Serine threonine-protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35075 |
| fragaria_vesca | FvH4_2g07370 FvH4_2g07370 |
| malus_domestica | MD10G1086500.v1.1 MD14G1180200.v1.1 |
| prunus_persica | Prupe.8G112500_v2.0.a1 |
| pyrus_communis | pycom10g06870 |
| rosa_chinensis | RchiOBHm_Chr6g0260251 RchiOBHm_Chr6g0260261 RchiOBHm_Chr6g0260791 |
| rosa_laevigata | RLG00000014485 |
| rosa_multiflora | Rmu_co8055024.1_g000001 Rmu_co8166074.1_g000001 Rmu_sc0014629.1_g000010 Rmu_sc0023276.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00207390 |
| rosa_rugosa | Rorug05G0592900 |
| rosa_samantha | Rh6AG109300 Rh6AG110500 Rh6AG112300 Rh6BG106200 Rh6CG097700 Rh6CG098100 Rh6CG102000 Rh6CG102200 Rh6CG103000 Rh6DG091700 Rh6DG093600 Rh6DG093900 Rh6DG094300 |
| rosa_wichuraiana | Rw6G009500 Rw6G009940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 677 |
| AarI | CACCTGC | 1 cut(s) | 9334 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3310 |
| Acc16I | TGCGCA | 3 cut(s) | 7242, 8666, 8724 |
| Acc36I | ACCTGC | 3 cut(s) | 1706, 5176, 9334 |
| Acc65I | GGTACC | 1 cut(s) | 643 |
| AccB1I | GGYRCC | 5 cut(s) | 643, 2383, 3673, 4807, 6785 |
| AccB7I | CCANNNNNTGG | 7 cut(s) | 1108, 3228, 4170, 5903, 6212, 6238, 8252 |
| AccBSI | CCGCTC | 2 cut(s) | 110, 7529 |
| AccI | GTMKAC | 5 cut(s) | 2793, 4457, 5316, 7034, 7103 |
| AccII | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| AcoI | YGGCCR | 8 cut(s) | 1531, 3753, 4981, 5289, 5730, 6214, 9846, 9875 |
| AcyI | GRCGYC | 1 cut(s) | 5788 |
| AdeI | CACNNNGTG | 3 cut(s) | 3434, 3847, 4814 |
| AflII | CTTAAG | 1 cut(s) | 1690 |
| AflIII | ACRYGT | 1 cut(s) | 6369 |
| AgeI | ACCGGT | 1 cut(s) | 10383 |
| AhlI | ACTAGT | 2 cut(s) | 7187, 7486 |
| AjiI | CACGTC | 2 cut(s) | 2450, 5998 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 588, 620, 2397, 2429, 6798, 6830 |
| AleI | CACNNNNGTG | 2 cut(s) | 2958, 5507 |
| Alw44I | GTGCAC | 1 cut(s) | 7802 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 5762, 5930, 7823, 8530 |
| Ama87I | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| ApaI | GGGCCC | 1 cut(s) | 9253 |
| ApaLI | GTGCAC | 1 cut(s) | 7802 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2024, 2056 |
| AseI | ATTAAT | 3 cut(s) | 3492, 7347, 8109 |
| AsiGI | ACCGGT | 1 cut(s) | 10383 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 8334, 9117, 9261, 9670 |
| Asp718I | GGTACC | 1 cut(s) | 643 |
| AspA2I | CCTAGG | 2 cut(s) | 2614, 4411 |
| AsuC2I | CCSGG | 5 cut(s) | 3831, 3832, 6218, 9831, 9845 |
| AsuII | TTCGAA | 1 cut(s) | 10268 |
| AsuNHI | GCTAGC | 1 cut(s) | 9161 |
| AvaI | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| AvrII | CCTAGG | 2 cut(s) | 2614, 4411 |
| BaeGI | GKGCMC | 3 cut(s) | 4810, 7806, 9253 |
| BalI | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| BamHI | GGATCC | 2 cut(s) | 2400, 7308 |
| BanI | GGYRCC | 5 cut(s) | 643, 2383, 3673, 4807, 6785 |
| BanII | GRGCYC | 4 cut(s) | 2982, 3585, 5370, 9253 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 9580, 9612 |
| BauI | CACGAG | 4 cut(s) | 5429, 6981, 9718, 9807 |
| BbsI | GAAGAC | 8 cut(s) | 319, 1664, 2718, 4827, 7672, 9528, 9987, 10266 |
| BbvCI | CCTCAGC | 1 cut(s) | 2322 |
| BceAI | ACGGC | 6 cut(s) | 355, 439, 2423, 2615, 3104, 7725 |
| BciVI | GTATCC | 2 cut(s) | 4130, 8931 |
| BclI | TGATCA | 2 cut(s) | 7123, 9226 |
| BcnI | CCSGG | 5 cut(s) | 3831, 3832, 6218, 9831, 9845 |
| BcuI | ACTAGT | 2 cut(s) | 7187, 7486 |
| BfoI | RGCGCY | 2 cut(s) | 368, 393 |
| BfrI | CTTAAG | 1 cut(s) | 1690 |
| BfuAI | ACCTGC | 3 cut(s) | 1706, 5176, 9334 |
| BfuI | GTATCC | 2 cut(s) | 4130, 8931 |
| BglI | GCCNNNNNGGC | 4 cut(s) | 5621, 5816, 8247, 8618 |
| BglII | AGATCT | 7 cut(s) | 4869, 5494, 6091, 7133, 8354, 9837, 10198 |
| BlnI | CCTAGG | 2 cut(s) | 2614, 4411 |
| BlpI | GCTNAGC | 3 cut(s) | 377, 5480, 7794 |
| BmeT110I | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| BmgBI | CACGTC | 2 cut(s) | 2450, 5998 |
| BmrI | ACTGGG | 1 cut(s) | 3246 |
| BmtI | GCTAGC | 1 cut(s) | 9165 |
| BmuI | ACTGGG | 1 cut(s) | 3246 |
| BoxI | GACNNNNGTC | 3 cut(s) | 5058, 5943, 7849 |
| BpiI | GAAGAC | 8 cut(s) | 319, 1664, 2718, 4827, 7672, 9528, 9987, 10266 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 509, 541, 2873, 2905, 4959, 4991, 8582, 8614 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2322, 2981, 5244, 7437 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 377, 5480, 7794 |
| Bpu14I | TTCGAA | 1 cut(s) | 10268 |
| BpuEI | CTTGAG | 9 cut(s) | 530, 550, 2731, 4810, 4977, 7082, 7257, 8036, 9635 |
| BpuMI | CCSGG | 5 cut(s) | 3831, 3832, 6218, 9831, 9845 |
| BsaAI | YACGTR | 2 cut(s) | 3359, 7325 |
| BsaBI | GATNNNNATC | 3 cut(s) | 943, 4394, 6538 |
| BsaHI | GRCGYC | 1 cut(s) | 5788 |
| BsaI | GGTCTC | 2 cut(s) | 5951, 9831 |
| BsaWI | WCCGGW | 3 cut(s) | 646, 9822, 10383 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bse118I | RCCGGY | 1 cut(s) | 10383 |
| Bse8I | GATNNNNATC | 3 cut(s) | 943, 4394, 6538 |
| BseJI | GATNNNNATC | 3 cut(s) | 943, 4394, 6538 |
| BseSI | GKGCMC | 3 cut(s) | 4810, 7806, 9253 |
| BseYI | CCCAGC | 3 cut(s) | 3446, 4358, 7412 |
| BsgI | GTGCAG | 5 cut(s) | 1229, 4719, 5529, 7007, 7611 |
| Bsh1236I | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| BshNI | GGYRCC | 5 cut(s) | 643, 2383, 3673, 4807, 6785 |
| BshTI | ACCGGT | 1 cut(s) | 10383 |
| BsiHKCI | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| BsiSI | CCGG | 9 cut(s) | 393, 647, 3831, 6097, 6217, 9823, 9830, 9845, 10384 |
| BslFI | GGGAC | 7 cut(s) | 415, 2245, 4383, 4957, 6887, 6986, 7712 |
| BsmFI | GGGAC | 7 cut(s) | 415, 2245, 4383, 4957, 6887, 6986, 7712 |
| BsmI | GAATGC | 8 cut(s) | 1396, 2658, 2920, 5344, 6148, 8710, 9898, 10163 |
| Bso31I | GGTCTC | 2 cut(s) | 5951, 9831 |
| BsoBI | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| Bsp119I | TTCGAA | 1 cut(s) | 10268 |
| Bsp120I | GGGCCC | 1 cut(s) | 9249 |
| Bsp1407I | TGTACA | 2 cut(s) | 2086, 3340 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 377, 5480, 7794 |
| BspFNI | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| BspHI | TCATGA | 8 cut(s) | 2221, 3118, 4191, 5686, 6445, 6907, 7018, 9706 |
| BspMAI | CTGCAG | 5 cut(s) | 2426, 3070, 4110, 8362, 10240 |
| BspMI | ACCTGC | 3 cut(s) | 1706, 5176, 9334 |
| BspOI | GCTAGC | 1 cut(s) | 9165 |
| BspQI | GCTCTTC | 5 cut(s) | 48, 63, 4670, 8139, 9077 |
| BspT104I | TTCGAA | 1 cut(s) | 10268 |
| BspT107I | GGYRCC | 5 cut(s) | 643, 2383, 3673, 4807, 6785 |
| BspTI | CTTAAG | 1 cut(s) | 1690 |
| BspTNI | GGTCTC | 2 cut(s) | 5951, 9831 |
| BsrBI | CCGCTC | 2 cut(s) | 110, 7529 |
| BsrFI | RCCGGY | 1 cut(s) | 10383 |
| BsrGI | TGTACA | 2 cut(s) | 2086, 3340 |
| BssAI | RCCGGY | 1 cut(s) | 10383 |
| BssNAI | GTATAC | 1 cut(s) | 2794 |
| BssNI | GRCGYC | 1 cut(s) | 5788 |
| BssSI | CACGAG | 4 cut(s) | 5429, 6981, 9718, 9807 |
| Bst1107I | GTATAC | 1 cut(s) | 2794 |
| Bst2BI | CACGAG | 4 cut(s) | 5429, 6981, 9718, 9807 |
| BstACI | GRCGYC | 1 cut(s) | 5788 |
| BstAFI | CTTAAG | 1 cut(s) | 1690 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 266, 3503, 5552, 6124 |
| BstAUI | TGTACA | 2 cut(s) | 2086, 3340 |
| BstBAI | YACGTR | 2 cut(s) | 3359, 7325 |
| BstBI | TTCGAA | 1 cut(s) | 10268 |
| BstDSI | CCRYGG | 2 cut(s) | 405, 5195 |
| BstEII | GGTNACC | 2 cut(s) | 2347, 5206 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 197, 9257 |
| BstFNI | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| BstH2I | RGCGCY | 2 cut(s) | 368, 393 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 5058, 5943, 7849 |
| BstPI | GGTNACC | 2 cut(s) | 2347, 5206 |
| BstSLI | GKGCMC | 3 cut(s) | 4810, 7806, 9253 |
| BstSNI | TACGTA | 1 cut(s) | 7325 |
| BstUI | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| BstV2I | GAAGAC | 8 cut(s) | 319, 1664, 2718, 4827, 7672, 9528, 9987, 10266 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1142, 1409, 6592 |
| BstZ17I | GTATAC | 1 cut(s) | 2794 |
| BsuI | GTATCC | 2 cut(s) | 4130, 8931 |
| BtgI | CCRYGG | 2 cut(s) | 405, 5195 |
| BtrI | CACGTC | 2 cut(s) | 2450, 5998 |
| BtsI | GCAGTG | 7 cut(s) | 858, 1113, 2294, 3583, 3775, 4692, 10329 |
| BveI | ACCTGC | 3 cut(s) | 1706, 5176, 9334 |
| CaiI | CAGNNNCTG | 4 cut(s) | 5762, 5930, 7823, 8530 |
| CciI | TCATGA | 8 cut(s) | 2221, 3118, 4191, 5686, 6445, 6907, 7018, 9706 |
| Cfr10I | RCCGGY | 1 cut(s) | 10383 |
| Cfr42I | CCGCGG | 1 cut(s) | 408 |
| Cfr9I | CCCGGG | 1 cut(s) | 3830 |
| CseI | GACGC | 3 cut(s) | 5777, 7089, 7190 |
| CsiI | ACCWGGT | 1 cut(s) | 4810 |
| CspAI | ACCGGT | 1 cut(s) | 10383 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3666, 3701 |
| DraI | TTTAAA | 5 cut(s) | 1152, 3006, 4035, 8013, 8284 |
| DraIII | CACNNNGTG | 3 cut(s) | 3434, 3847, 4814 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3310 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3310 |
| EaeI | YGGCCR | 8 cut(s) | 1531, 3753, 4981, 5289, 5730, 6214, 9846, 9875 |
| EciI | GGCGGA | 3 cut(s) | 172, 6725, 8600 |
| Ecl136II | GAGCTC | 3 cut(s) | 2980, 3583, 5368 |
| Eco105I | TACGTA | 1 cut(s) | 7325 |
| Eco147I | AGGCCT | 3 cut(s) | 12, 7253, 9511 |
| Eco24I | GRGCYC | 4 cut(s) | 2982, 3585, 5370, 9253 |
| Eco31I | GGTCTC | 2 cut(s) | 5951, 9831 |
| Eco32I | GATATC | 1 cut(s) | 9913 |
| Eco53kI | GAGCTC | 3 cut(s) | 2980, 3583, 5368 |
| Eco88I | CYCGRG | 5 cut(s) | 629, 2456, 3830, 7230, 9275 |
| Eco91I | GGTNACC | 2 cut(s) | 2347, 5206 |
| EcoICRI | GAGCTC | 3 cut(s) | 2980, 3583, 5368 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 197, 9257 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1360, 4370, 4415, 6874, 9249, 9250, 10180 |
| EcoO65I | GGTNACC | 2 cut(s) | 2347, 5206 |
| EcoRI | GAATTC | 2 cut(s) | 9281, 9690 |
| EcoRV | GATATC | 1 cut(s) | 9913 |
| EcoT22I | ATGCAT | 9 cut(s) | 2167, 2212, 2803, 4134, 5785, 8165, 8392, 9023, 9411 |
| EcoT38I | GRGCYC | 4 cut(s) | 2982, 3585, 5370, 9253 |
| FaqI | GGGAC | 7 cut(s) | 415, 2245, 4383, 4957, 6887, 6986, 7712 |
| FauI | CCCGC | 2 cut(s) | 452, 4007 |
| FauNDI | CATATG | 4 cut(s) | 262, 2803, 3859, 10117 |
| FbaI | TGATCA | 2 cut(s) | 7123, 9226 |
| FblI | GTMKAC | 5 cut(s) | 2793, 4457, 5316, 7034, 7103 |
| FriOI | GRGCYC | 4 cut(s) | 2982, 3585, 5370, 9253 |
| FspI | TGCGCA | 3 cut(s) | 7242, 8666, 8724 |
| GsaI | CCCAGC | 3 cut(s) | 3450, 4362, 7416 |
| HaeII | RGCGCY | 2 cut(s) | 368, 393 |
| HapII | CCGG | 9 cut(s) | 393, 647, 3831, 6097, 6217, 9823, 9830, 9845, 10384 |
| HgaI | GACGC | 3 cut(s) | 5777, 7089, 7190 |
| Hin1I | GRCGYC | 1 cut(s) | 5788 |
| HincII | GTYRAC | 5 cut(s) | 346, 1674, 2453, 3162, 5053 |
| HindII | GTYRAC | 5 cut(s) | 346, 1674, 2453, 3162, 5053 |
| HindIII | AAGCTT | 8 cut(s) | 7361, 8308, 8953, 9092, 9576, 9882, 9953, 10315 |
| HpaI | GTTAAC | 1 cut(s) | 1674 |
| HpaII | CCGG | 9 cut(s) | 393, 647, 3831, 6097, 6217, 9823, 9830, 9845, 10384 |
| Hpy99I | CGWCG | 5 cut(s) | 56, 98, 101, 5652, 7184 |
| Hsp92I | GRCGYC | 1 cut(s) | 5788 |
| KflI | GGGWCCC | 2 cut(s) | 4370, 6874 |
| KpnI | GGTACC | 1 cut(s) | 647 |
| Ksp22I | TGATCA | 2 cut(s) | 7123, 9226 |
| KspAI | GTTAAC | 1 cut(s) | 1674 |
| KspI | CCGCGG | 1 cut(s) | 408 |
| LguI | GCTCTTC | 5 cut(s) | 48, 63, 4670, 8139, 9077 |
| MabI | ACCWGGT | 1 cut(s) | 4810 |
| MbiI | CCGCTC | 2 cut(s) | 110, 7529 |
| MfeI | CAATTG | 8 cut(s) | 5216, 5867, 6921, 7809, 8198, 8421, 8832, 8853 |
| MlsI | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| MluNI | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| Mox20I | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| Mph1103I | ATGCAT | 9 cut(s) | 2167, 2212, 2803, 4134, 5785, 8165, 8392, 9023, 9411 |
| MroXI | GAANNNNTTC | 4 cut(s) | 8334, 9117, 9261, 9670 |
| MscI | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| Msp20I | TGGCCA | 3 cut(s) | 1533, 4983, 5291 |
| MspA1I | CMGCKG | 7 cut(s) | 407, 6350, 7046, 7621, 8021, 8530, 9602 |
| MspCI | CTTAAG | 1 cut(s) | 1690 |
| MspI | CCGG | 9 cut(s) | 393, 647, 3831, 6097, 6217, 9823, 9830, 9845, 10384 |
| MssI | GTTTAAAC | 1 cut(s) | 4035 |
| MunI | CAATTG | 8 cut(s) | 5216, 5867, 6921, 7809, 8198, 8421, 8832, 8853 |
| Mva1269I | GAATGC | 8 cut(s) | 1396, 2658, 2920, 5344, 6148, 8710, 9898, 10163 |
| MvnI | CGCG | 5 cut(s) | 141, 407, 824, 5603, 7100 |
| NciI | CCSGG | 5 cut(s) | 3831, 3832, 6218, 9831, 9845 |
| NdeI | CATATG | 4 cut(s) | 262, 2803, 3859, 10117 |
| NheI | GCTAGC | 1 cut(s) | 9161 |
| NsbI | TGCGCA | 3 cut(s) | 7242, 8666, 8724 |
| NsiI | ATGCAT | 9 cut(s) | 2167, 2212, 2803, 4134, 5785, 8165, 8392, 9023, 9411 |
| NspV | TTCGAA | 1 cut(s) | 10268 |
| OliI | CACNNNNGTG | 2 cut(s) | 2958, 5507 |
| PaeI | GCATGC | 6 cut(s) | 498, 3446, 3552, 4136, 4254, 8774 |
| PaeR7I | CTCGAG | 3 cut(s) | 2456, 7230, 9275 |
| PagI | TCATGA | 8 cut(s) | 2221, 3118, 4191, 5686, 6445, 6907, 7018, 9706 |
| PaqCI | CACCTGC | 1 cut(s) | 9334 |
| PasI | CCCWGGG | 2 cut(s) | 199, 1396 |
| PceI | AGGCCT | 3 cut(s) | 12, 7253, 9511 |
| PciI | ACATGT | 1 cut(s) | 6369 |
| PciSI | GCTCTTC | 5 cut(s) | 48, 63, 4670, 8139, 9077 |
| PctI | GAATGC | 8 cut(s) | 1396, 2658, 2920, 5344, 6148, 8710, 9898, 10163 |
| PdmI | GAANNNNTTC | 4 cut(s) | 8334, 9117, 9261, 9670 |
| PflMI | CCANNNNNTGG | 7 cut(s) | 1108, 3228, 4170, 5903, 6212, 6238, 8252 |
| PfoI | TCCNGGA | 2 cut(s) | 4487, 9829 |
| PinAI | ACCGGT | 1 cut(s) | 10383 |
| PmeI | GTTTAAAC | 1 cut(s) | 4035 |
| Ppu21I | YACGTR | 2 cut(s) | 3359, 7325 |
| PpuMI | RGGWCCY | 5 cut(s) | 1360, 4370, 4415, 6874, 10180 |
| PscI | ACATGT | 1 cut(s) | 6369 |
| PshAI | GACNNNNGTC | 3 cut(s) | 5058, 5943, 7849 |
| PshBI | ATTAAT | 3 cut(s) | 3492, 7347, 8109 |
| PsiI | TTATAA | 1 cut(s) | 677 |
| Psp124BI | GAGCTC | 3 cut(s) | 2982, 3585, 5370 |
| Psp5II | RGGWCCY | 5 cut(s) | 1360, 4370, 4415, 6874, 10180 |
| PspEI | GGTNACC | 2 cut(s) | 2347, 5206 |
| PspFI | CCCAGC | 3 cut(s) | 3446, 4358, 7412 |
| PspOMI | GGGCCC | 1 cut(s) | 9249 |
| PspPPI | RGGWCCY | 5 cut(s) | 1360, 4370, 4415, 6874, 10180 |
| PspXI | VCTCGAGB | 2 cut(s) | 2456, 9275 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1979, 2011 |
| PstI | CTGCAG | 5 cut(s) | 2426, 3070, 4110, 8362, 10240 |
| PstNI | CAGNNNCTG | 4 cut(s) | 5762, 5930, 7823, 8530 |
| PvuII | CAGCTG | 6 cut(s) | 6350, 7046, 7621, 8021, 8530, 9602 |
| SacI | GAGCTC | 3 cut(s) | 2982, 3585, 5370 |
| SacII | CCGCGG | 1 cut(s) | 408 |
| SapI | GCTCTTC | 5 cut(s) | 48, 63, 4670, 8139, 9077 |
| SexAI | ACCWGGT | 1 cut(s) | 4810 |
| Sfr274I | CTCGAG | 3 cut(s) | 2456, 7230, 9275 |
| Sfr303I | CCGCGG | 1 cut(s) | 408 |
| SfuI | TTCGAA | 1 cut(s) | 10268 |
| SgrBI | CCGCGG | 1 cut(s) | 408 |
| SlaI | CTCGAG | 3 cut(s) | 2456, 7230, 9275 |
| SmaI | CCCGGG | 1 cut(s) | 3832 |
| SnaBI | TACGTA | 1 cut(s) | 7325 |
| SpeI | ACTAGT | 2 cut(s) | 7187, 7486 |
| SphI | GCATGC | 6 cut(s) | 498, 3446, 3552, 4136, 4254, 8774 |
| SseBI | AGGCCT | 3 cut(s) | 12, 7253, 9511 |
| SspI | AATATT | 3 cut(s) | 4786, 4891, 10018 |
| SstI | GAGCTC | 3 cut(s) | 2982, 3585, 5370 |
| StuI | AGGCCT | 3 cut(s) | 12, 7253, 9511 |
| TaqII | GACCGA | 2 cut(s) | 2826, 7857 |
| TatI | WGTACW | 6 cut(s) | 1818, 2086, 3340, 5527, 6063, 9787 |
| TauI | GCSGC | 7 cut(s) | 122, 3733, 3758, 5603, 7529, 9727, 9880 |
| TspGWI | ACGGA | 3 cut(s) | 40, 5272, 7196 |
| TspMI | CCCGGG | 1 cut(s) | 3830 |
| Van91I | CCANNNNNTGG | 7 cut(s) | 1108, 3228, 4170, 5903, 6212, 6238, 8252 |
| Vha464I | CTTAAG | 1 cut(s) | 1690 |
| VneI | GTGCAC | 1 cut(s) | 7802 |
| VspI | ATTAAT | 3 cut(s) | 3492, 7347, 8109 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 197, 9257 |
| XbaI | TCTAGA | 1 cut(s) | 584 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 329, 3703, 5378, 6592, 8249 |
| XhoI | CTCGAG | 3 cut(s) | 2456, 7230, 9275 |
| XmaI | CCCGGG | 1 cut(s) | 3830 |
| XmaJI | CCTAGG | 2 cut(s) | 2614, 4411 |
| XmiI | GTMKAC | 5 cut(s) | 2793, 4457, 5316, 7034, 7103 |
| XmnI | GAANNNNTTC | 4 cut(s) | 8334, 9117, 9261, 9670 |
| Zsp2I | ATGCAT | 9 cut(s) | 2167, 2212, 2803, 4134, 5785, 8165, 8392, 9023, 9411 |