I	RGATCY	2 cut(s)	12, 484
BstYI	RGATCY	2 cut(s)	12, 484
Bsu36I	CCTNAGG	1 cut(s)	1017
BsuRI	GGCC	4 cut(s)	180, 199, 637, 652
BtgI	CCRYGG	1 cut(s)	556
BtsCI	GGATG	1 cut(s)	1116
BtsI	GCAGTG	3 cut(s)	13, 303, 706
BtsIMutI	CAGTG	3 cut(s)	13, 303, 706
BveI	ACCTGC	1 cut(s)	199
Cac8I	GCNNGC	2 cut(s)	706, 1174
CciI	TCATGA	1 cut(s)	402
CfoI	GCGC	2 cut(s)	1178, 1221
Cfr10I	RCCGGY	1 cut(s)	186
Cfr13I	GGNCC	3 cut(s)	58, 178, 189
CpoI	CGGWCCG	1 cut(s)	189
CseI	GACGC	2 cut(s)	253, 268
Csp6I	GTAC	3 cut(s)	133, 169, 1180
CspAI	ACCGGT	1 cut(s)	186
CspI	CGGWCCG	1 cut(s)	189
CviQI	GTAC	3 cut(s)	133, 169, 1180
DdeI	CTNAG	7 cut(s)	218, 449, 584, 632, 729, 752, 1017
DpnI	GATC	7 cut(s)	14, 269, 333, 438, 486, 1011, 1224
DpnII	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
EaeI	YGGCCR	2 cut(s)	197, 650
Eco130I	CCWWGG	2 cut(s)	556, 1077
Eco24I	GRGCYC	1 cut(s)	1060
Eco47I	GGWCC	2 cut(s)	58, 189
Eco57I	CTGAAG	1 cut(s)	66
Eco81I	CCTNAGG	1 cut(s)	1017
EcoRI	GAATTC	1 cut(s)	398
EcoRII	CCWGG	1 cut(s)	1114
EcoT14I	CCWWGG	2 cut(s)	556, 1077
EcoT38I	GRGCYC	1 cut(s)	1060
ErhI	CCWWGG	2 cut(s)	556, 1077
Esp3I	CGTCTC	1 cut(s)	236
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 983, 1015
FaqI	GGGAC	1 cut(s)	173
FbaI	TGATCA	1 cut(s)	1009
FblI	GTMKAC	1 cut(s)	810
Fnu4HI	GCNGC	2 cut(s)	98, 777
FokI	GGATG	1 cut(s)	1123
FriOI	GRGCYC	1 cut(s)	1060
Fsp4HI	GCNGC	2 cut(s)	98, 777
FspBI	CTAG	1 cut(s)	1226
GlaI	GCGC	2 cut(s)	1177, 1220
GluI	GCNGC	2 cut(s)	98, 777
HaeIII	GGCC	4 cut(s)	180, 199, 637, 652
HapII	CCGG	3 cut(s)	187, 1035, 1100
HgaI	GACGC	2 cut(s)	253, 268
HhaI	GCGC	2 cut(s)	1178, 1221
Hin6I	GCGC	2 cut(s)	1176, 1219
HinP1I	GCGC	2 cut(s)	1176, 1219
HindIII	AAGCTT	2 cut(s)	314, 992
HinfI	GANTC	4 cut(s)	29, 549, 916, 1045
HpaII	CCGG	3 cut(s)	187, 1035, 1100
HphI	GGTGA	2 cut(s)	66, 124
Hpy166II	GTNNAC	5 cut(s)	74, 228, 811, 1182, 1207
Hpy188I	TCNGA	9 cut(s)	46, 193, 441, 528, 585, 730, 755, 915, 1009
Hpy188III	TCNNGA	7 cut(s)	16, 320, 356, 403, 920, 1100, 1226
Hpy8I	GTNNAC	5 cut(s)	74, 228, 811, 1182, 1207
HpyAV	CCTTC	8 cut(s)	73, 77, 103, 426, 486, 589, 829, 1223
HpyCH4III	ACNGT	3 cut(s)	39, 886, 1193
HpyCH4V	TGCA	7 cut(s)	308, 382, 776, 843, 988, 1133, 1196
HpyF10VI	GCNNNNNNNGC	4 cut(s)	205, 214, 705, 773
HpyF3I	CTNAG	7 cut(s)	218, 449, 584, 632, 729, 752, 1017
HspAI	GCGC	2 cut(s)	1176, 1219
Kpn2I	TCCGGA	1 cut(s)	1099
Ksp22I	TGATCA	1 cut(s)	1009
Kzo9I	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
LmnI	GCTCC	3 cut(s)	495, 674, 1073
Lsp1109I	GCAGC	1 cut(s)	788
LweI	GCATC	1 cut(s)	1101
MaeI	CTAG	1 cut(s)	1226
MaeIII	GTNAC	2 cut(s)	495, 827
MalI	GATC	7 cut(s)	14, 269, 333, 438, 486, 1011, 1224
MboI	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
MboII	GAAGA	8 cut(s)	38, 118, 268, 326, 407, 475, 704, 829
MfeI	CAATTG	1 cut(s)	1148
MflI	RGATCY	2 cut(s)	12, 484
MhlI	GDGCHC	1 cut(s)	1060
MlsI	TGGCCA	1 cut(s)	652
MluCI	AATT	9 cut(s)	19, 309, 386, 398, 532, 771, 876, 1121, 1148
MluNI	TGGCCA	1 cut(s)	652
MmeI	TCCRAC	1 cut(s)	1051
Mox20I	TGGCCA	1 cut(s)	652
MroI	TCCGGA	1 cut(s)	1099
MscI	TGGCCA	1 cut(s)	652
MseI	TTAA	3 cut(s)	155, 312, 953
MslI	CAYNNNNRTG	2 cut(s)	962, 1191
Msp20I	TGGCCA	1 cut(s)	652
MspA1I	CMGCKG	1 cut(s)	124
MspCI	CTTAAG	1 cut(s)	154
MspI	CCGG	3 cut(s)	187, 1035, 1100
MspR9I	CCNGG	2 cut(s)	1036, 1116
MunI	CAATTG	1 cut(s)	1148
MvaI	CCWGG	1 cut(s)	1116
MvnI	CGCG	2 cut(s)	1178, 1221
MwoI	GCNNNNNNNGC	4 cut(s)	205, 214, 705, 773
NciI	CCSGG	1 cut(s)	1036
NcoI	CCATGG	1 cut(s)	556
NdeII	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
NlaIV	GGNNCC	3 cut(s)	676, 1075, 1098
NmuCI	GTSAC	1 cut(s)	495
NspI	RCATGY	5 cut(s)	72, 411, 433, 515, 967
PagI	TCATGA	1 cut(s)	402
PcsI	WCGNNNNNNNCGW	1 cut(s)	934
PfeI	GAWTC	4 cut(s)	29, 549, 916, 1045
PinAI	ACCGGT	1 cut(s)	186
PkrI	GCNGC	2 cut(s)	99, 778
PsiI	TTATAA	1 cut(s)	863
Psp6I	CCWGG	1 cut(s)	1114
PspGI	CCWGG	1 cut(s)	1114
PspN4I	GGNNCC	3 cut(s)	676, 1075, 1098
PspPI	GGNCC	3 cut(s)	58, 178, 189
PsuI	RGATCY	2 cut(s)	12, 484
PvuII	CAGCTG	1 cut(s)	124
RsaI	GTAC	3 cut(s)	134, 170, 1181
RsaNI	GTAC	3 cut(s)	133, 169, 1180
RseI	CAYNNNNRTG	2 cut(s)	962, 1191
Rsr2I	CGGWCCG	1 cut(s)	189
RsrII	CGGWCCG	1 cut(s)	189
SaqAI	TTAA	3 cut(s)	155, 312, 953
SatI	GCNGC	2 cut(s)	98, 777
Sau3AI	GATC	7 cut(s)	12, 267, 331, 436, 484, 1009, 1222
Sau96I	GGNCC	3 cut(s)	58, 178, 189
ScrFI	CCNGG	2 cut(s)	1036, 1116
SduI	GDGCHC	1 cut(s)	1060
SfaNI	GCATC	1 cut(s)	1101
SfcI	CTRYAG	2 cut(s)	344, 882
SinI	GGWCC	2 cut(s)	58, 189
SmiMI	CAYNNNNRTG	2 cut(s)	962, 1191
SmlI	CTYRAG	1 cut(s)	154
SmoI	CTYRAG	1 cut(s)	154
Sse9I	AATT	9 cut(s)	19, 309, 386, 398, 532, 771, 876, 1121, 1148
SsiI	CCGC	1 cut(s)	97
SspMI	CTAG	1 cut(s)	1226
StyD4I	CCNGG	2 cut(s)	1034, 1114
StyI	CCWWGG	2 cut(s)	556, 1077
TaaI	ACNGT	3 cut(s)	39, 886, 1193
TaqI	TCGA	1 cut(s)	1125
TasI	AATT	9 cut(s)	19, 309, 386, 398, 532, 771, 876, 1121, 1148
TatI	WGTACW	1 cut(s)	168
TauI	GCSGC	1 cut(s)	100
TfiI	GAWTC	4 cut(s)	29, 549, 916, 1045
Tru1I	TTAA	3 cut(s)	155, 312, 953
Tru9I	TTAA	3 cut(s)	155, 312, 953
TscAI	CASTG	3 cut(s)	13, 310, 706
TseFI	GTSAC	1 cut(s)	495
TseI	GCWGC	1 cut(s)	776
Tsp45I	GTSAC	1 cut(s)	495
TspDTI	ATGAA	6 cut(s)	326, 391, 408, 459, 608, 811
TspRI	CASTG	3 cut(s)	13, 310, 706
Vha464I	CTTAAG	1 cut(s)	154
VpaK11BI	GGWCC	2 cut(s)	58, 189
XapI	RAATTY	3 cut(s)	19, 398, 1121
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	5 cut(s)	72, 411, 433, 515, 967
XcmI	CCANNNNNNNNNTGG	1 cut(s)	645
XmiI	GTMKAC	1 cut(s)	810
XspI	CTAG	1 cut(s)	1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.