Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003218

Physical Location & Seq

Genomic Coordinates Forward (+)

8458368 .. 8464307

Gene Structure 5940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G105000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGTGATCGTAAGAAAAGGTGCAGAGGAGGAGGTGGACAAGAAGAAGAACGCGACTAATTGCAGTAACAAGGGAATGCGACTCGGAAAATACGAGCTTGGAAGGACTCTTGGCGAGGGCAATTTCGGCAAAGTTAAATTTGCTAAGAACGTCGACTCTGGACAACCCTTTGCTGTTAAGATCCTCGAGAAAACCAGAATCATTGATCTCAAGATCACAGACCAGATAAAGAGGGAGATTGGCACTTTGAAGCTCCTGAAACATCCCAACGTTGTCAGATTACACGAGGTTGTGGCAAGCAAAACCAAGATTTACATGGTCCTAGAATATGTTACTGGAGGAGAATTGTTTGACAAAATTGCACACAAGGGAAAACTTGCAGAAGCCGAAGGCAGGAAGCTCTTCCAACAGTTGATTGATGGTGTGAGCTACTGCCACAACAAAGGCGTTTTCCATCGGGACCTGAAGTTGGAAAATGTTCTTGTTGATGCCAAGGGGAACATAAAAATATCAGACTTTGGCCTCAGTGCTTTGCCCCAGCATTTTAGGGAAGATGGGTTGCTTCATACAACCTGTGGAAGCCCCAACTATGTTGCTCCTGAGATTCTTGCTAATAAAGGGTATGATGGTGCCACCTCTGATATATGGTCATGTGGTGTCATCTTATATGTCATTCTTACAGGATTTCTCCCTTTCGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATCTTGAAGGGGGAAGTTCAGATACCCACATGGCTATCACCTGGTGCAAAGAACTTGATAAAAAAGATTCTTGATCCCAACCCTGTTTCCAGAATAACAATGACAGGCATCAAGTCAGATGAATGGTTCAAGCAGGATTACTCTCCTGCGAATCCTGATGATGAAGAAGAAGATATAAACGTTGATGATGAAGCTTTCTCAATAAATGAAGTGCCATCTGAGGGGGAGAGGAGTCCAGACGCCCGGCACTCGCACACCCATATAAATGCCTTTCAGTTGATTGGAATGTCCTCGTGTCTAGACCTCTCCGGCTTCTTTGAGAAAGAGGATGTGTCTGAGAGGAAGATCAGATTTACATCCAACCACTCTGAAAAAGATTTGCTTGAAAAGATTGAAGAAATTGTACTAGAGATGGGATATTGTGTCCAGAAGAAAAATGGAAGGTTAAAAGTGATGCAAGAGCACAAAGGGGAGAGAAGTATGGGTAGTCTATCAGTTGCAGCAGAGGTGTTTGAGATAAGCCCATCTTTATTTGTTGTTGAAATAAGAAAGTCATATGGTGATGCTTCTGCATATAGAAAGTTGTGTGAAAAGCTATCACATGATTTAGGTGTTCCCGCAAGCCAAGGGTTGTTGACTAGCCAAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

KA1 NAF Pkinase

Protein Analysis

460

Amino Acids

51.3

Weight (kDa)

6.53

Isoelectric Point (pI)

33.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48260 AT1G48260 AT1G48260 AT1G48260 AT1G48260 AT3G17510 AT3G17510
fragaria_vesca	FvH4_1g17990 FvH4_4g21530 FvH4_4g21530 FvH4_4g21530
malus_domestica	MD13G1139700.v1.1 MD16G1136100.v1.1
prunus_persica	Prupe.1G105000_v2.0.a1 Prupe.1G105000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0108461 RchiOBHm_Chr4g0427571
rosa_laevigata	RLG00000007224 RLG00000017671
rosa_multiflora	Rmu_co8240981.1_g000001 Rmu_sc0002372.1_g000045 Rmu_sc0009208.1_g000029 Rmu_sc0009627.1_g000006
rosa_roxburghii	Rroxscaffold_2G00135110 Rroxscaffold_5G00369230
rosa_rugosa	Rorug02G0153600 Rorug04G0218700 Rorug04G0218800
rosa_samantha	Rh2BG215200 Rh2CG206400 Rh2DG209500 Rh4AG275200 Rh4BG281100 Rh4CG296300 Rh4DG278400
rosa_wichuraiana	Rw2G016170 Rw4G023860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	629
AccI	GTMKAC	1 cut(s)	153
AccII	CGCG	1 cut(s)	53
AciI	CCGC	1 cut(s)	1347
AclI	AACGTT	2 cut(s)	270, 909
AclWI	GGATC	2 cut(s)	175, 797
AcsI	RAATTY	1 cut(s)	137
AcuI	CTGAAG	1 cut(s)	485
AcyI	GRCGYC	1 cut(s)	969
AdeI	CACNNNGTG	1 cut(s)	773
AfaI	GTAC	1 cut(s)	1134
AfiI	CCNNNNNNNGG	3 cut(s)	393, 469, 950
AgsI	TTSAA	6 cut(s)	250, 736, 859, 1115, 1124, 1271
AjnI	CCWGG	1 cut(s)	769
AluBI	AGCT	6 cut(s)	97, 253, 400, 429, 923, 1324
AluI	AGCT	6 cut(s)	97, 253, 400, 429, 923, 1324
Alw21I	GWGCWC	1 cut(s)	1194
AlwI	GGATC	2 cut(s)	175, 797
Ama87I	CYCGRG	1 cut(s)	185
AoxI	GGCC	1 cut(s)	520
ApeKI	GCWGC	1 cut(s)	1229
ApoI	RAATTY	1 cut(s)	137
Asp700I	GAANNNNTTC	2 cut(s)	401, 477
AspS9I	GGNCC	2 cut(s)	319, 460
AsuC2I	CCSGG	1 cut(s)	973
AsuHPI	GGTGA	3 cut(s)	16, 759, 1301
AvaI	CYCGRG	1 cut(s)	185
AvaII	GGWCC	2 cut(s)	319, 460
BanI	GGYRCC	1 cut(s)	629
BarI	GAAGNNNNNNTAC	4 cut(s)	735, 767, 1116, 1148
BauI	CACGAG	2 cut(s)	284, 1021
Bbv12I	GWGCWC	1 cut(s)	1194
BbvI	GCAGC	1 cut(s)	1241
BccI	CCATC	7 cut(s)	413, 462, 548, 620, 952, 1135, 1261
BciT130I	CCWGG	1 cut(s)	771
BcnI	CCSGG	1 cut(s)	973
BfaI	CTAG	4 cut(s)	323, 1028, 1136, 1368
BglII	AGATCT	1 cut(s)	729
BisI	GCNGC	1 cut(s)	1230
BlsI	GCNGC	1 cut(s)	1231
Bme1390I	CCNGG	2 cut(s)	771, 973
Bme18I	GGWCC	2 cut(s)	319, 460
BmeT110I	CYCGRG	1 cut(s)	185
BmgT120I	GGNCC	2 cut(s)	319, 460
BmiI	GGNNCC	2 cut(s)	461, 631
BmrFI	CCNGG	2 cut(s)	771, 973
BmsI	GCATC	4 cut(s)	478, 846, 1173, 1282
BpmI	CTGGAG	1 cut(s)	357
BpuEI	CTTGAG	1 cut(s)	194
BpuMI	CCSGG	1 cut(s)	973
BsaBI	GATNNNNATC	2 cut(s)	705, 1084
BsaHI	GRCGYC	1 cut(s)	969
BsaJI	CCNNGG	2 cut(s)	492, 1354
Bsc4I	CCNNNNNNNGG	3 cut(s)	393, 469, 950
Bse1I	ACTGG	1 cut(s)	340
Bse8I	GATNNNNATC	2 cut(s)	705, 1084
BseBI	CCWGG	1 cut(s)	771
BseDI	CCNNGG	2 cut(s)	492, 1354
BseGI	GGATG	3 cut(s)	262, 1063, 1085
BseJI	GATNNNNATC	2 cut(s)	705, 1084
BseLI	CCNNNNNNNGG	3 cut(s)	393, 469, 950
BseMII	CTCAG	4 cut(s)	538, 591, 939, 1056
BseNI	ACTGG	1 cut(s)	340
BseRI	GAGGAG	4 cut(s)	41, 44, 354, 973
BseXI	GCAGC	1 cut(s)	1241
BseYI	CCCAGC	1 cut(s)	537
BsgI	GTGCAG	1 cut(s)	42
Bsh1236I	CGCG	1 cut(s)	53
BshFI	GGCC	1 cut(s)	522
BshNI	GGYRCC	1 cut(s)	629
BsiHKAI	GWGCWC	1 cut(s)	1194
BsiHKCI	CYCGRG	1 cut(s)	185
BsiSI	CCGG	2 cut(s)	973, 1038
BslFI	GGGAC	1 cut(s)	473
BslI	CCNNNNNNNGG	3 cut(s)	393, 469, 950
BsmFI	GGGAC	1 cut(s)	473
BsmI	GAATGC	1 cut(s)	81
BsnI	GGCC	1 cut(s)	522
BsoBI	CYCGRG	1 cut(s)	185
Bsp1286I	GDGCHC	1 cut(s)	1194
Bsp143I	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
BspACI	CCGC	1 cut(s)	1347
BspANI	GGCC	1 cut(s)	522
BspCNI	CTCAG	4 cut(s)	537, 592, 940, 1057
BspFNI	CGCG	1 cut(s)	53
BspLI	GGNNCC	2 cut(s)	461, 631
BspPI	GGATC	2 cut(s)	175, 797
BspQI	GCTCTTC	1 cut(s)	407
BspT107I	GGYRCC	1 cut(s)	629
BsrI	ACTGG	1 cut(s)	340
BssECI	CCNNGG	2 cut(s)	492, 1354
BssMI	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
BssNI	GRCGYC	1 cut(s)	969
BssSI	CACGAG	2 cut(s)	284, 1021
BssT1I	CCWWGG	2 cut(s)	492, 1354
Bst2BI	CACGAG	2 cut(s)	284, 1021
Bst2UI	CCWGG	1 cut(s)	771
Bst4CI	ACNGT	1 cut(s)	411
Bst6I	CTCTTC	1 cut(s)	407
BstACI	GRCGYC	1 cut(s)	969
BstC8I	GCNNGC	2 cut(s)	298, 1351
BstDEI	CTNAG	5 cut(s)	144, 524, 600, 948, 1065
BstF5I	GGATG	3 cut(s)	262, 1063, 1085
BstFNI	CGCG	1 cut(s)	53
BstKTI	GATC	7 cut(s)	9, 183, 208, 216, 732, 805, 1077
BstMBI	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
BstMWI	GCNNNNNNNGC	1 cut(s)	126
BstNI	CCWGG	1 cut(s)	771
BstSCI	CCNGG	2 cut(s)	769, 971
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	1 cut(s)	1241
BstX2I	RGATCY	2 cut(s)	180, 729
BstYI	RGATCY	2 cut(s)	180, 729
BsuRI	GGCC	1 cut(s)	522
BtsCI	GGATG	3 cut(s)	262, 1063, 1085
BtsIMutI	CAGTG	1 cut(s)	532
Cac8I	GCNNGC	2 cut(s)	298, 1351
Cfr13I	GGNCC	2 cut(s)	319, 460
CseI	GACGC	1 cut(s)	977
CsiI	ACCWGGT	1 cut(s)	769
Csp6I	GTAC	1 cut(s)	1133
CviAII	CATG	4 cut(s)	316, 651, 759, 1331
CviQI	GTAC	1 cut(s)	1133
DdeI	CTNAG	5 cut(s)	144, 524, 600, 948, 1065
DpnI	GATC	7 cut(s)	8, 182, 207, 215, 731, 804, 1076
DpnII	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
DraIII	CACNNNGTG	1 cut(s)	773
Eam1104I	CTCTTC	1 cut(s)	407
EarI	CTCTTC	1 cut(s)	407
Eco130I	CCWWGG	2 cut(s)	492, 1354
Eco47I	GGWCC	2 cut(s)	319, 460
Eco57I	CTGAAG	1 cut(s)	485
Eco88I	CYCGRG	1 cut(s)	185
EcoO109I	RGGNCCY	1 cut(s)	460
EcoRII	CCWGG	1 cut(s)	769
EcoT14I	CCWWGG	2 cut(s)	492, 1354
ErhI	CCWWGG	2 cut(s)	492, 1354
FaeI	CATG	4 cut(s)	319, 654, 762, 1334
FalI	AAGNNNNNCTT	4 cut(s)	1095, 1127, 1240, 1272
FaqI	GGGAC	1 cut(s)	473
FatI	CATG	4 cut(s)	315, 650, 758, 1330
FauI	CCCGC	1 cut(s)	1354
FauNDI	CATATG	1 cut(s)	1285
FblI	GTMKAC	1 cut(s)	153
Fnu4HI	GCNGC	1 cut(s)	1230
FokI	GGATG	3 cut(s)	249, 1070, 1072
Fsp4HI	GCNGC	1 cut(s)	1230
FspBI	CTAG	4 cut(s)	323, 1028, 1136, 1368
GluI	GCNGC	1 cut(s)	1230
GsaI	CCCAGC	1 cut(s)	541
GsuI	CTGGAG	1 cut(s)	357
HaeIII	GGCC	1 cut(s)	522
HapII	CCGG	2 cut(s)	973, 1038
HgaI	GACGC	1 cut(s)	977
Hin1I	GRCGYC	1 cut(s)	969
Hin1II	CATG	4 cut(s)	319, 654, 762, 1334
HincII	GTYRAC	2 cut(s)	154, 1365
HindII	GTYRAC	2 cut(s)	154, 1365
HindIII	AAGCTT	1 cut(s)	921
HinfI	GANTC	8 cut(s)	81, 106, 155, 198, 604, 796, 880, 961
HpaII	CCGG	2 cut(s)	973, 1038
HphI	GGTGA	3 cut(s)	16, 759, 1301
Hpy166II	GTNNAC	3 cut(s)	37, 154, 1365
Hpy8I	GTNNAC	3 cut(s)	37, 154, 1365
Hpy99I	CGWCG	1 cut(s)	155
HpyAV	CCTTC	4 cut(s)	96, 383, 730, 1164
HpyCH4III	ACNGT	1 cut(s)	411
HpyCH4IV	ACGT	3 cut(s)	150, 270, 909
HpyCH4V	TGCA	9 cut(s)	23, 63, 362, 380, 713, 776, 1186, 1229, 1301
HpyF10VI	GCNNNNNNNGC	1 cut(s)	126
HpyF3I	CTNAG	5 cut(s)	144, 524, 600, 948, 1065
HpySE526I	ACGT	3 cut(s)	150, 270, 909
Hsp92I	GRCGYC	1 cut(s)	969
Hsp92II	CATG	4 cut(s)	319, 654, 762, 1334
Kzo9I	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
LguI	GCTCTTC	1 cut(s)	407
LmnI	GCTCC	2 cut(s)	258, 601
Lsp1109I	GCAGC	1 cut(s)	1241
LweI	GCATC	4 cut(s)	478, 846, 1173, 1282
MabI	ACCWGGT	1 cut(s)	769
MaeI	CTAG	4 cut(s)	323, 1028, 1136, 1368
MaeII	ACGT	3 cut(s)	150, 270, 909
MaeIII	GTNAC	2 cut(s)	65, 331
MalI	GATC	7 cut(s)	8, 182, 207, 215, 731, 804, 1076
MboI	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
MflI	RGATCY	2 cut(s)	180, 729
MhlI	GDGCHC	1 cut(s)	1194
MluCI	AATT	6 cut(s)	58, 121, 137, 344, 357, 1128
MlyI	GAGTC	4 cut(s)	75, 100, 149, 970
MmeI	TCCRAC	3 cut(s)	430, 450, 1113
MroXI	GAANNNNTTC	2 cut(s)	401, 477
MseI	TTAA	3 cut(s)	135, 177, 1175
MslI	CAYNNNNRTG	1 cut(s)	993
MspI	CCGG	2 cut(s)	973, 1038
MspR9I	CCNGG	2 cut(s)	771, 973
Mva1269I	GAATGC	1 cut(s)	81
MvaI	CCWGG	1 cut(s)	771
MvnI	CGCG	1 cut(s)	53
MwoI	GCNNNNNNNGC	1 cut(s)	126
NciI	CCSGG	1 cut(s)	973
NdeI	CATATG	1 cut(s)	1285
NdeII	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
NlaIII	CATG	4 cut(s)	319, 654, 762, 1334
NlaIV	GGNNCC	2 cut(s)	461, 631
PaeR7I	CTCGAG	1 cut(s)	185
PciSI	GCTCTTC	1 cut(s)	407
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	81
PdmI	GAANNNNTTC	2 cut(s)	401, 477
PfeI	GAWTC	4 cut(s)	198, 604, 796, 880
PkrI	GCNGC	1 cut(s)	1231
PleI	GAGTC	4 cut(s)	75, 100, 149, 969
PpsI	GAGTC	4 cut(s)	75, 100, 149, 969
PpuMI	RGGWCCY	1 cut(s)	460
Psp1406I	AACGTT	2 cut(s)	270, 909
Psp5II	RGGWCCY	1 cut(s)	460
Psp6I	CCWGG	1 cut(s)	769
PspFI	CCCAGC	1 cut(s)	537
PspGI	CCWGG	1 cut(s)	769
PspN4I	GGNNCC	2 cut(s)	461, 631
PspPI	GGNCC	2 cut(s)	319, 460
PspPPI	RGGWCCY	1 cut(s)	460
PsuI	RGATCY	2 cut(s)	180, 729
RsaI	GTAC	1 cut(s)	1134
RsaNI	GTAC	1 cut(s)	1133
RseI	CAYNNNNRTG	1 cut(s)	993
SalI	GTCGAC	1 cut(s)	152
SapI	GCTCTTC	1 cut(s)	407
SaqAI	TTAA	3 cut(s)	135, 177, 1175
SatI	GCNGC	1 cut(s)	1230
Sau3AI	GATC	7 cut(s)	6, 180, 205, 213, 729, 802, 1074
Sau96I	GGNCC	2 cut(s)	319, 460
SchI	GAGTC	4 cut(s)	75, 100, 149, 970
ScrFI	CCNGG	2 cut(s)	771, 973
SduI	GDGCHC	1 cut(s)	1194
SexAI	ACCWGGT	1 cut(s)	769
SfaNI	GCATC	4 cut(s)	478, 846, 1173, 1282
Sfr274I	CTCGAG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	319, 460
SlaI	CTCGAG	1 cut(s)	185
SmiMI	CAYNNNNRTG	1 cut(s)	993
SmlI	CTYRAG	2 cut(s)	185, 209
SmoI	CTYRAG	2 cut(s)	185, 209
Sse9I	AATT	6 cut(s)	58, 121, 137, 344, 357, 1128
SsiI	CCGC	1 cut(s)	1347
SspMI	CTAG	4 cut(s)	323, 1028, 1136, 1368
StyD4I	CCNGG	2 cut(s)	769, 971
StyI	CCWWGG	2 cut(s)	492, 1354
TaaI	ACNGT	1 cut(s)	411
TaiI	ACGT	3 cut(s)	153, 273, 912
TaqI	TCGA	3 cut(s)	153, 186, 696
TasI	AATT	6 cut(s)	58, 121, 137, 344, 357, 1128
TatI	WGTACW	1 cut(s)	1132
TfiI	GAWTC	4 cut(s)	198, 604, 796, 880
Tru1I	TTAA	3 cut(s)	135, 177, 1175
Tru9I	TTAA	3 cut(s)	135, 177, 1175
TscAI	CASTG	1 cut(s)	532
TseI	GCWGC	1 cut(s)	1229
TspDTI	ATGAA	5 cut(s)	554, 864, 906, 933, 951
TspRI	CASTG	1 cut(s)	532
VpaK11BI	GGWCC	2 cut(s)	319, 460
XapI	RAATTY	1 cut(s)	137
XbaI	TCTAGA	1 cut(s)	1027
XcmI	CCANNNNNNNNNTGG	2 cut(s)	313, 1163
XhoI	CTCGAG	1 cut(s)	185
XmiI	GTMKAC	1 cut(s)	153
XmnI	GAANNNNTTC	2 cut(s)	401, 477
XspI	CTAG	4 cut(s)	323, 1028, 1136, 1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.