Rw6G009940

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
16933904 .. 16936098
2195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009940.1

Sequence Viewer

Length: 1176 bp
ATGGAATTAGCATTGGACGGGCTGCGAGAGTTTCTTAATGTTGGGGATGTTGGTGGGATCGAGAGATATGCTTTGTCGATTCTTAAAGTGTGCCAAGTTCTTGTTGAGAGGAAAACCAGTCCAGTAACAGTAGGATGTCTGGACTTATTACATGGGTTATTGGGCTTGTGTATCAGGCCGAAGACTGAAAAGTCACTGGGTTCCTTGGGTTCTGATGGTGTACAATTTGTCATTGCACGTATCATAGAGTGTTATACTTCTGTTCGTGATGTGAAATCATTAGAATCCTATTTACTAGAGTTGCAGACACTACATGCCAATCATGCTGGGAAGAGTTATTGCGGTGCACTAACGACAACTGGCAATGAAATTAATGCAATTCATGCCTTGGCACAGTATGATAAGGGTGAATATCAGGCAGCATGGGCATGCCTTGGTTTGACCCCTAAAAGTAGCAGTGAGCTCGCACTTGATCCCAAATTGGCCTTCCAAAGAAGTGAGCATATGCTCTTACAGGCAATGCTTTTTCAGAATGGTGAAAAGGAAGATAAGGTGCCACATGAGTTGGAGAAGGCCAGCTATCTCAAAGATCACATATTGAGCTGCTCTGGGGAAAGACACCATGATTTCCTCATCTCGAAACTGCCCTATGCGGGTATCCTGCTAATGCATGCTGAAAACAACTTAGAGGATGCTTTGACCAACCTATGGTCTTTTGTGAGTCCTATCATAATTCCTTCACCATCTGTAGGATTTGATGCTGACAATAGTATTCTGAAAGCCAAGGCACGCGTGAAACTCTCAAACTGGCTTAAACAGAAGTATTCAGATTCGAGGCTAGATGAGGTTATTGTTAAGATGCGATCAGATTTTGATATGGCCAATTCCTCATTTCTGAGCAGAGGTGGACCCTCATTTGTCAATGAGATTTTAATCTCTAAACCGCCTCTAGGTCCTATTGTTGAGGAGTTTGTGCTCTTCCTGAATAAGGATGATGGGGGTTTCACTACTAAACAGGCAGAGTTGAGCTTTTCTATTGATTCTGCTGCACCAAGAAATGACAATACTGTGATGGCATTGGTTCTGCAAGTAGTGAATATTATTGAAACTGTTTCAGGGGCACCTGGTGTTGAAGACTCAAGTGAAGATTGCTTTTCTGCTACTCTAGCTTTTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

391

Amino Acids

42.82

Weight (kDa)

5.21

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 190
AccB1I GGYRCC 2 cut(s) 553, 1120
AccB7I CCANNNNNTGG 1 cut(s) 708
AccII CGCG 1 cut(s) 792
AciI CCGC 3 cut(s) 342, 653, 944
AclWI GGATC 2 cut(s) 65, 467
AcoI YGGCCR 1 cut(s) 879
AdeI CACNNNGTG 1 cut(s) 1127
AfaI GTAC 1 cut(s) 222
AfiI CCNNNNNNNGG 5 cut(s) 653, 708, 749, 950, 988
AflIII ACRYGT 1 cut(s) 790
AgsI TTSAA 2 cut(s) 1106, 1133
AjnI CCWGG 1 cut(s) 1123
AjuI GAANNNNNNNTTGG 2 cut(s) 470, 502
AluBI AGCT 5 cut(s) 463, 579, 603, 1029, 1169
AluI AGCT 5 cut(s) 463, 579, 603, 1029, 1169
Alw21I GWGCWC 3 cut(s) 349, 465, 978
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 2 cut(s) 65, 467
AoxI GGCC 4 cut(s) 176, 483, 573, 879
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 4 cut(s) 22, 419, 603, 1046
AseI ATTAAT 1 cut(s) 372
AspS9I GGNCC 2 cut(s) 908, 953
AsuHPI GGTGA 3 cut(s) 419, 548, 732
AvaII GGWCC 2 cut(s) 908, 953
BaeGI GKGCMC 2 cut(s) 349, 1123
BalI TGGCCA 1 cut(s) 881
BanI GGYRCC 2 cut(s) 553, 1120
BanII GRGCYC 1 cut(s) 465
BbsI GAAGAC 2 cut(s) 188, 1140
Bbv12I GWGCWC 3 cut(s) 349, 465, 978
BbvI GCAGC 4 cut(s) 9, 431, 590, 1033
BccI CCATC 4 cut(s) 209, 751, 989, 1066
BcgI CGANNNNNNTGC 4 cut(s) 50, 84, 445, 479
BciT130I CCWGG 1 cut(s) 1125
BciVI GTATCC 1 cut(s) 668
BfaI CTAG 4 cut(s) 296, 839, 950, 1166
BfmI CTRYAG 1 cut(s) 747
BfuI GTATCC 1 cut(s) 668
BisI GCNGC 4 cut(s) 23, 420, 604, 1047
BlsI GCNGC 4 cut(s) 24, 421, 605, 1048
Bme1390I CCNGG 1 cut(s) 1125
Bme18I GGWCC 2 cut(s) 908, 953
BmgT120I GGNCC 2 cut(s) 908, 953
BmiI GGNNCC 4 cut(s) 202, 555, 910, 1122
BmrFI CCNGG 1 cut(s) 1125
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 3 cut(s) 682, 748, 849
BmuI ACTGGG 1 cut(s) 206
BpiI GAAGAC 2 cut(s) 188, 1140
BpuEI CTTGAG 1 cut(s) 1123
BsaAI YACGTR 1 cut(s) 239
BsaBI GATNNNNATC 1 cut(s) 932
BsaJI CCNNGG 4 cut(s) 204, 387, 433, 783
Bsc4I CCNNNNNNNGG 5 cut(s) 653, 708, 749, 950, 988
Bse1I ACTGG 5 cut(s) 117, 122, 201, 364, 812
Bse3DI GCAATG 3 cut(s) 231, 370, 525
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 1 cut(s) 1125
BseDI CCNNGG 4 cut(s) 204, 387, 433, 783
BseGI GGATG 4 cut(s) 52, 140, 697, 997
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 5 cut(s) 653, 708, 749, 950, 988
BseMI GCAATG 3 cut(s) 231, 370, 525
BseMII CTCAG 1 cut(s) 887
BseNI ACTGG 5 cut(s) 117, 122, 201, 364, 812
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 2 cut(s) 349, 1123
BseXI GCAGC 4 cut(s) 9, 431, 590, 1033
BseYI CCCAGC 1 cut(s) 326
BsgI GTGCAG 1 cut(s) 1032
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 4 cut(s) 178, 485, 575, 881
BshNI GGYRCC 2 cut(s) 553, 1120
BsiHKAI GWGCWC 3 cut(s) 349, 465, 978
BslI CCNNNNNNNGG 5 cut(s) 653, 708, 749, 950, 988
BsnI GGCC 4 cut(s) 178, 485, 575, 881
Bsp1286I GDGCHC 4 cut(s) 349, 465, 978, 1123
Bsp1407I TGTACA 1 cut(s) 220
Bsp143I GATC 4 cut(s) 57, 472, 589, 863
BspACI CCGC 3 cut(s) 342, 653, 944
BspANI GGCC 4 cut(s) 178, 485, 575, 881
BspCNI CTCAG 1 cut(s) 888
BspFNI CGCG 1 cut(s) 792
BspLI GGNNCC 4 cut(s) 202, 555, 910, 1122
BspPI GGATC 2 cut(s) 65, 467
BspQI GCTCTTC 1 cut(s) 983
BspT107I GGYRCC 2 cut(s) 553, 1120
BsrDI GCAATG 3 cut(s) 231, 370, 525
BsrGI TGTACA 1 cut(s) 220
BsrI ACTGG 5 cut(s) 117, 122, 201, 364, 812
BssECI CCNNGG 4 cut(s) 204, 387, 433, 783
BssMI GATC 4 cut(s) 57, 472, 589, 863
BssT1I CCWWGG 4 cut(s) 204, 387, 433, 783
Bst2UI CCWGG 1 cut(s) 1125
Bst4CI ACNGT 4 cut(s) 130, 396, 1069, 1111
Bst6I CTCTTC 2 cut(s) 326, 983
BstAPI GCANNNNNTGC 1 cut(s) 383
BstAUI TGTACA 1 cut(s) 220
BstBAI YACGTR 1 cut(s) 239
BstC8I GCNNGC 5 cut(s) 430, 465, 577, 672, 790
BstDEI CTNAG 2 cut(s) 685, 896
BstENI CCTNNNNNAGG 1 cut(s) 986
BstF5I GGATG 4 cut(s) 52, 140, 697, 997
BstFNI CGCG 1 cut(s) 792
BstKTI GATC 4 cut(s) 60, 475, 592, 866
BstMBI GATC 4 cut(s) 57, 472, 589, 863
BstMWI GCNNNNNNNGC 4 cut(s) 323, 383, 425, 1166
BstNI CCWGG 1 cut(s) 1125
BstNSI RCATGY 3 cut(s) 317, 432, 674
BstSCI CCNGG 1 cut(s) 1123
BstSFI CTRYAG 1 cut(s) 747
BstSLI GKGCMC 2 cut(s) 349, 1123
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 4 cut(s) 9, 431, 590, 1033
BstV2I GAAGAC 2 cut(s) 188, 1140
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 4 cut(s) 178, 485, 575, 881
BtsCI GGATG 4 cut(s) 52, 140, 697, 997
BtsI GCAGTG 1 cut(s) 463
BtsIMutI CAGTG 2 cut(s) 194, 463
Cac8I GCNNGC 5 cut(s) 430, 465, 577, 672, 790
Cfr13I GGNCC 2 cut(s) 908, 953
CsiI ACCWGGT 1 cut(s) 1123
Csp6I GTAC 1 cut(s) 221
CspCI CAANNNNNGTGG 2 cut(s) 546, 581
CviAII CATG 9 cut(s) 152, 314, 323, 383, 423, 429, 560, 623, 671
CviQI GTAC 1 cut(s) 221
DdeI CTNAG 2 cut(s) 685, 896
DpnI GATC 4 cut(s) 59, 474, 591, 865
DpnII GATC 4 cut(s) 57, 472, 589, 863
DraIII CACNNNGTG 1 cut(s) 1127
DrdI GACNNNNNNGTC 1 cut(s) 190
DseDI GACNNNNNNGTC 1 cut(s) 190
EaeI YGGCCR 1 cut(s) 879
Eam1104I CTCTTC 2 cut(s) 326, 983
EarI CTCTTC 2 cut(s) 326, 983
Ecl136II GAGCTC 1 cut(s) 463
Eco130I CCWWGG 4 cut(s) 204, 387, 433, 783
Eco24I GRGCYC 1 cut(s) 465
Eco47I GGWCC 2 cut(s) 908, 953
Eco53kI GAGCTC 1 cut(s) 463
EcoICRI GAGCTC 1 cut(s) 463
EcoNI CCTNNNNNAGG 1 cut(s) 986
EcoO109I RGGNCCY 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 1123
EcoT14I CCWWGG 4 cut(s) 204, 387, 433, 783
EcoT22I ATGCAT 1 cut(s) 672
EcoT38I GRGCYC 1 cut(s) 465
ErhI CCWWGG 4 cut(s) 204, 387, 433, 783
FaeI CATG 9 cut(s) 155, 317, 326, 386, 426, 432, 563, 626, 674
FatI CATG 9 cut(s) 151, 313, 322, 382, 422, 428, 559, 622, 670
FauI CCCGC 1 cut(s) 646
FauNDI CATATG 1 cut(s) 504
Fnu4HI GCNGC 4 cut(s) 23, 420, 604, 1047
FokI GGATG 4 cut(s) 59, 147, 704, 1004
FriOI GRGCYC 1 cut(s) 465
Fsp4HI GCNGC 4 cut(s) 23, 420, 604, 1047
FspBI CTAG 4 cut(s) 296, 839, 950, 1166
GluI GCNGC 4 cut(s) 23, 420, 604, 1047
GsaI CCCAGC 1 cut(s) 330
HaeIII GGCC 4 cut(s) 178, 485, 575, 881
Hin1II CATG 9 cut(s) 155, 317, 326, 386, 426, 432, 563, 626, 674
HinfI GANTC 6 cut(s) 79, 284, 721, 830, 1040, 1136
HphI GGTGA 3 cut(s) 419, 548, 732
Hpy166II GTNNAC 3 cut(s) 221, 347, 908
Hpy188I TCNGA 6 cut(s) 214, 531, 777, 829, 868, 897
Hpy188III TCNNGA 5 cut(s) 61, 140, 266, 637, 982
Hpy8I GTNNAC 3 cut(s) 221, 347, 908
HpyAV CCTTC 3 cut(s) 496, 565, 747
HpyCH4III ACNGT 4 cut(s) 130, 396, 1069, 1111
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 7 cut(s) 236, 304, 347, 377, 670, 1049, 1087
HpyF10VI GCNNNNNNNGC 4 cut(s) 323, 383, 425, 1166
HpyF3I CTNAG 2 cut(s) 685, 896
HpySE526I ACGT 1 cut(s) 238
Hsp92II CATG 9 cut(s) 155, 317, 326, 386, 426, 432, 563, 626, 674
Kzo9I GATC 4 cut(s) 57, 472, 589, 863
LguI GCTCTTC 1 cut(s) 983
Lsp1109I GCAGC 4 cut(s) 9, 431, 590, 1033
LweI GCATC 3 cut(s) 682, 748, 849
MabI ACCWGGT 1 cut(s) 1123
MaeI CTAG 4 cut(s) 296, 839, 950, 1166
MaeII ACGT 1 cut(s) 238
MaeIII GTNAC 2 cut(s) 124, 192
MalI GATC 4 cut(s) 59, 474, 591, 865
MboI GATC 4 cut(s) 57, 472, 589, 863
MboII GAAGA 6 cut(s) 193, 343, 557, 970, 1145, 1157
MhlI GDGCHC 4 cut(s) 349, 465, 978, 1123
MlsI TGGCCA 1 cut(s) 881
MluCI AATT 7 cut(s) 5, 224, 369, 378, 479, 732, 883
MluI ACGCGT 1 cut(s) 790
MluNI TGGCCA 1 cut(s) 881
MlyI GAGTC 2 cut(s) 730, 1130
MmeI TCCRAC 1 cut(s) 546
Mox20I TGGCCA 1 cut(s) 881
Mph1103I ATGCAT 1 cut(s) 672
MscI TGGCCA 1 cut(s) 881
MseI TTAA 6 cut(s) 36, 84, 372, 813, 855, 932
MslI CAYNNNNRTG 1 cut(s) 427
Msp20I TGGCCA 1 cut(s) 881
MspR9I CCNGG 1 cut(s) 1125
MvaI CCWGG 1 cut(s) 1125
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 4 cut(s) 323, 383, 425, 1166
NdeI CATATG 1 cut(s) 504
NdeII GATC 4 cut(s) 57, 472, 589, 863
NlaIII CATG 9 cut(s) 155, 317, 326, 386, 426, 432, 563, 626, 674
NlaIV GGNNCC 4 cut(s) 202, 555, 910, 1122
NmuCI GTSAC 1 cut(s) 192
NsiI ATGCAT 1 cut(s) 672
NspI RCATGY 3 cut(s) 317, 432, 674
PaeI GCATGC 2 cut(s) 432, 674
PciSI GCTCTTC 1 cut(s) 983
PfeI GAWTC 4 cut(s) 79, 284, 830, 1040
PflMI CCANNNNNTGG 1 cut(s) 708
PkrI GCNGC 4 cut(s) 24, 421, 605, 1048
PleI GAGTC 2 cut(s) 729, 1130
PpsI GAGTC 2 cut(s) 729, 1130
Ppu21I YACGTR 1 cut(s) 239
PpuMI RGGWCCY 1 cut(s) 953
PshBI ATTAAT 1 cut(s) 372
Psp124BI GAGCTC 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 953
Psp6I CCWGG 1 cut(s) 1123
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 1 cut(s) 1123
PspN4I GGNNCC 4 cut(s) 202, 555, 910, 1122
PspPI GGNCC 2 cut(s) 908, 953
PspPPI RGGWCCY 1 cut(s) 953
RsaI GTAC 1 cut(s) 222
RsaNI GTAC 1 cut(s) 221
RseI CAYNNNNRTG 1 cut(s) 427
SacI GAGCTC 1 cut(s) 465
SapI GCTCTTC 1 cut(s) 983
SaqAI TTAA 6 cut(s) 36, 84, 372, 813, 855, 932
SatI GCNGC 4 cut(s) 23, 420, 604, 1047
Sau3AI GATC 4 cut(s) 57, 472, 589, 863
Sau96I GGNCC 2 cut(s) 908, 953
SchI GAGTC 2 cut(s) 730, 1130
ScrFI CCNGG 1 cut(s) 1125
SduI GDGCHC 4 cut(s) 349, 465, 978, 1123
SexAI ACCWGGT 1 cut(s) 1123
SfaNI GCATC 3 cut(s) 682, 748, 849
SfcI CTRYAG 1 cut(s) 747
SinI GGWCC 2 cut(s) 908, 953
SmiMI CAYNNNNRTG 1 cut(s) 427
SmlI CTYRAG 1 cut(s) 1138
SmoI CTYRAG 1 cut(s) 1138
SphI GCATGC 2 cut(s) 432, 674
Sse9I AATT 7 cut(s) 5, 224, 369, 378, 479, 732, 883
SsiI CCGC 3 cut(s) 342, 653, 944
SspI AATATT 1 cut(s) 1099
SspMI CTAG 4 cut(s) 296, 839, 950, 1166
SstI GAGCTC 1 cut(s) 465
StyD4I CCNGG 1 cut(s) 1123
StyI CCWWGG 4 cut(s) 204, 387, 433, 783
TaaI ACNGT 4 cut(s) 130, 396, 1069, 1111
TaiI ACGT 1 cut(s) 241
TaqI TCGA 4 cut(s) 60, 77, 638, 833
TasI AATT 7 cut(s) 5, 224, 369, 378, 479, 732, 883
TatI WGTACW 1 cut(s) 220
TfiI GAWTC 4 cut(s) 79, 284, 830, 1040
Tru1I TTAA 6 cut(s) 36, 84, 372, 813, 855, 932
Tru9I TTAA 6 cut(s) 36, 84, 372, 813, 855, 932
TscAI CASTG 2 cut(s) 201, 463
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 4 cut(s) 22, 419, 603, 1046
Tsp45I GTSAC 1 cut(s) 192
TspDTI ATGAA 2 cut(s) 371, 381
TspRI CASTG 2 cut(s) 201, 463
Van91I CCANNNNNTGG 1 cut(s) 708
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 2 cut(s) 908, 953
VspI ATTAAT 1 cut(s) 372
XagI CCTNNNNNAGG 1 cut(s) 986
XceI RCATGY 3 cut(s) 317, 432, 674
XspI CTAG 4 cut(s) 296, 839, 950, 1166
Zsp2I ATGCAT 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.