MD14G1180200.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
27287735 .. 27292959
5225 bp
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UTR
Exon/CDS
Intron
MD14G1180200.v1.1.491

Sequence Viewer

Length: 1524 bp
ATGATTAAAGTTTTGGTGTATGTGCAGGAAGGGATAAGGTTTTTGAATACATGGTTAGAAGGAGAAAGATTGATTGGTTTCTGTAAATATCTCGGAAAGAACACTCCAGAGCTTAAACCAGATGAAATTCCTCACTGTATGATGATGATTTTATTCAAGATTAATTGCAAAACCTGGCCATTCTTTATTAATCTGCTGATTCAGTGTGCTTCGTTGGAGATATCCTCCTCAAGCAAGCGGCGATTGCCCAAGTTGATATATGCAAAGACTCTACGGATAGTTGTGCAACAAGCAGAGGATGATAAAATTTTGAATGATGCAAACATGGTACATTCTTATGATGGTCTGCTATGGACACTGAGCTTGCAGGAACTTTCTTCTGTGCTGTTGCTTCCAGATCCAAAGCTGAAGAAACTGTCAGACTCGTCTCCCTCGAATGAGTTGTCTTGGCTGAACATGGAATGGAGTTCCATTTTGGAACGGACACAGTTACACATGAATTTACTGGAGCCTTTTATAGTGTTCAGGCGAGTGCTACTTCAAATCTCAAGTTGTAGGGACTGTGCAACATCTTCTGCAGGTTCTAGATTTTCTCAAGCCGCTGCAGCCTTGCATGAGTTTAAGTTGCTCGCTGTCGAATCAGGATTGGAAGGGTACAGACTTGAAGAAGCAAAGCTTCTGCGTGGCCAAGGTCAGCATGAGATGGCCTTCAATGGAGTAATGCAACAATTTTTTGGTTTAGTCAACACCTTTCTACAGAACCACCAGGATACATGGAAAAGAAGATTAGGAGTGCGTACATACAAGGTAGTTCCATTTACTCCAAGTGCCGGTGTTCTTGAATGGGTTAATGGCAGTCTTCCTCTTGGAGAATATCTTATAGGAAGGCCTGTCATGCATCATTTTTTCTTGGAGAGGTTTTTGCAACCGGCTGACTGGTTTGAGAAGAGACTTTCATACACGCGAAGTGTTGCTGCTAGTTCAATGGTTGGTTATATTGTTGGCCTCGGAGATCGACATTCTATGAATATCTTAATTGATCAAATGACTGCAGAAGTTGTTCGTATAGATCTTGGCGTTGCCTTTGAACAAGGCTTGATGCTCAAAACACCAGAACGGGTTTGTACTTTACTTACAAGGGACATCATTGATGGCATGGGTGTCACCGGAGTGGAAGGGTTTTTCAGAAGATGCTGTGAAGAAACTCTTTCTGTTATGAGGACAAATAAAGAAGCACTACTGACCATCGTTGAGGAAACGGATGATGACTTGAATTTAAGCTTTGAAGGCTCGCAAGATGAATATGAAGGTAACAAGGATGCTGCACGTGCACTGATGCGTGTAAAACAAAACTCGATGGATATGAAGAAGGGAAATGCGAAGCATACATGGACAGGTAGTTCTCGTGCCCCGCAGTTTCATCAATGTACCTATAATATGGAACAAGTTCAACTACTTATACAAGATGCGATTGATCCCGAGCGTCTTTGTCAACTGTTTCCTGGATGGGGAGCGTGGTTATGA

Protein Analysis

508

Amino Acids

57.87

Weight (kDa)

6.3

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 298 - 419 3.5e-29 Phosphatidylinositol 3- and 4-kinase
FATC PF02260 481 - 507 1.2e-10 FATC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 569
AccII CGCG 1 cut(s) 964
AciI CCGC 3 cut(s) 238, 600, 1412
AclWI GGATC 2 cut(s) 392, 1469
AcoI YGGCCR 2 cut(s) 176, 685
AcsI RAATTY 4 cut(s) 126, 306, 499, 1273
AcuI CTGAAG 1 cut(s) 428
AcvI CACGTG 1 cut(s) 1328
AfaI GTAC 5 cut(s) 330, 656, 799, 1126, 1429
AfiI CCNNNNNNNGG 2 cut(s) 830, 1508
AjnI CCWGG 3 cut(s) 173, 765, 1501
AjuI GAANNNNNNNTTGG 2 cut(s) 57, 89
AleI CACNNNNGTG 1 cut(s) 1169
AloI GAACNNNNNNTCC 2 cut(s) 1384, 1416
AluBI AGCT 5 cut(s) 112, 363, 406, 676, 1281
AluI AGCT 5 cut(s) 112, 363, 406, 676, 1281
Alw21I GWGCWC 1 cut(s) 1333
Alw26I GTCTC 2 cut(s) 432, 943
Alw44I GTGCAC 1 cut(s) 1329
AlwI GGATC 2 cut(s) 392, 1469
Ama87I CYCGRG 1 cut(s) 1478
AoxI GGCC 5 cut(s) 176, 685, 705, 887, 1003
ApaLI GTGCAC 1 cut(s) 1329
ApeKI GCWGC 4 cut(s) 602, 605, 974, 1322
ApoI RAATTY 4 cut(s) 126, 306, 499, 1273
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AseI ATTAAT 2 cut(s) 162, 189
Asp700I GAANNNNTTC 2 cut(s) 1059, 1446
AsuHPI GGTGA 1 cut(s) 1156
AvaI CYCGRG 1 cut(s) 1478
BaeGI GKGCMC 2 cut(s) 1333, 1411
BalI TGGCCA 2 cut(s) 178, 687
BauI CACGAG 1 cut(s) 1404
BbrPI CACGTG 1 cut(s) 1328
BbsI GAAGAC 1 cut(s) 851
Bbv12I GWGCWC 1 cut(s) 1333
BbvI GCAGC 4 cut(s) 589, 617, 961, 1309
BccI CCATC 6 cut(s) 335, 697, 1145, 1253, 1351, 1500
BciT130I CCWGG 3 cut(s) 175, 767, 1503
BciVI GTATCC 1 cut(s) 763
BclI TGATCA 1 cut(s) 1039
BcoDI GTCTC 2 cut(s) 432, 943
BfaI CTAG 2 cut(s) 585, 978
BfmI CTRYAG 4 cut(s) 576, 603, 755, 1050
BfuAI ACCTGC 1 cut(s) 569
BfuI GTATCC 1 cut(s) 763
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 6 cut(s) 239, 600, 603, 606, 975, 1323
BlsI GCNGC 6 cut(s) 240, 601, 604, 607, 976, 1324
Bme1390I CCNGG 3 cut(s) 175, 767, 1503
BmeT110I CYCGRG 1 cut(s) 1478
BmiI GGNNCC 1 cut(s) 510
BmrFI CCNGG 3 cut(s) 175, 767, 1503
BmsI GCATC 7 cut(s) 307, 907, 1089, 1181, 1309, 1326, 1456
BpiI GAAGAC 1 cut(s) 851
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 2 cut(s) 90, 527
BpuEI CTTGAG 3 cut(s) 214, 532, 579
BsaAI YACGTR 1 cut(s) 1328
BsaJI CCNNGG 2 cut(s) 688, 1006
BsaWI WCCGGW 1 cut(s) 1166
Bsc4I CCNNNNNNNGG 2 cut(s) 830, 1508
Bse118I RCCGGY 2 cut(s) 830, 928
Bse1I ACTGG 2 cut(s) 510, 941
BseBI CCWGG 3 cut(s) 175, 767, 1503
BseDI CCNNGG 2 cut(s) 688, 1006
BseGI GGATG 4 cut(s) 304, 1267, 1324, 1511
BseLI CCNNNNNNNGG 2 cut(s) 830, 1508
BseMII CTCAG 1 cut(s) 350
BseNI ACTGG 2 cut(s) 510, 941
BseRI GAGGAG 1 cut(s) 217
BseSI GKGCMC 2 cut(s) 1333, 1411
BseXI GCAGC 4 cut(s) 589, 617, 961, 1309
BsgI GTGCAG 2 cut(s) 44, 1308
Bsh1236I CGCG 1 cut(s) 964
BshFI GGCC 5 cut(s) 178, 687, 707, 889, 1005
BsiHKAI GWGCWC 1 cut(s) 1333
BsiHKCI CYCGRG 1 cut(s) 1478
BsiSI CCGG 3 cut(s) 831, 929, 1167
BslFI GGGAC 2 cut(s) 572, 1154
BslI CCNNNNNNNGG 2 cut(s) 830, 1508
BsmAI GTCTC 2 cut(s) 432, 943
BsmBI CGTCTC 1 cut(s) 432
BsmFI GGGAC 2 cut(s) 572, 1154
BsnI GGCC 5 cut(s) 178, 687, 707, 889, 1005
BsoBI CYCGRG 1 cut(s) 1478
Bsp1286I GDGCHC 2 cut(s) 1333, 1411
Bsp143I GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
BspACI CCGC 3 cut(s) 238, 600, 1412
BspANI GGCC 5 cut(s) 178, 687, 707, 889, 1005
BspCNI CTCAG 1 cut(s) 351
BspFNI CGCG 1 cut(s) 964
BspLI GGNNCC 1 cut(s) 510
BspMAI CTGCAG 3 cut(s) 580, 607, 1054
BspMI ACCTGC 1 cut(s) 569
BspPI GGATC 2 cut(s) 392, 1469
BsrFI RCCGGY 2 cut(s) 830, 928
BsrI ACTGG 2 cut(s) 510, 941
BssAI RCCGGY 2 cut(s) 830, 928
BssECI CCNNGG 2 cut(s) 688, 1006
BssMI GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
BssSI CACGAG 1 cut(s) 1404
BssT1I CCWWGG 1 cut(s) 688
Bst2BI CACGAG 1 cut(s) 1404
Bst2UI CCWGG 3 cut(s) 175, 767, 1503
Bst4CI ACNGT 5 cut(s) 137, 417, 489, 563, 1497
Bst6I CTCTTC 1 cut(s) 941
BstBAI YACGTR 1 cut(s) 1328
BstC8I GCNNGC 4 cut(s) 236, 365, 630, 1292
BstDEI CTNAG 1 cut(s) 359
BstF5I GGATG 4 cut(s) 304, 1267, 1324, 1511
BstFNI CGCG 1 cut(s) 964
BstKTI GATC 5 cut(s) 400, 1015, 1042, 1072, 1477
BstMAI GTCTC 2 cut(s) 432, 943
BstMBI GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
BstMWI GCNNNNNNNGC 5 cut(s) 244, 605, 895, 1287, 1328
BstNI CCWGG 3 cut(s) 175, 767, 1503
BstSCI CCNGG 3 cut(s) 173, 765, 1501
BstSFI CTRYAG 4 cut(s) 576, 603, 755, 1050
BstSLI GKGCMC 2 cut(s) 1333, 1411
BstUI CGCG 1 cut(s) 964
BstV1I GCAGC 4 cut(s) 589, 617, 961, 1309
BstV2I GAAGAC 1 cut(s) 851
BstX2I RGATCY 2 cut(s) 397, 1069
BstYI RGATCY 2 cut(s) 397, 1069
BsuI GTATCC 1 cut(s) 763
BsuRI GGCC 5 cut(s) 178, 687, 707, 889, 1005
BtsCI GGATG 4 cut(s) 304, 1267, 1324, 1511
BtsIMutI CAGTG 4 cut(s) 133, 209, 356, 1331
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 4 cut(s) 236, 365, 630, 1292
Cfr10I RCCGGY 2 cut(s) 830, 928
CseI GACGC 1 cut(s) 1472
Csp6I GTAC 5 cut(s) 329, 655, 798, 1125, 1428
CviQI GTAC 5 cut(s) 329, 655, 798, 1125, 1428
DdeI CTNAG 1 cut(s) 359
DpnI GATC 5 cut(s) 399, 1014, 1041, 1071, 1476
DpnII GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
EaeI YGGCCR 2 cut(s) 176, 685
Eam1104I CTCTTC 1 cut(s) 941
EarI CTCTTC 1 cut(s) 941
Eco130I CCWWGG 1 cut(s) 688
Eco147I AGGCCT 1 cut(s) 889
Eco32I GATATC 1 cut(s) 222
Eco57I CTGAAG 1 cut(s) 428
Eco72I CACGTG 1 cut(s) 1328
Eco88I CYCGRG 1 cut(s) 1478
EcoRII CCWGG 3 cut(s) 173, 765, 1501
EcoRV GATATC 1 cut(s) 222
EcoT14I CCWWGG 1 cut(s) 688
EcoT22I ATGCAT 1 cut(s) 900
ErhI CCWWGG 1 cut(s) 688
Esp3I CGTCTC 1 cut(s) 432
FalI AAGNNNNNCTT 4 cut(s) 660, 692, 1191, 1223
FaqI GGGAC 2 cut(s) 572, 1154
FauI CCCGC 1 cut(s) 1419
FbaI TGATCA 1 cut(s) 1039
Fnu4HI GCNGC 6 cut(s) 239, 600, 603, 606, 975, 1323
FokI GGATG 4 cut(s) 311, 1274, 1331, 1518
Fsp4HI GCNGC 6 cut(s) 239, 600, 603, 606, 975, 1323
FspBI CTAG 2 cut(s) 585, 978
GluI GCNGC 6 cut(s) 239, 600, 603, 606, 975, 1323
GsuI CTGGAG 2 cut(s) 90, 527
HaeIII GGCC 5 cut(s) 178, 687, 707, 889, 1005
HapII CCGG 3 cut(s) 831, 929, 1167
HgaI GACGC 1 cut(s) 1472
HincII GTYRAC 2 cut(s) 745, 1493
HindII GTYRAC 2 cut(s) 745, 1493
HindIII AAGCTT 2 cut(s) 674, 1279
HinfI GANTC 4 cut(s) 199, 268, 422, 638
HpaII CCGG 3 cut(s) 831, 929, 1167
HphI GGTGA 1 cut(s) 1156
Hpy166II GTNNAC 3 cut(s) 745, 1331, 1493
Hpy188I TCNGA 4 cut(s) 95, 421, 1010, 1187
Hpy188III TCNNGA 7 cut(s) 107, 157, 395, 585, 642, 839, 1478
Hpy8I GTNNAC 3 cut(s) 745, 1331, 1493
HpyAV CCTTC 9 cut(s) 23, 53, 644, 718, 879, 1169, 1280, 1301, 1363
HpyCH4III ACNGT 5 cut(s) 137, 417, 489, 563, 1497
HpyCH4IV ACGT 1 cut(s) 1327
HpyF10VI GCNNNNNNNGC 5 cut(s) 244, 605, 895, 1287, 1328
HpyF3I CTNAG 1 cut(s) 359
HpySE526I ACGT 1 cut(s) 1327
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
LmnI GCTCC 2 cut(s) 508, 1511
Lsp1109I GCAGC 4 cut(s) 589, 617, 961, 1309
LweI GCATC 7 cut(s) 307, 907, 1089, 1181, 1309, 1326, 1456
MaeI CTAG 2 cut(s) 585, 978
MaeII ACGT 1 cut(s) 1327
MaeIII GTNAC 3 cut(s) 489, 1162, 1310
MalI GATC 5 cut(s) 399, 1014, 1041, 1071, 1476
MboI GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
MflI RGATCY 2 cut(s) 397, 1069
MhlI GDGCHC 2 cut(s) 1333, 1411
MlsI TGGCCA 2 cut(s) 178, 687
MluCI AATT 7 cut(s) 126, 163, 306, 499, 728, 1035, 1273
MluNI TGGCCA 2 cut(s) 178, 687
MlyI GAGTC 2 cut(s) 262, 416
MmeI TCCRAC 1 cut(s) 195
Mox20I TGGCCA 2 cut(s) 178, 687
Mph1103I ATGCAT 1 cut(s) 900
MroXI GAANNNNTTC 2 cut(s) 1059, 1446
MscI TGGCCA 2 cut(s) 178, 687
MseI TTAA 8 cut(s) 6, 114, 162, 189, 621, 849, 1034, 1277
MslI CAYNNNNRTG 2 cut(s) 336, 1169
Msp20I TGGCCA 2 cut(s) 178, 687
MspA1I CMGCKG 1 cut(s) 602
MspI CCGG 3 cut(s) 831, 929, 1167
MspR9I CCNGG 3 cut(s) 175, 767, 1503
MvaI CCWGG 3 cut(s) 175, 767, 1503
MvnI CGCG 1 cut(s) 964
MwoI GCNNNNNNNGC 5 cut(s) 244, 605, 895, 1287, 1328
NdeII GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
NlaIV GGNNCC 1 cut(s) 510
NmuCI GTSAC 1 cut(s) 1162
NsiI ATGCAT 1 cut(s) 900
OliI CACNNNNGTG 1 cut(s) 1169
PceI AGGCCT 1 cut(s) 889
PcsI WCGNNNNNNNCGW 1 cut(s) 431
PdmI GAANNNNTTC 2 cut(s) 1059, 1446
PfeI GAWTC 2 cut(s) 199, 638
PfoI TCCNGGA 1 cut(s) 1501
PkrI GCNGC 6 cut(s) 240, 601, 604, 607, 976, 1324
PleI GAGTC 2 cut(s) 262, 416
PmaCI CACGTG 1 cut(s) 1328
PmlI CACGTG 1 cut(s) 1328
PpsI GAGTC 2 cut(s) 262, 416
Ppu21I YACGTR 1 cut(s) 1328
PshBI ATTAAT 2 cut(s) 162, 189
Psp6I CCWGG 3 cut(s) 173, 765, 1501
PspCI CACGTG 1 cut(s) 1328
PspGI CCWGG 3 cut(s) 173, 765, 1501
PspN4I GGNNCC 1 cut(s) 510
PstI CTGCAG 3 cut(s) 580, 607, 1054
PsuI RGATCY 2 cut(s) 397, 1069
RsaI GTAC 5 cut(s) 330, 656, 799, 1126, 1429
RsaNI GTAC 5 cut(s) 329, 655, 798, 1125, 1428
RseI CAYNNNNRTG 2 cut(s) 336, 1169
SaqAI TTAA 8 cut(s) 6, 114, 162, 189, 621, 849, 1034, 1277
SatI GCNGC 6 cut(s) 239, 600, 603, 606, 975, 1323
Sau3AI GATC 5 cut(s) 397, 1012, 1039, 1069, 1474
SchI GAGTC 2 cut(s) 262, 416
ScrFI CCNGG 3 cut(s) 175, 767, 1503
SduI GDGCHC 2 cut(s) 1333, 1411
SfaNI GCATC 7 cut(s) 307, 907, 1089, 1181, 1309, 1326, 1456
SfcI CTRYAG 4 cut(s) 576, 603, 755, 1050
SmiMI CAYNNNNRTG 2 cut(s) 336, 1169
SmlI CTYRAG 3 cut(s) 229, 547, 594
SmoI CTYRAG 3 cut(s) 229, 547, 594
Sse9I AATT 7 cut(s) 126, 163, 306, 499, 728, 1035, 1273
SseBI AGGCCT 1 cut(s) 889
SsiI CCGC 3 cut(s) 238, 600, 1412
SspMI CTAG 2 cut(s) 585, 978
StuI AGGCCT 1 cut(s) 889
StyD4I CCNGG 3 cut(s) 173, 765, 1501
StyI CCWWGG 1 cut(s) 688
TaaI ACNGT 5 cut(s) 137, 417, 489, 563, 1497
TaiI ACGT 1 cut(s) 1330
TaqI TCGA 4 cut(s) 434, 636, 1015, 1355
TasI AATT 7 cut(s) 126, 163, 306, 499, 728, 1035, 1273
TatI WGTACW 1 cut(s) 1124
TauI GCSGC 2 cut(s) 241, 602
TfiI GAWTC 2 cut(s) 199, 638
Tru1I TTAA 8 cut(s) 6, 114, 162, 189, 621, 849, 1034, 1277
Tru9I TTAA 8 cut(s) 6, 114, 162, 189, 621, 849, 1034, 1277
TscAI CASTG 4 cut(s) 140, 209, 363, 1338
TseFI GTSAC 1 cut(s) 1162
TseI GCWGC 4 cut(s) 602, 605, 974, 1322
Tsp45I GTSAC 1 cut(s) 1162
TspDTI ATGAA 8 cut(s) 138, 512, 945, 1040, 1314, 1320, 1379, 1409
TspGWI ACGGA 3 cut(s) 289, 496, 1274
TspRI CASTG 4 cut(s) 140, 209, 363, 1338
VneI GTGCAC 1 cut(s) 1329
VspI ATTAAT 2 cut(s) 162, 189
XapI RAATTY 4 cut(s) 126, 306, 499, 1273
XbaI TCTAGA 1 cut(s) 584
XmnI GAANNNNTTC 2 cut(s) 1059, 1446
XspI CTAG 2 cut(s) 585, 978
Zsp2I ATGCAT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.