DNA replication complex GINS protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80190 AT1G80190 AT1G80190 AT1G80190 AT1G80190 AT1G80190 |
| fragaria_vesca | FvH4_1g25440 FvH4_1g25440 FvH4_1g25440 FvH4_1g25440 FvH4_1g25440 FvH4_6g30230 |
| malus_domestica | MD17G1206800.v1.1 |
| prunus_persica | Prupe.3G081400_v2.0.a1 Prupe.3G081400_v2.0.a1 Prupe.3G081400_v2.0.a1 Prupe.3G081400_v2.0.a1 Prupe.3G081400_v2.0.a1 |
| pyrus_communis | pycom17g20960 |
| rosa_chinensis | RchiOBHm_Chr2g0123461 RchiOBHm_Chr2g0136471 |
| rosa_laevigata | RLG00000018757 RLG00000019534 |
| rosa_multiflora | Rmu_co8456461.1_g000001 Rmu_sc0001998.1_g000001 Rmu_sc0005876.1_g000002 Rmu_sc0038680.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00108260 Rroxscaffold_2G00120610 |
| rosa_rugosa | Rorug02G0246000 Rorug02G0330800 Rorug02G0330900 |
| rosa_samantha | Rh2AG304600 Rh2AG381800 Rh2BG312700 Rh2BG388500 Rh2CG291100 Rh2CG368200 Rh2DG328600 Rh2DG405000 |
| rosa_wichuraiana | Rw2G024410 Rw2G031210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 427 |
| AccB1I | GGYRCC | 1 cut(s) | 427 |
| AclWI | GGATC | 1 cut(s) | 434 |
| AcsI | RAATTY | 1 cut(s) | 511 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AfaI | GTAC | 4 cut(s) | 5, 260, 356, 429 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AluBI | AGCT | 4 cut(s) | 61, 127, 179, 562 |
| AluI | AGCT | 4 cut(s) | 61, 127, 179, 562 |
| Alw21I | GWGCWC | 1 cut(s) | 205 |
| Alw26I | GTCTC | 1 cut(s) | 309 |
| AlwI | GGATC | 1 cut(s) | 434 |
| AoxI | GGCC | 1 cut(s) | 55 |
| ApeKI | GCWGC | 2 cut(s) | 240, 559 |
| ApoI | RAATTY | 1 cut(s) | 511 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 367 |
| Asp718I | GGTACC | 1 cut(s) | 427 |
| AspS9I | GGNCC | 2 cut(s) | 55, 190 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 466 |
| AvaII | GGWCC | 1 cut(s) | 190 |
| BanI | GGYRCC | 1 cut(s) | 427 |
| Bbv12I | GWGCWC | 1 cut(s) | 205 |
| BbvI | GCAGC | 2 cut(s) | 227, 571 |
| BccI | CCATC | 1 cut(s) | 574 |
| BceAI | ACGGC | 1 cut(s) | 22 |
| BcoDI | GTCTC | 1 cut(s) | 309 |
| BfaI | CTAG | 2 cut(s) | 128, 407 |
| BisI | GCNGC | 2 cut(s) | 241, 560 |
| BlsI | GCNGC | 2 cut(s) | 242, 561 |
| Bme18I | GGWCC | 1 cut(s) | 190 |
| BmgT120I | GGNCC | 2 cut(s) | 55, 190 |
| BmiI | GGNNCC | 1 cut(s) | 429 |
| BmsI | GCATC | 3 cut(s) | 383, 519, 541 |
| BsaI | GGTCTC | 1 cut(s) | 309 |
| BseGI | GGATG | 1 cut(s) | 207 |
| BseMII | CTCAG | 3 cut(s) | 349, 357, 505 |
| BseXI | GCAGC | 2 cut(s) | 227, 571 |
| BshFI | GGCC | 1 cut(s) | 57 |
| BshNI | GGYRCC | 1 cut(s) | 427 |
| BsiHKAI | GWGCWC | 1 cut(s) | 205 |
| BsmAI | GTCTC | 1 cut(s) | 309 |
| BsnI | GGCC | 1 cut(s) | 57 |
| Bso31I | GGTCTC | 1 cut(s) | 309 |
| Bsp1286I | GDGCHC | 1 cut(s) | 205 |
| Bsp1407I | TGTACA | 1 cut(s) | 258 |
| Bsp143I | GATC | 1 cut(s) | 439 |
| BspANI | GGCC | 1 cut(s) | 57 |
| BspCNI | CTCAG | 3 cut(s) | 348, 356, 504 |
| BspHI | TCATGA | 1 cut(s) | 121 |
| BspLI | GGNNCC | 1 cut(s) | 429 |
| BspPI | GGATC | 1 cut(s) | 434 |
| BspT107I | GGYRCC | 1 cut(s) | 427 |
| BspTNI | GGTCTC | 1 cut(s) | 309 |
| BsrGI | TGTACA | 1 cut(s) | 258 |
| BssMI | GATC | 1 cut(s) | 439 |
| Bst6I | CTCTTC | 1 cut(s) | 321 |
| BstAUI | TGTACA | 1 cut(s) | 258 |
| BstC8I | GCNNGC | 3 cut(s) | 19, 59, 397 |
| BstDEI | CTNAG | 3 cut(s) | 335, 343, 491 |
| BstF5I | GGATG | 1 cut(s) | 207 |
| BstKTI | GATC | 1 cut(s) | 442 |
| BstMAI | GTCTC | 1 cut(s) | 309 |
| BstMBI | GATC | 1 cut(s) | 439 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 54, 237 |
| BstV1I | GCAGC | 2 cut(s) | 227, 571 |
| BstX2I | RGATCY | 1 cut(s) | 439 |
| BstYI | RGATCY | 1 cut(s) | 439 |
| BsuRI | GGCC | 1 cut(s) | 57 |
| BtsCI | GGATG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 1 cut(s) | 499 |
| Cac8I | GCNNGC | 3 cut(s) | 19, 59, 397 |
| CciI | TCATGA | 1 cut(s) | 121 |
| Cfr13I | GGNCC | 2 cut(s) | 55, 190 |
| Csp6I | GTAC | 4 cut(s) | 4, 259, 355, 428 |
| CviAII | CATG | 1 cut(s) | 122 |
| CviJI | RGCY | 5 cut(s) | 57, 61, 127, 179, 562 |
| CviKI_1 | RGCY | 5 cut(s) | 57, 61, 127, 179, 562 |
| CviQI | GTAC | 4 cut(s) | 4, 259, 355, 428 |
| DdeI | CTNAG | 3 cut(s) | 335, 343, 491 |
| DpnI | GATC | 1 cut(s) | 441 |
| DpnII | GATC | 1 cut(s) | 439 |
| Eam1104I | CTCTTC | 1 cut(s) | 321 |
| EarI | CTCTTC | 1 cut(s) | 321 |
| Eco31I | GGTCTC | 1 cut(s) | 309 |
| Eco47I | GGWCC | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| EcoT22I | ATGCAT | 1 cut(s) | 534 |
| FaeI | CATG | 1 cut(s) | 125 |
| FaiI | YATR | 6 cut(s) | 123, 198, 253, 390, 392, 425 |
| FatI | CATG | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 2 cut(s) | 241, 560 |
| FokI | GGATG | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 2 cut(s) | 241, 560 |
| FspBI | CTAG | 2 cut(s) | 128, 407 |
| GluI | GCNGC | 2 cut(s) | 241, 560 |
| HaeIII | GGCC | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 125 |
| HinfI | GANTC | 1 cut(s) | 459 |
| HphI | GGTGA | 2 cut(s) | 40, 466 |
| Hpy166II | GTNNAC | 2 cut(s) | 80, 110 |
| Hpy188I | TCNGA | 3 cut(s) | 288, 346, 381 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 314 |
| Hpy8I | GTNNAC | 2 cut(s) | 80, 110 |
| HpyAV | CCTTC | 1 cut(s) | 289 |
| HpyCH4V | TGCA | 1 cut(s) | 532 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 54, 237 |
| HpyF3I | CTNAG | 3 cut(s) | 335, 343, 491 |
| Hsp92II | CATG | 1 cut(s) | 125 |
| KpnI | GGTACC | 1 cut(s) | 431 |
| Kzo9I | GATC | 1 cut(s) | 439 |
| LmnI | GCTCC | 1 cut(s) | 200 |
| LpnPI | CCDG | 4 cut(s) | 58, 71, 327, 557 |
| Lsp1109I | GCAGC | 2 cut(s) | 227, 571 |
| LweI | GCATC | 3 cut(s) | 383, 519, 541 |
| MaeI | CTAG | 2 cut(s) | 128, 407 |
| MaeIII | GTNAC | 2 cut(s) | 338, 521 |
| MalI | GATC | 1 cut(s) | 441 |
| MboI | GATC | 1 cut(s) | 439 |
| MboII | GAAGA | 4 cut(s) | 113, 164, 329, 338 |
| MfeI | CAATTG | 1 cut(s) | 23 |
| MflI | RGATCY | 1 cut(s) | 439 |
| MhlI | GDGCHC | 1 cut(s) | 205 |
| MluCI | AATT | 3 cut(s) | 23, 309, 511 |
| MlyI | GAGTC | 1 cut(s) | 468 |
| MnlI | CCTC | 3 cut(s) | 181, 227, 577 |
| Mph1103I | ATGCAT | 1 cut(s) | 534 |
| MroXI | GAANNNNTTC | 1 cut(s) | 367 |
| MseI | TTAA | 3 cut(s) | 164, 245, 540 |
| MslI | CAYNNNNRTG | 2 cut(s) | 120, 452 |
| MunI | CAATTG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 54, 237 |
| NdeII | GATC | 1 cut(s) | 439 |
| NlaIII | CATG | 1 cut(s) | 125 |
| NlaIV | GGNNCC | 1 cut(s) | 429 |
| NmeAIII | GCCGAG | 1 cut(s) | 580 |
| NmuCI | GTSAC | 1 cut(s) | 521 |
| NsiI | ATGCAT | 1 cut(s) | 534 |
| PagI | TCATGA | 1 cut(s) | 121 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 1 cut(s) | 367 |
| PkrI | GCNGC | 2 cut(s) | 242, 561 |
| PleI | GAGTC | 1 cut(s) | 467 |
| PpsI | GAGTC | 1 cut(s) | 467 |
| PspN4I | GGNNCC | 1 cut(s) | 429 |
| PspPI | GGNCC | 2 cut(s) | 55, 190 |
| PsuI | RGATCY | 1 cut(s) | 439 |
| RsaI | GTAC | 4 cut(s) | 5, 260, 356, 429 |
| RsaNI | GTAC | 4 cut(s) | 4, 259, 355, 428 |
| RseI | CAYNNNNRTG | 2 cut(s) | 120, 452 |
| SaqAI | TTAA | 3 cut(s) | 164, 245, 540 |
| SatI | GCNGC | 2 cut(s) | 241, 560 |
| Sau3AI | GATC | 1 cut(s) | 439 |
| Sau96I | GGNCC | 2 cut(s) | 55, 190 |
| SchI | GAGTC | 1 cut(s) | 468 |
| SduI | GDGCHC | 1 cut(s) | 205 |
| SetI | ASST | 7 cut(s) | 63, 129, 181, 219, 300, 456, 564 |
| SfaNI | GCATC | 3 cut(s) | 383, 519, 541 |
| SinI | GGWCC | 1 cut(s) | 190 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 120, 452 |
| Sse9I | AATT | 3 cut(s) | 23, 309, 511 |
| SspI | AATATT | 1 cut(s) | 276 |
| SspMI | CTAG | 2 cut(s) | 128, 407 |
| TaqI | TCGA | 4 cut(s) | 87, 171, 324, 527 |
| TasI | AATT | 3 cut(s) | 23, 309, 511 |
| TatI | WGTACW | 2 cut(s) | 258, 354 |
| Tru1I | TTAA | 3 cut(s) | 164, 245, 540 |
| Tru9I | TTAA | 3 cut(s) | 164, 245, 540 |
| TscAI | CASTG | 1 cut(s) | 499 |
| TseFI | GTSAC | 1 cut(s) | 521 |
| TseI | GCWGC | 2 cut(s) | 240, 559 |
| Tsp45I | GTSAC | 1 cut(s) | 521 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| TspRI | CASTG | 1 cut(s) | 499 |
| VpaK11BI | GGWCC | 1 cut(s) | 190 |
| XapI | RAATTY | 1 cut(s) | 511 |
| XmnI | GAANNNNTTC | 1 cut(s) | 367 |
| XspI | CTAG | 2 cut(s) | 128, 407 |
| Zsp2I | ATGCAT | 1 cut(s) | 534 |