Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007588

Physical Location & Seq

Genomic Coordinates Reverse (-)

30522439 .. 30529462

Gene Structure 7024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG277200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3273 bp

ATGGATTTGCTGCTGGTTCCTTATTCTTCAGATACGAGCCTGAAAATAATTCAGTGGCCACCTTTCTTGCTTGCTAGCAAAATCCCAATAGCATTAGATATGGCAGCTCAATTCAAAAACAAGGACTCTGATCTCTGGAAGCGGATATGTGGAGATGAATATATGAAGTGTGCTGTGATTGAATGTTATGAGTCTTTCAAACATGTCCTTAAGGCTTTGGTGGTTGGAGAAAATGAGAAAAGGATCATTGGCATCATTATTAAGGAAATTGAAAGTAACATTTCCAAGAATACATTTCTTGATAATTTTAGAATGGCCTCTTTACCCACTCTCTGCCAGAAATTTGTAGAGCTTGTGGTGATCTTGAAAGATGGTGATTCATCCAAGCGATCTGCGGTGGTGCTGCTGCTGCAAGATATGTTGGAAGTTGTCACTCGTGATATGATGGTGAATGAGATCCGAGAGGTGGTTGAAGTTGGCCATAGTAGCAAGGACACTGGAAGGCAGCTTTTTGCTGGTACTGATGCAAAACCTGCGATCGTATTCCCTCCTCCAGTTACAGCACAATGGGAAGAACAGATAAGGCGCCTCCATCTGCTGTTGACTGTTAAGGAGTCTGCAATTGATGTACCAATAAACCTTGAAGCACGTAGAAGGATTTCATTCTTTGCAAATTCATTGTTCATGGATATGCCCCGTGCTCCCCGTGTTCGTAAGATGCTTTCGTTCAGCATTTTGACTCCCTACTATAGTGAGGAGACTGTGTATTCCAAAAGTGACCTTGAGATGGAAAATGAAGATGGTGTATCAATCATATATTACTTGCAGAAGATTTTCCCAGATGAATGGACTAACTTCATGGAGCGGCTTAATTGTAAAAAGGATGCTGAAATATGGGAAAATGAAGAGAACATTTTGCAGCTGCGTCATTGGGTCTCCTTACGAGGACAAACTCTCTGCAGGACAGTTAGAGGAATGATGTATTACCGACGAGCTCTGAAGCTTCAGGCTTTTCTTGATATGGCTAATGAAGAAGAGATACTAGAAGGGTACAAAGCCGTCACAGTTTCACCAGAGGACGAAAAGAAGAGCCGGAGATCCCTATTTGCTCAACTAGAAGCAGTGGCTGATCTTAAATTTACCTATGTTGCTACTTGCCAAAACTATGGCAATCAGAAGCGAAGTGGAGATCGTCGTGCAACTGACATCCTGAATCTGATGGTTAATAATCCCTCTCTCAGGGTTGCATATATTGATGAAGTTGAAGAACGAGAAGGTGAAAAGGTGCAAAAGGTTTACTATTCTGTATTGGTCAAAGCAGTTGACAACCTTGACCAGGAAATATATCGTATAAAATTGCCAGGCTCAGCAAAGATTGGAGAAGGGAAGCCTGAAAACCAGAACCATGCAGTAATCTTTACTCGTGGAGAAGCTCTTCAGGCTATTGACATGAATCAGGACAATTACTTGGAAGAAGCTCTTAAGATGCGTAACCTTCTTGAAGAATTTAATGAGGATCACGGAGTGCGTTCGCCTTCAATTTTAGGTGTTCGTGAGCATATCTTTACTGGAAGTGTTTCTTCGTTGGCGTGGTTTATGTCAAATCAAGAAATGAGCTTCGTGACCATCGGTCAAAGAGTTCTTGCTAGACCTCTTAAGGTTCGGTTCCATTATGGACATCCAGATGTCTTTGATAGAATCTTCCATATTACTCGTGGTGGCATGAGCAAGGCTTCTCGTGGGATCAATCTCAGCGAGGATATTTTTGCAGGTTTCAATTCCACTCTAAGAAGAGGAAATGTCACTCACCATGAGTACATCCAAGTTGGGAAGGGTAGGGATGTTGGCCTCAATCAAATCTCTCTCTTTGAGGCTAAAGTTGCTTGCGGTAATGGAGAGCAGACACTTAGCAGAGACATCTATCGATTAGGGCACCGTTATGATTTCTTCCGCATGTTGTCGTATTACTTTTCAACAATAGGATTTTATATCAGCTCAATGTTGGTTGTGATGACGGTCTACTCTTTCCTGTATGGTAGACTCTACTTGTCATTGAGTGGAATGGAGAAGACAATTATAACCTATGCTGCTAGAAGGGGAAATAATGCTCTACAAACAGCTATGGCTTCACAATCTGTTGTCCAATTAGGTTTGTTGACGTCCTTGCCCATGATCATGGAAATCGGACTTGAAAGAGGGTTCAGAACTGCATTAGGGGACACGATAATAATGCAGCTGCAGCTAGCATCAGTTTTCTTTACTTTCTCACTGGGTACAAAGGTTCATTACTATGGGAGAACAATCCTGCATGGTGGGGCTAAGTACAGAGCAACTGGCCGTGGCTTTGTTGTTCGGCATGAGAGGTTTGGTGAAAACTACAGGATGTACTCACGGAGTCACTTTACAAAAGGCCTGGAGCTTATGATTCTGCTTATTATTTATAGTATATATGGCTCAGCAGCAGATGGCTCAGCTGCATATATCTTCATCACATTCTCCATGTGGTTCTTAGTGATTTCTTGGTTATTTGCCCCCTTCCTCTTCAACCCTTCGGGATTTGAATGGCAAAAAATAGTGGAAGATTGGGATGATTGGTCAAAATGGATAACTAGCCGTGGTGGTATTGGTGTGCCAGCAAATAAGAGCTGGGAGTCCTGGTGGGATGAGGAACAGGAGCACCTGCAGCACACTGGGATGTTGGGACGGTTTTGGGAGATTGTACTTTCTCTGCGCTTCTTTCTTTTCCAATATGGAATTGTCTACCATCTCAATGTTTCCAGGGGTGATAAAAGTATCATGGTTTATGCTCTGTCATGGCTCGTCATTGTTGCTGTGATGATTATCCTCAAGATTGTATCCTTGGGTAGAAAAAGGTTCAGTGCCGATTTCCAGCTGATGTTCAGACTTCTGAAGTTGTTCGTCTTCATTGGGTTTGTCGTCACCATTGCAGTACTTTTTATTTTCCTTAGTCTCACTGTTGGTGACATCTTTGTAAGCTTACTGGCCTTCTTGCCTACTGGGTGGGCAATACTTATGATATCACAAGCGTGCAGGCCATTGGTGAAGGTCTTAGGAATGTGGGGGTCTGTAAAAGCTCTAGCAAGAGGGTACGAGTACGTGATGGGACTGGTTATCTTTACTCCGGTGGCTGTTCTGGCATGGTTCCCATTTGTCTCAGAGTTCCAGACCAGGCTGCTATTCAACCAGGCTTTCAGTCGAGGCCTTCAGATCCAACGTATTCTTTCTGGTGGGAAGAAGCAAAAGTCCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006075 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009555 GO:0009556 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010208 GO:0010769 GO:0010927 GO:0016043 GO:0016049 GO:0016051 GO:0019953 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0030154 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034293 GO:0034637 GO:0034645 GO:0040007 GO:0040008 GO:0043062 GO:0043170 GO:0043900 GO:0043934 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044703 GO:0044706 GO:0045229 GO:0045595 GO:0048229 GO:0048236 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048646 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051273 GO:0051274 GO:0051321 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0080092 GO:0085029 GO:1901576 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKS1_dom1 Glucan_synthase Vta1

Protein Analysis

1090

Amino Acids

125.0

Weight (kDa)

8.89

Isoelectric Point (pI)

38.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CALS1	PF25968	20 - 203	4.4e-68	Callose synthase 1 domain
Glucan_synthase	PF02364	211 - 904	3.8e-232	1,3-beta-glucan synthase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13680
fragaria_vesca	FvH4_1g24300
malus_domestica	MD01G1004000.v1.1 MD01G1004100.v1.1 MD02G1211500.v1.1
prunus_persica	Prupe.4G271000_v2.0.a1
pyrus_communis	pycom01g02040 pycom15g30380
rosa_chinensis	RchiOBHm_Chr2g0120781
rosa_laevigata	RLG00000018581 RLG00000018588
rosa_roxburghii	Rroxscaffold_2G00122840 Rroxscaffold_2G00122950
rosa_rugosa	Rorug02G0231300
rosa_samantha	Rh2AG287900 Rh2AG288000 Rh2AG288100 Rh2BG299200 Rh2BG299300 Rh2CG277200 Rh2CG277300 Rh2DG313100 Rh2DG313200
rosa_wichuraiana	Rw2G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2078
AarI	CACCTGC	1 cut(s)	2688
AatII	GACGTC	1 cut(s)	2162
Acc36I	ACCTGC	3 cut(s)	541, 1760, 2688
AccB1I	GGYRCC	2 cut(s)	585, 1932
AccBSI	CCGCTC	1 cut(s)	865
AccI	GTMKAC	3 cut(s)	2019, 2038, 2760
AciI	CCGC	5 cut(s)	142, 395, 865, 1887, 1951
AclWI	GGATC	6 cut(s)	251, 451, 1092, 1524, 1751, 3223
AcoI	YGGCCR	3 cut(s)	56, 478, 2335
AcsI	RAATTY	4 cut(s)	341, 673, 1136, 1505
AcuI	CTGAAG	6 cut(s)	12, 989, 1019, 1421, 2930, 3209
AcyI	GRCGYC	2 cut(s)	586, 2159
AdeI	CACNNNGTG	1 cut(s)	1525
AfiI	CCNNNNNNNGG	4 cut(s)	466, 787, 1239, 1336
AflII	CTTAAG	3 cut(s)	209, 1481, 1655
AflIII	ACRYGT	1 cut(s)	202
AhdI	GACNNNNNGTC	1 cut(s)	1629
AjnI	CCWGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
AleI	CACNNNNGTG	1 cut(s)	3046
Alw21I	GWGCWC	3 cut(s)	703, 997, 2679
Alw26I	GTCTC	5 cut(s)	752, 940, 1908, 2975, 3178
AlwI	GGATC	6 cut(s)	251, 451, 1092, 1524, 1751, 3223
AlwNI	CAGNNNCTG	1 cut(s)	1127
AoxI	GGCC	9 cut(s)	56, 315, 478, 1846, 2335, 2410, 3003, 3053, 3220
ApoI	RAATTY	4 cut(s)	341, 673, 1136, 1505
Asp700I	GAANNNNTTC	5 cut(s)	658, 833, 1434, 1576, 2915
AspLEI	GCGC	2 cut(s)	588, 2733
AsuNHI	GCTAGC	2 cut(s)	74, 2242
BaeGI	GKGCMC	1 cut(s)	1935
BaeI	ACNNNNGTAYC	2 cut(s)	2265, 2298
BalI	TGGCCA	2 cut(s)	58, 480
BanI	GGYRCC	2 cut(s)	585, 1932
BanII	GRGCYC	1 cut(s)	997
BarI	GAAGNNNNNNTAC	2 cut(s)	1023, 1055
BauI	CACGAG	4 cut(s)	435, 1422, 1713, 1737
BbsI	GAAGAC	2 cut(s)	2075, 2914
Bbv12I	GWGCWC	3 cut(s)	703, 997, 2679
BceAI	ACGGC	3 cut(s)	1043, 2322, 2598
BcgI	CGANNNNNNTGC	2 cut(s)	2212, 2246
BciT130I	CCWGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
BciVI	GTATCC	1 cut(s)	2866
BclI	TGATCA	1 cut(s)	2172
BcoDI	GTCTC	5 cut(s)	752, 940, 1908, 2975, 3178
BfaI	CTAG	8 cut(s)	75, 1043, 1115, 1647, 2091, 2243, 2610, 3098
BfmI	CTRYAG	5 cut(s)	748, 958, 2237, 2377, 2681
BfoI	RGCGCY	1 cut(s)	589
BfrI	CTTAAG	3 cut(s)	209, 1481, 1655
BfuAI	ACCTGC	3 cut(s)	541, 1760, 2688
BfuI	GTATCC	1 cut(s)	2866
BlpI	GCTNAGC	3 cut(s)	1366, 2455, 2470
BmcAI	AGTACT	1 cut(s)	2952
Bme1390I	CCNGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
BmeRI	GACNNNNNGTC	1 cut(s)	1629
BmiI	GGNNCC	5 cut(s)	18, 587, 1667, 1934, 3164
BmrFI	CCNGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
BmrI	ACTGGG	3 cut(s)	2279, 2700, 3027
BmsI	GCATC	6 cut(s)	261, 514, 708, 874, 1476, 2255
BmtI	GCTAGC	2 cut(s)	78, 2246
BmuI	ACTGGG	3 cut(s)	2279, 2700, 3027
BpiI	GAAGAC	2 cut(s)	2075, 2914
BpmI	CTGGAG	2 cut(s)	537, 2435
Bpu1102I	GCTNAGC	3 cut(s)	1366, 2455, 2470
BpuEI	CTTGAG	2 cut(s)	803, 2831
Bsa29I	ATCGAT	1 cut(s)	1924
BsaAI	YACGTR	2 cut(s)	650, 3118
BsaBI	GATNNNNATC	1 cut(s)	2840
BsaHI	GRCGYC	2 cut(s)	586, 2159
BsaI	GGTCTC	1 cut(s)	940
BsaJI	CCNNGG	4 cut(s)	2338, 2614, 2778, 2859
BsaWI	WCCGGW	1 cut(s)	3142
BsaXI	ACNNNNNCTCC	4 cut(s)	749, 779, 2642, 2672
Bsc4I	CCNNNNNNNGG	4 cut(s)	466, 787, 1239, 1336
Bse1I	ACTGG	9 cut(s)	502, 554, 1573, 2274, 2338, 2695, 3006, 3022, 3132
Bse3DI	GCAATG	1 cut(s)	2943
Bse8I	GATNNNNATC	1 cut(s)	2840
BseBI	CCWGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
BseCI	ATCGAT	1 cut(s)	1924
BseDI	CCNNGG	4 cut(s)	2338, 2614, 2778, 2859
BseJI	GATNNNNATC	1 cut(s)	2840
BseLI	CCNNNNNNNGG	4 cut(s)	466, 787, 1239, 1336
BseMI	GCAATG	1 cut(s)	2943
BseMII	CTCAG	6 cut(s)	1252, 1380, 1765, 2469, 2484, 3189
BseNI	ACTGG	9 cut(s)	502, 554, 1573, 2274, 2338, 2695, 3006, 3022, 3132
BseRI	GAGGAG	2 cut(s)	540, 770
BseSI	GKGCMC	1 cut(s)	1935
BseYI	CCCAGC	1 cut(s)	2646
BsgI	GTGCAG	1 cut(s)	3070
Bsh1285I	CGRYCG	1 cut(s)	540
BshFI	GGCC	9 cut(s)	58, 317, 480, 1848, 2337, 2412, 3005, 3055, 3222
BshNI	GGYRCC	2 cut(s)	585, 1932
BshVI	ATCGAT	1 cut(s)	1924
BsiEI	CGRYCG	1 cut(s)	540
BsiHKAI	GWGCWC	3 cut(s)	703, 997, 2679
BsiSI	CCGG	2 cut(s)	1093, 3143
BslFI	GGGAC	3 cut(s)	2231, 2715, 3138
BslI	CCNNNNNNNGG	4 cut(s)	466, 787, 1239, 1336
BsmAI	GTCTC	5 cut(s)	752, 940, 1908, 2975, 3178
BsmFI	GGGAC	3 cut(s)	2231, 2715, 3138
BsnI	GGCC	9 cut(s)	58, 317, 480, 1848, 2337, 2412, 3005, 3055, 3222
Bso31I	GGTCTC	1 cut(s)	940
Bsp1286I	GDGCHC	4 cut(s)	703, 997, 1935, 2679
Bsp1720I	GCTNAGC	3 cut(s)	1366, 2455, 2470
BspACI	CCGC	5 cut(s)	142, 395, 865, 1887, 1951
BspANI	GGCC	9 cut(s)	58, 317, 480, 1848, 2337, 2412, 3005, 3055, 3222
BspCNI	CTCAG	6 cut(s)	1251, 1379, 1764, 2468, 2483, 3188
BspDI	ATCGAT	1 cut(s)	1924
BspLI	GGNNCC	5 cut(s)	18, 587, 1667, 1934, 3164
BspMAI	CTGCAG	3 cut(s)	962, 2241, 2685
BspMI	ACCTGC	3 cut(s)	541, 1760, 2688
BspOI	GCTAGC	2 cut(s)	78, 2246
BspPI	GGATC	6 cut(s)	251, 451, 1092, 1524, 1751, 3223
BspQI	GCTCTTC	2 cut(s)	1082, 1440
BspT107I	GGYRCC	2 cut(s)	585, 1932
BspTI	CTTAAG	3 cut(s)	209, 1481, 1655
BspTNI	GGTCTC	1 cut(s)	940
BsrBI	CCGCTC	1 cut(s)	865
BsrDI	GCAATG	1 cut(s)	2943
BsrI	ACTGG	9 cut(s)	502, 554, 1573, 2274, 2338, 2695, 3006, 3022, 3132
BssECI	CCNNGG	4 cut(s)	2338, 2614, 2778, 2859
BssNI	GRCGYC	2 cut(s)	586, 2159
BssSI	CACGAG	4 cut(s)	435, 1422, 1713, 1737
BssT1I	CCWWGG	1 cut(s)	2859
Bst2BI	CACGAG	4 cut(s)	435, 1422, 1713, 1737
Bst2UI	CCWGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
Bst4CI	ACNGT	8 cut(s)	607, 763, 967, 1066, 1937, 2017, 2706, 2977
Bst6I	CTCTTC	6 cut(s)	900, 1029, 1082, 1440, 1786, 2546
BstACI	GRCGYC	2 cut(s)	586, 2159
BstAFI	CTTAAG	3 cut(s)	209, 1481, 1655
BstAPI	GCANNNNNTGC	1 cut(s)	533
BstBAI	YACGTR	2 cut(s)	650, 3118
BstC8I	GCNNGC	7 cut(s)	72, 76, 1885, 2244, 2634, 3049, 3053
BstDSI	CCRYGG	2 cut(s)	2338, 2614
BstENI	CCTNNNNNAGG	2 cut(s)	1237, 1334
BstH2I	RGCGCY	1 cut(s)	589
BstHHI	GCGC	2 cut(s)	588, 2733
BstMAI	GTCTC	5 cut(s)	752, 940, 1908, 2975, 3178
BstMCI	CGRYCG	1 cut(s)	540
BstMWI	GCNNNNNNNGC	8 cut(s)	409, 486, 533, 1439, 1880, 2239, 2683, 3155
BstNI	CCWGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
BstNSI	RCATGY	2 cut(s)	206, 1957
BstSCI	CCNGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
BstSFI	CTRYAG	5 cut(s)	748, 958, 2237, 2377, 2681
BstSLI	GKGCMC	1 cut(s)	1935
BstV2I	GAAGAC	2 cut(s)	2075, 2914
BstX2I	RGATCY	3 cut(s)	456, 1097, 3228
BstXI	CCANNNNNNTGG	3 cut(s)	846, 1166, 2176
BstYI	RGATCY	3 cut(s)	456, 1097, 3228
Bsu15I	ATCGAT	1 cut(s)	1924
BsuI	GTATCC	1 cut(s)	2866
BsuRI	GGCC	9 cut(s)	58, 317, 480, 1848, 2337, 2412, 3005, 3055, 3222
BsuTUI	ATCGAT	1 cut(s)	1924
BtgI	CCRYGG	2 cut(s)	2338, 2614
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	7 cut(s)	59, 495, 1128, 2267, 2688, 2884, 2973
BveI	ACCTGC	3 cut(s)	541, 1760, 2688
Cac8I	GCNNGC	7 cut(s)	72, 76, 1885, 2244, 2634, 3049, 3053
CaiI	CAGNNNCTG	1 cut(s)	1127
CfoI	GCGC	2 cut(s)	588, 2733
ClaI	ATCGAT	1 cut(s)	1924
CseI	GACGC	1 cut(s)	914
CspCI	CAANNNNNGTGG	2 cut(s)	48, 83
DinI	GGCGCC	1 cut(s)	587
DraIII	CACNNNGTG	1 cut(s)	1525
DriI	GACNNNNNGTC	1 cut(s)	1629
EaeI	YGGCCR	3 cut(s)	56, 478, 2335
Eam1104I	CTCTTC	6 cut(s)	900, 1029, 1082, 1440, 1786, 2546
Eam1105I	GACNNNNNGTC	1 cut(s)	1629
EarI	CTCTTC	6 cut(s)	900, 1029, 1082, 1440, 1786, 2546
Ecl136II	GAGCTC	1 cut(s)	995
Eco130I	CCWWGG	1 cut(s)	2859
Eco147I	AGGCCT	2 cut(s)	2412, 3222
Eco24I	GRGCYC	1 cut(s)	997
Eco31I	GGTCTC	1 cut(s)	940
Eco32I	GATATC	1 cut(s)	3039
Eco53kI	GAGCTC	1 cut(s)	995
Eco57I	CTGAAG	6 cut(s)	12, 989, 1019, 1421, 2930, 3209
EcoICRI	GAGCTC	1 cut(s)	995
EcoNI	CCTNNNNNAGG	2 cut(s)	1237, 1334
EcoRII	CCWGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
EcoRV	GATATC	1 cut(s)	3039
EcoT14I	CCWWGG	1 cut(s)	2859
EcoT38I	GRGCYC	1 cut(s)	997
EgeI	GGCGCC	1 cut(s)	587
EheI	GGCGCC	1 cut(s)	587
ErhI	CCWWGG	1 cut(s)	2859
FalI	AAGNNNNNCTT	4 cut(s)	1464, 1496, 1564, 1596
FaqI	GGGAC	3 cut(s)	2231, 2715, 3138
FbaI	TGATCA	1 cut(s)	2172
FblI	GTMKAC	3 cut(s)	2019, 2038, 2760
FriOI	GRGCYC	1 cut(s)	997
FspBI	CTAG	8 cut(s)	75, 1043, 1115, 1647, 2091, 2243, 2610, 3098
GlaI	GCGC	2 cut(s)	587, 2732
GsaI	CCCAGC	1 cut(s)	2650
GsuI	CTGGAG	2 cut(s)	537, 2435
HaeII	RGCGCY	1 cut(s)	589
HaeIII	GGCC	9 cut(s)	58, 317, 480, 1848, 2337, 2412, 3005, 3055, 3222
HapII	CCGG	2 cut(s)	1093, 3143
HgaI	GACGC	1 cut(s)	914
HhaI	GCGC	2 cut(s)	588, 2733
Hin1I	GRCGYC	2 cut(s)	586, 2159
Hin6I	GCGC	2 cut(s)	586, 2731
HinP1I	GCGC	2 cut(s)	586, 2731
HincII	GTYRAC	3 cut(s)	603, 1324, 2157
HindII	GTYRAC	3 cut(s)	603, 1324, 2157
HindIII	AAGCTT	2 cut(s)	1001, 2995
HpaII	CCGG	2 cut(s)	1093, 3143
Hpy166II	GTNNAC	7 cut(s)	603, 1297, 1324, 2020, 2039, 2157, 2761
Hpy8I	GTNNAC	7 cut(s)	603, 1297, 1324, 2020, 2039, 2157, 2761
Hpy99I	CGWCG	2 cut(s)	993, 1197
HpyCH4III	ACNGT	8 cut(s)	607, 763, 967, 1066, 1937, 2017, 2706, 2977
HpyCH4IV	ACGT	4 cut(s)	649, 2159, 3117, 3235
HpyF10VI	GCNNNNNNNGC	8 cut(s)	409, 486, 533, 1439, 1880, 2239, 2683, 3155
HpySE526I	ACGT	4 cut(s)	649, 2159, 3117, 3235
Hsp92I	GRCGYC	2 cut(s)	586, 2159
HspAI	GCGC	2 cut(s)	586, 2731
KasI	GGCGCC	1 cut(s)	585
Ksp22I	TGATCA	1 cut(s)	2172
LguI	GCTCTTC	2 cut(s)	1082, 1440
LmnI	GCTCC	4 cut(s)	706, 862, 2416, 2674
LweI	GCATC	6 cut(s)	261, 514, 708, 874, 1476, 2255
MaeI	CTAG	8 cut(s)	75, 1043, 1115, 1647, 2091, 2243, 2610, 3098
MaeII	ACGT	4 cut(s)	649, 2159, 3117, 3235
MbiI	CCGCTC	1 cut(s)	865
MfeI	CAATTG	1 cut(s)	621
MflI	RGATCY	3 cut(s)	456, 1097, 3228
MhlI	GDGCHC	4 cut(s)	703, 997, 1935, 2679
MlsI	TGGCCA	2 cut(s)	58, 480
MluNI	TGGCCA	2 cut(s)	58, 480
Mly113I	GGCGCC	1 cut(s)	586
MlyI	GAGTC	7 cut(s)	119, 200, 623, 733, 2034, 2404, 2660
MmeI	TCCRAC	3 cut(s)	205, 402, 3256
Mox20I	TGGCCA	2 cut(s)	58, 480
MroXI	GAANNNNTTC	5 cut(s)	658, 833, 1434, 1576, 2915
MscI	TGGCCA	2 cut(s)	58, 480
MseI	TTAA	9 cut(s)	210, 261, 609, 870, 1134, 1224, 1482, 1509, 1656
MslI	CAYNNNNRTG	8 cut(s)	689, 1683, 1938, 2174, 2289, 2693, 2769, 3046
Msp20I	TGGCCA	2 cut(s)	58, 480
MspA1I	CMGCKG	4 cut(s)	922, 2236, 2474, 2893
MspCI	CTTAAG	3 cut(s)	209, 1481, 1655
MspI	CCGG	2 cut(s)	1093, 3143
MspR9I	CCNGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
MunI	CAATTG	1 cut(s)	621
MvaI	CCWGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
MwoI	GCNNNNNNNGC	8 cut(s)	409, 486, 533, 1439, 1880, 2239, 2683, 3155
NarI	GGCGCC	1 cut(s)	586
NheI	GCTAGC	2 cut(s)	74, 2242
NlaIV	GGNNCC	5 cut(s)	18, 587, 1667, 1934, 3164
NmuCI	GTSAC	8 cut(s)	430, 776, 1060, 1621, 1801, 2396, 2938, 2981
NspI	RCATGY	2 cut(s)	206, 1957
OliI	CACNNNNGTG	1 cut(s)	3046
PaqCI	CACCTGC	1 cut(s)	2688
PceI	AGGCCT	2 cut(s)	2412, 3222
PciI	ACATGT	1 cut(s)	202
PciSI	GCTCTTC	2 cut(s)	1082, 1440
PdmI	GAANNNNTTC	5 cut(s)	658, 833, 1434, 1576, 2915
PfeI	GAWTC	5 cut(s)	377, 1213, 1453, 1698, 2425
Ple19I	CGATCG	1 cut(s)	540
PleI	GAGTC	7 cut(s)	119, 199, 622, 733, 2034, 2403, 2659
PluTI	GGCGCC	1 cut(s)	589
PpsI	GAGTC	7 cut(s)	119, 199, 622, 733, 2034, 2403, 2659
Ppu21I	YACGTR	2 cut(s)	650, 3118
PscI	ACATGT	1 cut(s)	202
PsiI	TTATAA	1 cut(s)	2078
Psp124BI	GAGCTC	1 cut(s)	997
Psp6I	CCWGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
PspFI	CCCAGC	1 cut(s)	2646
PspGI	CCWGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
PspN4I	GGNNCC	5 cut(s)	18, 587, 1667, 1934, 3164
PstI	CTGCAG	3 cut(s)	962, 2241, 2685
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	3 cut(s)	456, 1097, 3228
PvuI	CGATCG	1 cut(s)	540
PvuII	CAGCTG	4 cut(s)	922, 2236, 2474, 2893
RseI	CAYNNNNRTG	8 cut(s)	689, 1683, 1938, 2174, 2289, 2693, 2769, 3046
SacI	GAGCTC	1 cut(s)	997
SapI	GCTCTTC	2 cut(s)	1082, 1440
SaqAI	TTAA	9 cut(s)	210, 261, 609, 870, 1134, 1224, 1482, 1509, 1656
ScaI	AGTACT	1 cut(s)	2952
SchI	GAGTC	7 cut(s)	119, 200, 623, 733, 2034, 2404, 2660
ScrFI	CCNGG	7 cut(s)	1337, 1362, 2414, 2656, 2779, 3190, 3206
SduI	GDGCHC	4 cut(s)	703, 997, 1935, 2679
SfaNI	GCATC	6 cut(s)	261, 514, 708, 874, 1476, 2255
SfcI	CTRYAG	5 cut(s)	748, 958, 2237, 2377, 2681
SfoI	GGCGCC	1 cut(s)	587
SmiMI	CAYNNNNRTG	8 cut(s)	689, 1683, 1938, 2174, 2289, 2693, 2769, 3046
SmlI	CTYRAG	5 cut(s)	209, 782, 1481, 1655, 2846
SmoI	CTYRAG	5 cut(s)	209, 782, 1481, 1655, 2846
SseBI	AGGCCT	2 cut(s)	2412, 3222
SsiI	CCGC	5 cut(s)	142, 395, 865, 1887, 1951
SspDI	GGCGCC	1 cut(s)	585
SspMI	CTAG	8 cut(s)	75, 1043, 1115, 1647, 2091, 2243, 2610, 3098
SstI	GAGCTC	1 cut(s)	997
StuI	AGGCCT	2 cut(s)	2412, 3222
StyD4I	CCNGG	7 cut(s)	1335, 1360, 2412, 2654, 2777, 3188, 3204
StyI	CCWWGG	1 cut(s)	2859
TaaI	ACNGT	8 cut(s)	607, 763, 967, 1066, 1937, 2017, 2706, 2977
TaiI	ACGT	4 cut(s)	652, 2162, 3120, 3238
TaqI	TCGA	2 cut(s)	1924, 3217
TaqII	GACCGA	1 cut(s)	1619
TatI	WGTACW	5 cut(s)	1815, 2322, 2385, 2719, 2950
TauI	GCSGC	1 cut(s)	868
TfiI	GAWTC	5 cut(s)	377, 1213, 1453, 1698, 2425
Tru1I	TTAA	9 cut(s)	210, 261, 609, 870, 1134, 1224, 1482, 1509, 1656
Tru9I	TTAA	9 cut(s)	210, 261, 609, 870, 1134, 1224, 1482, 1509, 1656
TscAI	CASTG	7 cut(s)	59, 502, 1128, 2274, 2695, 2884, 2980
TseFI	GTSAC	8 cut(s)	430, 776, 1060, 1621, 1801, 2396, 2938, 2981
Tsp45I	GTSAC	8 cut(s)	430, 776, 1060, 1621, 1801, 2396, 2938, 2981
TspGWI	ACGGA	2 cut(s)	1536, 2407
TspRI	CASTG	7 cut(s)	59, 502, 1128, 2274, 2695, 2884, 2980
Vha464I	CTTAAG	3 cut(s)	209, 1481, 1655
XagI	CCTNNNNNAGG	2 cut(s)	1237, 1334
XapI	RAATTY	4 cut(s)	341, 673, 1136, 1505
XceI	RCATGY	2 cut(s)	206, 1957
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1712
XmiI	GTMKAC	3 cut(s)	2019, 2038, 2760
XmnI	GAANNNNTTC	5 cut(s)	658, 833, 1434, 1576, 2915
XspI	CTAG	8 cut(s)	75, 1043, 1115, 1647, 2091, 2243, 2610, 3098
ZraI	GACGTC	1 cut(s)	2160
ZrmI	AGTACT	1 cut(s)	2952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.