Rh2DG313200

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
38511644 .. 38544067
32424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG313200.1

Sequence Viewer

Length: 1362 bp
ATGCAAGCATCAGACAAAGAAAATGCATCAAGTCTTTCTGCTCGAGTTAAAAAGTCTGATGCCAGGGAAATTACAAGCTTCTATCAGCAATATTATGATCACTATGTTAAAGCTGTTCAAGAGGAGCAGGTAGACAGGTCATCTGATTGTTTCTCTCTTGGTTGGCCCATGCGTGATGATGGGGATTTTTTTAAATCAACTCGTGACTTGGCACAGGGAAGAAAGGGCTCTAAAAGAAAATCTGGAAGCACAGGCAAATCATATTTTATTGAAACTCGCACATTTTGGCATATCTTTCGAAGTTTTGATCGAATGTGGACCTTTTATATACTGGCTCTACAGGCTATGCTCATTATTGCATTCAGCAAGGTTTCACCGCTGGATATATTTCAACAGGATGTCCTAAAAGATCTATCAAGTATTTTCATTACAGCAGCATTTCTTCGCGTCCTTCAGAGTATTCTGGATATGGTTTTGAACTTCCCTGGATATCACAGGTGTCGGTTCACAGATGTCCTGAGAAATATTCTGAAGATAGTTGTTAGTCTTGCATGGGCAGTCATTCTTCCACTTTTCTATGTGCATTCCTTCAATGATTCCCCTCAACAAATTGCAGATATACTGTCATTCCTTAAGAACATTCAAGGCGTTCCATCATTATATCTATTGGCTGTTGCAGTATATTTGCTTCCAAATTTACTGACAGCAGTTTTGTTCCTTTTCCCAATGCTCCGTCGTTTTATTGAAAATTCAGACTGGCATATCATCAGGTTCCTCTTGTGGTGGTCACAGCCAAGAATATATGTTGGAAGAGGAATGCATGAAAGTCAATTTGCCCTTCTAAAGTATACTTTTTTCTGGTTGCTACTTTTGGCTTGCAAGTTTACAGTTAGCTATTTTGTCCAGATAAAACCTCTGGTAGAGCCAACAGAAGACATAATGAAGATTCGTCGTATTAATTATGAGTGGCATGAATTTTTCCCTAATGCTGAACATAACTATGGAGCAGTTGTCTCACTCTGGGCACCTGTTATCATGGTTTATTTCATGGACACACAAATTTGGTATGCTATATTTCAAACATTATATGGAGGTATTGTTGGCGCCTTTGATCGCCTCGGAGAGATTCGTACTCTAGGCATGCTAAGATCCCGGTTCCAGTCTCTACCTGGTGCATTCAACACATATCTAGTGCCCTCGGATAAGTCAACAAAAAGGGGATTCTCTTTCTCAAAGAAATTTGCAGAGGCTTCAGCAAGTAGGAGAAGTGAAGCTGCAAAGTTTGCTCAGTTGTGGAATGAAGTGATATGTAGCTTTCGTGAGGAAGATCTCATCAGCGACAGGAAATGCTCTGGAACATAG

Protein Analysis

453

Amino Acids

52.74

Weight (kDa)

9.28

Isoelectric Point (pI)

52.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 118
AccB1I GGYRCC 2 cut(s) 1024, 1103
AccI GTMKAC 2 cut(s) 132, 848
AccII CGCG 1 cut(s) 447
AciI CCGC 1 cut(s) 377
AclWI GGATC 1 cut(s) 1143
AcsI RAATTY 5 cut(s) 694, 748, 974, 1059, 1238
AcuI CTGAAG 3 cut(s) 437, 551, 1236
AcyI GRCGYC 1 cut(s) 1104
AfaI GTAC 1 cut(s) 1132
AflII CTTAAG 1 cut(s) 632
AgsI TTSAA 9 cut(s) 119, 272, 392, 478, 592, 644, 746, 1079, 1180
AjnI CCWGG 3 cut(s) 62, 484, 1168
AluBI AGCT 5 cut(s) 78, 113, 894, 1274, 1314
AluI AGCT 5 cut(s) 78, 113, 894, 1274, 1314
Alw26I GTCTC 2 cut(s) 1018, 1167
AlwI GGATC 1 cut(s) 1143
Ama87I CYCGRG 1 cut(s) 42
AoxI GGCC 1 cut(s) 164
ApeKI GCWGC 2 cut(s) 434, 1274
ApoI RAATTY 5 cut(s) 694, 748, 974, 1059, 1238
ArsI GACNNNNNNTTYG 2 cut(s) 694, 726
AseI ATTAAT 1 cut(s) 957
AspLEI GCGC 1 cut(s) 1106
AspS9I GGNCC 2 cut(s) 165, 318
AsuC2I CCSGG 1 cut(s) 1153
AsuHPI GGTGA 1 cut(s) 366
AsuII TTCGAA 1 cut(s) 298
AvaI CYCGRG 1 cut(s) 42
AvaII GGWCC 1 cut(s) 318
BaeGI GKGCMC 2 cut(s) 1027, 1197
BanI GGYRCC 2 cut(s) 1024, 1103
BanII GRGCYC 1 cut(s) 230
BarI GAAGNNNNNNTAC 2 cut(s) 672, 704
BauI CACGAG 1 cut(s) 201
BbsI GAAGAC 1 cut(s) 939
BbvI GCAGC 2 cut(s) 446, 1261
BccI CCATC 2 cut(s) 173, 661
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 3 cut(s) 64, 486, 1170
BclI TGATCA 1 cut(s) 97
BcnI CCSGG 1 cut(s) 1153
BcoDI GTCTC 2 cut(s) 1018, 1167
BfaI CTAG 2 cut(s) 1136, 1190
BfmI CTRYAG 1 cut(s) 338
BfoI RGCGCY 1 cut(s) 1107
BfrI CTTAAG 1 cut(s) 632
BfuAI ACCTGC 1 cut(s) 118
BglII AGATCT 2 cut(s) 409, 1327
BisI GCNGC 2 cut(s) 435, 1275
BlsI GCNGC 2 cut(s) 436, 1276
Bme1390I CCNGG 4 cut(s) 64, 486, 1153, 1170
Bme18I GGWCC 1 cut(s) 318
BmeT110I CYCGRG 1 cut(s) 42
BmgT120I GGNCC 2 cut(s) 165, 318
BmiI GGNNCC 4 cut(s) 773, 1026, 1105, 1157
BmrFI CCNGG 4 cut(s) 64, 486, 1153, 1170
BmsI GCATC 3 cut(s) 17, 35, 49
BpiI GAAGAC 1 cut(s) 939
Bpu14I TTCGAA 1 cut(s) 298
BpuMI CCSGG 1 cut(s) 1153
BsaHI GRCGYC 1 cut(s) 1104
BsaJI CCNNGG 4 cut(s) 63, 484, 1117, 1197
BsaXI ACNNNNNCTCC 4 cut(s) 996, 1026, 1083, 1113
Bse1I ACTGG 3 cut(s) 336, 761, 1159
BseBI CCWGG 3 cut(s) 64, 486, 1170
BseDI CCNNGG 4 cut(s) 63, 484, 1117, 1197
BseGI GGATG 1 cut(s) 403
BseMII CTCAG 2 cut(s) 509, 1301
BseNI ACTGG 3 cut(s) 336, 761, 1159
BseRI GAGGAG 1 cut(s) 137
BseSI GKGCMC 2 cut(s) 1027, 1197
BseXI GCAGC 2 cut(s) 446, 1261
Bsh1236I CGCG 1 cut(s) 447
BshFI GGCC 1 cut(s) 166
BshNI GGYRCC 2 cut(s) 1024, 1103
BsiHKCI CYCGRG 1 cut(s) 42
BsiSI CCGG 1 cut(s) 1153
BsmAI GTCTC 2 cut(s) 1018, 1167
BsmI GAATGC 4 cut(s) 359, 583, 822, 1175
BsnI GGCC 1 cut(s) 166
BsoBI CYCGRG 1 cut(s) 42
Bsp119I TTCGAA 1 cut(s) 298
Bsp1286I GDGCHC 3 cut(s) 230, 1027, 1197
Bsp143I GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
BspACI CCGC 1 cut(s) 377
BspANI GGCC 1 cut(s) 166
BspCNI CTCAG 2 cut(s) 510, 1300
BspFNI CGCG 1 cut(s) 447
BspLI GGNNCC 4 cut(s) 773, 1026, 1105, 1157
BspMI ACCTGC 1 cut(s) 118
BspPI GGATC 1 cut(s) 1143
BspT104I TTCGAA 1 cut(s) 298
BspT107I GGYRCC 2 cut(s) 1024, 1103
BspTI CTTAAG 1 cut(s) 632
BsrI ACTGG 3 cut(s) 336, 761, 1159
BssECI CCNNGG 4 cut(s) 63, 484, 1117, 1197
BssMI GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
BssNAI GTATAC 1 cut(s) 849
BssNI GRCGYC 1 cut(s) 1104
BssSI CACGAG 1 cut(s) 201
Bst1107I GTATAC 1 cut(s) 849
Bst2BI CACGAG 1 cut(s) 201
Bst2UI CCWGG 3 cut(s) 64, 486, 1170
Bst4CI ACNGT 2 cut(s) 624, 889
Bst6I CTCTTC 1 cut(s) 805
BstACI GRCGYC 1 cut(s) 1104
BstAFI CTTAAG 1 cut(s) 632
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstBI TTCGAA 1 cut(s) 298
BstC8I GCNNGC 3 cut(s) 6, 877, 1142
BstDEI CTNAG 3 cut(s) 518, 1145, 1287
BstF5I GGATG 1 cut(s) 403
BstFNI CGCG 1 cut(s) 447
BstH2I RGCGCY 1 cut(s) 1107
BstHHI GCGC 1 cut(s) 1106
BstKTI GATC 6 cut(s) 100, 310, 412, 1114, 1151, 1330
BstMAI GTCTC 2 cut(s) 1018, 1167
BstMBI GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
BstMWI GCNNNNNNNGC 2 cut(s) 341, 1283
BstNI CCWGG 3 cut(s) 64, 486, 1170
BstNSI RCATGY 1 cut(s) 1144
BstSCI CCNGG 4 cut(s) 62, 484, 1151, 1168
BstSFI CTRYAG 1 cut(s) 338
BstSLI GKGCMC 2 cut(s) 1027, 1197
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 2 cut(s) 446, 1261
BstV2I GAAGAC 1 cut(s) 939
BstX2I RGATCY 3 cut(s) 409, 1148, 1327
BstYI RGATCY 3 cut(s) 409, 1148, 1327
BstZ17I GTATAC 1 cut(s) 849
BsuRI GGCC 1 cut(s) 166
BtsCI GGATG 1 cut(s) 403
BveI ACCTGC 1 cut(s) 118
Cac8I GCNNGC 3 cut(s) 6, 877, 1142
CfoI GCGC 1 cut(s) 1106
Cfr13I GGNCC 2 cut(s) 165, 318
CseI GACGC 1 cut(s) 436
CsiI ACCWGGT 1 cut(s) 1168
Csp6I GTAC 1 cut(s) 1131
CviAII CATG 7 cut(s) 169, 552, 821, 971, 1036, 1048, 1141
CviQI GTAC 1 cut(s) 1131
DdeI CTNAG 3 cut(s) 518, 1145, 1287
DinI GGCGCC 1 cut(s) 1105
DpnI GATC 6 cut(s) 99, 309, 411, 1113, 1150, 1329
DpnII GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
DraI TTTAAA 1 cut(s) 193
Eam1104I CTCTTC 1 cut(s) 805
EarI CTCTTC 1 cut(s) 805
Eco24I GRGCYC 1 cut(s) 230
Eco32I GATATC 1 cut(s) 491
Eco47I GGWCC 1 cut(s) 318
Eco57I CTGAAG 3 cut(s) 437, 551, 1236
Eco88I CYCGRG 1 cut(s) 42
EcoRII CCWGG 3 cut(s) 62, 484, 1168
EcoRV GATATC 1 cut(s) 491
EcoT22I ATGCAT 2 cut(s) 28, 822
EcoT38I GRGCYC 1 cut(s) 230
EgeI GGCGCC 1 cut(s) 1105
EheI GGCGCC 1 cut(s) 1105
FaeI CATG 7 cut(s) 172, 555, 824, 974, 1039, 1051, 1144
FatI CATG 7 cut(s) 168, 551, 820, 970, 1035, 1047, 1140
FbaI TGATCA 1 cut(s) 97
FblI GTMKAC 2 cut(s) 132, 848
Fnu4HI GCNGC 2 cut(s) 435, 1275
FokI GGATG 1 cut(s) 410
FriOI GRGCYC 1 cut(s) 230
Fsp4HI GCNGC 2 cut(s) 435, 1275
FspBI CTAG 2 cut(s) 1136, 1190
GlaI GCGC 1 cut(s) 1105
GluI GCNGC 2 cut(s) 435, 1275
HaeII RGCGCY 1 cut(s) 1107
HaeIII GGCC 1 cut(s) 166
HapII CCGG 1 cut(s) 1153
HgaI GACGC 1 cut(s) 436
HhaI GCGC 1 cut(s) 1106
Hin1I GRCGYC 1 cut(s) 1104
Hin1II CATG 7 cut(s) 172, 555, 824, 974, 1039, 1051, 1144
Hin6I GCGC 1 cut(s) 1104
HinP1I GCGC 1 cut(s) 1104
HincII GTYRAC 1 cut(s) 1209
HindII GTYRAC 1 cut(s) 1209
HindIII AAGCTT 1 cut(s) 76
HinfI GANTC 4 cut(s) 596, 946, 1126, 1221
HpaII CCGG 1 cut(s) 1153
HphI GGTGA 1 cut(s) 366
Hpy166II GTNNAC 6 cut(s) 133, 318, 507, 849, 885, 1209
Hpy188I TCNGA 8 cut(s) 13, 58, 145, 456, 531, 754, 1121, 1201
Hpy188III TCNNGA 8 cut(s) 119, 203, 243, 464, 517, 904, 1319, 1353
Hpy8I GTNNAC 6 cut(s) 133, 318, 507, 849, 885, 1209
Hpy99I CGWCG 2 cut(s) 738, 954
HpyAV CCTTC 3 cut(s) 461, 598, 848
HpyCH4III ACNGT 2 cut(s) 624, 889
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 1283
HpyF3I CTNAG 3 cut(s) 518, 1145, 1287
Hsp92I GRCGYC 1 cut(s) 1104
Hsp92II CATG 7 cut(s) 172, 555, 824, 974, 1039, 1051, 1144
HspAI GCGC 1 cut(s) 1104
KasI GGCGCC 1 cut(s) 1103
Ksp22I TGATCA 1 cut(s) 97
Kzo9I GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
LmnI GCTCC 3 cut(s) 124, 735, 1004
Lsp1109I GCAGC 2 cut(s) 446, 1261
LweI GCATC 3 cut(s) 17, 35, 49
MabI ACCWGGT 1 cut(s) 1168
MaeI CTAG 2 cut(s) 1136, 1190
MaeIII GTNAC 2 cut(s) 203, 786
MalI GATC 6 cut(s) 99, 309, 411, 1113, 1150, 1329
MboI GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
MboII GAAGA 8 cut(s) 231, 434, 544, 557, 822, 944, 955, 1337
MflI RGATCY 3 cut(s) 409, 1148, 1327
MhlI GDGCHC 3 cut(s) 230, 1027, 1197
MluCI AATT 9 cut(s) 69, 609, 694, 748, 830, 958, 974, 1059, 1238
Mly113I GGCGCC 1 cut(s) 1104
MmeI TCCRAC 1 cut(s) 787
Mph1103I ATGCAT 2 cut(s) 28, 822
MseI TTAA 5 cut(s) 48, 108, 192, 633, 957
MslI CAYNNNNRTG 1 cut(s) 999
MspA1I CMGCKG 1 cut(s) 379
MspCI CTTAAG 1 cut(s) 632
MspI CCGG 1 cut(s) 1153
MspR9I CCNGG 4 cut(s) 64, 486, 1153, 1170
Mva1269I GAATGC 4 cut(s) 359, 583, 822, 1175
MvaI CCWGG 3 cut(s) 64, 486, 1170
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 2 cut(s) 341, 1283
NarI GGCGCC 1 cut(s) 1104
NciI CCSGG 1 cut(s) 1153
NdeII GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
NlaIII CATG 7 cut(s) 172, 555, 824, 974, 1039, 1051, 1144
NlaIV GGNNCC 4 cut(s) 773, 1026, 1105, 1157
NmuCI GTSAC 2 cut(s) 203, 786
NsiI ATGCAT 2 cut(s) 28, 822
NspI RCATGY 1 cut(s) 1144
NspV TTCGAA 1 cut(s) 298
PaeI GCATGC 1 cut(s) 1144
PaeR7I CTCGAG 1 cut(s) 42
PctI GAATGC 4 cut(s) 359, 583, 822, 1175
PfeI GAWTC 4 cut(s) 596, 946, 1126, 1221
PkrI GCNGC 2 cut(s) 436, 1276
PluTI GGCGCC 1 cut(s) 1107
PshBI ATTAAT 1 cut(s) 957
Psp6I CCWGG 3 cut(s) 62, 484, 1168
PspGI CCWGG 3 cut(s) 62, 484, 1168
PspN4I GGNNCC 4 cut(s) 773, 1026, 1105, 1157
PspPI GGNCC 2 cut(s) 165, 318
PspXI VCTCGAGB 1 cut(s) 42
PsuI RGATCY 3 cut(s) 409, 1148, 1327
RsaI GTAC 1 cut(s) 1132
RsaNI GTAC 1 cut(s) 1131
RseI CAYNNNNRTG 1 cut(s) 999
SaqAI TTAA 5 cut(s) 48, 108, 192, 633, 957
SatI GCNGC 2 cut(s) 435, 1275
Sau3AI GATC 6 cut(s) 97, 307, 409, 1111, 1148, 1327
Sau96I GGNCC 2 cut(s) 165, 318
ScrFI CCNGG 4 cut(s) 64, 486, 1153, 1170
SduI GDGCHC 3 cut(s) 230, 1027, 1197
SexAI ACCWGGT 1 cut(s) 1168
SfaNI GCATC 3 cut(s) 17, 35, 49
SfcI CTRYAG 1 cut(s) 338
SfoI GGCGCC 1 cut(s) 1105
Sfr274I CTCGAG 1 cut(s) 42
SfuI TTCGAA 1 cut(s) 298
SinI GGWCC 1 cut(s) 318
SlaI CTCGAG 1 cut(s) 42
SmiMI CAYNNNNRTG 1 cut(s) 999
SmlI CTYRAG 2 cut(s) 42, 632
SmoI CTYRAG 2 cut(s) 42, 632
SphI GCATGC 1 cut(s) 1144
Sse9I AATT 9 cut(s) 69, 609, 694, 748, 830, 958, 974, 1059, 1238
SsiI CCGC 1 cut(s) 377
SspDI GGCGCC 1 cut(s) 1103
SspI AATATT 2 cut(s) 92, 526
SspMI CTAG 2 cut(s) 1136, 1190
StyD4I CCNGG 4 cut(s) 62, 484, 1151, 1168
TaaI ACNGT 2 cut(s) 624, 889
TaqI TCGA 3 cut(s) 43, 298, 310
TasI AATT 9 cut(s) 69, 609, 694, 748, 830, 958, 974, 1059, 1238
TfiI GAWTC 4 cut(s) 596, 946, 1126, 1221
Tru1I TTAA 5 cut(s) 48, 108, 192, 633, 957
Tru9I TTAA 5 cut(s) 48, 108, 192, 633, 957
TseFI GTSAC 2 cut(s) 203, 786
TseI GCWGC 2 cut(s) 434, 1274
Tsp45I GTSAC 2 cut(s) 203, 786
TspDTI ATGAA 6 cut(s) 415, 837, 956, 987, 1036, 1314
TspGWI ACGGA 1 cut(s) 722
Vha464I CTTAAG 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 318
VspI ATTAAT 1 cut(s) 957
XapI RAATTY 5 cut(s) 694, 748, 974, 1059, 1238
XceI RCATGY 1 cut(s) 1144
XcmI CCANNNNNNNNNTGG 1 cut(s) 1166
XhoI CTCGAG 1 cut(s) 42
XmiI GTMKAC 2 cut(s) 132, 848
XspI CTAG 2 cut(s) 1136, 1190
Zsp2I ATGCAT 2 cut(s) 28, 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.