Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007588

Physical Location & Seq

Genomic Coordinates Reverse (-)

16151036 .. 16165103

Gene Structure 14068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g24300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5526 bp

ATGGCGGCTCCAGAATCCGGCCCGCAGGGGCTGACGCGACGGCCGTCACGGAGCGCCGCGACGACGACGTTTTCGACGGAGGTCTTCGACAACGAGGTCGTCCCTTCCGCCATCGCTCCTATCGCTCCGCTCCTCCGCGTCGCCAACGAAGTCGAGCCCGAGCGACCTCGCGTTGCTTATCTCTGTCGGTTCTACGCGTTCGAGAAGGCGCACCGATTGGACCCCGGCTCCAGTGGACGTGGTGTGAGGCAGTTCAAGACCTTGCTCCTGCAACGATTGGAGAGGGAAAATGCATCGAGTCTTTCTGCTCGAGTTAAAAAGTCTGATGCCAGGGAAATTACAAGCTTCTATCAGCAATATTATGATCATTATGTCAAAGCTGTTCAAGAAGAGCAGGTAGACAGAGCTCAAGTGAGTAAAGCCTACAATACACTTAACCAACTTTTTGAAGTACTTTGCGGGGTTAACAAGTCAGAAAAAGTAGAGGAAGTTGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAAGAAAAGACGGAAATATACGCCCCGTATAATATTCTTCCTTTGGATTCTGCTGGTGCTACACAGTCTGTCATGCAGCTTGACGAGGTTAAGGCCGCTGTTGCTGCACTATGGAATACTCGTGGTTTGAACTGGCCAAGTGCATTCGAGCAGCACAGACAAAAAACTGCTGATCTGGATCTCCTCGATTGGCTTAGGGCCATGTTTGGCTTCCAGAGAGATAACGTTAGGAACCAGAGAGAGCATTTGATATTGCTACTTGCGAATATGCATATAAGACTCCATCCCAAACCTGAACCTCTTAACAAGCTTGATGATCGGGCTGTTGATGCAGTTCTGGACAAGCTTTTTAAGAACTACAAAATGTGGTGTAGATTTTTGGGACGGAAACATAGTTTAAGGCTACCTCAAGGTCAGCAGGAAGTACAACAGAGGAAGATACTTTACATGGGTTTATATCTTCTCATATGGGGTGAAGCAGCGAATGTTCGCTTTATGCCTGAATGCCTCTGCTATATTTTCCATAACATGGCATATGAACTCCATGGTCTCTTGGCTGGAAATGTCAGTATCGTCACTGGGGAAAATATAAAGCCTTCTTATGGTGGGGATGATGAGGCCTTTTTGAGGAAGGTTATAACCCCCCTATACCGTGTAATCGAAAAGGAAGCGAAGAAGAGCAGCAATGGAAAAGCTCCTCACACAGCCTGGTGCAACTATGACGATCTAAATGAATATTTCTGGTCATCTGATTGTTTCTCTCTTGGTTGGCCCATGCGTGATGATGGTGATTTTTTTAAATCAACTCGTGACTTGGCACAGGGAAGAAAGGGCTCTAAAAAAAAATCTGGAAGCACAGGAAAATCATATTTTATTGAAACTCGCACATTTTGGCACATCTTTCGAAGTTTTGATAGAATTTGGACATTTTATATACTGGCTCTACAGGCTATGCTCATTATTGCATTCAGCAAGGTTTCACTGCTGGATATATTTCGAAAGGATATCCTAGGAGATCTCTCAAGTATTTTCATTACAGCAGCATTTCTTCGAGTCCTTCAAAGTATTCTGGATATGGTTTTGAACTTCCCTGGGTATCACAGGTGTCGGTTCACAGATGTCCTGAGAAATATTCTGAAGATAGTTGTTAGTCTTGCGTGGGCAGTCATTCTTCCACTACTTTATGTGCATACCTTCGAAAATACCCCTAAACAACTTGCAGATATACTGTCATTCCTAAAGAAAATTGATGGAATTCCATCATTATATCTATTCGCTGTTGCAGTATATTTGCTTCCAAATGCCCTGACAGCAGTTTTGTTCCTATTCCCAATGCTCCGTCGTTTTATTGAAAATTCAGACTGGCATATCATCAGGGCTTTAAGGCATGGTAGTTTGGTTAATTCTAGGTATACTTTTTTCTGGGTGCTACTTTTGGCTTGCAAGTTTACAGTTAGCTATTTTGTCCAGATAAGACCTCTGGTAAAACCAACAGAAGACATAATGAGTATTCGTCGTGTTAGATATCAGTGGCATGAATTTTTCCCTGATGCTCAACACAACTATCCAGCAGTTGTCTCGCTCTGGGCACCTGTTATCTTGGTTTATTTCATGGACACACAAATTTGGTATGCTATATTTCAAACATTGTATGGAGGTATTGTTGGCGCCTTTGATCGCCTAGGAGAGATTCGAACTCTAGGCATGCTAAGATCCCGGTTCCAGTCTCTACCTGGGGCATTCAACACATATCTAGTGCCCTCGGATAAGTCAGCAAAAAGGGGATTTTCTTTCTCAAAGAAATTTGCGGAGATCCCAGTAGCATTAGACATGGCAGCTCAATTCAAAAACAAGGACGCTGATCTCTGGAAGCGGATATGTGGGGATGAATATATGAAGTGTGCGGTGATTGAATGTTATGAGTCTTTCAAACATGTCGTCAAGGCTTTGGTAGTTGGAGACAATGAGAAAAGGATCATTGGCATCATTATTAAGGAAATTGAAAGTAACATTTCCAAGAATACATTTCTTGACAGTTTTAGAATGGCCTCCTTACCCACTCTTTGCCAGAAATTTGTAGAGCTTGTGAAAGATGGTGATTCATCCAAACGATCTGCGGTGGTGCTGCTGCTGCAAGATATGCTAGAAGTTGTCACTCGTGATATGATGGTGAATGAGATCCGAGAGGTGGTTGAAGTTGGTCACAGTAGCAAGGACACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCTGCAATATTGTTTCCTCCCCCAGTTACAGCACAATGGGAAGAACAGATAAGACGCCTCCATCTGCTGTTGACCGTTAAGGAGTCTGCTATTGATGTACCAGTAAACCTTGAAGCACGTAGAAGGATTTCATTCTTTGCAAATTCATTGTTCATGGATATGCCCCGTGCTCCCCGTGTCCGTAAGATGCTTTCGTTCAGCATCTTGACTCCCTACTACAGTGAGGAGACTGTGTATTCCAAAAGTGACCTTGAGATGGAAAATGAAGATGGTGTATCAATCATATATTACTTGCAGAAGATTTTCCCAGATGAATGGACTAACTTCAAGGAGCGGCTCAATTGTAAAGAGGAAAGTGAAATATGGGAAAGTGAAGAGAACATTTTGCAGCTTCGCCATTGGGTCTCCTTACGAGGACAAACTCTCTGCAGGACAGTTAGAGGAATGATGTATTACCGACGAGCTCTGAAGCTTCAGGCTTTTCTCGATATGGCTGATGAAAAAGAGATACTAGAGGGCTACAAAGCCATCACGGTTTCACCAGACGATGAAAAGAAGAGCCGGAGATCCCTATTTGCTCAACTGGAAGCTGTGGCTGATCTTAAATTTACCTATGTTGCTACTTGTCAGAACTATGGCAATCAGAAGCGAAGTGGAGATCGTCGTGCAACTGATATCCTGAATCTAATGGTTAATAATCCCTCTCTCAGGGTTGCATATATTGATGAAGTTGAAGAACGAGAAGGTGAAAAGGTGCAAAAGGTTTACTATTCTGTGTTGGTCAAAGCAGTTGACAATCTTGACCAGGAAATATATCGTATAAAATTGCCGGGCTCAGCAAAGATTGGAGAAGGGAAGCCTGAAAACCAGAACCATGCAGTAATTTTCACTCGTGGAGAAGCTCTTCAGGCTATTGACATGAATCAGGACAATTACTTGGAAGAAGCTCTCAAGATGCGTAACCTTCTTGAAGAATTTAATGAGGATCACGGAGTGCGTCCGCCTTCAATTTTAGGTGTTCGTGAGCATATATTTACTGGAAGTGTTTCTTCATTGGCGTGGTTTATGTCAAATCAAGAAATGAGCTTCGTAACCATAGGTCAAAGAGTTCTTGCTAGACCTCTTAAGGTTCGCTTCCATTATGGACATCCAGATGTCTTTGATAGAATCTTCCACATTACTCGTGGTGGCATGAGCAAGGCTTCTCGTGGCATCAATCTCAGCGAGGATATTTTTGCAGGTTTCAATTCCACTCTAAGAAGAGGAAATGTCACTCACCATGAGTACATCCAAGTGGGGAAGGGTAGGGATGTAGGCCTCAACCAAATCTCTCTCTTTGAGGCTAAAGTTGCTTGTGGTAATGGAGAGCAAACACTGAGCAGAGACATCTATCGATTAGGGCACCGTTATGATTTCTTCCGCGTGTTGTCGTATTACTTCTCAACAATAGGATTTTATATCAGCTCATTGTTGGTTGTGATGACGGTCTATGCTTTCCTGTATGGTAGACTCTACTTGTCATTAAGTGGAATGGAAGAGACAATTACAAACTTTGCTGCCACCAAGGGAAATAATGCTCTACAAACAGCCATGGCTTCACAATCTGTTGTTCAATTAGGGTTGTTGACGTCCTTGCCCATGATTATGGAAATTGGACTTGAAAGAGGGTTCAGAACTGCATTAGGGGACACGATAATAATGCAGCTACAGCTAGCATCGGTTTTCTTTACTTTCTCACTGGGTACAAAGGTTCATTATTATGGGAGAACAATCCTGCATGGTGGGGCTAAATACAGAGCAACTGGTCGTGGCTTTGTTGTTCGGCATGAAAAGTTTGCTGAAAACTACAGGATGTACTCACGGAGTCACTTTACGAAAGGCCTGGAGCTTATGGTACTGCTTATTGTTTATATGATATTTGGCTCAGCAGCAGATGGCTCAGCAGCATATCTCTTCATCACATTCTCCATGTGGTTCTTGGTGCTTTCTTGGTTATTTGCACCCTTCCTCTTCAACCCTTCGGGATTTGAATGGCAAAAGATAGTGGAAGATTGGGATGATTGGTCAAAATGGATAACTAGCCGTGGTGGTATCGGTGTGCCAGCAAATAAGAGCTGGGAGTCATGGTGGGATGAAGAACAAGAGCACCTGCAGTTCACTGGGATGCTGGGACGCTTTTGGGAGATTGTACTTTCTCTGCGCTTCTTAATTTTCCAATATGGAATTGTGTACCATCTCAATGTTTCCAGGGGTGATAAAAGTATCATGGTTTATGCTCTGTCGTGGCTCGTCATTCTTGCTGTGGTGATTATCCTCAAGGTTGTATCCTTGGGTAGAAAAAGGTTCAGTGCTGATTTCCAGTTGATGTTCAGACTTCTCAAGTTGTTCGTCTTCATTGGCTTCGTAGTCACCATTGCGATACTTTTTATTTTCCTTAATCTCACTGTTGGTGACATCTTTATAAGCTTACTGGCCTTCTTGCCTACTGGGTGGGCGCTACTTATGATATCACAAGCATGCAGGCCAGCGGTGAAGGTCATCGGAATGTGGGGGTCTATAAAAGCTTTAGCAAGAGGGTACGAATACGTGATGGGACTGGTTATCTTTACCCCAGTGGCTGTCATGGCATGGTTCCCCTTTGTCACAGAGTTCCAGGCCAGGCTGCTATTCAACCAAGCTTTCAGTCGAGGGCTTCAGATCCAACGTATTCTTTCTGGTGGGAAGAAGCAGAAGTCTAAGTCTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006075 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009555 GO:0009556 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010208 GO:0010769 GO:0010927 GO:0016043 GO:0016049 GO:0016051 GO:0019953 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0030154 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034293 GO:0034637 GO:0034645 GO:0040007 GO:0040008 GO:0043062 GO:0043170 GO:0043900 GO:0043934 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044703 GO:0044706 GO:0045229 GO:0045595 GO:0048229 GO:0048236 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048646 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051273 GO:0051274 GO:0051321 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0080092 GO:0085029 GO:1901576 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKS1_dom1 Glucan_synthase Vta1

Protein Analysis

1842

Amino Acids

211.23

Weight (kDa)

9.1

Isoelectric Point (pI)

42.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vta1	PF04652	41 - 162	1.3e-12	Vta1 like
FKS1_dom1	PF14288	321 - 432	2.8e-42	1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1	PF25968	778 - 952	1.1e-57	Callose synthase 1 domain
Glucan_synthase	PF02364	959 - 1652	2.8e-231	1,3-beta-glucan synthase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13680
fragaria_vesca	FvH4_1g24300
malus_domestica	MD01G1004000.v1.1 MD01G1004100.v1.1 MD02G1211500.v1.1
prunus_persica	Prupe.4G271000_v2.0.a1
pyrus_communis	pycom01g02040 pycom15g30380
rosa_chinensis	RchiOBHm_Chr2g0120781
rosa_laevigata	RLG00000018581 RLG00000018588
rosa_roxburghii	Rroxscaffold_2G00122840 Rroxscaffold_2G00122950
rosa_rugosa	Rorug02G0231300
rosa_samantha	Rh2AG287900 Rh2AG288000 Rh2AG288100 Rh2BG299200 Rh2BG299300 Rh2CG277200 Rh2CG277300 Rh2DG313100 Rh2DG313200
rosa_wichuraiana	Rw2G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1163, 5240
AarI	CACCTGC	1 cut(s)	4935
AasI	GACNNNNNNGTC	1 cut(s)	95
AatII	GACGTC	1 cut(s)	4409
Acc36I	ACCTGC	4 cut(s)	385, 2788, 4007, 4935
AccB1I	GGYRCC	3 cut(s)	2113, 2192, 4179
AccB7I	CCANNNNNTGG	1 cut(s)	1054
AccBSI	CCGCTC	2 cut(s)	130, 3112
AccI	GTMKAC	3 cut(s)	399, 1937, 4285
AccII	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
AclI	AACGTT	1 cut(s)	750
AclWI	GGATC	8 cut(s)	711, 2232, 2332, 2507, 2698, 3339, 3771, 5470
AcoI	YGGCCR	2 cut(s)	41, 659
AcuI	CTGAAG	5 cut(s)	1682, 3236, 3266, 3668, 5456
AcyI	GRCGYC	3 cut(s)	2193, 2833, 4406
AdeI	CACNNNGTG	1 cut(s)	3772
AfiI	CCNNNNNNNGG	7 cut(s)	17, 1054, 1127, 1152, 2713, 3034, 3486
AflII	CTTAAG	1 cut(s)	3902
AflIII	ACRYGT	2 cut(s)	195, 2458
AjiI	CACGTC	1 cut(s)	239
AjnI	CCWGG	9 cut(s)	329, 1232, 1615, 2257, 3582, 4659, 5024, 5430, 5435
Alw21I	GWGCWC	4 cut(s)	409, 2950, 3244, 4926
Alw26I	GTCTC	8 cut(s)	1079, 2107, 2256, 2478, 2999, 3187, 4155, 4310
AlwI	GGATC	8 cut(s)	711, 2232, 2332, 2507, 2698, 3339, 3771, 5470
AlwNI	CAGNNNCTG	2 cut(s)	31, 5396
Ama87I	CYCGRG	2 cut(s)	158, 309
ArsI	GACNNNNNNTTYG	6 cut(s)	55, 87, 1825, 1857, 2448, 2480
Asp700I	GAANNNNTTC	4 cut(s)	2905, 3080, 3681, 3823
AspA2I	CCTAGG	2 cut(s)	1534, 2206
AspLEI	GCGC	5 cut(s)	56, 211, 2195, 4980, 5275
AspS9I	GGNCC	4 cut(s)	20, 220, 723, 1296
AsuC2I	CCSGG	3 cut(s)	225, 2242, 3609
AsuII	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
AsuNHI	GCTAGC	1 cut(s)	4489
AvaI	CYCGRG	2 cut(s)	158, 309
AvaII	GGWCC	1 cut(s)	220
AvrII	CCTAGG	2 cut(s)	1534, 2206
BaeGI	GKGCMC	3 cut(s)	2116, 2286, 4182
BaeI	ACNNNNGTAYC	2 cut(s)	4512, 4545
BalI	TGGCCA	1 cut(s)	661
BanI	GGYRCC	3 cut(s)	2113, 2192, 4179
BanII	GRGCYC	5 cut(s)	159, 409, 1361, 3244, 3614
BarI	GAAGNNNNNNTAC	4 cut(s)	953, 985, 1803, 1835
BauI	CACGAG	6 cut(s)	645, 1332, 2682, 3669, 3960, 3984
BbsI	GAAGAC	3 cut(s)	76, 2028, 5161
Bbv12I	GWGCWC	4 cut(s)	409, 2950, 3244, 4926
BceAI	ACGGC	3 cut(s)	28, 56, 4845
BcgI	CGANNNNNNTGC	6 cut(s)	1409, 1443, 2085, 2119, 4459, 4493
BciT130I	CCWGG	9 cut(s)	331, 1234, 1617, 2259, 3584, 4661, 5026, 5432, 5437
BciVI	GTATCC	1 cut(s)	5113
BclI	TGATCA	1 cut(s)	364
BcnI	CCSGG	3 cut(s)	225, 2242, 3609
BcoDI	GTCTC	8 cut(s)	1079, 2107, 2256, 2478, 2999, 3187, 4155, 4310
BfmI	CTRYAG	6 cut(s)	1469, 2995, 3205, 4484, 4624, 4928
BfoI	RGCGCY	3 cut(s)	57, 2196, 5276
BfrI	CTTAAG	1 cut(s)	3902
BfuAI	ACCTGC	4 cut(s)	385, 2788, 4007, 4935
BfuI	GTATCC	1 cut(s)	5113
BglII	AGATCT	1 cut(s)	1540
BlnI	CCTAGG	2 cut(s)	1534, 2206
BlpI	GCTNAGC	3 cut(s)	3613, 4702, 4717
BmcAI	AGTACT	1 cut(s)	453
Bme18I	GGWCC	1 cut(s)	220
BmeT110I	CYCGRG	2 cut(s)	158, 309
BmgBI	CACGTC	1 cut(s)	239
BmgT120I	GGNCC	4 cut(s)	20, 220, 723, 1296
BmiI	GGNNCC	9 cut(s)	9, 222, 229, 758, 2115, 2194, 2246, 4181, 5411
BmrI	ACTGGG	7 cut(s)	1113, 2336, 2795, 4526, 4947, 5274, 5384
BmtI	GCTAGC	1 cut(s)	4493
BmuI	ACTGGG	7 cut(s)	1113, 2336, 2795, 4526, 4947, 5274, 5384
BoxI	GACNNNNGTC	2 cut(s)	43, 80
BpiI	GAAGAC	3 cut(s)	76, 2028, 5161
BpmI	CTGGAG	2 cut(s)	214, 4682
Bpu10I	CCTNAGC	1 cut(s)	719
Bpu1102I	GCTNAGC	3 cut(s)	3613, 4702, 4717
Bpu14I	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
BpuEI	CTTGAG	7 cut(s)	393, 918, 1531, 3050, 3713, 5078, 5141
BpuMI	CCSGG	3 cut(s)	225, 2242, 3609
Bsa29I	ATCGAT	1 cut(s)	4171
BsaAI	YACGTR	2 cut(s)	2897, 5365
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	3 cut(s)	2193, 2833, 4406
BsaI	GGTCTC	2 cut(s)	1079, 3187
BsaXI	ACNNNNNCTCC	8 cut(s)	212, 242, 2172, 2202, 2996, 3026, 4889, 4919
Bsc4I	CCNNNNNNNGG	7 cut(s)	17, 1054, 1127, 1152, 2713, 3034, 3486
Bse3DI	GCAATG	2 cut(s)	1216, 5190
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	9 cut(s)	331, 1234, 1617, 2259, 3584, 4661, 5026, 5432, 5437
BseCI	ATCGAT	1 cut(s)	4171
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	7 cut(s)	17, 1054, 1127, 1152, 2713, 3034, 3486
BseMI	GCAATG	2 cut(s)	1216, 5190
BseMII	CTCAG	8 cut(s)	489, 1640, 3499, 3627, 4012, 4145, 4716, 4731
BseRI	GAGGAG	4 cut(s)	122, 698, 1212, 3017
BseSI	GKGCMC	3 cut(s)	2116, 2286, 4182
BseX3I	CGGCCG	1 cut(s)	41
BseYI	CCCAGC	2 cut(s)	4893, 4945
BsgI	GTGCAG	1 cut(s)	615
Bsh1236I	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
Bsh1285I	CGRYCG	1 cut(s)	44
BshNI	GGYRCC	3 cut(s)	2113, 2192, 4179
BshVI	ATCGAT	1 cut(s)	4171
BsiEI	CGRYCG	1 cut(s)	44
BsiHKAI	GWGCWC	4 cut(s)	409, 2950, 3244, 4926
BsiHKCI	CYCGRG	2 cut(s)	158, 309
BsiSI	CCGG	5 cut(s)	18, 225, 2242, 3340, 3608
BslFI	GGGAC	5 cut(s)	86, 921, 4478, 4962, 5385
BslI	CCNNNNNNNGG	7 cut(s)	17, 1054, 1127, 1152, 2713, 3034, 3486
BsmAI	GTCTC	8 cut(s)	1079, 2107, 2256, 2478, 2999, 3187, 4155, 4310
BsmFI	GGGAC	5 cut(s)	86, 921, 4478, 4962, 5385
BsmI	GAATGC	4 cut(s)	668, 1034, 1490, 2264
Bso31I	GGTCTC	2 cut(s)	1079, 3187
BsoBI	CYCGRG	2 cut(s)	158, 309
Bsp119I	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
Bsp1720I	GCTNAGC	3 cut(s)	3613, 4702, 4717
Bsp19I	CCATGG	2 cut(s)	1069, 4368
BspCNI	CTCAG	8 cut(s)	490, 1641, 3498, 3626, 4011, 4146, 4715, 4730
BspDI	ATCGAT	1 cut(s)	4171
BspFNI	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
BspLI	GGNNCC	9 cut(s)	9, 222, 229, 758, 2115, 2194, 2246, 4181, 5411
BspMAI	CTGCAG	2 cut(s)	3209, 4932
BspMI	ACCTGC	4 cut(s)	385, 2788, 4007, 4935
BspOI	GCTAGC	1 cut(s)	4493
BspPI	GGATC	8 cut(s)	711, 2232, 2332, 2507, 2698, 3339, 3771, 5470
BspQI	GCTCTTC	4 cut(s)	384, 1196, 3329, 3687
BspT104I	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
BspT107I	GGYRCC	3 cut(s)	2113, 2192, 4179
BspTI	CTTAAG	1 cut(s)	3902
BspTNI	GGTCTC	2 cut(s)	1079, 3187
BsrBI	CCGCTC	2 cut(s)	130, 3112
BsrDI	GCAATG	2 cut(s)	1216, 5190
BssNAI	GTATAC	1 cut(s)	1938
BssNI	GRCGYC	3 cut(s)	2193, 2833, 4406
BssSI	CACGAG	6 cut(s)	645, 1332, 2682, 3669, 3960, 3984
BssT1I	CCWWGG	6 cut(s)	1069, 1534, 2206, 4341, 4368, 5106
Bst1107I	GTATAC	1 cut(s)	1938
Bst2BI	CACGAG	6 cut(s)	645, 1332, 2682, 3669, 3960, 3984
Bst2UI	CCWGG	9 cut(s)	331, 1234, 1617, 2259, 3584, 4661, 5026, 5432, 5437
Bst6I	CTCTTC	9 cut(s)	384, 1196, 3147, 3329, 3687, 4033, 4308, 4736, 4793
BstACI	GRCGYC	3 cut(s)	2193, 2833, 4406
BstAFI	CTTAAG	1 cut(s)	3902
BstAPI	GCANNNNNTGC	2 cut(s)	2665, 2780
BstBAI	YACGTR	2 cut(s)	2897, 5365
BstBI	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
BstC8I	GCNNGC	8 cut(s)	23, 1966, 2231, 4491, 4881, 5296, 5300, 5304
BstDSI	CCRYGG	3 cut(s)	1069, 4368, 4861
BstENI	CCTNNNNNAGG	2 cut(s)	1150, 3484
BstFNI	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
BstH2I	RGCGCY	3 cut(s)	57, 2196, 5276
BstHHI	GCGC	5 cut(s)	56, 211, 2195, 4980, 5275
BstMAI	GTCTC	8 cut(s)	1079, 2107, 2256, 2478, 2999, 3187, 4155, 4310
BstMCI	CGRYCG	1 cut(s)	44
BstNI	CCWGG	9 cut(s)	331, 1234, 1617, 2259, 3584, 4661, 5026, 5432, 5437
BstNSI	RCATGY	3 cut(s)	2233, 2462, 5298
BstPAI	GACNNNNGTC	2 cut(s)	43, 80
BstSFI	CTRYAG	6 cut(s)	1469, 2995, 3205, 4484, 4624, 4928
BstSLI	GKGCMC	3 cut(s)	2116, 2286, 4182
BstUI	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
BstV2I	GAAGAC	3 cut(s)	76, 2028, 5161
BstX2I	RGATCY	7 cut(s)	703, 1540, 2237, 2337, 2703, 3344, 5475
BstXI	CCANNNNNNTGG	2 cut(s)	3093, 4423
BstYI	RGATCY	7 cut(s)	703, 1540, 2237, 2337, 2703, 3344, 5475
BstZ17I	GTATAC	1 cut(s)	1938
BstZI	CGGCCG	1 cut(s)	41
Bsu15I	ATCGAT	1 cut(s)	4171
BsuI	GTATCC	1 cut(s)	5113
BsuTUI	ATCGAT	1 cut(s)	4171
BtgI	CCRYGG	3 cut(s)	1069, 4368, 4861
BtgZI	GCGATG	1 cut(s)	97
BtrI	CACGTC	1 cut(s)	239
BtsI	GCAGTG	1 cut(s)	1505
BveI	ACCTGC	4 cut(s)	385, 2788, 4007, 4935
Cac8I	GCNNGC	8 cut(s)	23, 1966, 2231, 4491, 4881, 5296, 5300, 5304
CaiI	CAGNNNCTG	2 cut(s)	31, 5396
CfoI	GCGC	5 cut(s)	56, 211, 2195, 4980, 5275
Cfr13I	GGNCC	4 cut(s)	20, 220, 723, 1296
ClaI	ATCGAT	1 cut(s)	4171
CseI	GACGC	6 cut(s)	43, 127, 2390, 2841, 3764, 4959
DinI	GGCGCC	1 cut(s)	2194
DraI	TTTAAA	1 cut(s)	1324
DraIII	CACNNNGTG	1 cut(s)	3772
DrdI	GACNNNNNNGTC	1 cut(s)	95
DseDI	GACNNNNNNGTC	1 cut(s)	95
EaeI	YGGCCR	2 cut(s)	41, 659
EagI	CGGCCG	1 cut(s)	41
Eam1104I	CTCTTC	9 cut(s)	384, 1196, 3147, 3329, 3687, 4033, 4308, 4736, 4793
EarI	CTCTTC	9 cut(s)	384, 1196, 3147, 3329, 3687, 4033, 4308, 4736, 4793
EciI	GGCGGA	2 cut(s)	97, 3768
Ecl136II	GAGCTC	2 cut(s)	407, 3242
EclXI	CGGCCG	1 cut(s)	41
Eco130I	CCWWGG	6 cut(s)	1069, 1534, 2206, 4341, 4368, 5106
Eco147I	AGGCCT	3 cut(s)	1145, 4095, 4659
Eco24I	GRGCYC	5 cut(s)	159, 409, 1361, 3244, 3614
Eco31I	GGTCTC	2 cut(s)	1079, 3187
Eco32I	GATATC	4 cut(s)	1531, 2051, 3454, 5286
Eco47I	GGWCC	1 cut(s)	220
Eco52I	CGGCCG	1 cut(s)	41
Eco53kI	GAGCTC	2 cut(s)	407, 3242
Eco57I	CTGAAG	5 cut(s)	1682, 3236, 3266, 3668, 5456
Eco88I	CYCGRG	2 cut(s)	158, 309
EcoICRI	GAGCTC	2 cut(s)	407, 3242
EcoNI	CCTNNNNNAGG	2 cut(s)	1150, 3484
EcoRI	GAATTC	1 cut(s)	1779
EcoRII	CCWGG	9 cut(s)	329, 1232, 1615, 2257, 3582, 4659, 5024, 5430, 5435
EcoRV	GATATC	4 cut(s)	1531, 2051, 3454, 5286
EcoT14I	CCWWGG	6 cut(s)	1069, 1534, 2206, 4341, 4368, 5106
EcoT22I	ATGCAT	2 cut(s)	295, 798
EcoT38I	GRGCYC	5 cut(s)	159, 409, 1361, 3244, 3614
EgeI	GGCGCC	1 cut(s)	2194
EheI	GGCGCC	1 cut(s)	2194
ErhI	CCWWGG	6 cut(s)	1069, 1534, 2206, 4341, 4368, 5106
FalI	AAGNNNNNCTT	4 cut(s)	3811, 3843, 3896, 3928
FaqI	GGGAC	5 cut(s)	86, 921, 4478, 4962, 5385
FauI	CCCGC	2 cut(s)	30, 452
FauNDI	CATATG	2 cut(s)	992, 1060
FbaI	TGATCA	1 cut(s)	364
FblI	GTMKAC	3 cut(s)	399, 1937, 4285
FriOI	GRGCYC	5 cut(s)	159, 409, 1361, 3244, 3614
GlaI	GCGC	5 cut(s)	55, 210, 2194, 4979, 5274
GsaI	CCCAGC	2 cut(s)	4897, 4949
GsuI	CTGGAG	2 cut(s)	214, 4682
HaeII	RGCGCY	3 cut(s)	57, 2196, 5276
HapII	CCGG	5 cut(s)	18, 225, 2242, 3340, 3608
HgaI	GACGC	6 cut(s)	43, 127, 2390, 2841, 3764, 4959
HhaI	GCGC	5 cut(s)	56, 211, 2195, 4980, 5275
Hin1I	GRCGYC	3 cut(s)	2193, 2833, 4406
Hin6I	GCGC	5 cut(s)	54, 209, 2193, 4978, 5273
HinP1I	GCGC	5 cut(s)	54, 209, 2193, 4978, 5273
HincII	GTYRAC	4 cut(s)	466, 2850, 3571, 4404
HindII	GTYRAC	4 cut(s)	466, 2850, 3571, 4404
HindIII	AAGCTT	7 cut(s)	343, 833, 869, 3248, 5242, 5340, 5454
HpaI	GTTAAC	1 cut(s)	466
HpaII	CCGG	5 cut(s)	18, 225, 2242, 3340, 3608
HpyCH4IV	ACGT	7 cut(s)	68, 238, 750, 2896, 4406, 5364, 5482
HpySE526I	ACGT	7 cut(s)	68, 238, 750, 2896, 4406, 5364, 5482
Hsp92I	GRCGYC	3 cut(s)	2193, 2833, 4406
HspAI	GCGC	5 cut(s)	54, 209, 2193, 4978, 5273
KasI	GGCGCC	1 cut(s)	2192
Ksp22I	TGATCA	1 cut(s)	364
KspAI	GTTAAC	1 cut(s)	466
LguI	GCTCTTC	4 cut(s)	384, 1196, 3329, 3687
MaeII	ACGT	7 cut(s)	68, 238, 750, 2896, 4406, 5364, 5482
MbiI	CCGCTC	2 cut(s)	130, 3112
MfeI	CAATTG	1 cut(s)	3118
MflI	RGATCY	7 cut(s)	703, 1540, 2237, 2337, 2703, 3344, 5475
MlsI	TGGCCA	1 cut(s)	661
MluI	ACGCGT	1 cut(s)	195
MluNI	TGGCCA	1 cut(s)	661
Mly113I	GGCGCC	1 cut(s)	2193
MlyI	GAGTC	9 cut(s)	307, 798, 1587, 2456, 2870, 2980, 4281, 4651, 4907
MmeI	TCCRAC	2 cut(s)	2461, 5503
Mox20I	TGGCCA	1 cut(s)	661
Mph1103I	ATGCAT	2 cut(s)	295, 798
MroXI	GAANNNNTTC	4 cut(s)	2905, 3080, 3681, 3823
MscI	TGGCCA	1 cut(s)	661
Msp20I	TGGCCA	1 cut(s)	661
MspA1I	CMGCKG	3 cut(s)	512, 623, 5306
MspCI	CTTAAG	1 cut(s)	3902
MspI	CCGG	5 cut(s)	18, 225, 2242, 3340, 3608
MunI	CAATTG	1 cut(s)	3118
Mva1269I	GAATGC	4 cut(s)	668, 1034, 1490, 2264
MvaI	CCWGG	9 cut(s)	331, 1234, 1617, 2259, 3584, 4661, 5026, 5432, 5437
MvnI	CGCG	6 cut(s)	37, 59, 138, 171, 197, 4200
NarI	GGCGCC	1 cut(s)	2193
NciI	CCSGG	3 cut(s)	225, 2242, 3609
NcoI	CCATGG	2 cut(s)	1069, 4368
NdeI	CATATG	2 cut(s)	992, 1060
NheI	GCTAGC	1 cut(s)	4489
NlaIV	GGNNCC	9 cut(s)	9, 222, 229, 758, 2115, 2194, 2246, 4181, 5411
NsiI	ATGCAT	2 cut(s)	295, 798
NspI	RCATGY	3 cut(s)	2233, 2462, 5298
NspV	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
PaeI	GCATGC	2 cut(s)	2233, 5298
PaeR7I	CTCGAG	1 cut(s)	309
PaqCI	CACCTGC	1 cut(s)	4935
PasI	CCCWGGG	1 cut(s)	1616
PceI	AGGCCT	3 cut(s)	1145, 4095, 4659
PciI	ACATGT	1 cut(s)	2458
PciSI	GCTCTTC	4 cut(s)	384, 1196, 3329, 3687
PcsI	WCGNNNNNNNCGW	2 cut(s)	41, 71
PctI	GAATGC	4 cut(s)	668, 1034, 1490, 2264
PdmI	GAANNNNTTC	4 cut(s)	2905, 3080, 3681, 3823
PfeI	GAWTC	7 cut(s)	14, 572, 2215, 2624, 3460, 3700, 3945
PflMI	CCANNNNNTGG	1 cut(s)	1054
PleI	GAGTC	9 cut(s)	306, 798, 1586, 2455, 2869, 2980, 4281, 4650, 4906
PluTI	GGCGCC	1 cut(s)	2196
PpsI	GAGTC	9 cut(s)	306, 798, 1586, 2455, 2869, 2980, 4281, 4650, 4906
Ppu21I	YACGTR	2 cut(s)	2897, 5365
PscI	ACATGT	1 cut(s)	2458
PshAI	GACNNNNGTC	2 cut(s)	43, 80
PsiI	TTATAA	2 cut(s)	1163, 5240
Psp124BI	GAGCTC	2 cut(s)	409, 3244
Psp1406I	AACGTT	1 cut(s)	750
Psp6I	CCWGG	9 cut(s)	329, 1232, 1615, 2257, 3582, 4659, 5024, 5430, 5435
PspFI	CCCAGC	2 cut(s)	4893, 4945
PspGI	CCWGG	9 cut(s)	329, 1232, 1615, 2257, 3582, 4659, 5024, 5430, 5435
PspN4I	GGNNCC	9 cut(s)	9, 222, 229, 758, 2115, 2194, 2246, 4181, 5411
PspPI	GGNCC	4 cut(s)	20, 220, 723, 1296
PspXI	VCTCGAGB	1 cut(s)	309
PstI	CTGCAG	2 cut(s)	3209, 4932
PstNI	CAGNNNCTG	2 cut(s)	31, 5396
PsuI	RGATCY	7 cut(s)	703, 1540, 2237, 2337, 2703, 3344, 5475
PvuII	CAGCTG	1 cut(s)	512
SacI	GAGCTC	2 cut(s)	409, 3244
SapI	GCTCTTC	4 cut(s)	384, 1196, 3329, 3687
Sau96I	GGNCC	4 cut(s)	20, 220, 723, 1296
ScaI	AGTACT	1 cut(s)	453
SchI	GAGTC	9 cut(s)	307, 798, 1587, 2456, 2870, 2980, 4281, 4651, 4907
SfcI	CTRYAG	6 cut(s)	1469, 2995, 3205, 4484, 4624, 4928
SfoI	GGCGCC	1 cut(s)	2194
Sfr274I	CTCGAG	1 cut(s)	309
SfuI	TTCGAA	4 cut(s)	1429, 1522, 1722, 2218
SinI	GGWCC	1 cut(s)	220
SlaI	CTCGAG	1 cut(s)	309
SmlI	CTYRAG	9 cut(s)	309, 408, 933, 1546, 3029, 3728, 3902, 5093, 5156
SmoI	CTYRAG	9 cut(s)	309, 408, 933, 1546, 3029, 3728, 3902, 5093, 5156
SphI	GCATGC	2 cut(s)	2233, 5298
SseBI	AGGCCT	3 cut(s)	1145, 4095, 4659
SspDI	GGCGCC	1 cut(s)	2192
SspI	AATATT	5 cut(s)	359, 559, 1262, 1657, 2787
SstI	GAGCTC	2 cut(s)	409, 3244
StuI	AGGCCT	3 cut(s)	1145, 4095, 4659
StyI	CCWWGG	6 cut(s)	1069, 1534, 2206, 4341, 4368, 5106
TaiI	ACGT	7 cut(s)	71, 241, 753, 2899, 4409, 5367, 5485
TatI	WGTACW	5 cut(s)	451, 949, 4062, 4632, 4966
TauI	GCSGC	4 cut(s)	8, 59, 623, 3115
TfiI	GAWTC	7 cut(s)	14, 572, 2215, 2624, 3460, 3700, 3945
TspGWI	ACGGA	8 cut(s)	64, 92, 551, 925, 1853, 2948, 3783, 4654
Van91I	CCANNNNNTGG	1 cut(s)	1054
Vha464I	CTTAAG	1 cut(s)	3902
VpaK11BI	GGWCC	1 cut(s)	220
XagI	CCTNNNNNAGG	2 cut(s)	1150, 3484
XceI	RCATGY	3 cut(s)	2233, 2462, 5298
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2255, 3959, 4753
XhoI	CTCGAG	1 cut(s)	309
XmaJI	CCTAGG	2 cut(s)	1534, 2206
XmiI	GTMKAC	3 cut(s)	399, 1937, 4285
XmnI	GAANNNNTTC	4 cut(s)	2905, 3080, 3681, 3823
ZraI	GACGTC	1 cut(s)	4407
ZrmI	AGTACT	1 cut(s)	453
Zsp2I	ATGCAT	2 cut(s)	295, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.