Rh6AG109300

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0004425
Physical Location & Seq
Forward (+)
15968067 .. 15969782
1716 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG109300.1

Sequence Viewer

Length: 987 bp
ATGTGGGTCCATGAAAAAAGTAAACTATACCCAAGATTGATTCAGGATGTGCAGCTTGTGATAAATGAGCTAGGAAATGTCACTGTTCTTTGTGAGGAGCTATGGCTCAGCACACTCCAAGATCTTCACACAGATGTGACGAGGCGCATAAATGTACTGAAGGAGGAAGCTGCACGAATTGCAGAAAATATTACTCTTAGCCATAGTGAGAAGAACAAGATAAATGCTGCTAAATACTCCGCTATGATGGCTCCTATTGTTGTGGCCTCAGAACGTCGTCTGTCTTCCACATCTCGGAAACCTGAAACACCTCATGAGGTATGGTTCCATGGGGAGTATAAAGATCGGTTGAAATCAGCCATCATAGCCTTCAAGACACCTCCGGCATGTGCTACAGCACTTGGAGATGCTTGGCGTCCATTTGATACCATTGCTGCCTCCTTAGCATCTTATCAAAGGAAGTCATCAATTTGTTTAAGAGAAGTCGCACCACAATTTGCTCTACTATCATCATTTGATGTTCTAATGCCTGGTCTTGAAAAGCAAGATACAGTCTCTGAATCTGACAGAGGTCTCAGTGCTAATATCCTAGGAATTGTTACCATTGCTTCTTTCGCTGCAGATGCGGCTATCATACCAACCAAGACTAAGCCTAAGAAACTTGTTTTTCTTGGTTCTGATGGTCAAAAGTACACATATCTTTTGAAAGGCAGGGAAGATCTCCGGTTTGATGCCAGAATCATGCAGCTCTTGCAAGCTATCAACTGTTTTCTGCATTCCTCAGTGGCAACTCATAGTCACTTTCTTGGTATTCGCTATTATTCTGTGACTCCAATTAGTGGCCGGGCTGGTCTTATCCAGTGGGTGGGTAATGTGATTAGTATATACAGTGTCTTTAAGTCTTGGCAAAACCGCATCCAACTAGCGCAGCTCTCAGCAGTAGGTGGTGGCAATTCAAAAGGCTCTGTTCCTCCAGCTGTTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

328

Amino Acids

36.3

Weight (kDa)

9.34

Isoelectric Point (pI)

33.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 231 - 303 1.7e-07 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 839, 865
AciI CCGC 3 cut(s) 240, 626, 913
AcoI YGGCCR 1 cut(s) 841
AcuI CTGAAG 1 cut(s) 179
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 2 cut(s) 156, 692
AfiI CCNNNNNNNGG 3 cut(s) 294, 839, 865
AgsI TTSAA 5 cut(s) 352, 373, 539, 706, 957
AjnI CCWGG 1 cut(s) 529
AleI CACNNNNGTG 1 cut(s) 134
AluBI AGCT 8 cut(s) 55, 70, 100, 170, 748, 758, 931, 977
AluI AGCT 8 cut(s) 55, 70, 100, 170, 748, 758, 931, 977
Alw26I GTCTC 2 cut(s) 559, 578
AlwNI CAGNNNCTG 1 cut(s) 557
AoxI GGCC 2 cut(s) 264, 841
ApeKI GCWGC 7 cut(s) 52, 170, 227, 434, 617, 745, 928
AspA2I CCTAGG 1 cut(s) 589
AspLEI GCGC 2 cut(s) 147, 928
AspS9I GGNCC 1 cut(s) 7
AsuC2I CCSGG 1 cut(s) 845
AvaII GGWCC 1 cut(s) 7
AvrII CCTAGG 1 cut(s) 589
BbsI GAAGAC 1 cut(s) 276
BbvI GCAGC 7 cut(s) 64, 157, 214, 421, 604, 757, 940
BccI CCATC 3 cut(s) 241, 368, 674
BciT130I CCWGG 1 cut(s) 531
BcnI CCSGG 1 cut(s) 845
BcoDI GTCTC 2 cut(s) 559, 578
BfaI CTAG 3 cut(s) 71, 590, 923
BfmI CTRYAG 2 cut(s) 393, 618
BglII AGATCT 2 cut(s) 121, 718
BisI GCNGC 8 cut(s) 53, 171, 228, 435, 618, 627, 746, 929
BlnI CCTAGG 1 cut(s) 589
BlpI GCTNAGC 1 cut(s) 107
BlsI GCNGC 8 cut(s) 54, 172, 229, 436, 619, 628, 747, 930
Bme1390I CCNGG 2 cut(s) 531, 845
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 1 cut(s) 7
BmiI GGNNCC 3 cut(s) 8, 252, 326
BmrFI CCNGG 2 cut(s) 531, 845
BmsI GCATC 5 cut(s) 397, 455, 613, 721, 924
BoxI GACNNNNGTC 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 276
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 1 cut(s) 442
Bpu1102I GCTNAGC 1 cut(s) 107
BpuMI CCSGG 1 cut(s) 845
BsaHI GRCGYC 1 cut(s) 415
BsaI GGTCTC 1 cut(s) 578
BsaJI CCNNGG 2 cut(s) 328, 589
BsaWI WCCGGW 1 cut(s) 723
Bsc4I CCNNNNNNNGG 3 cut(s) 294, 839, 865
Bse1I ACTGG 1 cut(s) 859
Bse3DI GCAATG 2 cut(s) 429, 603
BseBI CCWGG 1 cut(s) 531
BseDI CCNNGG 2 cut(s) 328, 589
BseGI GGATG 2 cut(s) 52, 915
BseLI CCNNNNNNNGG 3 cut(s) 294, 839, 865
BseMI GCAATG 2 cut(s) 429, 603
BseMII CTCAG 5 cut(s) 121, 282, 589, 795, 948
BseNI ACTGG 1 cut(s) 859
BseRI GAGGAG 1 cut(s) 110
BseXI GCAGC 7 cut(s) 64, 157, 214, 421, 604, 757, 940
BsgI GTGCAG 2 cut(s) 71, 156
BshFI GGCC 2 cut(s) 266, 843
BsiSI CCGG 3 cut(s) 383, 724, 844
BslI CCNNNNNNNGG 3 cut(s) 294, 839, 865
BsmAI GTCTC 2 cut(s) 559, 578
BsmI GAATGC 1 cut(s) 775
BsnI GGCC 2 cut(s) 266, 843
Bso31I GGTCTC 1 cut(s) 578
Bsp143I GATC 3 cut(s) 121, 343, 718
Bsp1720I GCTNAGC 1 cut(s) 107
Bsp19I CCATGG 1 cut(s) 328
BspACI CCGC 3 cut(s) 240, 626, 913
BspANI GGCC 2 cut(s) 266, 843
BspCNI CTCAG 5 cut(s) 120, 281, 588, 794, 947
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 3 cut(s) 8, 252, 326
BspMAI CTGCAG 1 cut(s) 622
BspTNI GGTCTC 1 cut(s) 578
BsrDI GCAATG 2 cut(s) 429, 603
BsrI ACTGG 1 cut(s) 859
BssECI CCNNGG 2 cut(s) 328, 589
BssMI GATC 3 cut(s) 121, 343, 718
BssNI GRCGYC 1 cut(s) 415
BssT1I CCWWGG 2 cut(s) 328, 589
Bst2UI CCWGG 1 cut(s) 531
Bst4CI ACNGT 4 cut(s) 85, 553, 767, 890
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 2 cut(s) 179, 751
BstC8I GCNNGC 1 cut(s) 756
BstDEI CTNAG 9 cut(s) 107, 197, 268, 442, 575, 648, 654, 781, 934
BstDSI CCRYGG 1 cut(s) 328
BstF5I GGATG 2 cut(s) 52, 915
BstHHI GCGC 2 cut(s) 147, 928
BstKTI GATC 3 cut(s) 124, 346, 721
BstMAI GTCTC 2 cut(s) 559, 578
BstMBI GATC 3 cut(s) 121, 343, 718
BstMWI GCNNNNNNNGC 8 cut(s) 179, 248, 365, 443, 614, 623, 626, 751
BstNI CCWGG 1 cut(s) 531
BstNSI RCATGY 1 cut(s) 390
BstPAI GACNNNNGTC 1 cut(s) 570
BstSCI CCNGG 2 cut(s) 529, 843
BstSFI CTRYAG 2 cut(s) 393, 618
BstV1I GCAGC 7 cut(s) 64, 157, 214, 421, 604, 757, 940
BstV2I GAAGAC 1 cut(s) 276
BstX2I RGATCY 2 cut(s) 121, 718
BstYI RGATCY 2 cut(s) 121, 718
BsuRI GGCC 2 cut(s) 266, 843
BtgI CCRYGG 1 cut(s) 328
BtsCI GGATG 2 cut(s) 52, 915
BtsIMutI CAGTG 5 cut(s) 81, 583, 789, 866, 895
Cac8I GCNNGC 1 cut(s) 756
CaiI CAGNNNCTG 1 cut(s) 557
CciI TCATGA 1 cut(s) 313
CfoI GCGC 2 cut(s) 147, 928
Cfr13I GGNCC 1 cut(s) 7
CseI GACGC 1 cut(s) 404
Csp6I GTAC 2 cut(s) 155, 691
CviAII CATG 5 cut(s) 11, 314, 329, 387, 742
CviQI GTAC 2 cut(s) 155, 691
DdeI CTNAG 9 cut(s) 107, 197, 268, 442, 575, 648, 654, 781, 934
DpnI GATC 3 cut(s) 123, 345, 720
DpnII GATC 3 cut(s) 121, 343, 718
EaeI YGGCCR 1 cut(s) 841
Eco130I CCWWGG 2 cut(s) 328, 589
Eco31I GGTCTC 1 cut(s) 578
Eco47I GGWCC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 179
EcoRII CCWGG 1 cut(s) 529
EcoT14I CCWWGG 2 cut(s) 328, 589
ErhI CCWWGG 2 cut(s) 328, 589
FaeI CATG 5 cut(s) 14, 317, 332, 390, 745
FatI CATG 5 cut(s) 10, 313, 328, 386, 741
Fnu4HI GCNGC 8 cut(s) 53, 171, 228, 435, 618, 627, 746, 929
FokI GGATG 2 cut(s) 59, 902
Fsp4HI GCNGC 8 cut(s) 53, 171, 228, 435, 618, 627, 746, 929
FspBI CTAG 3 cut(s) 71, 590, 923
GlaI GCGC 2 cut(s) 146, 927
GluI GCNGC 8 cut(s) 53, 171, 228, 435, 618, 627, 746, 929
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 2 cut(s) 266, 843
HapII CCGG 3 cut(s) 383, 724, 844
HgaI GACGC 1 cut(s) 404
HhaI GCGC 2 cut(s) 147, 928
Hin1I GRCGYC 1 cut(s) 415
Hin1II CATG 5 cut(s) 14, 317, 332, 390, 745
Hin6I GCGC 2 cut(s) 145, 926
HinP1I GCGC 2 cut(s) 145, 926
HinfI GANTC 4 cut(s) 40, 560, 738, 829
HpaII CCGG 3 cut(s) 383, 724, 844
Hpy166II GTNNAC 2 cut(s) 23, 693
Hpy188I TCNGA 5 cut(s) 271, 297, 559, 565, 679
Hpy188III TCNNGA 4 cut(s) 44, 314, 373, 536
Hpy8I GTNNAC 2 cut(s) 23, 693
Hpy99I CGWCG 1 cut(s) 279
HpyAV CCTTC 2 cut(s) 154, 379
HpyCH4III ACNGT 4 cut(s) 85, 553, 767, 890
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 7 cut(s) 52, 173, 182, 620, 745, 754, 775
HpyF10VI GCNNNNNNNGC 8 cut(s) 179, 248, 365, 443, 614, 623, 626, 751
HpyF3I CTNAG 9 cut(s) 107, 197, 268, 442, 575, 648, 654, 781, 934
HpySE526I ACGT 1 cut(s) 274
Hsp92I GRCGYC 1 cut(s) 415
Hsp92II CATG 5 cut(s) 14, 317, 332, 390, 745
HspAI GCGC 2 cut(s) 145, 926
Kzo9I GATC 3 cut(s) 121, 343, 718
LmnI GCTCC 2 cut(s) 97, 256
Lsp1109I GCAGC 7 cut(s) 64, 157, 214, 421, 604, 757, 940
LweI GCATC 5 cut(s) 397, 455, 613, 721, 924
MaeI CTAG 3 cut(s) 71, 590, 923
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 5 cut(s) 79, 136, 598, 797, 826
MalI GATC 3 cut(s) 123, 345, 720
MboI GATC 3 cut(s) 121, 343, 718
MboII GAAGA 4 cut(s) 116, 223, 276, 728
MflI RGATCY 2 cut(s) 121, 718
MluCI AATT 6 cut(s) 177, 468, 494, 594, 834, 952
MlyI GAGTC 1 cut(s) 823
MmeI TCCRAC 1 cut(s) 943
MseI TTAA 2 cut(s) 476, 897
MslI CAYNNNNRTG 2 cut(s) 132, 134
MspA1I CMGCKG 1 cut(s) 977
MspI CCGG 3 cut(s) 383, 724, 844
MspR9I CCNGG 2 cut(s) 531, 845
Mva1269I GAATGC 1 cut(s) 775
MvaI CCWGG 1 cut(s) 531
MwoI GCNNNNNNNGC 8 cut(s) 179, 248, 365, 443, 614, 623, 626, 751
NciI CCSGG 1 cut(s) 845
NcoI CCATGG 1 cut(s) 328
NdeII GATC 3 cut(s) 121, 343, 718
NlaIII CATG 5 cut(s) 14, 317, 332, 390, 745
NlaIV GGNNCC 3 cut(s) 8, 252, 326
NmuCI GTSAC 4 cut(s) 79, 136, 797, 826
NspI RCATGY 1 cut(s) 390
OliI CACNNNNGTG 1 cut(s) 134
PagI TCATGA 1 cut(s) 313
PctI GAATGC 1 cut(s) 775
PfeI GAWTC 3 cut(s) 40, 560, 738
PflMI CCANNNNNTGG 2 cut(s) 839, 865
PkrI GCNGC 8 cut(s) 54, 172, 229, 436, 619, 628, 747, 930
PleI GAGTC 1 cut(s) 823
PpsI GAGTC 1 cut(s) 823
PshAI GACNNNNGTC 1 cut(s) 570
Psp6I CCWGG 1 cut(s) 529
PspGI CCWGG 1 cut(s) 529
PspN4I GGNNCC 3 cut(s) 8, 252, 326
PspPI GGNCC 1 cut(s) 7
PstI CTGCAG 1 cut(s) 622
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 2 cut(s) 121, 718
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 2 cut(s) 156, 692
RsaNI GTAC 2 cut(s) 155, 691
RseI CAYNNNNRTG 2 cut(s) 132, 134
SaqAI TTAA 2 cut(s) 476, 897
SatI GCNGC 8 cut(s) 53, 171, 228, 435, 618, 627, 746, 929
Sau3AI GATC 3 cut(s) 121, 343, 718
Sau96I GGNCC 1 cut(s) 7
SchI GAGTC 1 cut(s) 823
ScrFI CCNGG 2 cut(s) 531, 845
SfaNI GCATC 5 cut(s) 397, 455, 613, 721, 924
SfcI CTRYAG 2 cut(s) 393, 618
SinI GGWCC 1 cut(s) 7
SmiMI CAYNNNNRTG 2 cut(s) 132, 134
Sse9I AATT 6 cut(s) 177, 468, 494, 594, 834, 952
SsiI CCGC 3 cut(s) 240, 626, 913
SspI AATATT 1 cut(s) 190
SspMI CTAG 3 cut(s) 71, 590, 923
StyD4I CCNGG 2 cut(s) 529, 843
StyI CCWWGG 2 cut(s) 328, 589
TaaI ACNGT 4 cut(s) 85, 553, 767, 890
TaiI ACGT 1 cut(s) 277
TasI AATT 6 cut(s) 177, 468, 494, 594, 834, 952
TatI WGTACW 2 cut(s) 154, 690
TauI GCSGC 1 cut(s) 629
TfiI GAWTC 3 cut(s) 40, 560, 738
Tru1I TTAA 2 cut(s) 476, 897
Tru9I TTAA 2 cut(s) 476, 897
TscAI CASTG 5 cut(s) 88, 583, 789, 866, 895
TseFI GTSAC 4 cut(s) 79, 136, 797, 826
TseI GCWGC 7 cut(s) 52, 170, 227, 434, 617, 745, 928
Tsp45I GTSAC 4 cut(s) 79, 136, 797, 826
TspDTI ATGAA 1 cut(s) 27
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 5 cut(s) 88, 583, 789, 866, 895
Van91I CCANNNNNTGG 2 cut(s) 839, 865
VpaK11BI GGWCC 1 cut(s) 7
XceI RCATGY 1 cut(s) 390
XmaJI CCTAGG 1 cut(s) 589
XspI CTAG 3 cut(s) 71, 590, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.