Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014629.1

Orthogroup ID

OG0004425

Physical Location & Seq

Genomic Coordinates Reverse (-)

50889 .. 71372

Gene Structure 20484 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014629.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 12138 bp

atggttggaaggaaatttgggtggttggaatggattggggattcatggaagtgtctgactctgctggcagaaattttttgtgaaagattttccaccttttatgcacttgcggttgatattttatttcaaagtttggaagtggacaatagtaaccaagcagtgggaactggaagaattagctccttccaagttcatggagtattaaaaactaatctccaattattatctttgcagaagtctgggcttctcccaatctctgtgcagaaaatactgcaatttgatgctccaatctctcagttgcgtttgtgtcctaatcacttggtaacaggcagttcggctgccacttatatattcttgcttcaacacgggaatattgaagttgttgaacaagcactgacttcgttaacagaggagctggagttattaaaagcgatgctggagaaagccctgggccatgacgatggggttcttgcatgttctaaaacatattcaaaacatgaattgtttgcattgattaaatttgatttgaaggttctgctgtcatgtgttttcttaagtgggggtaataattatagtttgattggccaaccagacattgcaaccctatatcttatgaggtcagaaaagttggtagagtttattattgagaaatttaatccttttgacttgcctattatggaatatgtggatttgcaagtcaatgttttgaggatgtttgacaggctaacagtagttaagaaaagtacctgctctttgtcatatcagagtagtggcaaatcatcaatggatggtacctctgataaattatttaatagtgagtctttgacctatgaacattcggttgtggttgttgagaatctgagaaagtacagtctgttttttgtgaaagctctccatgtctcttctcctcttgcagttaaagtaactgcgctggattgggtacaaagattttgtgagaatgttattgctttaaatgagaaatcagacacagaaactcgtttctatgaagtgtatggtaatgatagaattattgggaacatgctttactcaattctggatgctgcatctgatagggaaccaaaagtgaggtcacatgttgcaatagtattggagctgttactacaggcaaggcttgtacatcctgtttacttttatagtatggctgaagtggtgttgggtaaactcggtgatcctgataatgatataaaaaatgcatttgttagactgcttgctattgttgtacctactacattgtatgcatgtgggcttcatgattatgggacatcttcttcatctagggccggtgctgttcaggtaggcaacagttctaacatgcagtggaagcaagtgttttccttgaagcagctccctcagcaacttcactcacaacaactggtgaccatattgagttacatatcccaaagatggaaggtgcctctttcttcttggatccaacggcttattcattgctgcagaagttcaaaagaccttcttgcacgtcaactcgaggaaacaggaaatgttgctactggtgtgtggttggatattaaagtggatgatggttttcttgaaaaacattgctcagtaaataatctggctggtgcttggtgggctgtacaagaagctgctagatattgtatttccacacggcttcggactaacctaggtgggccaacccagacttttgcagcattagagcgaatgcttttggacgttgcacacctattacagtatgatagtgaacagactgatgggaacttgagtatgatagggtcttctggtgctcatttgttaccaatgaggttactattcgattttgttgaggctctaaagaaaaatgtatacaatgcatatgaggggtctgctgttttacctcctgctactcggtcaagttccttattctttcgagctaataagaaagtatgtgaggagtggttctctcgtatatgtgagccaatgatgaatgctggtttagctctacaatgccatgatgctacaattcactattgtgcgctgcgtttacaggagctcaggagtcttgtggcttcagctttaaatgacaagtctagggtacaagtaactgagcaccttcataatatcaagggtagattgtctgcagacatattgagggttttacggcacatggcattggctctgtgtaagactcatgaatcagaggctttagttggtctggaaaaatgggtttcgttgacgttctttccctttcttgtagaggaaaaccagtccagtaacagtgggatgtctggacccattacatgggttactgggcttgtgtatgaggcagaaggtaaatatgaaaaggccgctgctcactttacccacttgctacagtctgaggagtcactgagttccttgggttctgatggtgtacaatttgtcattgcacgtatcattgagtgttatacttctgtttgtgattggaaatcattagaatcctggttactggagttgcagacacttcgtgccaagcatgctgggaagagttattgcggtgcgctaacgacaactggcaatgaaattaatgcaattcatgccttggcacagtatgatgagggtgaatatcaggcagcatgggcatgcctgggtttgactcctaaaagtagcagtgagctcgcacttgatcccaaattggccttgcaaagaagtgagcagatgctcttacaggcaatgctttttcagaatggtgaaaaggaagataaggtgccacatgagttggagaaggccaggtcgatgctggaggaaacattgtctgttctgccgctagatgggttagaagaggtggccgcacatgcgactcagttgcactgcatctttgcatttgaggaattttacaagattaaaggtagccaagataaacccaggcagctgcaatctgtgttaagttcatatgtccaatttatgcagccagaaataggcagagttcatcaagactgtgacccttggttaaaagttcttcgagtttatcaaaccatttctcctgtttctccagctactctaaagctctgtatgaacttgttaagtttggcccgcaaacgaggaaacttactgttggcaaatcgtttaaacagcaatctcaaagatcgcatatcgagctgctctggggaaagacaccagcatttcctcatctcgaaactgcagtatgagggtatcctgctaatgcatgctgaaaacaacttggaggatgctttgaccaacctatggtcttttgtgagtcctatcatgatttcttcaccatctatcgaatttgatgctgacaatggtattctgaaagccaaggcatgcttgaaactctcaaactggcttaaacagaagtattcagattcgaggctagatgggattattgttaagatgcgatcagattttgatatggcctattcctcatctcccagcagagggggaccctcatttgtcgatgagattttaatctctgaaccacccctaggtcctattgttgaggagtttgttggtacagctacaaagttgtctactcatctatgccccactatgggcaaatcctggatttcttatgcctcctggtgtttcagtcaagccagagaatctcttttaaccccacatgaaaatactcttcgctcatgctcattttctccttctcttgttaatgaagttctacctgagagattcaacctaactgaaggtgagatcataaaagtaagatctttgattttacagctcttccagaataaggatgatggggctttcactgctgaacagggagaggtgagcttttctattgattctgctgcaccaaaaaatgacaacactgtgatggcattggttctgcaagtagtgaatattattgaaactgtttctagggcacctggtgttgaagactcaagtgaagattgcctttctgctgctctagcttctcagttgaagatctgcttccttcatgccaatattggcttaaatgaaaacgacataatttctgttgtcaatgatttagtagctgtgtggtggtctttgaggaggaggagagtgtccctctttggccacgcagctcaaggatttatacagtatctttcatattcatctgccaaaatttgcaatagtggtttggttgactctggtcctgaacctatgaaacaaaaaactggcagctatactcttagggccacattgtatgtcctgcatattcttctcaattatggagctgagttgaaagatatacttgaacctgctctttcaacagttcctttgtcaccgtggcaggaggtcaccccccaattgtttgctcggttaagttctcatcctgagcaagtggtacggaagcagttggaggggttattgatgatgctggccaaacaatctccttggtccatcgtctacccgacattagttgatgtgaatgcttacgaagagaagccttcggaggagctccaacacatacttggttgtttgagtaaactatacccaagactgattcaggatgtccagctcgtgataaatgagctaggaaatgttactgttctttgggaggagctatggctcagcacactccaagatcttcacacagatgtgacgaggcgcataaatgtactaaaggaggaagctgcacgaattgcagaaaatatcactcttagccagagtgagaagaacaagataaatgccgcgaaatactcagccatgatggctcctattgttgtggccttagaacgtcgtctatcttccacatctcggaaaccggaaacacctcatgaggtatggttccatgaggaatataaagatcggttgaaatcggccatcacagccttcaagacacctccagcatctgctacagcacttggagatgcatggcgtccatttgatattattgctgcctccttggcatcttatcaaaggaagtcatcaatttgtttaagagaagtcgcaccacaattggctctactatcatcgtctgatgttccaatgcctggtcttgaaaagcaagatacagtgtctgaatctgacagaggtctcagtgctaatcttcaaggaattgttaccattgcttctttctctgaggacgtggctatcatatcaacaaagactaagcctaagaaacttgttattcttggttctgatggtcaaaagtacacatatcttttgaaaggaagggaagatctccggcttgatgccagaatcatgcagctcttgcaagctatcaacggttttctgcattcctcagtcgcaactcatagtcactttcttggtattcgctattattctgtgactccaattagtggccgggctggtcttatccagtgggtgggtaatgtgattagtatatacagtgtctttaagtcttggcaaaaccgcacccaactagcgcagctctcagcagtaggtggtgacaattcaaaaggttctgttcctccagctgttccccgacctagtgacatgttctatggtaaaatcataccagcactcaaagagaaaggtataaggagagtaatttcacgaagagactggcctcatgaggtgaagcgtaaagttctcatggatcttatgaaggagactcctagacagcttctttatcaagaactctggtgtgctagtgaaggattcaaatccttcagctcgaaacagaaaaggttttctggaagtgttgctgccatgagcatggtgggtcacattcttggccttggggatagacacttggataatatcctcatggatttctgtagtggtgatatggtacatattgattacaatgtttgttttgataaagggcaaagactaaaaattccagaaattgtacccttccgccttacacaaaccattgaagctgcattagggatgactggaatagaaggtacctttaggtcaaactgtgaatcggttattggtgttttgaagaagaacaaagacatacttttgatgttactagaagtgtttgtttgggaccctctggtggaatggacacggggagattttcatgatgatgctgcaattggcggtgaagaaaggaagggcatggagttggctgtcagtctgagtttatttgcatctcgtgtgcaggaaattcgcgtcccgttacaggaacatcatgatcttttactgtctactctaccagctgttgaatctgctcttgagaggtttgccaatgttctaaaccaatatgaactcgcatctacactcttttatcgagctgatcaagagagatctaacctaattctgcatgagacaactgcaaagtccattgtttccgacgcaactagtaattcagagaaaatccgtgccttgtttgaaattcaggctcgagaatttgcccaagcgaaggccttggttgctgagaaatctcaagaggcagcaacctggatggaacaacatggaaggatccttgatgctttacgtagcaatttacttcaagaaattaatgccttcttaaagcttagtagtatgcaagaaaatttgtctctaacatcagcagttctggtggctggggttccactgaccattgttcctgagcctacacaagcacagtgctatgatattgatagggaggttgctcaactagtatctgaattagatgatggactctcttctgccacagccgctcttgaagtatattctttggctttgcaaagaattttgccactaaattacattacaacaagtgcagttcatggttggtcacagattttgcagctgtctgttggtgctctttcctccgatatactctctcttgctagaagacagggttctgagctcatttcaaaatatggggacaattttgattctatcaaacagagacatgatgatctgtgccgtagagtagagaagtattccctagagatagagaagctggaagcggagtgtgctgagctagtgcactcaattggctcagagactgaatcacaggcaaaggaccgacttttgtctgcttttatgaaatacatgcaatctgctggtattgcaaagaaagaagatgctatttcctccatccaatttgggcaatcaaaatatgatgggaatggtacaaaagatgctagagtgcaaggggagctgaatgagaaaagggagaaagtcctatttgttttaaatacagctgccagttatctgtataatgagattaagctcaaggtgctcaacatattcagcgactcaactgaaagaagaactactgccaatcagattaattatgaatttgaaactattttctctggatttgaagagcaagtagagaaatgcatacttttagcagggtttgttaatgagttacagcaattgattggtagagatgttcttactggtgacacagacaaaggccatccaggctatggttctgatagaaattgggctgccatttttaaaaccattttactttccttcaaaagcttaattgggcaaatgactgaagctgttcttccagatgtaataagatctgcagtttcactgaatccagaagtcatggatgcatttggattgatctcacaaattcggggttcaattgatacggtactagagcaatttattgaggtagagatggagagggcatctttagttgaactggaacagaactactttgttagggttggccacataactgagcagcagctggctcttgaagaagctgctatgaaaagtagggatcatctctcatgggaagaggcagaggagcttgcctctcaagaagaagcctgtagggcgcagctagaccaactccatcaaacttggaaccagagggatttgcgcactactgccctcataagaagagaaactgatataaagaatgccctgactacttctgcgcaccattttcagtctctagttggtgtcaaagatgaaagagagctgcatgcctcaaaaagcaaggtgctacttgccctgcttgttaagcctttttctgagttggaagcaattgataaagtattgtcatcaattggaggttcttctacttcgcactcaaatgaggttcctaatttaacagatttactgacttcagggtatccaatatctgaatacgtttggaagcttggaagcttattgcatctccattctttctttgtttggaaaattggtgttattgattcgtttcttgattcatgcatgaatgatgtagcttcatatatggatcagactttagggtttgaccagctcttcaatgtagttaagagaaagcttgaaatgcaacttcaagaacatcttcgtagatacctgaaagaacgagttggtcctagtttattggctagcttagataaagaaatcgaacgtctgaagcaactgactgaggttacaaaggaggttgctcttgatcaagtgcaaaaagacgttggggccctggaaaaggttcaacttatgctcgaggaattctgcaatgcacatgaaactgccagagcagcaagggtagctgtatctgtaatgaaaaggcaggtgaatgaactcagagaagctctttgcaagactggcctggagattgctcagatggaatggatgcatgatgctgctttgactccttcatacagtagcagggtcatgtttcagaaatttcttggtggtgatgatagcttgcatcctattgtcttgaaccttaacaggcctaatatgctggaaagtttacagtcttctgtgtcaaagatagccaggtctatagagtcactccaagcttgtgaacgaagttcccttacagctgaagggcagcttgagagagcaatgggatgggcctgtggtggcccaaattccagtgcaactggaaatggttcaagcaagacttctggaattcctcctgaatttcatgaccatctcacgaggcggcgacaactactatggcaaggtagagaaaaggcatcggatataataaaaatttgtatgtctgtactggagtttgaggcatcacgagatggccttttccggtctctgggagagatctacccagccaggtctggtggtgattgtagaacgtggcagcaagcttacttgaatgcactaaaaagattggatatcacttaccactcttttgctcgcactgaacaagaatggaagcttgcacagagcacaatggaaactgcttccagtggattgtcttctgcaaccaacgaacttaatattgcatctctcaaagcaaagtcagcttcaggtgatttacagagcacggttcttgcaatgagggattgtgcatgtgaagccagtgttgcactgatggcatatgctggtgtttcaaatcgtcattctactttaacttctgaatgcggttttatgcttgaagaggtccttgcaataactgaagatctacatgatgttcatggtctaggaaaggaggctgctgcagttcatcgttctcttgtggaagacctttcgaaggcaaatgcaattcttcttccactggaaacagtattgtccaaagatgtagctgctatgaccgatgctatatgtagggaaagagagaccaagatggaaatatctccgattcatggacaagccatataccagtcctattctctaaaaatcagggaggcttgccagaccttagatcccttggtgccctcacttacttcatctgtgaaggggctctattctatgttgaccaggcttgcacgaactgcaagtctccatgctgggaatcttcataaagctcttgaaggactaggagaaagccaggaagtagaatcgccagtaactgatgtatcaaggccagatcttgctgcagatgctactgggtttgatgacaaggagaaggagaacctctccatgtcaaatggtgagagcaccaaagattttgttggcattggacttcctttggaagataaaggatggttatctccaccagatagtatctgcagtagtagtacagattctggcatttccttgcctgaaatgagtcttccaggtagcttcattgatcaagaagatataaagcaacagcgtttgcatggacctagtagcagagatgctatagattttcaaaataccaccccttactctcaagctgatagccaagaaatgttggattctccgcacagatcaaaatttacggacgcagataacgctcatattggttctttcaagtcagcaccaagtgacctaaatgaatatccactggctccagcatcaccaagtgatgaacctgtcagtgtctgtcctgatacttcacgtccttcaaatgagaacagagaggtggtgtttgggggtaaagatgaaatatcctcactgaacaagattataattaaggacgaaactcgtgatgctacacatgcttctagtcgagtgggcaggggtaaaaacccttatgcaatgtcaatcttgagacgagttgagttgaaactagatggtcgagatatatctgacaacagagaaattagtatctccgaacaagtggactatctacttaagcaagccactagtgtagacaatctttgcaacatgtatgaagcctcctcattcaatcctcaatcaaacaacatgaatctgagcaaacctcaattcggagcctcttcctcttcctcctcgtcttcatcttccatccatttgttcacacacgatgtctttttgagcttcagaggtgcggatacgcgcaacaattttacaggccatttgtaccgcaatttggttcaggagggaattaacaccttcattgataatgaccttacaagaggagaagatataacaaaggagcttctcgaagtaattgaaggatcaaggatttccattgttgttttttctgccaactatgcatcttcaaagtggtgcttggatgaacttgtcaagatctttcaatgtaaagaatccaagaaccaaatcgtttacccaatattctacaaggtagatccgtcggagatacgacaccagaagggtgaggttggtgatgcaattgctcaccttagcaaatacaaggattacttaaagaaggtggaaagttggaaggtagctcttacacaagcagcaactttgtctgggtggcacatcttggatggaggcttacagtatttggagctgtttgattgtgatgacttagttgaagttgatccttcggttggccgtctcgataagctcgccaatttgaaattcaccggttgtaaaaagctgcagatgtttcaagagaggatcaacatgaaatctttggaaactctggttctctctgagtgcccgcttaagttcttccctgaaattgagggagacatgaagtctttggcaactctggatctaagtaagaccgccatcaaagagttacctagctcagttggaaatcttactggccttaaatccttgtttctatataggtgttatagtcttacagatataccatcgagcattttctatgaattgcaacgtctggaggatcttgatctacagttctgctctaaccttgttacatttccaacacagtcagaatcacttcctcctccaccggtcttttcaactaacctcacttccagattacaagttcatctgaacggttgcttccggcttgaagaaatttcagaatttccgcgagaaatagatggcttatatctgaggagttgtgcgtcattggaaagaatttcaaagatgtcaaaaattttggagggtaaagattcaaaaatgttcggtgagttggacttgattctctgccggagactctgcgacaatctggctcgtggagttgaagttgacaagccactatttcatgtggccaagaagagaaagaagatgacatcatcaccgtctgcgggaaccaaagaattgaaattgatggctttgttgactctttttttctcttgtgcgaaatctgaagaattccaagtagaatttcctgcaagtgctccgcttccaaactggttcacctgccatcaggatgtgaaaagtgaagacattaaagaacgtgagttttgcattgaaattcctcaaaactccaattgggacaacaacgggttggctctctgtattcaatggtcctctgcttacgtcactcattttgtttacatcaatggaatgaagtttgatgagaaaatcatgtatgggaagacagtgtgggtgcattatattccatttgttacagtaataaggaggttgagtgagtgtgggaagccgccacctgatatgtttcgagttatgtttcgttttcaaaatgattctctttttgacggatttggaaggtggggagtccacctgattgaagatttggaaggagaaggccgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

4045

Amino Acids

451.82

Weight (kDa)

5.69

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35075
fragaria_vesca	FvH4_2g07370 FvH4_2g07370
malus_domestica	MD10G1086500.v1.1 MD14G1180200.v1.1
prunus_persica	Prupe.8G112500_v2.0.a1
pyrus_communis	pycom10g06870
rosa_chinensis	RchiOBHm_Chr6g0260251 RchiOBHm_Chr6g0260261 RchiOBHm_Chr6g0260791
rosa_laevigata	RLG00000014485
rosa_multiflora	Rmu_co8055024.1_g000001 Rmu_co8166074.1_g000001 Rmu_sc0014629.1_g000010 Rmu_sc0023276.1_g000001
rosa_roxburghii	Rroxscaffold_7G00207390
rosa_rugosa	Rorug05G0592900
rosa_samantha	Rh6AG109300 Rh6AG110500 Rh6AG112300 Rh6BG106200 Rh6CG097700 Rh6CG098100 Rh6CG102000 Rh6CG102200 Rh6CG103000 Rh6DG091700 Rh6DG093600 Rh6DG093900 Rh6DG094300
rosa_wichuraiana	Rw6G009500 Rw6G009940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	10181
AarI	CACCTGC	2 cut(s)	8383, 11789
Acc16I	TGCGCA	2 cut(s)	7715, 7773
Acc36I	ACCTGC	4 cut(s)	755, 4225, 8383, 11789
Acc65I	GGTACC	2 cut(s)	791, 5834
AccB1I	GGYRCC	6 cut(s)	791, 1432, 2722, 3856, 5834, 9499
AccB7I	CCANNNNNTGG	7 cut(s)	160, 2277, 3219, 4952, 5261, 5287, 7301
AccBSI	CCGCTC	1 cut(s)	6578
AccI	GTMKAC	5 cut(s)	1842, 3506, 4365, 6083, 10365
AccII	CGCG	4 cut(s)	4652, 6048, 10531, 11449
AcoI	YGGCCR	9 cut(s)	583, 2802, 4030, 4338, 4779, 5263, 7558, 10993, 11628
AcyI	GRCGYC	1 cut(s)	4837
AdeI	CACNNNGTG	4 cut(s)	2483, 3863, 10037, 10076
AflII	CTTAAG	3 cut(s)	553, 10346, 11108
AflIII	ACRYGT	3 cut(s)	1093, 5418, 10380
AgeI	ACCGGT	2 cut(s)	11027, 11365
AhdI	GACNNNNNGTC	1 cut(s)	11140
AhlI	ACTAGT	3 cut(s)	6236, 6535, 10358
AjiI	CACGTC	3 cut(s)	1499, 5047, 10112
AjuI	GAANNNNNNNTTGG	8 cut(s)	1446, 1478, 5847, 5879, 11006, 11038, 11730, 11762
AleI	CACNNNNGTG	2 cut(s)	2007, 4556
Alw44I	GTGCAC	1 cut(s)	6851
AlwNI	CAGNNNCTG	7 cut(s)	4811, 4979, 6872, 7579, 9638, 9815, 10095
Ama87I	CYCGRG	3 cut(s)	1505, 6279, 8324
ApaI	GGGCCC	1 cut(s)	8302
ApaLI	GTGCAC	1 cut(s)	6851
ArsI	GACNNNNNNTTYG	4 cut(s)	1073, 1105, 9550, 9582
AseI	ATTAAT	3 cut(s)	2541, 6396, 7158
AsiGI	ACCGGT	2 cut(s)	11027, 11365
Asp700I	GAANNNNTTC	5 cut(s)	7383, 8166, 8310, 8719, 11352
Asp718I	GGTACC	2 cut(s)	791, 5834
AspA2I	CCTAGG	2 cut(s)	1663, 3460
AspLEI	GCGC	9 cut(s)	931, 2014, 2518, 4569, 5350, 7672, 7716, 7774, 10533
AsuC2I	CCSGG	1 cut(s)	5267
AsuII	TTCGAA	1 cut(s)	9317
AsuNHI	GCTAGC	1 cut(s)	8210
AvaI	CYCGRG	3 cut(s)	1505, 6279, 8324
AvrII	CCTAGG	2 cut(s)	1663, 3460
BaeGI	GKGCMC	5 cut(s)	3859, 6855, 8302, 9504, 11105
BaeI	ACNNNNGTAYC	2 cut(s)	9627, 9660
BalI	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
BamHI	GGATCC	2 cut(s)	1449, 6357
BanI	GGYRCC	6 cut(s)	791, 1432, 2722, 3856, 5834, 9499
BanII	GRGCYC	6 cut(s)	2031, 2634, 4419, 6732, 8302, 9531
BarI	GAAGNNNNNNTAC	2 cut(s)	8629, 8661
BauI	CACGAG	6 cut(s)	4478, 6030, 8767, 8856, 10197, 11592
BbvCI	CCTCAGC	1 cut(s)	1371
BceAI	ACGGC	5 cut(s)	1472, 1664, 2153, 6774, 10980
BciVI	GTATCC	3 cut(s)	3179, 7980, 10519
BclI	TGATCA	3 cut(s)	6172, 8275, 9859
BcnI	CCSGG	1 cut(s)	5267
BcuI	ACTAGT	3 cut(s)	6236, 6535, 10358
BfrI	CTTAAG	3 cut(s)	553, 10346, 11108
BfuAI	ACCTGC	4 cut(s)	755, 4225, 8383, 11789
BfuI	GTATCC	3 cut(s)	3179, 7980, 10519
BglI	GCCNNNNNGGC	4 cut(s)	4670, 4865, 7296, 7667
BlnI	CCTAGG	2 cut(s)	1663, 3460
BlpI	GCTNAGC	2 cut(s)	4529, 6843
BmeRI	GACNNNNNGTC	1 cut(s)	11140
BmeT110I	CYCGRG	3 cut(s)	1505, 6279, 8324
BmgBI	CACGTC	3 cut(s)	1499, 5047, 10112
BmrI	ACTGGG	2 cut(s)	2295, 9684
BmtI	GCTAGC	1 cut(s)	8214
BmuI	ACTGGG	2 cut(s)	2295, 9684
BoxI	GACNNNNGTC	3 cut(s)	4107, 4992, 6898
Bpu10I	CCTNAGC	5 cut(s)	1371, 2030, 4293, 6486, 10838
Bpu1102I	GCTNAGC	2 cut(s)	4529, 6843
Bpu14I	TTCGAA	1 cut(s)	9317
BpuMI	CCSGG	1 cut(s)	5267
BsaAI	YACGTR	2 cut(s)	2408, 6374
BsaBI	GATNNNNATC	4 cut(s)	3443, 5587, 9775, 11301
BsaHI	GRCGYC	1 cut(s)	4837
BsaI	GGTCTC	3 cut(s)	5000, 8880, 9398
BsaWI	WCCGGW	4 cut(s)	4723, 8871, 11027, 11365
BsaXI	ACNNNNNCTCC	8 cut(s)	404, 434, 2980, 3010, 11589, 11619, 11995, 12025
Bse118I	RCCGGY	3 cut(s)	1301, 11027, 11365
Bse8I	GATNNNNATC	4 cut(s)	3443, 5587, 9775, 11301
BseJI	GATNNNNATC	4 cut(s)	3443, 5587, 9775, 11301
BseSI	GKGCMC	5 cut(s)	3859, 6855, 8302, 9504, 11105
BseYI	CCCAGC	5 cut(s)	2495, 3407, 6461, 8893, 9575
BsgI	GTGCAG	5 cut(s)	281, 3768, 4578, 6056, 6660
Bsh1236I	CGCG	4 cut(s)	4652, 6048, 10531, 11449
BshNI	GGYRCC	6 cut(s)	791, 1432, 2722, 3856, 5834, 9499
BshTI	ACCGGT	2 cut(s)	11027, 11365
BsiHKCI	CYCGRG	3 cut(s)	1505, 6279, 8324
BsiSI	CCGG	9 cut(s)	1302, 4724, 5146, 5266, 8872, 11028, 11366, 11422, 11569
BslFI	GGGAC	7 cut(s)	1294, 3432, 4006, 5936, 6035, 6761, 11870
BsmBI	CGTCTC	2 cut(s)	10258, 11003
BsmFI	GGGAC	7 cut(s)	1294, 3432, 4006, 5936, 6035, 6761, 11870
BsmI	GAATGC	7 cut(s)	1707, 1969, 4393, 5197, 7759, 8947, 9212
Bso31I	GGTCTC	3 cut(s)	5000, 8880, 9398
BsoBI	CYCGRG	3 cut(s)	1505, 6279, 8324
Bsp119I	TTCGAA	1 cut(s)	9317
Bsp120I	GGGCCC	1 cut(s)	8298
Bsp1407I	TGTACA	3 cut(s)	1135, 1615, 2389
Bsp1720I	GCTNAGC	2 cut(s)	4529, 6843
BspFNI	CGCG	4 cut(s)	4652, 6048, 10531, 11449
BspHI	TCATGA	8 cut(s)	1270, 2167, 3240, 4735, 5494, 5956, 6067, 8755
BspMAI	CTGCAG	8 cut(s)	1475, 2119, 3159, 7411, 9289, 9667, 9800, 11046
BspMI	ACCTGC	4 cut(s)	755, 4225, 8383, 11789
BspOI	GCTAGC	1 cut(s)	8214
BspQI	GCTCTTC	3 cut(s)	3719, 7188, 8126
BspT104I	TTCGAA	1 cut(s)	9317
BspT107I	GGYRCC	6 cut(s)	791, 1432, 2722, 3856, 5834, 9499
BspTI	CTTAAG	3 cut(s)	553, 10346, 11108
BspTNI	GGTCTC	3 cut(s)	5000, 8880, 9398
BsrBI	CCGCTC	1 cut(s)	6578
BsrFI	RCCGGY	3 cut(s)	1301, 11027, 11365
BsrGI	TGTACA	3 cut(s)	1135, 1615, 2389
BssAI	RCCGGY	3 cut(s)	1301, 11027, 11365
BssNAI	GTATAC	1 cut(s)	1843
BssNI	GRCGYC	1 cut(s)	4837
BssSI	CACGAG	6 cut(s)	4478, 6030, 8767, 8856, 10197, 11592
Bst1107I	GTATAC	1 cut(s)	1843
Bst2BI	CACGAG	6 cut(s)	4478, 6030, 8767, 8856, 10197, 11592
BstACI	GRCGYC	1 cut(s)	4837
BstAFI	CTTAAG	3 cut(s)	553, 10346, 11108
BstAPI	GCANNNNNTGC	4 cut(s)	2552, 4601, 5173, 9560
BstAUI	TGTACA	3 cut(s)	1135, 1615, 2389
BstBAI	YACGTR	2 cut(s)	2408, 6374
BstBI	TTCGAA	1 cut(s)	9317
BstDSI	CCRYGG	1 cut(s)	4244
BstEII	GGTNACC	2 cut(s)	1396, 4255
BstENI	CCTNNNNNAGG	2 cut(s)	8306, 9317
BstFNI	CGCG	4 cut(s)	4652, 6048, 10531, 11449
BstHHI	GCGC	9 cut(s)	931, 2014, 2518, 4569, 5350, 7672, 7716, 7774, 10533
BstPAI	GACNNNNGTC	3 cut(s)	4107, 4992, 6898
BstPI	GGTNACC	2 cut(s)	1396, 4255
BstSLI	GKGCMC	5 cut(s)	3859, 6855, 8302, 9504, 11105
BstSNI	TACGTA	1 cut(s)	6374
BstUI	CGCG	4 cut(s)	4652, 6048, 10531, 11449
BstXI	CCANNNNNNTGG	3 cut(s)	194, 461, 5641
BstZ17I	GTATAC	1 cut(s)	1843
BsuI	GTATCC	3 cut(s)	3179, 7980, 10519
BtgI	CCRYGG	1 cut(s)	4244
BtgZI	GCGATG	1 cut(s)	446
BtrI	CACGTC	3 cut(s)	1499, 5047, 10112
BtsI	GCAGTG	5 cut(s)	165, 1343, 2632, 2824, 3741
BveI	ACCTGC	4 cut(s)	755, 4225, 8383, 11789
CaiI	CAGNNNCTG	7 cut(s)	4811, 4979, 6872, 7579, 9638, 9815, 10095
CciI	TCATGA	8 cut(s)	1270, 2167, 3240, 4735, 5494, 5956, 6067, 8755
CfoI	GCGC	9 cut(s)	931, 2014, 2518, 4569, 5350, 7672, 7716, 7774, 10533
Cfr10I	RCCGGY	3 cut(s)	1301, 11027, 11365
CseI	GACGC	5 cut(s)	4826, 6037, 6239, 10004, 11472
CsiI	ACCWGGT	1 cut(s)	3859
CspAI	ACCGGT	2 cut(s)	11027, 11365
CspCI	CAANNNNNGTGG	2 cut(s)	2715, 2750
DraI	TTTAAA	5 cut(s)	972, 2055, 3084, 7062, 7333
DraIII	CACNNNGTG	4 cut(s)	2483, 3863, 10037, 10076
DriI	GACNNNNNGTC	1 cut(s)	11140
EaeI	YGGCCR	9 cut(s)	583, 2802, 4030, 4338, 4779, 5263, 7558, 10993, 11628
Eam1105I	GACNNNNNGTC	1 cut(s)	11140
EciI	GGCGGA	1 cut(s)	5774
Ecl136II	GAGCTC	4 cut(s)	2029, 2632, 4417, 6730
Eco105I	TACGTA	1 cut(s)	6374
Eco147I	AGGCCT	2 cut(s)	6302, 8560
Eco24I	GRGCYC	6 cut(s)	2031, 2634, 4419, 6732, 8302, 9531
Eco31I	GGTCTC	3 cut(s)	5000, 8880, 9398
Eco32I	GATATC	1 cut(s)	8962
Eco53kI	GAGCTC	4 cut(s)	2029, 2632, 4417, 6730
Eco88I	CYCGRG	3 cut(s)	1505, 6279, 8324
Eco91I	GGTNACC	2 cut(s)	1396, 4255
EcoICRI	GAGCTC	4 cut(s)	2029, 2632, 4417, 6730
EcoNI	CCTNNNNNAGG	2 cut(s)	8306, 9317
EcoO109I	RGGNCCY	6 cut(s)	3419, 3464, 5923, 8298, 8299, 9229
EcoO65I	GGTNACC	2 cut(s)	1396, 4255
EcoRI	GAATTC	3 cut(s)	8330, 8739, 11732
EcoRV	GATATC	1 cut(s)	8962
EcoT38I	GRGCYC	6 cut(s)	2031, 2634, 4419, 6732, 8302, 9531
Esp3I	CGTCTC	2 cut(s)	10258, 11003
FaqI	GGGAC	7 cut(s)	1294, 3432, 4006, 5936, 6035, 6761, 11870
FauI	CCCGC	3 cut(s)	3056, 11112, 11659
FauNDI	CATATG	3 cut(s)	1852, 2908, 9166
FbaI	TGATCA	3 cut(s)	6172, 8275, 9859
FblI	GTMKAC	5 cut(s)	1842, 3506, 4365, 6083, 10365
FriOI	GRGCYC	6 cut(s)	2031, 2634, 4419, 6732, 8302, 9531
FspI	TGCGCA	2 cut(s)	7715, 7773
GlaI	GCGC	9 cut(s)	930, 2013, 2517, 4568, 5349, 7671, 7715, 7773, 10532
GsaI	CCCAGC	5 cut(s)	2499, 3411, 6465, 8897, 9579
HapII	CCGG	9 cut(s)	1302, 4724, 5146, 5266, 8872, 11028, 11366, 11422, 11569
HgaI	GACGC	5 cut(s)	4826, 6037, 6239, 10004, 11472
HhaI	GCGC	9 cut(s)	931, 2014, 2518, 4569, 5350, 7672, 7716, 7774, 10533
Hin1I	GRCGYC	1 cut(s)	4837
Hin6I	GCGC	9 cut(s)	929, 2012, 2516, 4567, 5348, 7670, 7714, 7772, 10531
HinP1I	GCGC	9 cut(s)	929, 2012, 2516, 4567, 5348, 7670, 7714, 7772, 10531
HincII	GTYRAC	7 cut(s)	405, 1502, 2211, 4102, 9543, 11608, 11700
HindII	GTYRAC	7 cut(s)	405, 1502, 2211, 4102, 9543, 11608, 11700
HindIII	AAGCTT	8 cut(s)	6410, 7357, 7994, 8002, 8141, 8625, 8931, 9002
HpaI	GTTAAC	1 cut(s)	405
HpaII	CCGG	9 cut(s)	1302, 4724, 5146, 5266, 8872, 11028, 11366, 11422, 11569
Hpy99I	CGWCG	3 cut(s)	4701, 6233, 10792
Hsp92I	GRCGYC	1 cut(s)	4837
HspAI	GCGC	9 cut(s)	929, 2012, 2516, 4567, 5348, 7670, 7714, 7772, 10531
KflI	GGGWCCC	2 cut(s)	3419, 5923
KpnI	GGTACC	2 cut(s)	795, 5838
Ksp22I	TGATCA	3 cut(s)	6172, 8275, 9859
KspAI	GTTAAC	1 cut(s)	405
LguI	GCTCTTC	3 cut(s)	3719, 7188, 8126
MabI	ACCWGGT	1 cut(s)	3859
MbiI	CCGCTC	1 cut(s)	6578
MlsI	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
MluNI	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
Mox20I	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
MroXI	GAANNNNTTC	5 cut(s)	7383, 8166, 8310, 8719, 11352
MscI	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
Msp20I	TGGCCA	5 cut(s)	585, 4032, 4340, 7560, 11630
MspA1I	CMGCKG	8 cut(s)	2327, 2887, 5399, 6095, 6670, 7070, 7579, 8651
MspCI	CTTAAG	3 cut(s)	553, 10346, 11108
MspI	CCGG	9 cut(s)	1302, 4724, 5146, 5266, 8872, 11028, 11366, 11422, 11569
MssI	GTTTAAAC	1 cut(s)	3084
Mva1269I	GAATGC	7 cut(s)	1707, 1969, 4393, 5197, 7759, 8947, 9212
MvnI	CGCG	4 cut(s)	4652, 6048, 10531, 11449
NciI	CCSGG	1 cut(s)	5267
NdeI	CATATG	3 cut(s)	1852, 2908, 9166
NheI	GCTAGC	1 cut(s)	8210
NsbI	TGCGCA	2 cut(s)	7715, 7773
NspV	TTCGAA	1 cut(s)	9317
OliI	CACNNNNGTG	2 cut(s)	2007, 4556
PaeI	GCATGC	5 cut(s)	2495, 2601, 3185, 3303, 7823
PaeR7I	CTCGAG	3 cut(s)	1505, 6279, 8324
PagI	TCATGA	8 cut(s)	1270, 2167, 3240, 4735, 5494, 5956, 6067, 8755
PaqCI	CACCTGC	2 cut(s)	8383, 11789
PasI	CCCWGGG	1 cut(s)	448
PceI	AGGCCT	2 cut(s)	6302, 8560
PciI	ACATGT	3 cut(s)	1093, 5418, 10380
PciSI	GCTCTTC	3 cut(s)	3719, 7188, 8126
PctI	GAATGC	7 cut(s)	1707, 1969, 4393, 5197, 7759, 8947, 9212
PdmI	GAANNNNTTC	5 cut(s)	7383, 8166, 8310, 8719, 11352
PflMI	CCANNNNNTGG	7 cut(s)	160, 2277, 3219, 4952, 5261, 5287, 7301
PfoI	TCCNGGA	1 cut(s)	3536
PinAI	ACCGGT	2 cut(s)	11027, 11365
PmeI	GTTTAAAC	1 cut(s)	3084
Ppu21I	YACGTR	2 cut(s)	2408, 6374
PpuMI	RGGWCCY	4 cut(s)	3419, 3464, 5923, 9229
PscI	ACATGT	3 cut(s)	1093, 5418, 10380
PshAI	GACNNNNGTC	3 cut(s)	4107, 4992, 6898
PshBI	ATTAAT	3 cut(s)	2541, 6396, 7158
PsiI	TTATAA	1 cut(s)	10181
Psp124BI	GAGCTC	4 cut(s)	2031, 2634, 4419, 6732
Psp5II	RGGWCCY	4 cut(s)	3419, 3464, 5923, 9229
PspEI	GGTNACC	2 cut(s)	1396, 4255
PspFI	CCCAGC	5 cut(s)	2495, 3407, 6461, 8893, 9575
PspOMI	GGGCCC	1 cut(s)	8298
PspPPI	RGGWCCY	4 cut(s)	3419, 3464, 5923, 9229
PspXI	VCTCGAGB	2 cut(s)	1505, 8324
PsrI	GAACNNNNNNTAC	2 cut(s)	1028, 1060
PstI	CTGCAG	8 cut(s)	1475, 2119, 3159, 7411, 9289, 9667, 9800, 11046
PstNI	CAGNNNCTG	7 cut(s)	4811, 4979, 6872, 7579, 9638, 9815, 10095
PvuII	CAGCTG	7 cut(s)	2887, 5399, 6095, 6670, 7070, 7579, 8651
SacI	GAGCTC	4 cut(s)	2031, 2634, 4419, 6732
SapI	GCTCTTC	3 cut(s)	3719, 7188, 8126
SexAI	ACCWGGT	1 cut(s)	3859
Sfr274I	CTCGAG	3 cut(s)	1505, 6279, 8324
SfuI	TTCGAA	1 cut(s)	9317
SlaI	CTCGAG	3 cut(s)	1505, 6279, 8324
SnaBI	TACGTA	1 cut(s)	6374
SpeI	ACTAGT	3 cut(s)	6236, 6535, 10358
SphI	GCATGC	5 cut(s)	2495, 2601, 3185, 3303, 7823
SseBI	AGGCCT	2 cut(s)	6302, 8560
SspI	AATATT	5 cut(s)	373, 3835, 3940, 9067, 10770
SstI	GAGCTC	4 cut(s)	2031, 2634, 4419, 6732
StuI	AGGCCT	2 cut(s)	6302, 8560
TaqII	GACCGA	3 cut(s)	1875, 6906, 9395
TatI	WGTACW	8 cut(s)	867, 1135, 1615, 2389, 4576, 5112, 8836, 9806
TauI	GCSGC	7 cut(s)	2327, 2782, 2807, 4652, 6578, 8776, 12028
TspGWI	ACGGA	5 cut(s)	4321, 6245, 10007, 10776, 12096
Van91I	CCANNNNNTGG	7 cut(s)	160, 2277, 3219, 4952, 5261, 5287, 7301
Vha464I	CTTAAG	3 cut(s)	553, 10346, 11108
VneI	GTGCAC	1 cut(s)	6851
VspI	ATTAAT	3 cut(s)	2541, 6396, 7158
XagI	CCTNNNNNAGG	2 cut(s)	8306, 9317
XcmI	CCANNNNNNNNNTGG	4 cut(s)	2752, 4427, 5641, 7298
XhoI	CTCGAG	3 cut(s)	1505, 6279, 8324
XmaJI	CCTAGG	2 cut(s)	1663, 3460
XmiI	GTMKAC	5 cut(s)	1842, 3506, 4365, 6083, 10365
XmnI	GAANNNNTTC	5 cut(s)	7383, 8166, 8310, 8719, 11352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.