Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003218

Physical Location & Seq

Genomic Coordinates Forward (+)

13594726 .. 13597229

Gene Structure 2504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0153600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGGCCTTAAACGGGCCTCCAGATACCCATCTTCCTCTTTTCGATCAACACCCGGTTTTTTTAGACGTTTGGAAGCCATGAGAACAAGAAAGGTTTTGGGGGTTTCTCTGTCTCTCATTCTCATCAACTTGGCTGCTATAATGGAGCGAGCCGATGAGAATCTCCTCCCATCTGTGTACAAAGAAGTCAGTGAAGCTTTCAATGCCGGGCCATCTGACCTCGGATATCTCACATTCATCAGGAACTTTGTGCAGGGAATGGCATCTCCCCTTGCAGGTGTACTAGTCCTCTTATACGACCGCCCCACCGTGCTTGCAATGGGCACTTTCTGCTGGGCAATATCAACTGCTGCAGTGGGTGCAAGCCACCATTTTGCTCAAGCTGCACTCTGGAGAGCAGTGAATGGGTTCGGGCTGGCAATTGTCATACCAGCCCTTCAGTCTTTCATTGCTGATAGCTATAATGATGGCGTGAGAGGGGCTGGGTTTGGGATGGTAAGTCTTGTTGGTTCTTTGGGTGGCATTGGAGGCGGTGTTGTGGCCACGCTTATGGCTGGTAACATGTACTGGAGCATACCTGGATGGCGTATTGCCTTCATTCTAATGGCAGCACTGAGTTCACTAATTGGGTTCCTTGTGTTCATGTTTGTGGTTGACCCTAGAAAAATAGTTCCTATCACTCATGGTGCTGACCAGAGTTTTGAGAGGGATGATTTGATAATAAAGGGCAGTACTACTTCAACTGCAGCATCAGTTTGGATCGAGTCTTGGACAGCCATGAAGTCGGTTGTTAAAGTGCCAACATTTCAAATAATTGTCTTGCAGGGCGTTGTTGGGTCGCTACCATGGACTGCCATGGTGTTCTTCACTATGTGGTTCGAACTTATAGGTTTTGATCACAACAGTACAGCAGCCCTGCTCAGTCTCTTTGCTGTTGGATGTGCTACGGGGTCTCTTCTTGGTGGAATAATGGCAGATCGAATGTCACGAATCTACCCCCACACTGGCCGCATCATGTGTGCGCAGTTCAGCGCCTTCATGGGAATTCCATTTTCTTGGTTTTTACTCAAAGTTATCCCGCAATCAGTAGACAGCTATTACACATTTGCCGTCACTCTCACCTTGATGGGTTTAACTATCAGCTGGAATGCTACTGCTGCAAATGGTCCTATGTTTGCTGAGGTTGTTCCTACCAAACACCGAACTATGATTTATGCATTTGATCGGGCTTTCGAAGGATCCTTCTCTTCTTTTGCTGCTCCTTTGGTTGGAATTCTTTCAGAGAAGATGTTTGGCTATGATGCAAAATCTGTGGATCCGATTAAAGGGTCTACTAGGGAGGCCTTTGCATTATCTCAAGGGCTTATTTCGATGATGGCAGTTCCATTTGGTTTGTGTTGCTTGTTTTATACGCCTTTGTATGTGATTTTCAGAAAGGACCGCGAGAGTGCTAGAATTGCCAGTGCAAAAGAGGAAGAGATGAGCCTAACGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

KA1 NAF Pkinase

Protein Analysis

498

Amino Acids

54.06

Weight (kDa)

9.11

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	44 - 380	7.7e-29	Major Facilitator Superfamily
MFS_1	PF07690	297 - 490	9.1e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48260 AT1G48260 AT1G48260 AT1G48260 AT1G48260 AT3G17510 AT3G17510
fragaria_vesca	FvH4_1g17990 FvH4_4g21530 FvH4_4g21530 FvH4_4g21530
malus_domestica	MD13G1139700.v1.1 MD16G1136100.v1.1
prunus_persica	Prupe.1G105000_v2.0.a1 Prupe.1G105000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0108461 RchiOBHm_Chr4g0427571
rosa_laevigata	RLG00000007224 RLG00000017671
rosa_multiflora	Rmu_co8240981.1_g000001 Rmu_sc0002372.1_g000045 Rmu_sc0009208.1_g000029 Rmu_sc0009627.1_g000006
rosa_roxburghii	Rroxscaffold_2G00135110 Rroxscaffold_5G00369230
rosa_rugosa	Rorug02G0153600 Rorug04G0218700 Rorug04G0218800
rosa_samantha	Rh2BG215200 Rh2CG206400 Rh2DG209500 Rh4AG275200 Rh4BG281100 Rh4CG296300 Rh4DG278400
rosa_wichuraiana	Rw2G016170 Rw4G023860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	266
Acc16I	TGCGCA	1 cut(s)	1023
Acc36I	ACCTGC	1 cut(s)	266
AccI	GTMKAC	2 cut(s)	1089, 1331
AccII	CGCG	1 cut(s)	1443
AciI	CCGC	5 cut(s)	301, 531, 1009, 1079, 1441
AclWI	GGATC	5 cut(s)	767, 1233, 1246, 1310, 1323
AcoI	YGGCCR	2 cut(s)	540, 1006
AcsI	RAATTY	2 cut(s)	1044, 1272
AcuI	CTGAAG	1 cut(s)	422
AdeI	CACNNNGTG	1 cut(s)	873
AfaI	GTAC	5 cut(s)	179, 282, 566, 733, 907
AfiI	CCNNNNNNNGG	5 cut(s)	13, 275, 1004, 1268, 1325
AflIII	ACRYGT	1 cut(s)	561
AgsI	TTSAA	3 cut(s)	202, 741, 809
AhlI	ACTAGT	1 cut(s)	283
AjnI	CCWGG	1 cut(s)	577
AluBI	AGCT	5 cut(s)	197, 383, 459, 1095, 1143
AluI	AGCT	5 cut(s)	197, 383, 459, 1095, 1143
Alw26I	GTCTC	3 cut(s)	117, 929, 957
AlwI	GGATC	5 cut(s)	767, 1233, 1246, 1310, 1323
AoxI	GGCC	6 cut(s)	4, 15, 209, 540, 1006, 1341
ApeKI	GCWGC	8 cut(s)	134, 350, 383, 608, 746, 911, 1157, 1256
ApoI	RAATTY	2 cut(s)	1044, 1272
ArsI	GACNNNNNNTTYG	2 cut(s)	683, 715
Asp700I	GAANNNNTTC	2 cut(s)	407, 1276
AspLEI	GCGC	2 cut(s)	1024, 1034
AspS9I	GGNCC	5 cut(s)	4, 15, 209, 1166, 1438
AsuC2I	CCSGG	2 cut(s)	54, 208
AsuHPI	GGTGA	1 cut(s)	1111
AsuII	TTCGAA	2 cut(s)	879, 1233
AvaII	GGWCC	2 cut(s)	1166, 1438
BaeGI	GKGCMC	1 cut(s)	326
BalI	TGGCCA	1 cut(s)	542
BamHI	GGATCC	2 cut(s)	1238, 1315
BbvCI	CCTCAGC	1 cut(s)	1179
BbvI	GCAGC	8 cut(s)	121, 337, 370, 620, 758, 923, 1144, 1243
BccI	CCATC	8 cut(s)	37, 178, 220, 461, 487, 576, 1120, 1369
BceAI	ACGGC	1 cut(s)	1094
BciT130I	CCWGG	1 cut(s)	579
BclI	TGATCA	1 cut(s)	895
BcnI	CCSGG	2 cut(s)	54, 208
BcoDI	GTCTC	3 cut(s)	117, 929, 957
BcuI	ACTAGT	1 cut(s)	283
BfaI	CTAG	4 cut(s)	284, 660, 1335, 1452
BfmI	CTRYAG	2 cut(s)	351, 744
BfoI	RGCGCY	1 cut(s)	1035
BfuAI	ACCTGC	1 cut(s)	266
BisI	GCNGC	9 cut(s)	135, 351, 384, 609, 747, 912, 1009, 1158, 1257
BlsI	GCNGC	9 cut(s)	136, 352, 385, 610, 748, 913, 1010, 1159, 1258
BmcAI	AGTACT	1 cut(s)	733
Bme1390I	CCNGG	3 cut(s)	54, 208, 579
Bme18I	GGWCC	2 cut(s)	1166, 1438
BmgT120I	GGNCC	5 cut(s)	4, 15, 209, 1166, 1438
BmiI	GGNNCC	3 cut(s)	632, 1240, 1317
BmrFI	CCNGG	3 cut(s)	54, 208, 579
BmsI	GCATC	4 cut(s)	272, 758, 1020, 1291
BpmI	CTGGAG	3 cut(s)	4, 412, 589
Bpu10I	CCTNAGC	1 cut(s)	1179
Bpu14I	TTCGAA	2 cut(s)	879, 1233
BpuEI	CTTGAG	2 cut(s)	363, 1341
BpuMI	CCSGG	2 cut(s)	54, 208
BsaBI	GATNNNNATC	2 cut(s)	28, 159
BsaI	GGTCTC	1 cut(s)	957
BsaJI	CCNNGG	3 cut(s)	220, 845, 855
BsaXI	ACNNNNNCTCC	2 cut(s)	519, 549
Bsc4I	CCNNNNNNNGG	5 cut(s)	13, 275, 1004, 1268, 1325
Bse1I	ACTGG	3 cut(s)	572, 1009, 1461
Bse3DI	GCAATG	2 cut(s)	324, 447
Bse8I	GATNNNNATC	2 cut(s)	28, 159
BseBI	CCWGG	1 cut(s)	579
BseDI	CCNNGG	3 cut(s)	220, 845, 855
BseGI	GGATG	4 cut(s)	498, 587, 715, 944
BseJI	GATNNNNATC	2 cut(s)	28, 159
BseLI	CCNNNNNNNGG	5 cut(s)	13, 275, 1004, 1268, 1325
BseMI	GCAATG	2 cut(s)	324, 447
BseMII	CTCAG	3 cut(s)	605, 934, 1170
BseNI	ACTGG	3 cut(s)	572, 1009, 1461
BseRI	GAGGAG	1 cut(s)	155
BseSI	GKGCMC	1 cut(s)	326
BseXI	GCAGC	8 cut(s)	121, 337, 370, 620, 758, 923, 1144, 1243
BseYI	CCCAGC	2 cut(s)	333, 482
BsgI	GTGCAG	2 cut(s)	272, 369
Bsh1236I	CGCG	1 cut(s)	1443
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	6 cut(s)	6, 17, 211, 542, 1008, 1343
BsiEI	CGRYCG	1 cut(s)	301
BsiSI	CCGG	2 cut(s)	54, 207
BslI	CCNNNNNNNGG	5 cut(s)	13, 275, 1004, 1268, 1325
BsmAI	GTCTC	3 cut(s)	117, 929, 957
BsmI	GAATGC	1 cut(s)	1153
BsnI	GGCC	6 cut(s)	6, 17, 211, 542, 1008, 1343
Bso31I	GGTCTC	1 cut(s)	957
Bsp119I	TTCGAA	2 cut(s)	879, 1233
Bsp1286I	GDGCHC	1 cut(s)	326
Bsp1407I	TGTACA	1 cut(s)	177
Bsp143I	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
Bsp19I	CCATGG	2 cut(s)	845, 855
BspACI	CCGC	5 cut(s)	301, 531, 1009, 1079, 1441
BspANI	GGCC	6 cut(s)	6, 17, 211, 542, 1008, 1343
BspCNI	CTCAG	3 cut(s)	606, 933, 1171
BspFNI	CGCG	1 cut(s)	1443
BspLI	GGNNCC	3 cut(s)	632, 1240, 1317
BspMAI	CTGCAG	2 cut(s)	355, 748
BspMI	ACCTGC	1 cut(s)	266
BspPI	GGATC	5 cut(s)	767, 1233, 1246, 1310, 1323
BspT104I	TTCGAA	2 cut(s)	879, 1233
BspTNI	GGTCTC	1 cut(s)	957
BsrDI	GCAATG	2 cut(s)	324, 447
BsrGI	TGTACA	1 cut(s)	177
BsrI	ACTGG	3 cut(s)	572, 1009, 1461
BssECI	CCNNGG	3 cut(s)	220, 845, 855
BssMI	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
BssT1I	CCWWGG	2 cut(s)	845, 855
Bst2UI	CCWGG	1 cut(s)	579
Bst4CI	ACNGT	2 cut(s)	310, 905
Bst6I	CTCTTC	3 cut(s)	960, 1252, 1470
BstAPI	GCANNNNNTGC	2 cut(s)	330, 359
BstAUI	TGTACA	1 cut(s)	177
BstBI	TTCGAA	2 cut(s)	879, 1233
BstC8I	GCNNGC	4 cut(s)	150, 315, 364, 417
BstDEI	CTNAG	3 cut(s)	614, 920, 1179
BstDSI	CCRYGG	2 cut(s)	845, 855
BstF5I	GGATG	4 cut(s)	498, 587, 715, 944
BstFNI	CGCG	1 cut(s)	1443
BstH2I	RGCGCY	1 cut(s)	1035
BstHHI	GCGC	2 cut(s)	1024, 1034
BstKTI	GATC	7 cut(s)	47, 762, 898, 979, 1225, 1241, 1318
BstMAI	GTCTC	3 cut(s)	117, 929, 957
BstMBI	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
BstMCI	CGRYCG	1 cut(s)	301
BstMWI	GCNNNNNNNGC	7 cut(s)	203, 330, 359, 383, 528, 1157, 1457
BstNI	CCWGG	1 cut(s)	579
BstNSI	RCATGY	1 cut(s)	565
BstSCI	CCNGG	3 cut(s)	52, 206, 577
BstSFI	CTRYAG	2 cut(s)	351, 744
BstSLI	GKGCMC	1 cut(s)	326
BstUI	CGCG	1 cut(s)	1443
BstV1I	GCAGC	8 cut(s)	121, 337, 370, 620, 758, 923, 1144, 1243
BstX2I	RGATCY	2 cut(s)	1238, 1315
BstXI	CCANNNNNNTGG	2 cut(s)	550, 1056
BstYI	RGATCY	2 cut(s)	1238, 1315
BsuRI	GGCC	6 cut(s)	6, 17, 211, 542, 1008, 1343
BtgI	CCRYGG	2 cut(s)	845, 855
BtsCI	GGATG	4 cut(s)	498, 587, 715, 944
BtsI	GCAGTG	2 cut(s)	360, 405
BtsIMutI	CAGTG	6 cut(s)	196, 360, 405, 611, 1002, 1468
BveI	ACCTGC	1 cut(s)	266
Cac8I	GCNNGC	4 cut(s)	150, 315, 364, 417
CfoI	GCGC	2 cut(s)	1024, 1034
Cfr13I	GGNCC	5 cut(s)	4, 15, 209, 1166, 1438
Csp6I	GTAC	5 cut(s)	178, 281, 565, 732, 906
CspCI	CAANNNNNGTGG	4 cut(s)	295, 330, 1293, 1328
CviAII	CATG	9 cut(s)	79, 562, 643, 683, 778, 846, 856, 1015, 1039
CviQI	GTAC	5 cut(s)	178, 281, 565, 732, 906
DdeI	CTNAG	3 cut(s)	614, 920, 1179
DpnI	GATC	7 cut(s)	46, 761, 897, 978, 1224, 1240, 1317
DpnII	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
DraIII	CACNNNGTG	1 cut(s)	873
EaeI	YGGCCR	2 cut(s)	540, 1006
Eam1104I	CTCTTC	3 cut(s)	960, 1252, 1470
EarI	CTCTTC	3 cut(s)	960, 1252, 1470
Eco130I	CCWWGG	2 cut(s)	845, 855
Eco147I	AGGCCT	1 cut(s)	1343
Eco31I	GGTCTC	1 cut(s)	957
Eco32I	GATATC	1 cut(s)	227
Eco47I	GGWCC	2 cut(s)	1166, 1438
Eco57I	CTGAAG	1 cut(s)	422
EcoRI	GAATTC	2 cut(s)	1044, 1272
EcoRII	CCWGG	1 cut(s)	577
EcoRV	GATATC	1 cut(s)	227
EcoT14I	CCWWGG	2 cut(s)	845, 855
EcoT22I	ATGCAT	1 cut(s)	1219
ErhI	CCWWGG	2 cut(s)	845, 855
FaeI	CATG	9 cut(s)	82, 565, 646, 686, 781, 849, 859, 1018, 1042
FatI	CATG	9 cut(s)	78, 561, 642, 682, 777, 845, 855, 1014, 1038
FauI	CCCGC	1 cut(s)	1086
FbaI	TGATCA	1 cut(s)	895
FblI	GTMKAC	2 cut(s)	1089, 1331
Fnu4HI	GCNGC	9 cut(s)	135, 351, 384, 609, 747, 912, 1009, 1158, 1257
FokI	GGATG	4 cut(s)	505, 594, 722, 951
Fsp4HI	GCNGC	9 cut(s)	135, 351, 384, 609, 747, 912, 1009, 1158, 1257
FspBI	CTAG	4 cut(s)	284, 660, 1335, 1452
FspI	TGCGCA	1 cut(s)	1023
GlaI	GCGC	2 cut(s)	1023, 1033
GluI	GCNGC	9 cut(s)	135, 351, 384, 609, 747, 912, 1009, 1158, 1257
GsaI	CCCAGC	2 cut(s)	337, 486
GsuI	CTGGAG	3 cut(s)	4, 412, 589
HaeII	RGCGCY	1 cut(s)	1035
HaeIII	GGCC	6 cut(s)	6, 17, 211, 542, 1008, 1343
HapII	CCGG	2 cut(s)	54, 207
HhaI	GCGC	2 cut(s)	1024, 1034
Hin1II	CATG	9 cut(s)	82, 565, 646, 686, 781, 849, 859, 1018, 1042
Hin6I	GCGC	2 cut(s)	1022, 1032
HinP1I	GCGC	2 cut(s)	1022, 1032
HincII	GTYRAC	1 cut(s)	655
HindII	GTYRAC	1 cut(s)	655
HindIII	AAGCTT	1 cut(s)	195
HinfI	GANTC	3 cut(s)	160, 764, 990
HpaII	CCGG	2 cut(s)	54, 207
HphI	GGTGA	1 cut(s)	1111
Hpy166II	GTNNAC	6 cut(s)	178, 281, 620, 655, 1090, 1332
Hpy188I	TCNGA	5 cut(s)	217, 224, 1282, 1320, 1433
Hpy188III	TCNNGA	4 cut(s)	21, 241, 391, 987
Hpy8I	GTNNAC	6 cut(s)	178, 281, 620, 655, 1090, 1332
HpyAV	CCTTC	5 cut(s)	446, 604, 1045, 1229, 1252
HpyCH4III	ACNGT	2 cut(s)	310, 905
HpyCH4IV	ACGT	1 cut(s)	67
HpyF10VI	GCNNNNNNNGC	7 cut(s)	203, 330, 359, 383, 528, 1157, 1457
HpyF3I	CTNAG	3 cut(s)	614, 920, 1179
HpySE526I	ACGT	1 cut(s)	67
Hsp92II	CATG	9 cut(s)	82, 565, 646, 686, 781, 849, 859, 1018, 1042
HspAI	GCGC	2 cut(s)	1022, 1032
Ksp22I	TGATCA	1 cut(s)	895
Kzo9I	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
LmnI	GCTCC	3 cut(s)	145, 570, 1264
Lsp1109I	GCAGC	8 cut(s)	121, 337, 370, 620, 758, 923, 1144, 1243
LweI	GCATC	4 cut(s)	272, 758, 1020, 1291
MaeI	CTAG	4 cut(s)	284, 660, 1335, 1452
MaeII	ACGT	1 cut(s)	67
MaeIII	GTNAC	3 cut(s)	557, 984, 1111
MalI	GATC	7 cut(s)	46, 761, 897, 978, 1224, 1240, 1317
MboI	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
MboII	GAAGA	6 cut(s)	24, 856, 947, 1239, 1297, 1487
MfeI	CAATTG	1 cut(s)	420
MflI	RGATCY	2 cut(s)	1238, 1315
MhlI	GDGCHC	1 cut(s)	326
MlsI	TGGCCA	1 cut(s)	542
MluCI	AATT	6 cut(s)	420, 624, 813, 1044, 1272, 1455
MluNI	TGGCCA	1 cut(s)	542
MlyI	GAGTC	1 cut(s)	773
MmeI	TCCRAC	2 cut(s)	916, 1249
Mox20I	TGGCCA	1 cut(s)	542
Mph1103I	ATGCAT	1 cut(s)	1219
MroXI	GAANNNNTTC	2 cut(s)	407, 1276
MscI	TGGCCA	1 cut(s)	542
MseI	TTAA	4 cut(s)	9, 792, 1133, 1323
MslI	CAYNNNNRTG	4 cut(s)	548, 602, 647, 1124
Msp20I	TGGCCA	1 cut(s)	542
MspA1I	CMGCKG	1 cut(s)	1143
MspI	CCGG	2 cut(s)	54, 207
MspR9I	CCNGG	3 cut(s)	54, 208, 579
MunI	CAATTG	1 cut(s)	420
Mva1269I	GAATGC	1 cut(s)	1153
MvaI	CCWGG	1 cut(s)	579
MvnI	CGCG	1 cut(s)	1443
MwoI	GCNNNNNNNGC	7 cut(s)	203, 330, 359, 383, 528, 1157, 1457
NciI	CCSGG	2 cut(s)	54, 208
NcoI	CCATGG	2 cut(s)	845, 855
NdeII	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
NlaIII	CATG	9 cut(s)	82, 565, 646, 686, 781, 849, 859, 1018, 1042
NlaIV	GGNNCC	3 cut(s)	632, 1240, 1317
NmuCI	GTSAC	2 cut(s)	984, 1111
NsbI	TGCGCA	1 cut(s)	1023
NsiI	ATGCAT	1 cut(s)	1219
NspI	RCATGY	1 cut(s)	565
NspV	TTCGAA	2 cut(s)	879, 1233
PaqCI	CACCTGC	1 cut(s)	266
PceI	AGGCCT	1 cut(s)	1343
PciI	ACATGT	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	1 cut(s)	985
PctI	GAATGC	1 cut(s)	1153
PdmI	GAANNNNTTC	2 cut(s)	407, 1276
PfeI	GAWTC	2 cut(s)	160, 990
PkrI	GCNGC	9 cut(s)	136, 352, 385, 610, 748, 913, 1010, 1159, 1258
PleI	GAGTC	1 cut(s)	772
PpsI	GAGTC	1 cut(s)	772
PscI	ACATGT	1 cut(s)	561
Psp6I	CCWGG	1 cut(s)	577
PspFI	CCCAGC	2 cut(s)	333, 482
PspGI	CCWGG	1 cut(s)	577
PspN4I	GGNNCC	3 cut(s)	632, 1240, 1317
PspPI	GGNCC	5 cut(s)	4, 15, 209, 1166, 1438
PstI	CTGCAG	2 cut(s)	355, 748
PsuI	RGATCY	2 cut(s)	1238, 1315
PvuII	CAGCTG	1 cut(s)	1143
RsaI	GTAC	5 cut(s)	179, 282, 566, 733, 907
RsaNI	GTAC	5 cut(s)	178, 281, 565, 732, 906
RseI	CAYNNNNRTG	4 cut(s)	548, 602, 647, 1124
SaqAI	TTAA	4 cut(s)	9, 792, 1133, 1323
SatI	GCNGC	9 cut(s)	135, 351, 384, 609, 747, 912, 1009, 1158, 1257
Sau3AI	GATC	7 cut(s)	44, 759, 895, 976, 1222, 1238, 1315
Sau96I	GGNCC	5 cut(s)	4, 15, 209, 1166, 1438
ScaI	AGTACT	1 cut(s)	733
SchI	GAGTC	1 cut(s)	773
ScrFI	CCNGG	3 cut(s)	54, 208, 579
SduI	GDGCHC	1 cut(s)	326
SfaNI	GCATC	4 cut(s)	272, 758, 1020, 1291
SfcI	CTRYAG	2 cut(s)	351, 744
SfuI	TTCGAA	2 cut(s)	879, 1233
SinI	GGWCC	2 cut(s)	1166, 1438
SmiMI	CAYNNNNRTG	4 cut(s)	548, 602, 647, 1124
SmlI	CTYRAG	2 cut(s)	378, 1356
SmoI	CTYRAG	2 cut(s)	378, 1356
SpeI	ACTAGT	1 cut(s)	283
Sse9I	AATT	6 cut(s)	420, 624, 813, 1044, 1272, 1455
SseBI	AGGCCT	1 cut(s)	1343
SsiI	CCGC	5 cut(s)	301, 531, 1009, 1079, 1441
SspMI	CTAG	4 cut(s)	284, 660, 1335, 1452
StuI	AGGCCT	1 cut(s)	1343
StyD4I	CCNGG	3 cut(s)	52, 206, 577
StyI	CCWWGG	2 cut(s)	845, 855
TaaI	ACNGT	2 cut(s)	310, 905
TaiI	ACGT	1 cut(s)	70
TaqI	TCGA	6 cut(s)	43, 762, 879, 979, 1233, 1370
TasI	AATT	6 cut(s)	420, 624, 813, 1044, 1272, 1455
TatI	WGTACW	5 cut(s)	177, 280, 564, 731, 905
TauI	GCSGC	1 cut(s)	1011
TfiI	GAWTC	2 cut(s)	160, 990
Tru1I	TTAA	4 cut(s)	9, 792, 1133, 1323
Tru9I	TTAA	4 cut(s)	9, 792, 1133, 1323
TscAI	CASTG	6 cut(s)	196, 360, 405, 618, 1009, 1468
TseFI	GTSAC	2 cut(s)	984, 1111
TseI	GCWGC	8 cut(s)	134, 350, 383, 608, 746, 911, 1157, 1256
Tsp45I	GTSAC	2 cut(s)	984, 1111
TspDTI	ATGAA	6 cut(s)	226, 436, 586, 631, 794, 1027
TspRI	CASTG	6 cut(s)	196, 360, 405, 618, 1009, 1468
VpaK11BI	GGWCC	2 cut(s)	1166, 1438
XapI	RAATTY	2 cut(s)	1044, 1272
XceI	RCATGY	1 cut(s)	565
XmiI	GTMKAC	2 cut(s)	1089, 1331
XmnI	GAANNNNTTC	2 cut(s)	407, 1276
XspI	CTAG	4 cut(s)	284, 660, 1335, 1452
ZrmI	AGTACT	1 cut(s)	733
Zsp2I	ATGCAT	1 cut(s)	1219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.