Rh6CG098100

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0004425
Physical Location & Seq
Forward (+)
10837006 .. 10838534
1529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG098100.1

Sequence Viewer

Length: 1218 bp
ATGAACTTGTTAAGTTTGGCCCGCAAACGAGGAAACTTACTATTGGCAAATCGTTTAAATAGCTATCGCAAAGATCATATATTGAGCTGCTCTGGGGAAAGACACCAGGATTTCCTCATCTCGAAACTGCCCTATGGGGGTATCCTGCTAATGCATGCTGAAAACAACTTAGAGGATGCTTTGACCAACCTATGGTCTTTTGTGAGTCCTATCATAATTCCTTCACCATCTGTAGAATTTGATGCTGACAATAGTATTCTGAAAGCCAAGGCACGCGTGAAACTCTCAAACTGGCTTAAACAGAAGTATTTAGATTCGAGGCTAGATGGGATTATTGTTAAGATGCGATCAGATTTTGATATGGCCAATTCCTCATTTCCGAGCAGAGGTGGACCCTCATTTGTCGATGAGATTTTAATCTCTAAACCACCTCTGGGTCCTACTGTTGAGGAGTTTGTGCTCTTCCTGAATAAGGATGATGGGGGTTTCACTGCTGAACTGGGAGAGTTGAGCTTTTCTATTGATTCTGCTGCACCAAGAAATGACAATACTGTGATGGCATTGGTTCTGCAAGCAGTGAGTATTATTGAAACTGTTTCTGGGGCACCTGGTGTTGAAGACTCAAGTGAAGATTGCTTTTCTGCTGCTCTAGCTTCTCAGTTGAAGATCTGCTTCCTTCATCCCAATATTGGTTTAACTGAAACCGACATAATTTCTGTTGTCTATGATTTAGTAGCTGTGTGGTGGTCTTTGAGGAGGAGGAGAGTGTCTCTCGTTGGCCACGCAGCTCAAGATTTTATACAGTATCTTTCATATTCATCTGCCAAAATTTGCAATAGTGGTTTGGTTGACTCTGGTCCTGAACCTATGAAACAAAAAACTGGCAGCTGTACGCTTAGGGCCACATTGTATGTCCTGCATATTCTTCTCAGTTATGGAGCTGAGTTGAAAGATATACTTGAACCTGCGCTTTCAACAGTTCCTTTGTCACCGTGGCAGGTGGTCACCCCCCAATTGTTTGCTTGGTTAAGTTCTCATCCTGAGCAAGTGGTAAGGAAGCAGTTGGAGGGCTTATTGATGATGCTGGCCAAACAATCTCCTTGGTCCATAGTCTACCCGACATTAGCTGATGTGAATGCTTACGATCGAAGAGAAGCCTTCGGAGGAGCTCCAACACATACTTGGTTGTTTGGTAACAAACTTTCTTTCAAGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

405

Amino Acids

44.8

Weight (kDa)

6.09

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 988
Acc36I ACCTGC 2 cut(s) 973, 988
AccB1I GGYRCC 1 cut(s) 604
AccB7I CCANNNNNTGG 1 cut(s) 192
AccI GTMKAC 1 cut(s) 1113
AccII CGCG 1 cut(s) 276
AciI CCGC 1 cut(s) 22
AcoI YGGCCR 3 cut(s) 363, 778, 1086
AcsI RAATTY 2 cut(s) 236, 828
AdeI CACNNNGTG 1 cut(s) 611
AfaI GTAC 1 cut(s) 892
AfiI CCNNNNNNNGG 6 cut(s) 137, 192, 386, 434, 472, 689
AflIII ACRYGT 1 cut(s) 274
AgsI TTSAA 7 cut(s) 590, 617, 664, 949, 962, 975, 1210
AjnI CCWGG 2 cut(s) 105, 607
Alw21I GWGCWC 2 cut(s) 462, 1171
Alw26I GTCTC 1 cut(s) 774
AoxI GGCC 5 cut(s) 18, 363, 778, 900, 1086
ApeKI GCWGC 5 cut(s) 87, 530, 644, 785, 885
ApoI RAATTY 2 cut(s) 236, 828
AspLEI GCGC 1 cut(s) 970
AspS9I GGNCC 6 cut(s) 19, 392, 437, 857, 900, 1104
AsuHPI GGTGA 3 cut(s) 216, 981, 997
AvaII GGWCC 4 cut(s) 392, 437, 857, 1104
BaeGI GKGCMC 1 cut(s) 607
BalI TGGCCA 3 cut(s) 365, 780, 1088
BanI GGYRCC 1 cut(s) 604
BanII GRGCYC 1 cut(s) 1171
BbsI GAAGAC 1 cut(s) 624
Bbv12I GWGCWC 2 cut(s) 462, 1171
BbvI GCAGC 5 cut(s) 74, 517, 631, 797, 897
BccI CCATC 4 cut(s) 235, 320, 473, 550
BciT130I CCWGG 2 cut(s) 107, 609
BciVI GTATCC 1 cut(s) 152
BcoDI GTCTC 1 cut(s) 774
BfaI CTAG 2 cut(s) 323, 650
BfmI CTRYAG 1 cut(s) 231
BfuAI ACCTGC 2 cut(s) 973, 988
BfuI GTATCC 1 cut(s) 152
BglII AGATCT 1 cut(s) 666
BisI GCNGC 5 cut(s) 88, 531, 645, 786, 886
BlsI GCNGC 5 cut(s) 89, 532, 646, 787, 887
Bme1390I CCNGG 2 cut(s) 107, 609
Bme18I GGWCC 4 cut(s) 392, 437, 857, 1104
BmgT120I GGNCC 6 cut(s) 19, 392, 437, 857, 900, 1104
BmiI GGNNCC 3 cut(s) 394, 438, 606
BmrFI CCNGG 2 cut(s) 107, 609
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 4 cut(s) 166, 232, 333, 1071
BmuI ACTGGG 1 cut(s) 509
BoxI GACNNNNGTC 1 cut(s) 855
BpiI GAAGAC 1 cut(s) 624
BplI GAGNNNNNCTC 4 cut(s) 754, 786, 756, 788
Bpu10I CCTNAGC 2 cut(s) 896, 1041
BpuEI CTTGAG 2 cut(s) 607, 774
BsaBI GATNNNNATC 1 cut(s) 416
BsaJI CCNNGG 3 cut(s) 267, 992, 1100
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 192, 386, 434, 472, 689
Bse1I ACTGG 3 cut(s) 296, 504, 886
Bse8I GATNNNNATC 1 cut(s) 416
BseBI CCWGG 2 cut(s) 107, 609
BseDI CCNNGG 3 cut(s) 267, 992, 1100
BseGI GGATG 4 cut(s) 181, 481, 679, 1036
BseJI GATNNNNATC 1 cut(s) 416
BseLI CCNNNNNNNGG 6 cut(s) 137, 192, 386, 434, 472, 689
BseMII CTCAG 4 cut(s) 671, 933, 943, 1032
BseNI ACTGG 3 cut(s) 296, 504, 886
BseRI GAGGAG 5 cut(s) 464, 769, 772, 775, 1179
BseSI GKGCMC 1 cut(s) 607
BseXI GCAGC 5 cut(s) 74, 517, 631, 797, 897
BsgI GTGCAG 1 cut(s) 516
Bsh1236I CGCG 1 cut(s) 276
Bsh1285I CGRYCG 1 cut(s) 1147
BshFI GGCC 5 cut(s) 20, 365, 780, 902, 1088
BshNI GGYRCC 1 cut(s) 604
BsiEI CGRYCG 1 cut(s) 1147
BsiHKAI GWGCWC 2 cut(s) 462, 1171
BslI CCNNNNNNNGG 6 cut(s) 137, 192, 386, 434, 472, 689
BsmAI GTCTC 1 cut(s) 774
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 5 cut(s) 20, 365, 780, 902, 1088
Bsp1286I GDGCHC 3 cut(s) 462, 607, 1171
Bsp143I GATC 4 cut(s) 73, 347, 666, 1144
BspACI CCGC 1 cut(s) 22
BspANI GGCC 5 cut(s) 20, 365, 780, 902, 1088
BspCNI CTCAG 4 cut(s) 670, 934, 942, 1033
BspFNI CGCG 1 cut(s) 276
BspLI GGNNCC 3 cut(s) 394, 438, 606
BspMI ACCTGC 2 cut(s) 973, 988
BspQI GCTCTTC 1 cut(s) 467
BspT107I GGYRCC 1 cut(s) 604
BsrI ACTGG 3 cut(s) 296, 504, 886
BssECI CCNNGG 3 cut(s) 267, 992, 1100
BssMI GATC 4 cut(s) 73, 347, 666, 1144
BssT1I CCWWGG 2 cut(s) 267, 1100
Bst2UI CCWGG 2 cut(s) 107, 609
Bst4CI ACNGT 6 cut(s) 445, 553, 595, 804, 979, 993
Bst6I CTCTTC 2 cut(s) 467, 1144
BstC8I GCNNGC 5 cut(s) 22, 156, 274, 573, 1086
BstDEI CTNAG 6 cut(s) 169, 657, 896, 929, 942, 1041
BstDSI CCRYGG 1 cut(s) 992
BstEII GGTNACC 1 cut(s) 1003
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 4 cut(s) 181, 481, 679, 1036
BstFNI CGCG 1 cut(s) 276
BstHHI GCGC 1 cut(s) 970
BstKTI GATC 4 cut(s) 76, 350, 669, 1147
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 4 cut(s) 73, 347, 666, 1144
BstMCI CGRYCG 1 cut(s) 1147
BstMWI GCNNNNNNNGC 1 cut(s) 650
BstNI CCWGG 2 cut(s) 107, 609
BstNSI RCATGY 1 cut(s) 158
BstPAI GACNNNNGTC 1 cut(s) 855
BstPI GGTNACC 1 cut(s) 1003
BstSCI CCNGG 2 cut(s) 105, 607
BstSFI CTRYAG 1 cut(s) 231
BstSLI GKGCMC 1 cut(s) 607
BstUI CGCG 1 cut(s) 276
BstV1I GCAGC 5 cut(s) 74, 517, 631, 797, 897
BstV2I GAAGAC 1 cut(s) 624
BstX2I RGATCY 1 cut(s) 666
BstYI RGATCY 1 cut(s) 666
BsuI GTATCC 1 cut(s) 152
BsuRI GGCC 5 cut(s) 20, 365, 780, 902, 1088
BtgI CCRYGG 1 cut(s) 992
BtsCI GGATG 4 cut(s) 181, 481, 679, 1036
BtsI GCAGTG 2 cut(s) 489, 582
BtsIMutI CAGTG 2 cut(s) 489, 582
BveI ACCTGC 2 cut(s) 973, 988
Cac8I GCNNGC 5 cut(s) 22, 156, 274, 573, 1086
CfoI GCGC 1 cut(s) 970
Cfr13I GGNCC 6 cut(s) 19, 392, 437, 857, 900, 1104
CsiI ACCWGGT 1 cut(s) 607
Csp6I GTAC 1 cut(s) 891
CviAII CATG 1 cut(s) 155
CviQI GTAC 1 cut(s) 891
DdeI CTNAG 6 cut(s) 169, 657, 896, 929, 942, 1041
DpnI GATC 4 cut(s) 75, 349, 668, 1146
DpnII GATC 4 cut(s) 73, 347, 666, 1144
DraI TTTAAA 1 cut(s) 57
DraIII CACNNNGTG 1 cut(s) 611
EaeI YGGCCR 3 cut(s) 363, 778, 1086
Eam1104I CTCTTC 2 cut(s) 467, 1144
EarI CTCTTC 2 cut(s) 467, 1144
Ecl136II GAGCTC 1 cut(s) 1169
Eco130I CCWWGG 2 cut(s) 267, 1100
Eco24I GRGCYC 1 cut(s) 1171
Eco47I GGWCC 4 cut(s) 392, 437, 857, 1104
Eco53kI GAGCTC 1 cut(s) 1169
Eco91I GGTNACC 1 cut(s) 1003
EcoICRI GAGCTC 1 cut(s) 1169
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 437
EcoO65I GGTNACC 1 cut(s) 1003
EcoRII CCWGG 2 cut(s) 105, 607
EcoT14I CCWWGG 2 cut(s) 267, 1100
EcoT22I ATGCAT 1 cut(s) 156
EcoT38I GRGCYC 1 cut(s) 1171
ErhI CCWWGG 2 cut(s) 267, 1100
FaeI CATG 1 cut(s) 158
FalI AAGNNNNNCTT 4 cut(s) 656, 688, 942, 974
FatI CATG 1 cut(s) 154
FauI CCCGC 1 cut(s) 29
FblI GTMKAC 1 cut(s) 1113
Fnu4HI GCNGC 5 cut(s) 88, 531, 645, 786, 886
FokI GGATG 4 cut(s) 188, 488, 666, 1023
FriOI GRGCYC 1 cut(s) 1171
Fsp4HI GCNGC 5 cut(s) 88, 531, 645, 786, 886
FspBI CTAG 2 cut(s) 323, 650
GlaI GCGC 1 cut(s) 969
GluI GCNGC 5 cut(s) 88, 531, 645, 786, 886
HaeIII GGCC 5 cut(s) 20, 365, 780, 902, 1088
HhaI GCGC 1 cut(s) 970
Hin1II CATG 1 cut(s) 158
Hin6I GCGC 1 cut(s) 968
HinP1I GCGC 1 cut(s) 968
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HinfI GANTC 5 cut(s) 205, 314, 524, 620, 851
HphI GGTGA 3 cut(s) 216, 981, 997
Hpy166II GTNNAC 3 cut(s) 392, 850, 1114
Hpy188I TCNGA 4 cut(s) 261, 352, 381, 1163
Hpy188III TCNNGA 6 cut(s) 121, 466, 791, 860, 1040, 1210
Hpy8I GTNNAC 3 cut(s) 392, 850, 1114
HpyAV CCTTC 3 cut(s) 231, 686, 1168
HpyCH4III ACNGT 6 cut(s) 445, 553, 595, 804, 979, 993
HpyCH4V TGCA 5 cut(s) 154, 533, 571, 834, 919
HpyF10VI GCNNNNNNNGC 1 cut(s) 650
HpyF3I CTNAG 6 cut(s) 169, 657, 896, 929, 942, 1041
Hsp92II CATG 1 cut(s) 158
HspAI GCGC 1 cut(s) 968
Kzo9I GATC 4 cut(s) 73, 347, 666, 1144
LguI GCTCTTC 1 cut(s) 467
LmnI GCTCC 3 cut(s) 938, 1166, 1174
Lsp1109I GCAGC 5 cut(s) 74, 517, 631, 797, 897
LweI GCATC 4 cut(s) 166, 232, 333, 1071
MabI ACCWGGT 1 cut(s) 607
MaeI CTAG 2 cut(s) 323, 650
MaeIII GTNAC 3 cut(s) 987, 1003, 1193
MalI GATC 4 cut(s) 75, 349, 668, 1146
MboI GATC 4 cut(s) 73, 347, 666, 1144
MboII GAAGA 6 cut(s) 454, 629, 641, 676, 917, 1161
MfeI CAATTG 1 cut(s) 1013
MflI RGATCY 1 cut(s) 666
MhlI GDGCHC 3 cut(s) 462, 607, 1171
MlsI TGGCCA 3 cut(s) 365, 780, 1088
MluCI AATT 6 cut(s) 216, 236, 367, 711, 828, 1013
MluI ACGCGT 1 cut(s) 274
MluNI TGGCCA 3 cut(s) 365, 780, 1088
MlyI GAGTC 3 cut(s) 214, 614, 845
MmeI TCCRAC 2 cut(s) 1044, 1196
Mox20I TGGCCA 3 cut(s) 365, 780, 1088
Mph1103I ATGCAT 1 cut(s) 156
MscI TGGCCA 3 cut(s) 365, 780, 1088
MseI TTAA 7 cut(s) 11, 56, 297, 339, 416, 695, 1028
Msp20I TGGCCA 3 cut(s) 365, 780, 1088
MspA1I CMGCKG 1 cut(s) 888
MspR9I CCNGG 2 cut(s) 107, 609
MunI CAATTG 1 cut(s) 1013
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 2 cut(s) 107, 609
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 650
NdeII GATC 4 cut(s) 73, 347, 666, 1144
NlaIII CATG 1 cut(s) 158
NlaIV GGNNCC 3 cut(s) 394, 438, 606
NmuCI GTSAC 2 cut(s) 987, 1003
NsiI ATGCAT 1 cut(s) 156
NspI RCATGY 1 cut(s) 158
PaeI GCATGC 1 cut(s) 158
PaqCI CACCTGC 1 cut(s) 988
PciSI GCTCTTC 1 cut(s) 467
PctI GAATGC 1 cut(s) 1141
PfeI GAWTC 2 cut(s) 314, 524
PflMI CCANNNNNTGG 1 cut(s) 192
PkrI GCNGC 5 cut(s) 89, 532, 646, 787, 887
Ple19I CGATCG 1 cut(s) 1147
PleI GAGTC 3 cut(s) 213, 614, 845
PpsI GAGTC 3 cut(s) 213, 614, 845
PpuMI RGGWCCY 1 cut(s) 437
PshAI GACNNNNGTC 1 cut(s) 855
Psp124BI GAGCTC 1 cut(s) 1171
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 2 cut(s) 105, 607
PspEI GGTNACC 1 cut(s) 1003
PspGI CCWGG 2 cut(s) 105, 607
PspN4I GGNNCC 3 cut(s) 394, 438, 606
PspPI GGNCC 6 cut(s) 19, 392, 437, 857, 900, 1104
PspPPI RGGWCCY 1 cut(s) 437
PsuI RGATCY 1 cut(s) 666
PvuI CGATCG 1 cut(s) 1147
PvuII CAGCTG 1 cut(s) 888
RsaI GTAC 1 cut(s) 892
RsaNI GTAC 1 cut(s) 891
SacI GAGCTC 1 cut(s) 1171
SapI GCTCTTC 1 cut(s) 467
SaqAI TTAA 7 cut(s) 11, 56, 297, 339, 416, 695, 1028
SatI GCNGC 5 cut(s) 88, 531, 645, 786, 886
Sau3AI GATC 4 cut(s) 73, 347, 666, 1144
Sau96I GGNCC 6 cut(s) 19, 392, 437, 857, 900, 1104
SchI GAGTC 3 cut(s) 214, 614, 845
ScrFI CCNGG 2 cut(s) 107, 609
SduI GDGCHC 3 cut(s) 462, 607, 1171
SexAI ACCWGGT 1 cut(s) 607
SfaNI GCATC 4 cut(s) 166, 232, 333, 1071
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 4 cut(s) 392, 437, 857, 1104
SmlI CTYRAG 2 cut(s) 622, 789
SmoI CTYRAG 2 cut(s) 622, 789
SphI GCATGC 1 cut(s) 158
Sse9I AATT 6 cut(s) 216, 236, 367, 711, 828, 1013
SsiI CCGC 1 cut(s) 22
SspI AATATT 1 cut(s) 688
SspMI CTAG 2 cut(s) 323, 650
SstI GAGCTC 1 cut(s) 1171
StyD4I CCNGG 2 cut(s) 105, 607
StyI CCWWGG 2 cut(s) 267, 1100
TaaI ACNGT 6 cut(s) 445, 553, 595, 804, 979, 993
TaqI TCGA 4 cut(s) 122, 317, 405, 1147
TasI AATT 6 cut(s) 216, 236, 367, 711, 828, 1013
TfiI GAWTC 2 cut(s) 314, 524
Tru1I TTAA 7 cut(s) 11, 56, 297, 339, 416, 695, 1028
Tru9I TTAA 7 cut(s) 11, 56, 297, 339, 416, 695, 1028
TscAI CASTG 2 cut(s) 496, 582
TseFI GTSAC 2 cut(s) 987, 1003
TseI GCWGC 5 cut(s) 87, 530, 644, 785, 885
Tsp45I GTSAC 2 cut(s) 987, 1003
TspDTI ATGAA 5 cut(s) 17, 668, 801, 807, 884
TspRI CASTG 2 cut(s) 496, 582
Van91I CCANNNNNTGG 1 cut(s) 192
VpaK11BI GGWCC 4 cut(s) 392, 437, 857, 1104
XagI CCTNNNNNAGG 1 cut(s) 470
XapI RAATTY 2 cut(s) 236, 828
XceI RCATGY 1 cut(s) 158
XcmI CCANNNNNNNNNTGG 1 cut(s) 1179
XmiI GTMKAC 1 cut(s) 1113
XspI CTAG 2 cut(s) 323, 650
Zsp2I ATGCAT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.