Serine threonine-protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35075 |
| fragaria_vesca | FvH4_2g07370 FvH4_2g07370 |
| malus_domestica | MD10G1086500.v1.1 MD14G1180200.v1.1 |
| prunus_persica | Prupe.8G112500_v2.0.a1 |
| pyrus_communis | pycom10g06870 |
| rosa_chinensis | RchiOBHm_Chr6g0260251 RchiOBHm_Chr6g0260261 RchiOBHm_Chr6g0260791 |
| rosa_laevigata | RLG00000014485 |
| rosa_multiflora | Rmu_co8055024.1_g000001 Rmu_co8166074.1_g000001 Rmu_sc0014629.1_g000010 Rmu_sc0023276.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00207390 |
| rosa_rugosa | Rorug05G0592900 |
| rosa_samantha | Rh6AG109300 Rh6AG110500 Rh6AG112300 Rh6BG106200 Rh6CG097700 Rh6CG098100 Rh6CG102000 Rh6CG102200 Rh6CG103000 Rh6DG091700 Rh6DG093600 Rh6DG093900 Rh6DG094300 |
| rosa_wichuraiana | Rw6G009500 Rw6G009940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 674, 8645, 9734, 11105 |
| Acc16I | TGCGCA | 1 cut(s) | 5237 |
| Acc36I | ACCTGC | 4 cut(s) | 1703, 2286, 4859, 5155 |
| Acc65I | GGTACC | 1 cut(s) | 6764 |
| AccB1I | GGYRCC | 4 cut(s) | 640, 2377, 3667, 6764 |
| AccB7I | CCANNNNNTGG | 7 cut(s) | 1105, 3222, 4164, 5882, 6191, 6217, 8216 |
| AccI | GTMKAC | 6 cut(s) | 2787, 4451, 7013, 8128, 10904, 11289 |
| AccII | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| AccIII | TCCGGA | 1 cut(s) | 807 |
| AcoI | YGGCCR | 4 cut(s) | 1528, 4960, 6034, 10348 |
| AcyI | GRCGYC | 1 cut(s) | 5767 |
| AflII | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| AflIII | ACRYGT | 4 cut(s) | 2038, 6045, 11134, 11304 |
| AgeI | ACCGGT | 1 cut(s) | 345 |
| AhlI | ACTAGT | 1 cut(s) | 11282 |
| AjiI | CACGTC | 3 cut(s) | 2444, 5977, 11033 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 2391, 2423, 5343, 5375, 6777, 6809 |
| AleI | CACNNNNGTG | 1 cut(s) | 5486 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3925, 3957 |
| Alw21I | GWGCWC | 9 cut(s) | 2731, 2976, 3033, 3579, 5349, 7077, 7788, 8025, 10643 |
| Alw44I | GTGCAC | 1 cut(s) | 7784 |
| AlwNI | CAGNNNCTG | 8 cut(s) | 1695, 5909, 7988, 8164, 8894, 10553, 10730, 11016 |
| Ama87I | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| Aor13HI | TCCGGA | 1 cut(s) | 807 |
| ApaI | GGGCCC | 3 cut(s) | 3216, 4789, 9217 |
| ApaLI | GTGCAC | 1 cut(s) | 7784 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 550, 582, 1882, 1914, 2018, 2050, 10465, 10497 |
| AseI | ATTAAT | 1 cut(s) | 3486 |
| AsiGI | ACCGGT | 1 cut(s) | 345 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 3937, 8298, 9081, 9225, 9634 |
| Asp718I | GGTACC | 1 cut(s) | 6764 |
| AspA2I | CCTAGG | 1 cut(s) | 2608 |
| AsuNHI | GCTAGC | 2 cut(s) | 31, 9125 |
| AvaI | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| AvrII | CCTAGG | 1 cut(s) | 2608 |
| BaeGI | GKGCMC | 6 cut(s) | 3216, 3904, 4789, 7788, 8587, 9217 |
| BalI | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| BamHI | GGATCC | 1 cut(s) | 2394 |
| BanI | GGYRCC | 4 cut(s) | 640, 2377, 3667, 6764 |
| BanII | GRGCYC | 8 cut(s) | 2976, 3216, 3579, 4789, 5349, 7077, 9217, 10446 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 8044, 8076, 9544, 9576 |
| BauI | CACGAG | 5 cut(s) | 1310, 6960, 7185, 9771, 11121 |
| Bbv12I | GWGCWC | 9 cut(s) | 2731, 2976, 3033, 3579, 5349, 7077, 7788, 8025, 10643 |
| BceAI | ACGGC | 8 cut(s) | 104, 125, 352, 2417, 2609, 3098, 4016, 7707 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 452, 486, 3407, 3441, 3559, 3593, 6956, 6990 |
| BciVI | GTATCC | 2 cut(s) | 7480, 8895 |
| BclI | TGATCA | 3 cut(s) | 3649, 7102, 10774 |
| BcuI | ACTAGT | 1 cut(s) | 11282 |
| BfoI | RGCGCY | 1 cut(s) | 365 |
| BfrI | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| BfuAI | ACCTGC | 4 cut(s) | 1703, 2286, 4859, 5155 |
| BfuI | GTATCC | 2 cut(s) | 7480, 8895 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 8211 |
| BglII | AGATCT | 8 cut(s) | 4383, 4656, 5473, 6070, 7112, 9801, 10162, 10570 |
| BlnI | CCTAGG | 1 cut(s) | 2608 |
| BlpI | GCTNAGC | 2 cut(s) | 5459, 7461 |
| BmcAI | AGTACT | 3 cut(s) | 846, 4228, 7739 |
| BmeT110I | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| BmgBI | CACGTC | 3 cut(s) | 2444, 5977, 11033 |
| BmrI | ACTGGG | 2 cut(s) | 715, 3240 |
| BmtI | GCTAGC | 2 cut(s) | 35, 9129 |
| BmuI | ACTGGG | 2 cut(s) | 715, 3240 |
| BoxI | GACNNNNGTC | 4 cut(s) | 783, 5037, 5922, 7831 |
| BpmI | CTGGAG | 7 cut(s) | 1382, 3431, 3722, 6309, 9368, 9777, 10842 |
| Bpu10I | CCTNAGC | 5 cut(s) | 2975, 5223, 5794, 7416, 9467 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 5459, 7461 |
| BsaAI | YACGTR | 1 cut(s) | 3353 |
| BsaBI | GATNNNNATC | 3 cut(s) | 4388, 6517, 10690 |
| BsaHI | GRCGYC | 1 cut(s) | 5767 |
| BsaI | GGTCTC | 1 cut(s) | 9795 |
| BsaWI | WCCGGW | 4 cut(s) | 345, 807, 2257, 9786 |
| Bse118I | RCCGGY | 1 cut(s) | 345 |
| Bse8I | GATNNNNATC | 3 cut(s) | 4388, 6517, 10690 |
| BseAI | TCCGGA | 1 cut(s) | 807 |
| BseJI | GATNNNNATC | 3 cut(s) | 4388, 6517, 10690 |
| BseSI | GKGCMC | 6 cut(s) | 3216, 3904, 4789, 7788, 8587, 9217 |
| BseYI | CCCAGC | 7 cut(s) | 357, 2316, 3440, 7391, 9808, 10490, 10589 |
| BsgI | GTGCAG | 6 cut(s) | 1226, 5423, 5508, 6986, 7590, 9642 |
| Bsh1236I | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| Bsh1285I | CGRYCG | 1 cut(s) | 462 |
| BshNI | GGYRCC | 4 cut(s) | 640, 2377, 3667, 6764 |
| BshTI | ACCGGT | 1 cut(s) | 345 |
| BsiEI | CGRYCG | 1 cut(s) | 462 |
| BsiHKAI | GWGCWC | 9 cut(s) | 2731, 2976, 3033, 3579, 5349, 7077, 7788, 8025, 10643 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| BsiSI | CCGG | 7 cut(s) | 346, 390, 644, 808, 2258, 5735, 9787 |
| BslFI | GGGAC | 7 cut(s) | 412, 2239, 4936, 6866, 6965, 7624, 7694 |
| BsmFI | GGGAC | 7 cut(s) | 412, 2239, 4936, 6866, 6965, 7624, 7694 |
| BsmI | GAATGC | 7 cut(s) | 2652, 2914, 5323, 6127, 8674, 9862, 10127 |
| Bso31I | GGTCTC | 1 cut(s) | 9795 |
| BsoBI | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| Bsp120I | GGGCCC | 3 cut(s) | 3212, 4785, 9213 |
| Bsp13I | TCCGGA | 1 cut(s) | 807 |
| Bsp1407I | TGTACA | 2 cut(s) | 2080, 10174 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 5459, 7461 |
| Bsp19I | CCATGG | 3 cut(s) | 4899, 6564, 11324 |
| BspEI | TCCGGA | 1 cut(s) | 807 |
| BspFNI | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| BspHI | TCATGA | 9 cut(s) | 2215, 3112, 4185, 4585, 5665, 6424, 6886, 6997, 9670 |
| BspMAI | CTGCAG | 6 cut(s) | 852, 2070, 2283, 3064, 10204, 10715 |
| BspMI | ACCTGC | 4 cut(s) | 1703, 2286, 4859, 5155 |
| BspOI | GCTAGC | 2 cut(s) | 35, 9129 |
| BspQI | GCTCTTC | 2 cut(s) | 8103, 9041 |
| BspT107I | GGYRCC | 4 cut(s) | 640, 2377, 3667, 6764 |
| BspTI | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| BspTNI | GGTCTC | 1 cut(s) | 9795 |
| BsrFI | RCCGGY | 1 cut(s) | 345 |
| BsrGI | TGTACA | 2 cut(s) | 2080, 10174 |
| BssAI | RCCGGY | 1 cut(s) | 345 |
| BssNAI | GTATAC | 3 cut(s) | 2788, 8129, 10905 |
| BssNI | GRCGYC | 1 cut(s) | 5767 |
| BssSI | CACGAG | 5 cut(s) | 1310, 6960, 7185, 9771, 11121 |
| Bst1107I | GTATAC | 3 cut(s) | 2788, 8129, 10905 |
| Bst2BI | CACGAG | 5 cut(s) | 1310, 6960, 7185, 9771, 11121 |
| BstACI | GRCGYC | 1 cut(s) | 5767 |
| BstAFI | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 263, 3497, 5233, 5531, 6103, 10475 |
| BstAUI | TGTACA | 2 cut(s) | 2080, 10174 |
| BstBAI | YACGTR | 1 cut(s) | 3353 |
| BstDSI | CCRYGG | 4 cut(s) | 4899, 5174, 6564, 11324 |
| BstEII | GGTNACC | 1 cut(s) | 5185 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 194, 10232 |
| BstFNI | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| BstH2I | RGCGCY | 1 cut(s) | 365 |
| BstMCI | CGRYCG | 1 cut(s) | 462 |
| BstPAI | GACNNNNGTC | 4 cut(s) | 783, 5037, 5922, 7831 |
| BstPI | GGTNACC | 1 cut(s) | 5185 |
| BstSLI | GKGCMC | 6 cut(s) | 3216, 3904, 4789, 7788, 8587, 9217 |
| BstUI | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| BstXI | CCANNNNNNTGG | 7 cut(s) | 409, 548, 1139, 1406, 2053, 6571, 6587 |
| BstZ17I | GTATAC | 3 cut(s) | 2788, 8129, 10905 |
| BsuI | GTATCC | 2 cut(s) | 7480, 8895 |
| BtgI | CCRYGG | 4 cut(s) | 4899, 5174, 6564, 11324 |
| BtrI | CACGTC | 3 cut(s) | 2444, 5977, 11033 |
| BtsI | GCAGTG | 4 cut(s) | 855, 2288, 3577, 3769 |
| BveI | ACCTGC | 4 cut(s) | 1703, 2286, 4859, 5155 |
| CaiI | CAGNNNCTG | 8 cut(s) | 1695, 5909, 7988, 8164, 8894, 10553, 10730, 11016 |
| CciI | TCATGA | 9 cut(s) | 2215, 3112, 4185, 4585, 5665, 6424, 6886, 6997, 9670 |
| Cfr10I | RCCGGY | 1 cut(s) | 345 |
| CseI | GACGC | 5 cut(s) | 288, 5756, 6902, 6967, 8516 |
| CspAI | ACCGGT | 1 cut(s) | 345 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2593, 2628 |
| DraI | TTTAAA | 7 cut(s) | 1149, 3000, 4029, 4233, 7977, 8248, 10377 |
| EaeI | YGGCCR | 4 cut(s) | 1528, 4960, 6034, 10348 |
| EciI | GGCGGA | 3 cut(s) | 67, 169, 6704 |
| Ecl136II | GAGCTC | 4 cut(s) | 2974, 3577, 5347, 7075 |
| Eco147I | AGGCCT | 2 cut(s) | 9, 7232 |
| Eco24I | GRGCYC | 8 cut(s) | 2976, 3216, 3579, 4789, 5349, 7077, 9217, 10446 |
| Eco31I | GGTCTC | 1 cut(s) | 9795 |
| Eco53kI | GAGCTC | 4 cut(s) | 2974, 3577, 5347, 7075 |
| Eco88I | CYCGRG | 3 cut(s) | 2450, 4376, 7209 |
| Eco91I | GGTNACC | 1 cut(s) | 5185 |
| EcoICRI | GAGCTC | 4 cut(s) | 2974, 3577, 5347, 7075 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 194, 10232 |
| EcoO109I | RGGNCCY | 8 cut(s) | 2431, 4409, 4785, 4786, 6853, 9213, 9214, 10144 |
| EcoO65I | GGTNACC | 1 cut(s) | 5185 |
| EcoRI | GAATTC | 2 cut(s) | 9245, 9654 |
| EcoT22I | ATGCAT | 4 cut(s) | 2206, 4128, 5764, 9375 |
| EcoT38I | GRGCYC | 8 cut(s) | 2976, 3216, 3579, 4789, 5349, 7077, 9217, 10446 |
| FaqI | GGGAC | 7 cut(s) | 412, 2239, 4936, 6866, 6965, 7624, 7694 |
| FauI | CCCGC | 2 cut(s) | 4001, 4672 |
| FauNDI | CATATG | 3 cut(s) | 259, 2797, 3853 |
| FbaI | TGATCA | 3 cut(s) | 3649, 7102, 10774 |
| FblI | GTMKAC | 6 cut(s) | 2787, 4451, 7013, 8128, 10904, 11289 |
| FriOI | GRGCYC | 8 cut(s) | 2976, 3216, 3579, 4789, 5349, 7077, 9217, 10446 |
| FspI | TGCGCA | 1 cut(s) | 5237 |
| GsaI | CCCAGC | 7 cut(s) | 361, 2320, 3444, 7395, 9812, 10494, 10593 |
| GsuI | CTGGAG | 7 cut(s) | 1382, 3431, 3722, 6309, 9368, 9777, 10842 |
| HaeII | RGCGCY | 1 cut(s) | 365 |
| HapII | CCGG | 7 cut(s) | 346, 390, 644, 808, 2258, 5735, 9787 |
| HgaI | GACGC | 5 cut(s) | 288, 5756, 6902, 6967, 8516 |
| Hin1I | GRCGYC | 1 cut(s) | 5767 |
| HincII | GTYRAC | 6 cut(s) | 124, 343, 2447, 5032, 10458, 10944 |
| HindII | GTYRAC | 6 cut(s) | 124, 343, 2447, 5032, 10458, 10944 |
| HindIII | AAGCTT | 8 cut(s) | 7340, 8012, 8574, 8909, 8917, 9056, 9540, 9917 |
| HpaII | CCGG | 7 cut(s) | 346, 390, 644, 808, 2258, 5735, 9787 |
| Hpy99I | CGWCG | 6 cut(s) | 53, 95, 98, 304, 5631, 5978 |
| HpyCH4IV | ACGT | 9 cut(s) | 780, 2443, 2658, 3158, 3352, 5626, 5976, 6819, 11032 |
| HpySE526I | ACGT | 9 cut(s) | 780, 2443, 2658, 3158, 3352, 5626, 5976, 6819, 11032 |
| Hsp92I | GRCGYC | 1 cut(s) | 5767 |
| KflI | GGGWCCC | 1 cut(s) | 6853 |
| Kpn2I | TCCGGA | 1 cut(s) | 807 |
| KpnI | GGTACC | 1 cut(s) | 6768 |
| Ksp22I | TGATCA | 3 cut(s) | 3649, 7102, 10774 |
| LguI | GCTCTTC | 2 cut(s) | 8103, 9041 |
| MaeII | ACGT | 9 cut(s) | 780, 2443, 2658, 3158, 3352, 5626, 5976, 6819, 11032 |
| MfeI | CAATTG | 6 cut(s) | 3582, 5195, 5846, 6900, 8385, 8796 |
| MlsI | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| MluNI | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| Mox20I | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| Mph1103I | ATGCAT | 4 cut(s) | 2206, 4128, 5764, 9375 |
| MroI | TCCGGA | 1 cut(s) | 807 |
| MroXI | GAANNNNTTC | 5 cut(s) | 3937, 8298, 9081, 9225, 9634 |
| MscI | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| Msp20I | TGGCCA | 4 cut(s) | 1530, 4962, 6036, 10350 |
| MspCI | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| MspI | CCGG | 7 cut(s) | 346, 390, 644, 808, 2258, 5735, 9787 |
| MssI | GTTTAAAC | 1 cut(s) | 4029 |
| MunI | CAATTG | 6 cut(s) | 3582, 5195, 5846, 6900, 8385, 8796 |
| Mva1269I | GAATGC | 7 cut(s) | 2652, 2914, 5323, 6127, 8674, 9862, 10127 |
| MvnI | CGCG | 5 cut(s) | 38, 53, 138, 6978, 9900 |
| NcoI | CCATGG | 3 cut(s) | 4899, 6564, 11324 |
| NdeI | CATATG | 3 cut(s) | 259, 2797, 3853 |
| NheI | GCTAGC | 2 cut(s) | 31, 9125 |
| NsbI | TGCGCA | 1 cut(s) | 5237 |
| NsiI | ATGCAT | 4 cut(s) | 2206, 4128, 5764, 9375 |
| OliI | CACNNNNGTG | 1 cut(s) | 5486 |
| PaeI | GCATGC | 4 cut(s) | 2208, 3440, 4248, 8738 |
| PaeR7I | CTCGAG | 2 cut(s) | 4376, 7209 |
| PagI | TCATGA | 9 cut(s) | 2215, 3112, 4185, 4585, 5665, 6424, 6886, 6997, 9670 |
| PasI | CCCWGGG | 2 cut(s) | 196, 1393 |
| PceI | AGGCCT | 2 cut(s) | 9, 7232 |
| PciI | ACATGT | 4 cut(s) | 2038, 6045, 11134, 11304 |
| PciSI | GCTCTTC | 2 cut(s) | 8103, 9041 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3928 |
| PctI | GAATGC | 7 cut(s) | 2652, 2914, 5323, 6127, 8674, 9862, 10127 |
| PdmI | GAANNNNTTC | 5 cut(s) | 3937, 8298, 9081, 9225, 9634 |
| PflMI | CCANNNNNTGG | 7 cut(s) | 1105, 3222, 4164, 5882, 6191, 6217, 8216 |
| PfoI | TCCNGGA | 2 cut(s) | 4481, 9793 |
| PinAI | ACCGGT | 1 cut(s) | 345 |
| Ple19I | CGATCG | 1 cut(s) | 462 |
| PmeI | GTTTAAAC | 1 cut(s) | 4029 |
| Ppu21I | YACGTR | 1 cut(s) | 3353 |
| PpuMI | RGGWCCY | 4 cut(s) | 2431, 4409, 6853, 10144 |
| PscI | ACATGT | 4 cut(s) | 2038, 6045, 11134, 11304 |
| PshAI | GACNNNNGTC | 4 cut(s) | 783, 5037, 5922, 7831 |
| PshBI | ATTAAT | 1 cut(s) | 3486 |
| PsiI | TTATAA | 4 cut(s) | 674, 8645, 9734, 11105 |
| Psp124BI | GAGCTC | 4 cut(s) | 2976, 3579, 5349, 7077 |
| Psp5II | RGGWCCY | 4 cut(s) | 2431, 4409, 6853, 10144 |
| PspEI | GGTNACC | 1 cut(s) | 5185 |
| PspFI | CCCAGC | 7 cut(s) | 357, 2316, 3440, 7391, 9808, 10490, 10589 |
| PspOMI | GGGCCC | 3 cut(s) | 3212, 4785, 9213 |
| PspPPI | RGGWCCY | 4 cut(s) | 2431, 4409, 6853, 10144 |
| PstI | CTGCAG | 6 cut(s) | 852, 2070, 2283, 3064, 10204, 10715 |
| PstNI | CAGNNNCTG | 8 cut(s) | 1695, 5909, 7988, 8164, 8894, 10553, 10730, 11016 |
| PvuI | CGATCG | 1 cut(s) | 462 |
| PvuII | CAGCTG | 9 cut(s) | 3749, 5407, 7025, 7139, 7505, 7985, 9566, 9626, 10862 |
| SacI | GAGCTC | 4 cut(s) | 2976, 3579, 5349, 7077 |
| SapI | GCTCTTC | 2 cut(s) | 8103, 9041 |
| ScaI | AGTACT | 3 cut(s) | 846, 4228, 7739 |
| Sfr274I | CTCGAG | 2 cut(s) | 4376, 7209 |
| SlaI | CTCGAG | 2 cut(s) | 4376, 7209 |
| SpeI | ACTAGT | 1 cut(s) | 11282 |
| SphI | GCATGC | 4 cut(s) | 2208, 3440, 4248, 8738 |
| SseBI | AGGCCT | 2 cut(s) | 9, 7232 |
| SspI | AATATT | 4 cut(s) | 382, 4765, 4870, 5542 |
| SstI | GAGCTC | 4 cut(s) | 2976, 3579, 5349, 7077 |
| StuI | AGGCCT | 2 cut(s) | 9, 7232 |
| TaiI | ACGT | 9 cut(s) | 783, 2446, 2661, 3161, 3355, 5629, 5979, 6822, 11035 |
| TaqII | GACCGA | 1 cut(s) | 2820 |
| TauI | GCSGC | 5 cut(s) | 38, 119, 2211, 3727, 9691 |
| TspGWI | ACGGA | 4 cut(s) | 37, 682, 1829, 6065 |
| Van91I | CCANNNNNTGG | 7 cut(s) | 1105, 3222, 4164, 5882, 6191, 6217, 8216 |
| Vha464I | CTTAAG | 3 cut(s) | 8015, 11185, 11270 |
| VneI | GTGCAC | 1 cut(s) | 7784 |
| VspI | ATTAAT | 1 cut(s) | 3486 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 194, 10232 |
| XbaI | TCTAGA | 2 cut(s) | 581, 9710 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3697, 6571, 8213 |
| XhoI | CTCGAG | 2 cut(s) | 4376, 7209 |
| XmaJI | CCTAGG | 1 cut(s) | 2608 |
| XmiI | GTMKAC | 6 cut(s) | 2787, 4451, 7013, 8128, 10904, 11289 |
| XmnI | GAANNNNTTC | 5 cut(s) | 3937, 8298, 9081, 9225, 9634 |
| ZrmI | AGTACT | 3 cut(s) | 846, 4228, 7739 |
| Zsp2I | ATGCAT | 4 cut(s) | 2206, 4128, 5764, 9375 |