FvH4_2g09950

Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0003618
Physical Location & Seq
Reverse (-)
8817544 .. 8827064
9521 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g09950.t1

Sequence Viewer

Length: 2439 bp
ATGGGAGGATGCTGTCCCCCAATGGATCTGTTCAGGTCGGAGCCTATGCAGCTCGTCCAGATCATCATCCCCATCGAGTCCGCCCACCTCACCGTCTCTTATCTCGGCGACCTCGGCCTCCTCCAATTCAAAGACCTGAATACAGAGAAGAGCCCGTTTCAGAGGACTTATGCTACTCAGATTAAAAGATCTGGTGAGATGGCACGTAAATTACGTTTCTTCAAGGATCAAATGTTAAAGTCTGGTCTTCCTCCTCCGAAGGCTACAAGACAAGCGGACCTCAATTTAGATGATCTGGAGGTAAAACTTGGTGAGCTCGAGGCTGAGCTGATTGAAATTAATGCAAATAGTGAAAAGTTGCAGCGTTCATATAATGAACTTGTAGAATATAAGCTCGTCCTGCAAAAGGCTGGTGAGTTTTTTCATTCAGCTGAAAGCAGTGCGAGGTTGCAGCAGAGAGAGGAATCCCGTCATATTGGTGATGACGCCCTGGATACGCCGTTATTGGACCAAGAATCATCTACTGATCCATCAAAGCAAGTCAAGTTGGGGTTTCTCACTGGTCTTGTTCCAAGGGGAAAGTGTTTGGCATTTGAGAGGATTCTATTTCGAGCTACTAGGGGAAATGTTTTTCTAAGGCAGGCTGTTGTTGAGAATCCTGTTACAGATCCTGTGACAGGAGAAAAGATTGAGAAAAATGTTTTTGTGGTATTCTACTCTGGAGAAAGAGCAAAGAACAAGATTCTTAAAATTTGTGATGCTTTTGGAGCCAATCGTTACCCTTTTACTGAGGACCTAAGTAAACAAGCTCAAACCATTAATGAGGTTATGGGTAAACTTTCTGAGCTAAAGACTACTATAGATATTGGAGTTTTACACCGGGGAAGTTTGTTGCAGACTATTGGCGAACATTATGAGCAATGGAATCATTTGGTGAAGAAGGAGAAAGCCATACACCACACTCTTAATATGCTTAGCCTTGATGTAACAAAAAAATGTCTTGTGGGTGAGGGTTGGAGTCCTATTTTTGCATCGAAGCAGATCCAGGAGGCATTGCAGCGGGCAGCCTTTGACTCCAACTCTCAAGTTGGAGCTATCTTCCAGGTTCTGCATACAACAGAAGCACCGCCAACATATTTCCGCACAAACAAGTTCACTTCTTCATTTCAAGAAATTGTTGATGCATATGGTGTGGCCAAGTATCAAGAAGCAAATCCTGCTGTATATACTATCATCACATTTCCATTTCTTTTTGCTGTCATGTTTGGTGATTGGGGACATGGACTATGTTTGCTTCTTGCAACATTATATTTGATAGTCAGGGAAAGGAAGTTTTCTAATGAGAAACTTGGAGATATCATGGAGATGGCTTTTGGTGGCCGTTATGTTATTCTACTGATGTCAATTTTCTCAATCTACACTGGTTTCATCTATAATGAGTTCTTCTCTGTCCCATTTGAACTATTTGGTCGCTCAGCATATGCATGCCGTGATCTTTCTTGCCGAGATGCTACTACTGCTGGCTTAATTAAGGTGGGGCCCACATACCCATTTGGCCTGGATCCTGTATGGCATGGATCTCGTAGTGAGCTGCCATTCTTAAACTCGTTGAAGATGAAAATGTCAATTCTTCTTGGGGTGGTCCAAATGAACCTTGGAATTGTGATAAGTTATTTCAATGCAAAGTTCTTTCAAAATGGTCTGAACGTTTGGTTCCAGTTTATCCCTCAGCTGATATTCTTAAACAGTCTATTTGGATACCTGTCTGTTCTGATTGTTATGAAGTGGTGGACTGGTTCAAAAGTTGATCTATACCATGTAATGATATATATGTTCCTAAGTCCTACTGATGAGCTAGGTGAAAATCAGCTTTTCAGTGGTCAGAAGACAGTTCAGTTAGTGCTATTAGGGTTGGCTCTTGTAGCTGTACCATGGATGCTGATTCCAAAGCCTTTCCTCATGAAAAAGCAACATGAAGCTCGGCACCAAGGCCAATCATATGCTTTACTTGAGAACACAGAGGAGAGTTTGCAAGTGAATTCAAACCATGATGGCCATGGTCATGAGGAGTTTGAATTTAGTGAAGTTTTCGTACATCAACTCATACACACAATAGAGTTTGTACTTGGAGCGGTCTCAAATACAGCTTCTTATCTTCGACTATGGGCCCTAAGTCTTGCTCATTCAGAATTATCCAGTGTGTTCTACGACAAGGTTCTCCTGATGGCTTTTGGGTTCAACAACTGGCTTATACGCATTGTGGGCATCCTTGTCTTTGTTTTCGCGACTGTTGGTGTTTTGCTACTGATGGAAACTCTCAGTGCTTTCCTTCATGCTTTGCGTCTTCACTGGGTGGAATTCCAAAACAAGTTCTATGAGGGAGATGGTTACAAGTTCTATCCATTCTCATTTGTGTTGCATGACGATGAAGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000325 GO:0000331 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006882 GO:0006885 GO:0006897 GO:0006909 GO:0006911 GO:0007035 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009536 GO:0009678 GO:0009705 GO:0009941 GO:0009987 GO:0010008 GO:0010324 GO:0012505 GO:0012506 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019725 GO:0019829 GO:0019899 GO:0022607 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030139 GO:0030641 GO:0030659 GO:0030666 GO:0030670 GO:0031090 GO:0031164 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0032009 GO:0032119 GO:0032991 GO:0033176 GO:0034220 GO:0034622 GO:0034641 GO:0034654 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043181 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044434 GO:0044435 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045335 GO:0045735 GO:0045851 GO:0046034 GO:0046390 GO:0046483 GO:0046916 GO:0046961 GO:0048878 GO:0050801 GO:0051117 GO:0051179 GO:0051234 GO:0051235 GO:0051238 GO:0051452 GO:0051453 GO:0051641 GO:0051651 GO:0055065 GO:0055067 GO:0055069 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0055086 GO:0061024 GO:0065003 GO:0065007 GO:0065008 GO:0070070 GO:0070071 GO:0070072 GO:0071704 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072521 GO:0072522 GO:0090407 GO:0090662 GO:0097708 GO:0098588 GO:0098655 GO:0098657 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0098852 GO:0099024 GO:0099131 GO:0099132 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04142 ko04145 ko04721 ko04966 ko05110 ko05120 ko05152 ko05165 ko05323 map00190 map01100 map04142 map04145 map04721 map04966 map05110 map05120 map05152 map05165 map05323
Pfam Domains
Protein Families
V_ATPase_I

Protein Analysis

813

Amino Acids

92.33

Weight (kDa)

6.06

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
V_ATPase_I PF01496 34 - 804 5.4e-300 V-type ATPase 116kDa subunit family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1983
AccBSI CCGCTC 1 cut(s) 2132
AccII CGCG 1 cut(s) 2285
AciI CCGC 6 cut(s) 81, 275, 1060, 1127, 1141, 2132
AclI AACGTT 1 cut(s) 1707
AclWI GGATC 8 cut(s) 33, 234, 521, 662, 1036, 1556, 1569, 1585
AcoI YGGCCR 3 cut(s) 1194, 1378, 2053
AcsI RAATTY 4 cut(s) 750, 2038, 2075, 2357
AcyI GRCGYC 1 cut(s) 486
AdeI CACNNNGTG 1 cut(s) 2353
AfaI GTAC 3 cut(s) 1929, 2094, 2124
AfiI CCNNNNNNNGG 2 cut(s) 406, 677
AjnI CCWGG 4 cut(s) 489, 1044, 1101, 1557
Alw21I GWGCWC 1 cut(s) 318
Alw26I GTCTC 2 cut(s) 100, 2140
AlwI GGATC 8 cut(s) 33, 234, 521, 662, 1036, 1556, 1569, 1585
AlwNI CAGNNNCTG 2 cut(s) 671, 1108
Ama87I CYCGRG 1 cut(s) 317
AoxI GGCC 8 cut(s) 115, 1194, 1378, 1538, 1555, 1990, 2053, 2166
ApaI GGGCCC 2 cut(s) 1542, 2170
ApeKI GCWGC 6 cut(s) 49, 361, 451, 1057, 1064, 1591
ApoI RAATTY 4 cut(s) 750, 2038, 2075, 2357
AseI ATTAAT 2 cut(s) 339, 819
AspS9I GGNCC 8 cut(s) 277, 508, 793, 1538, 1539, 1642, 2166, 2167
AsuC2I CCSGG 1 cut(s) 881
AsuHPI GGTGA 9 cut(s) 82, 206, 323, 425, 491, 946, 1019, 1280, 1871
AvaI CYCGRG 1 cut(s) 317
AvaII GGWCC 4 cut(s) 277, 508, 793, 1642
BaeGI GKGCMC 2 cut(s) 1542, 2170
BalI TGGCCA 2 cut(s) 1196, 2055
BamHI GGATCC 1 cut(s) 1561
BanI GGYRCC 1 cut(s) 1983
BanII GRGCYC 4 cut(s) 155, 318, 1542, 2170
BarI GAAGNNNNNNTAC 2 cut(s) 2076, 2108
BbsI GAAGAC 3 cut(s) 239, 1892, 2336
Bbv12I GWGCWC 1 cut(s) 318
BbvCI CCTCAGC 1 cut(s) 1728
BbvI GCAGC 6 cut(s) 61, 373, 463, 1069, 1076, 1578
BccI CCATC 8 cut(s) 80, 193, 538, 1360, 2045, 2218, 2302, 2378
BceAI ACGGC 3 cut(s) 484, 1365, 1473
BcgI CGANNNNNNTGC 2 cut(s) 1562, 1596
BciT130I CCWGG 4 cut(s) 491, 1046, 1103, 1559
BciVI GTATCC 2 cut(s) 487, 1751
BcnI CCSGG 1 cut(s) 881
BcoDI GTCTC 2 cut(s) 100, 2140
BfaI CTAG 2 cut(s) 618, 1856
BfmI CTRYAG 1 cut(s) 858
BfuI GTATCC 2 cut(s) 487, 1751
BglII AGATCT 1 cut(s) 188
BisI GCNGC 6 cut(s) 50, 362, 452, 1058, 1065, 1592
BlpI GCTNAGC 3 cut(s) 324, 974, 1474
BlsI GCNGC 6 cut(s) 51, 363, 453, 1059, 1066, 1593
Bme1390I CCNGG 5 cut(s) 491, 881, 1046, 1103, 1559
Bme18I GGWCC 4 cut(s) 277, 508, 793, 1642
BmeT110I CYCGRG 1 cut(s) 317
BmgT120I GGNCC 8 cut(s) 277, 508, 793, 1538, 1539, 1642, 2166, 2167
BmiI GGNNCC 8 cut(s) 42, 769, 1539, 1540, 1563, 1715, 1985, 2168
BmrFI CCNGG 5 cut(s) 491, 881, 1046, 1103, 1559
BmrI ACTGGG 1 cut(s) 2359
BmsI GCATC 6 cut(s) 748, 1040, 1171, 1498, 1926, 2274
BmuI ACTGGG 1 cut(s) 2359
BpiI GAAGAC 3 cut(s) 239, 1892, 2336
BplI GAGNNNNNCTC 2 cut(s) 1430, 1462
BpmI CTGGAG 2 cut(s) 317, 741
Bpu10I CCTNAGC 1 cut(s) 1728
Bpu1102I GCTNAGC 3 cut(s) 324, 974, 1474
BpuEI CTTGAG 2 cut(s) 1068, 2030
BpuMI CCSGG 1 cut(s) 881
BsaAI YACGTR 1 cut(s) 206
BsaBI GATNNNNATC 1 cut(s) 65
BsaHI GRCGYC 1 cut(s) 486
BsaI GGTCTC 1 cut(s) 2140
BsaJI CCNNGG 8 cut(s) 112, 489, 572, 880, 1654, 1931, 1987, 2056
Bsc4I CCNNNNNNNGG 2 cut(s) 406, 677
Bse1I ACTGG 7 cut(s) 565, 1426, 1717, 1798, 2196, 2249, 2354
Bse3DI GCAATG 2 cut(s) 926, 1052
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 4 cut(s) 491, 1046, 1103, 1559
BseDI CCNNGG 8 cut(s) 112, 489, 572, 880, 1654, 1931, 1987, 2056
BseGI GGATG 4 cut(s) 14, 66, 1941, 2265
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 2 cut(s) 406, 677
BseMI GCAATG 2 cut(s) 926, 1052
BseMII CTCAG 7 cut(s) 191, 315, 780, 834, 1488, 1742, 2332
BseNI ACTGG 7 cut(s) 565, 1426, 1717, 1798, 2196, 2249, 2354
BseRI GAGGAG 4 cut(s) 110, 243, 2036, 2081
BseSI GKGCMC 2 cut(s) 1542, 2170
BseXI GCAGC 6 cut(s) 61, 373, 463, 1069, 1076, 1578
Bsh1236I CGCG 1 cut(s) 2285
BshFI GGCC 8 cut(s) 117, 1196, 1380, 1540, 1557, 1992, 2055, 2168
BshNI GGYRCC 1 cut(s) 1983
BsiHKAI GWGCWC 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 317
BsiSI CCGG 1 cut(s) 880
BslFI GGGAC 2 cut(s) 1290, 1436
BslI CCNNNNNNNGG 2 cut(s) 406, 677
BsmAI GTCTC 2 cut(s) 100, 2140
BsmBI CGTCTC 1 cut(s) 100
BsmFI GGGAC 2 cut(s) 1290, 1436
BsnI GGCC 8 cut(s) 117, 1196, 1380, 1540, 1557, 1992, 2055, 2168
Bso31I GGTCTC 1 cut(s) 2140
BsoBI CYCGRG 1 cut(s) 317
Bsp120I GGGCCC 2 cut(s) 1538, 2166
Bsp1286I GDGCHC 4 cut(s) 155, 318, 1542, 2170
Bsp1720I GCTNAGC 3 cut(s) 324, 974, 1474
Bsp19I CCATGG 2 cut(s) 1931, 2056
Bsp68I TCGCGA 1 cut(s) 2285
BspACI CCGC 6 cut(s) 81, 275, 1060, 1127, 1141, 2132
BspANI GGCC 8 cut(s) 117, 1196, 1380, 1540, 1557, 1992, 2055, 2168
BspCNI CTCAG 7 cut(s) 190, 316, 781, 835, 1487, 1741, 2331
BspFNI CGCG 1 cut(s) 2285
BspHI TCATGA 2 cut(s) 1959, 2062
BspLI GGNNCC 8 cut(s) 42, 769, 1539, 1540, 1563, 1715, 1985, 2168
BspPI GGATC 8 cut(s) 33, 234, 521, 662, 1036, 1556, 1569, 1585
BspQI GCTCTTC 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 1983
BspTNI GGTCTC 1 cut(s) 2140
BsrBI CCGCTC 1 cut(s) 2132
BsrDI GCAATG 2 cut(s) 926, 1052
BsrI ACTGG 7 cut(s) 565, 1426, 1717, 1798, 2196, 2249, 2354
BssECI CCNNGG 8 cut(s) 112, 489, 572, 880, 1654, 1931, 1987, 2056
BssNI GRCGYC 1 cut(s) 486
BssT1I CCWWGG 5 cut(s) 572, 1654, 1931, 1987, 2056
Bst2UI CCWGG 4 cut(s) 491, 1046, 1103, 1559
Bst4CI ACNGT 4 cut(s) 94, 1748, 1891, 2290
Bst6I CTCTTC 1 cut(s) 143
BstACI GRCGYC 1 cut(s) 486
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstBAI YACGTR 1 cut(s) 206
BstC8I GCNNGC 4 cut(s) 642, 1062, 1486, 1522
BstDSI CCRYGG 2 cut(s) 1931, 2056
BstENI CCTNNNNNAGG 2 cut(s) 404, 675
BstF5I GGATG 4 cut(s) 14, 66, 1941, 2265
BstFNI CGCG 1 cut(s) 2285
BstMAI GTCTC 2 cut(s) 100, 2140
BstMWI GCNNNNNNNGC 8 cut(s) 49, 114, 400, 767, 1217, 1517, 1922, 2262
BstNI CCWGG 4 cut(s) 491, 1046, 1103, 1559
BstNSI RCATGY 1 cut(s) 1488
BstSCI CCNGG 5 cut(s) 489, 879, 1044, 1101, 1557
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 2 cut(s) 1542, 2170
BstUI CGCG 1 cut(s) 2285
BstV1I GCAGC 6 cut(s) 61, 373, 463, 1069, 1076, 1578
BstV2I GAAGAC 3 cut(s) 239, 1892, 2336
BstX2I RGATCY 6 cut(s) 25, 188, 667, 1041, 1561, 1577
BstYI RGATCY 6 cut(s) 25, 188, 667, 1041, 1561, 1577
BsuI GTATCC 2 cut(s) 487, 1751
BsuRI GGCC 8 cut(s) 117, 1196, 1380, 1540, 1557, 1992, 2055, 2168
BtgI CCRYGG 2 cut(s) 1931, 2056
BtsCI GGATG 4 cut(s) 14, 66, 1941, 2265
BtsI GCAGTG 1 cut(s) 445
BtsIMutI CAGTG 7 cut(s) 445, 558, 1419, 1882, 2203, 2326, 2347
BtuMI TCGCGA 1 cut(s) 2285
Cac8I GCNNGC 4 cut(s) 642, 1062, 1486, 1522
CaiI CAGNNNCTG 2 cut(s) 671, 1108
CciI TCATGA 2 cut(s) 1959, 2062
Cfr13I GGNCC 8 cut(s) 277, 508, 793, 1538, 1539, 1642, 2166, 2167
CseI GACGC 2 cut(s) 494, 2330
Csp6I GTAC 3 cut(s) 1928, 2093, 2123
CviQI GTAC 3 cut(s) 1928, 2093, 2123
DraIII CACNNNGTG 1 cut(s) 2353
EaeI YGGCCR 3 cut(s) 1194, 1378, 2053
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
EciI GGCGGA 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 5 cut(s) 572, 1654, 1931, 1987, 2056
Eco24I GRGCYC 4 cut(s) 155, 318, 1542, 2170
Eco31I GGTCTC 1 cut(s) 2140
Eco32I GATATC 1 cut(s) 1357
Eco47I GGWCC 4 cut(s) 277, 508, 793, 1642
Eco53kI GAGCTC 1 cut(s) 316
Eco88I CYCGRG 1 cut(s) 317
EcoICRI GAGCTC 1 cut(s) 316
EcoNI CCTNNNNNAGG 2 cut(s) 404, 675
EcoO109I RGGNCCY 3 cut(s) 793, 1538, 2167
EcoRI GAATTC 2 cut(s) 2038, 2357
EcoRII CCWGG 4 cut(s) 489, 1044, 1101, 1557
EcoRV GATATC 1 cut(s) 1357
EcoT14I CCWWGG 5 cut(s) 572, 1654, 1931, 1987, 2056
EcoT22I ATGCAT 2 cut(s) 1186, 1486
EcoT38I GRGCYC 4 cut(s) 155, 318, 1542, 2170
ErhI CCWWGG 5 cut(s) 572, 1654, 1931, 1987, 2056
Esp3I CGTCTC 1 cut(s) 100
FaqI GGGAC 2 cut(s) 1290, 1436
FauI CCCGC 1 cut(s) 1053
FauNDI CATATG 3 cut(s) 1186, 1480, 1999
Fnu4HI GCNGC 6 cut(s) 50, 362, 452, 1058, 1065, 1592
FokI GGATG 4 cut(s) 21, 53, 1948, 2252
FriOI GRGCYC 4 cut(s) 155, 318, 1542, 2170
Fsp4HI GCNGC 6 cut(s) 50, 362, 452, 1058, 1065, 1592
FspBI CTAG 2 cut(s) 618, 1856
GluI GCNGC 6 cut(s) 50, 362, 452, 1058, 1065, 1592
GsuI CTGGAG 2 cut(s) 317, 741
HaeIII GGCC 8 cut(s) 117, 1196, 1380, 1540, 1557, 1992, 2055, 2168
HapII CCGG 1 cut(s) 880
HgaI GACGC 2 cut(s) 494, 2330
Hin1I GRCGYC 1 cut(s) 486
HpaII CCGG 1 cut(s) 880
HphI GGTGA 9 cut(s) 82, 206, 323, 425, 491, 946, 1019, 1280, 1871
Hpy166II GTNNAC 4 cut(s) 803, 836, 1155, 1791
Hpy188I TCNGA 9 cut(s) 40, 162, 180, 258, 844, 1704, 1773, 1884, 2188
Hpy188III TCNNGA 9 cut(s) 58, 296, 720, 1169, 1205, 1960, 2063, 2221, 2284
Hpy8I GTNNAC 4 cut(s) 803, 836, 1155, 1791
HpyAV CCTTC 3 cut(s) 253, 934, 2339
HpyCH4III ACNGT 4 cut(s) 94, 1748, 1891, 2290
HpyCH4IV ACGT 3 cut(s) 205, 214, 1707
HpyF10VI GCNNNNNNNGC 8 cut(s) 49, 114, 400, 767, 1217, 1517, 1922, 2262
HpySE526I ACGT 3 cut(s) 205, 214, 1707
Hsp92I GRCGYC 1 cut(s) 486
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 4 cut(s) 40, 767, 1091, 2129
Lsp1109I GCAGC 6 cut(s) 61, 373, 463, 1069, 1076, 1578
LweI GCATC 6 cut(s) 748, 1040, 1171, 1498, 1926, 2274
MaeI CTAG 2 cut(s) 618, 1856
MaeII ACGT 3 cut(s) 205, 214, 1707
MaeIII GTNAC 5 cut(s) 661, 673, 776, 985, 2387
MbiI CCGCTC 1 cut(s) 2132
MflI RGATCY 6 cut(s) 25, 188, 667, 1041, 1561, 1577
MhlI GDGCHC 4 cut(s) 155, 318, 1542, 2170
MlsI TGGCCA 2 cut(s) 1196, 2055
MluNI TGGCCA 2 cut(s) 1196, 2055
MlyI GAGTC 3 cut(s) 86, 1027, 1067
MmeI TCCRAC 4 cut(s) 18, 995, 1069, 1101
Mox20I TGGCCA 2 cut(s) 1196, 2055
Mph1103I ATGCAT 2 cut(s) 1186, 1486
MscI TGGCCA 2 cut(s) 1196, 2055
MslI CAYNNNNRTG 5 cut(s) 477, 1364, 1483, 2061, 2424
Msp20I TGGCCA 2 cut(s) 1196, 2055
MspA1I CMGCKG 3 cut(s) 431, 1060, 1732
MspI CCGG 1 cut(s) 880
MspR9I CCNGG 5 cut(s) 491, 881, 1046, 1103, 1559
MvaI CCWGG 4 cut(s) 491, 1046, 1103, 1559
MvnI CGCG 1 cut(s) 2285
MwoI GCNNNNNNNGC 8 cut(s) 49, 114, 400, 767, 1217, 1517, 1922, 2262
NciI CCSGG 1 cut(s) 881
NcoI CCATGG 2 cut(s) 1931, 2056
NdeI CATATG 3 cut(s) 1186, 1480, 1999
NlaIV GGNNCC 8 cut(s) 42, 769, 1539, 1540, 1563, 1715, 1985, 2168
NmeAIII GCCGAG 4 cut(s) 84, 93, 1529, 1960
NmuCI GTSAC 1 cut(s) 673
NruI TCGCGA 1 cut(s) 2285
NsiI ATGCAT 2 cut(s) 1186, 1486
NspI RCATGY 1 cut(s) 1488
PacI TTAATTAA 1 cut(s) 1530
PaeI GCATGC 1 cut(s) 1488
PaeR7I CTCGAG 1 cut(s) 317
PagI TCATGA 2 cut(s) 1959, 2062
PciSI GCTCTTC 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PfeI GAWTC 7 cut(s) 464, 515, 601, 655, 742, 925, 1942
PfoI TCCNGGA 1 cut(s) 1044
PkrI GCNGC 6 cut(s) 51, 363, 453, 1059, 1066, 1593
PleI GAGTC 3 cut(s) 85, 1026, 1067
PpsI GAGTC 3 cut(s) 85, 1026, 1067
Ppu21I YACGTR 1 cut(s) 206
PpuMI RGGWCCY 1 cut(s) 793
PshBI ATTAAT 2 cut(s) 339, 819
Psp124BI GAGCTC 1 cut(s) 318
Psp1406I AACGTT 1 cut(s) 1707
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 4 cut(s) 489, 1044, 1101, 1557
PspGI CCWGG 4 cut(s) 489, 1044, 1101, 1557
PspN4I GGNNCC 8 cut(s) 42, 769, 1539, 1540, 1563, 1715, 1985, 2168
PspOMI GGGCCC 2 cut(s) 1538, 2166
PspPI GGNCC 8 cut(s) 277, 508, 793, 1538, 1539, 1642, 2166, 2167
PspPPI RGGWCCY 1 cut(s) 793
PspXI VCTCGAGB 1 cut(s) 317
PstNI CAGNNNCTG 2 cut(s) 671, 1108
PsuI RGATCY 6 cut(s) 25, 188, 667, 1041, 1561, 1577
PvuII CAGCTG 2 cut(s) 431, 1732
RruI TCGCGA 1 cut(s) 2285
RsaI GTAC 3 cut(s) 1929, 2094, 2124
RsaNI GTAC 3 cut(s) 1928, 2093, 2123
RseI CAYNNNNRTG 5 cut(s) 477, 1364, 1483, 2061, 2424
SacI GAGCTC 1 cut(s) 318
SapI GCTCTTC 1 cut(s) 143
SatI GCNGC 6 cut(s) 50, 362, 452, 1058, 1065, 1592
Sau96I GGNCC 8 cut(s) 277, 508, 793, 1538, 1539, 1642, 2166, 2167
SchI GAGTC 3 cut(s) 86, 1027, 1067
ScrFI CCNGG 5 cut(s) 491, 881, 1046, 1103, 1559
SduI GDGCHC 4 cut(s) 155, 318, 1542, 2170
SfaNI GCATC 6 cut(s) 748, 1040, 1171, 1498, 1926, 2274
SfcI CTRYAG 1 cut(s) 858
Sfr274I CTCGAG 1 cut(s) 317
SinI GGWCC 4 cut(s) 277, 508, 793, 1642
SlaI CTCGAG 1 cut(s) 317
SmiMI CAYNNNNRTG 5 cut(s) 477, 1364, 1483, 2061, 2424
SmlI CTYRAG 3 cut(s) 317, 1083, 2009
SmoI CTYRAG 3 cut(s) 317, 1083, 2009
SphI GCATGC 1 cut(s) 1488
SsiI CCGC 6 cut(s) 81, 275, 1060, 1127, 1141, 2132
SspMI CTAG 2 cut(s) 618, 1856
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 5 cut(s) 489, 879, 1044, 1101, 1557
StyI CCWWGG 5 cut(s) 572, 1654, 1931, 1987, 2056
TaaI ACNGT 4 cut(s) 94, 1748, 1891, 2290
TaiI ACGT 3 cut(s) 208, 217, 1710
TaqI TCGA 5 cut(s) 75, 318, 610, 1034, 2158
TatI WGTACW 1 cut(s) 2122
TfiI GAWTC 7 cut(s) 464, 515, 601, 655, 742, 925, 1942
TscAI CASTG 7 cut(s) 445, 565, 1426, 1882, 2203, 2326, 2354
TseFI GTSAC 1 cut(s) 673
TseI GCWGC 6 cut(s) 49, 361, 451, 1057, 1064, 1591
Tsp45I GTSAC 1 cut(s) 673
TspRI CASTG 7 cut(s) 445, 565, 1426, 1882, 2203, 2326, 2354
VpaK11BI GGWCC 4 cut(s) 277, 508, 793, 1642
VspI ATTAAT 2 cut(s) 339, 819
XagI CCTNNNNNAGG 2 cut(s) 404, 675
XapI RAATTY 4 cut(s) 750, 2038, 2075, 2357
XceI RCATGY 1 cut(s) 1488
XcmI CCANNNNNNNNNTGG 2 cut(s) 1652, 2054
XhoI CTCGAG 1 cut(s) 317
XspI CTAG 2 cut(s) 618, 1856
Zsp2I ATGCAT 2 cut(s) 1186, 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.