FvH4_1g17990

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
10459751 .. 10460779
1029 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17990.t1

Sequence Viewer

Length: 1029 bp
ATGCATATGGTGATCATAAACAAAGGTAACAACGATCACAGTACAAGAATACAAGTGGGAAAATACGAGTTGGGAAAGACTCTGGGAAAGGGCCATTTCGGCAAAGTTAAGTTTGCTACGAATATTGAGTCAGGCCAACGCTATGCCGTAAAGATTCTGGAGAGAAAGAGAATCATTGACATAGACACGGCCGATAGGATAACAACAGAGATTGAAACTTTGAAGCGTCTCAAACATCCAAACGTCGTCAGGTTATACGAGATTCTGGCAAGCAAAACGCATATTCATATGGTCTTAGAGTACGTTGAAGGTGGAGAATTGTTCGACAAAATACGTCATAATGGAAGAGTCACAGAAGCCGAAAGCAGGAAGATTTTCCAACAGTTGATTGATGGAGTAAGCTATTGTCACAGAAAAGGTGTTTTCCATAGGGATCTTAAGCTGCAGAACATTCTCCTAGACGAGGAAGGAAACATAAAGATCTGTGACTTTGGCCTCAGCGCTTTGCCGCAGCATTTACACAAAGATGGGTTACTACATACAACTTGTGGAACCCCTAACTATGTTGCTCCTGAGATTCTCAGAAGGCGAGGGTACAATGGAGCCACCGTCGATATATGGTCTTGCGGTGTGATCCTGTTTGCCATTCTTTCTGGATTCTATCCTTTTGAAGATGAAAATCTTGCAATTCTTTATCGCAAGATCTATAAGGGGAATTTCAACATACCCGATTGGTTTTCACCTGGTGCAGCAGCCTTAATAAGAAGGATACTTGATCCGAATCCTGTCACCAGAATAAACATTAGAGACATAAAGTCAGATGAATGGTTCATGCAGGACTACACTCCTGCAAAACCCGATGAAGAAGAAGAAGAAGAAGATATACATGTCGATGCTGAAGCATTGAAGATTCTAGATTTGCGTCGCTCGAGTTTTAAGGTCCCGGGTTTTCTTCGGTTTTTATTATGCTGTTTTGGGTTTTGTATTTCAGACAGTGAGTTTATTAGTGATCTAAAGAAAGAAGTATGA

Protein Analysis

343

Amino Acids

39.32

Weight (kDa)

6.9

Isoelectric Point (pI)

50.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 22 - 277 1.2e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 23 - 273 6.4e-40 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 64 - 179 3.6e-07 ABC1 atypical kinase-like domain
Haspin_kinase PF12330 92 - 170 8.9e-06 Haspin like kinase domain
Kinase-like PF14531 112 - 260 4.4e-06 Kinase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 509, 627
AclWI GGATC 3 cut(s) 441, 628, 770
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 1 cut(s) 715
AcuI CTGAAG 1 cut(s) 918
AdeI CACNNNGTG 1 cut(s) 746
AfaI GTAC 3 cut(s) 43, 302, 596
AfeI AGCGCT 1 cut(s) 502
AfiI CCNNNNNNNGG 2 cut(s) 366, 463
AflII CTTAAG 1 cut(s) 437
AflIII ACRYGT 1 cut(s) 886
AgsI TTSAA 6 cut(s) 215, 223, 308, 671, 721, 907
AhdI GACNNNNNGTC 1 cut(s) 814
AjnI CCWGG 1 cut(s) 742
AluBI AGCT 2 cut(s) 402, 442
AluI AGCT 2 cut(s) 402, 442
Alw26I GTCTC 2 cut(s) 233, 801
AlwI GGATC 3 cut(s) 441, 628, 770
Ama87I CYCGRG 2 cut(s) 928, 943
Aor51HI AGCGCT 1 cut(s) 502
AoxI GGCC 4 cut(s) 91, 133, 189, 493
ApeKI GCWGC 4 cut(s) 442, 511, 749, 752
ApoI RAATTY 1 cut(s) 715
ArsI GACNNNNNNTTYG 2 cut(s) 113, 145
Asp700I GAANNNNTTC 1 cut(s) 374
AspLEI GCGC 1 cut(s) 503
AspS9I GGNCC 2 cut(s) 91, 940
AsuC2I CCSGG 2 cut(s) 944, 945
AsuHPI GGTGA 3 cut(s) 22, 732, 781
AvaI CYCGRG 2 cut(s) 928, 943
AvaII GGWCC 1 cut(s) 940
BarI GAAGNNNNNNTAC 2 cut(s) 867, 899
BbvCI CCTCAGC 1 cut(s) 497
BbvI GCAGC 4 cut(s) 429, 523, 761, 764
BccI CCATC 2 cut(s) 386, 521
BceAI ACGGC 2 cut(s) 131, 204
BciT130I CCWGG 1 cut(s) 744
BciVI GTATCC 1 cut(s) 762
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 2 cut(s) 944, 945
BcoDI GTCTC 2 cut(s) 233, 801
BfaI CTAG 2 cut(s) 458, 914
BfmI CTRYAG 1 cut(s) 443
BfoI RGCGCY 1 cut(s) 504
BfrI CTTAAG 1 cut(s) 437
BfuI GTATCC 1 cut(s) 762
BglI GCCNNNNNGGC 1 cut(s) 99
BglII AGATCT 2 cut(s) 480, 702
BisI GCNGC 5 cut(s) 443, 509, 512, 750, 753
BlsI GCNGC 5 cut(s) 444, 510, 513, 751, 754
Bme1390I CCNGG 3 cut(s) 744, 944, 945
Bme18I GGWCC 1 cut(s) 940
BmeRI GACNNNNNGTC 1 cut(s) 814
BmeT110I CYCGRG 2 cut(s) 928, 943
BmgT120I GGNCC 2 cut(s) 91, 940
BmiI GGNNCC 3 cut(s) 553, 604, 942
BmrFI CCNGG 3 cut(s) 744, 944, 945
BmsI GCATC 1 cut(s) 883
BpmI CTGGAG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 497
BpuMI CCSGG 2 cut(s) 944, 945
BsaBI GATNNNNATC 2 cut(s) 678, 780
BsaJI CCNNGG 1 cut(s) 943
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 366, 463
Bse8I GATNNNNATC 2 cut(s) 678, 780
BseBI CCWGG 1 cut(s) 744
BseDI CCNNGG 1 cut(s) 943
BseGI GGATG 1 cut(s) 235
BseJI GATNNNNATC 2 cut(s) 678, 780
BseLI CCNNNNNNNGG 2 cut(s) 366, 463
BseMII CTCAG 3 cut(s) 511, 564, 595
BseX3I CGGCCG 1 cut(s) 189
BseXI GCAGC 4 cut(s) 429, 523, 761, 764
BsgI GTGCAG 1 cut(s) 768
Bsh1285I CGRYCG 1 cut(s) 192
BshFI GGCC 4 cut(s) 93, 135, 191, 495
BsiEI CGRYCG 1 cut(s) 192
BsiHKCI CYCGRG 2 cut(s) 928, 943
BsiSI CCGG 1 cut(s) 944
BslFI GGGAC 1 cut(s) 926
BslI CCNNNNNNNGG 2 cut(s) 366, 463
BsmAI GTCTC 2 cut(s) 233, 801
BsmBI CGTCTC 1 cut(s) 233
BsmFI GGGAC 1 cut(s) 926
BsnI GGCC 4 cut(s) 93, 135, 191, 495
BsoBI CYCGRG 2 cut(s) 928, 943
Bsp143I GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
BspACI CCGC 2 cut(s) 509, 627
BspANI GGCC 4 cut(s) 93, 135, 191, 495
BspCNI CTCAG 3 cut(s) 510, 565, 594
BspLI GGNNCC 3 cut(s) 553, 604, 942
BspMAI CTGCAG 1 cut(s) 447
BspPI GGATC 3 cut(s) 441, 628, 770
BspTI CTTAAG 1 cut(s) 437
BssECI CCNNGG 1 cut(s) 943
BssMI GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
Bst2UI CCWGG 1 cut(s) 744
Bst4CI ACNGT 4 cut(s) 41, 384, 610, 995
Bst6I CTCTTC 1 cut(s) 340
BstAFI CTTAAG 1 cut(s) 437
BstC8I GCNNGC 1 cut(s) 271
BstDEI CTNAG 4 cut(s) 295, 497, 573, 581
BstENI CCTNNNNNAGG 1 cut(s) 461
BstF5I GGATG 1 cut(s) 235
BstH2I RGCGCY 1 cut(s) 504
BstHHI GCGC 1 cut(s) 503
BstKTI GATC 8 cut(s) 15, 37, 436, 483, 636, 705, 778, 1012
BstMAI GTCTC 2 cut(s) 233, 801
BstMBI GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
BstMCI CGRYCG 1 cut(s) 192
BstMWI GCNNNNNNNGC 1 cut(s) 99
BstNI CCWGG 1 cut(s) 744
BstNSI RCATGY 1 cut(s) 890
BstSCI CCNGG 3 cut(s) 742, 942, 943
BstSFI CTRYAG 1 cut(s) 443
BstV1I GCAGC 4 cut(s) 429, 523, 761, 764
BstX2I RGATCY 3 cut(s) 433, 480, 702
BstYI RGATCY 3 cut(s) 433, 480, 702
BstZI CGGCCG 1 cut(s) 189
BsuI GTATCC 1 cut(s) 762
BsuRI GGCC 4 cut(s) 93, 135, 191, 495
BtsCI GGATG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 1000
Cac8I GCNNGC 1 cut(s) 271
CfoI GCGC 1 cut(s) 503
Cfr13I GGNCC 2 cut(s) 91, 940
Cfr9I CCCGGG 1 cut(s) 943
CseI GACGC 2 cut(s) 215, 911
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 3 cut(s) 42, 301, 595
CviAII CATG 2 cut(s) 832, 887
CviJI RGCY 9 cut(s) 93, 135, 191, 359, 402, 442, 495, 605, 755
CviKI_1 RGCY 9 cut(s) 93, 135, 191, 359, 402, 442, 495, 605, 755
CviQI GTAC 3 cut(s) 42, 301, 595
DdeI CTNAG 4 cut(s) 295, 497, 573, 581
DpnI GATC 8 cut(s) 14, 36, 435, 482, 635, 704, 777, 1011
DpnII GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
DraIII CACNNNGTG 1 cut(s) 746
DriI GACNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 1 cut(s) 189
EagI CGGCCG 1 cut(s) 189
Eam1104I CTCTTC 1 cut(s) 340
Eam1105I GACNNNNNGTC 1 cut(s) 814
EarI CTCTTC 1 cut(s) 340
EclXI CGGCCG 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 940
Eco47III AGCGCT 1 cut(s) 502
Eco52I CGGCCG 1 cut(s) 189
Eco57I CTGAAG 1 cut(s) 918
Eco88I CYCGRG 2 cut(s) 928, 943
EcoNI CCTNNNNNAGG 1 cut(s) 461
EcoO109I RGGNCCY 1 cut(s) 940
EcoRII CCWGG 1 cut(s) 742
EcoT22I ATGCAT 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 233
FaeI CATG 2 cut(s) 835, 890
FaqI GGGAC 1 cut(s) 926
FatI CATG 2 cut(s) 831, 886
FauNDI CATATG 2 cut(s) 6, 288
FbaI TGATCA 1 cut(s) 12
Fnu4HI GCNGC 5 cut(s) 443, 509, 512, 750, 753
FokI GGATG 1 cut(s) 222
Fsp4HI GCNGC 5 cut(s) 443, 509, 512, 750, 753
FspBI CTAG 2 cut(s) 458, 914
GlaI GCGC 1 cut(s) 502
GluI GCNGC 5 cut(s) 443, 509, 512, 750, 753
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 1 cut(s) 504
HaeIII GGCC 4 cut(s) 93, 135, 191, 495
HapII CCGG 1 cut(s) 944
HgaI GACGC 2 cut(s) 215, 911
HhaI GCGC 1 cut(s) 503
Hin1II CATG 2 cut(s) 835, 890
Hin6I GCGC 1 cut(s) 501
HinP1I GCGC 1 cut(s) 501
HpaII CCGG 1 cut(s) 944
HphI GGTGA 3 cut(s) 22, 732, 781
Hpy188I TCNGA 4 cut(s) 584, 780, 820, 991
Hpy188III TCNNGA 4 cut(s) 158, 572, 654, 914
Hpy99I CGWCG 3 cut(s) 248, 614, 927
HpyAV CCTTC 4 cut(s) 302, 461, 579, 759
HpyCH4III ACNGT 4 cut(s) 41, 384, 610, 995
HpyCH4IV ACGT 3 cut(s) 243, 303, 334
HpyCH4V TGCA 6 cut(s) 4, 445, 686, 749, 835, 851
HpyF10VI GCNNNNNNNGC 1 cut(s) 99
HpyF3I CTNAG 4 cut(s) 295, 497, 573, 581
HpySE526I ACGT 3 cut(s) 243, 303, 334
Hsp92II CATG 2 cut(s) 835, 890
HspAI GCGC 1 cut(s) 501
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
LmnI GCTCC 2 cut(s) 574, 602
Lsp1109I GCAGC 4 cut(s) 429, 523, 761, 764
LweI GCATC 1 cut(s) 883
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 2 cut(s) 458, 914
MaeII ACGT 3 cut(s) 243, 303, 334
MaeIII GTNAC 6 cut(s) 26, 349, 407, 485, 531, 787
MalI GATC 8 cut(s) 14, 36, 435, 482, 635, 704, 777, 1011
MboI GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
MflI RGATCY 3 cut(s) 433, 480, 702
MluCI AATT 3 cut(s) 317, 687, 715
MlyI GAGTC 3 cut(s) 73, 137, 357
MmeI TCCRAC 1 cut(s) 403
MnlI CCTC 3 cut(s) 457, 506, 584
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 374
MseI TTAA 4 cut(s) 108, 438, 758, 936
MslI CAYNNNNRTG 2 cut(s) 525, 891
MspCI CTTAAG 1 cut(s) 437
MspI CCGG 1 cut(s) 944
MspR9I CCNGG 3 cut(s) 744, 944, 945
MvaI CCWGG 1 cut(s) 744
MwoI GCNNNNNNNGC 1 cut(s) 99
NciI CCSGG 2 cut(s) 944, 945
NdeI CATATG 2 cut(s) 6, 288
NdeII GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
NlaIII CATG 2 cut(s) 835, 890
NlaIV GGNNCC 3 cut(s) 553, 604, 942
NmuCI GTSAC 4 cut(s) 349, 407, 485, 787
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 890
PaeR7I CTCGAG 1 cut(s) 928
PciI ACATGT 1 cut(s) 886
PdmI GAANNNNTTC 1 cut(s) 374
PfeI GAWTC 7 cut(s) 154, 171, 262, 577, 657, 781, 910
PkrI GCNGC 5 cut(s) 444, 510, 513, 751, 754
PleI GAGTC 3 cut(s) 73, 136, 356
PpsI GAGTC 3 cut(s) 73, 136, 356
PpuMI RGGWCCY 1 cut(s) 940
PscI ACATGT 1 cut(s) 886
Psp5II RGGWCCY 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 742
PspGI CCWGG 1 cut(s) 742
PspN4I GGNNCC 3 cut(s) 553, 604, 942
PspPI GGNCC 2 cut(s) 91, 940
PspPPI RGGWCCY 1 cut(s) 940
PspXI VCTCGAGB 1 cut(s) 928
PstI CTGCAG 1 cut(s) 447
PsuI RGATCY 3 cut(s) 433, 480, 702
RsaI GTAC 3 cut(s) 43, 302, 596
RsaNI GTAC 3 cut(s) 42, 301, 595
RseI CAYNNNNRTG 2 cut(s) 525, 891
SaqAI TTAA 4 cut(s) 108, 438, 758, 936
SatI GCNGC 5 cut(s) 443, 509, 512, 750, 753
Sau3AI GATC 8 cut(s) 12, 34, 433, 480, 633, 702, 775, 1009
Sau96I GGNCC 2 cut(s) 91, 940
SchI GAGTC 3 cut(s) 73, 137, 357
ScrFI CCNGG 3 cut(s) 744, 944, 945
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 1 cut(s) 883
SfcI CTRYAG 1 cut(s) 443
Sfr274I CTCGAG 1 cut(s) 928
SinI GGWCC 1 cut(s) 940
SlaI CTCGAG 1 cut(s) 928
SmaI CCCGGG 1 cut(s) 945
SmiMI CAYNNNNRTG 2 cut(s) 525, 891
SmlI CTYRAG 2 cut(s) 437, 928
SmoI CTYRAG 2 cut(s) 437, 928
Sse9I AATT 3 cut(s) 317, 687, 715
SsiI CCGC 2 cut(s) 509, 627
SspI AATATT 1 cut(s) 124
SspMI CTAG 2 cut(s) 458, 914
StyD4I CCNGG 3 cut(s) 742, 942, 943
TaaI ACNGT 4 cut(s) 41, 384, 610, 995
TaiI ACGT 3 cut(s) 246, 306, 337
TaqI TCGA 4 cut(s) 324, 612, 891, 929
TasI AATT 3 cut(s) 317, 687, 715
TatI WGTACW 1 cut(s) 41
TauI GCSGC 1 cut(s) 511
TfiI GAWTC 7 cut(s) 154, 171, 262, 577, 657, 781, 910
Tru1I TTAA 4 cut(s) 108, 438, 758, 936
Tru9I TTAA 4 cut(s) 108, 438, 758, 936
TscAI CASTG 1 cut(s) 1000
TseFI GTSAC 4 cut(s) 349, 407, 485, 787
TseI GCWGC 4 cut(s) 442, 511, 749, 752
Tsp45I GTSAC 4 cut(s) 349, 407, 485, 787
TspDTI ATGAA 5 cut(s) 275, 690, 820, 837, 876
TspMI CCCGGG 1 cut(s) 943
TspRI CASTG 1 cut(s) 1000
Vha464I CTTAAG 1 cut(s) 437
VpaK11BI GGWCC 1 cut(s) 940
XagI CCTNNNNNAGG 1 cut(s) 461
XapI RAATTY 1 cut(s) 715
XbaI TCTAGA 1 cut(s) 913
XceI RCATGY 1 cut(s) 890
XhoI CTCGAG 1 cut(s) 928
XmaI CCCGGG 1 cut(s) 943
XmnI GAANNNNTTC 1 cut(s) 374
XspI CTAG 2 cut(s) 458, 914
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.