Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21410 AT4G39080 |
| fragaria_vesca | FvH4_2g09950 FvH4_2g09950 FvH4_2g38960 FvH4_2g38960 |
| malus_domestica | MD00G1085500.v1.1 MD08G1021400.v1.1 MD10G1066800.v1.1 |
| prunus_persica | Prupe.1G371400_v2.0.a1 Prupe.1G371400_v2.0.a1 Prupe.8G088600_v2.0.a1 |
| pyrus_communis | pycom05g04990 pycom08g01690 pycom10g05220 |
| rosa_chinensis | RchiOBHm_Chr6g0266851 RchiOBHm_Chr6g0302051 |
| rosa_laevigata | RLG00000011199 RLG00000014073 |
| rosa_multiflora | Rmu_sc0013959.1_g000004 Rmu_ssc0000160.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00166130 Rroxscaffold_7G00201430 |
| rosa_rugosa | Rorug06G0027500 Rorug06G0311400 Rorug06G0311500 |
| rosa_samantha | Rh6AG148400 Rh6AG424200 Rh6BG149400 Rh6BG478200 Rh6CG437200 Rh6DG133500 Rh6DG424300 |
| rosa_wichuraiana | Rw6G012850 Rw6G036740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2001 |
| Acc65I | GGTACC | 1 cut(s) | 1725 |
| AccB1I | GGYRCC | 3 cut(s) | 1103, 1497, 1725 |
| AccI | GTMKAC | 2 cut(s) | 269, 1236 |
| AciI | CCGC | 4 cut(s) | 37, 146, 329, 1153 |
| AclWI | GGATC | 5 cut(s) | 36, 533, 674, 1568, 1581 |
| AcoI | YGGCCR | 3 cut(s) | 3, 916, 1390 |
| AcsI | RAATTY | 8 cut(s) | 753, 1163, 1451, 1697, 1898, 2081, 2087, 2405 |
| AcuI | CTGAAG | 3 cut(s) | 668, 881, 1889 |
| AcyI | GRCGYC | 1 cut(s) | 1104 |
| AdeI | CACNNNGTG | 1 cut(s) | 2365 |
| AfaI | GTAC | 2 cut(s) | 1727, 2106 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 264, 609, 689 |
| AflIII | ACRYGT | 3 cut(s) | 972, 981, 1842 |
| AjnI | CCWGG | 3 cut(s) | 1113, 1228, 2240 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1368, 1400 |
| AleI | CACNNNNGTG | 1 cut(s) | 2028 |
| Alw21I | GWGCWC | 2 cut(s) | 1805, 2139 |
| Alw26I | GTCTC | 4 cut(s) | 90, 457, 1987, 2318 |
| Alw44I | GTGCAC | 1 cut(s) | 1801 |
| AlwI | GGATC | 5 cut(s) | 36, 533, 674, 1568, 1581 |
| Ama87I | CYCGRG | 2 cut(s) | 560, 630 |
| AoxI | GGCC | 6 cut(s) | 3, 118, 916, 1288, 1390, 1481 |
| ApaLI | GTGCAC | 1 cut(s) | 1801 |
| ApeKI | GCWGC | 7 cut(s) | 34, 449, 452, 478, 1515, 1981, 2017 |
| ApoI | RAATTY | 8 cut(s) | 753, 1163, 1451, 1697, 1898, 2081, 2087, 2405 |
| AseI | ATTAAT | 1 cut(s) | 345 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 612, 850 |
| Asp718I | GGTACC | 1 cut(s) | 1725 |
| AspLEI | GCGC | 4 cut(s) | 61, 1106, 1417, 2396 |
| AspS9I | GGNCC | 5 cut(s) | 1288, 1481, 1546, 1596, 2050 |
| AsuC2I | CCSGG | 3 cut(s) | 631, 632, 1594 |
| AsuHPI | GGTGA | 5 cut(s) | 329, 958, 1883, 2042, 2083 |
| AvaI | CYCGRG | 2 cut(s) | 560, 630 |
| AvaII | GGWCC | 3 cut(s) | 1546, 1596, 2050 |
| BaeGI | GKGCMC | 2 cut(s) | 1805, 2182 |
| BalI | TGGCCA | 1 cut(s) | 918 |
| BamHI | GGATCC | 1 cut(s) | 1573 |
| BanI | GGYRCC | 3 cut(s) | 1103, 1497, 1725 |
| BanII | GRGCYC | 1 cut(s) | 158 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 318, 350 |
| Bbv12I | GWGCWC | 2 cut(s) | 1805, 2139 |
| BbvI | GCAGC | 7 cut(s) | 21, 436, 464, 490, 1527, 1993, 2004 |
| BccI | CCATC | 8 cut(s) | 19, 104, 550, 927, 1405, 1492, 2064, 2314 |
| BceAI | ACGGC | 2 cut(s) | 1377, 1485 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 13, 47 |
| BciT130I | CCWGG | 3 cut(s) | 1115, 1230, 2242 |
| BcnI | CCSGG | 3 cut(s) | 631, 632, 1594 |
| BcoDI | GTCTC | 4 cut(s) | 90, 457, 1987, 2318 |
| BfaI | CTAG | 5 cut(s) | 338, 585, 1350, 2237, 2315 |
| BfmI | CTRYAG | 4 cut(s) | 407, 450, 1513, 1527 |
| BfoI | RGCGCY | 3 cut(s) | 1107, 1418, 2397 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1767 |
| BglII | AGATCT | 1 cut(s) | 136 |
| BisI | GCNGC | 7 cut(s) | 35, 450, 453, 479, 1516, 1982, 2018 |
| BlpI | GCTNAGC | 1 cut(s) | 456 |
| BlsI | GCNGC | 7 cut(s) | 36, 451, 454, 480, 1517, 1983, 2019 |
| Bme1390I | CCNGG | 6 cut(s) | 631, 632, 1115, 1230, 1594, 2242 |
| Bme18I | GGWCC | 3 cut(s) | 1546, 1596, 2050 |
| BmeT110I | CYCGRG | 2 cut(s) | 560, 630 |
| BmgT120I | GGNCC | 5 cut(s) | 1288, 1481, 1546, 1596, 2050 |
| BmiI | GGNNCC | 8 cut(s) | 45, 938, 1105, 1289, 1499, 1575, 1591, 1727 |
| BmrFI | CCNGG | 6 cut(s) | 631, 632, 1115, 1230, 1594, 2242 |
| BmrI | ACTGGG | 1 cut(s) | 2371 |
| BmsI | GCATC | 6 cut(s) | 865, 1052, 1085, 1183, 1510, 1938 |
| BmuI | ACTGGG | 1 cut(s) | 2371 |
| BpmI | CTGGAG | 1 cut(s) | 753 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 456 |
| BpuEI | CTTGAG | 3 cut(s) | 1080, 1870, 2371 |
| BpuMI | CCSGG | 3 cut(s) | 631, 632, 1594 |
| Bsa29I | ATCGAT | 1 cut(s) | 596 |
| BsaAI | YACGTR | 1 cut(s) | 2014 |
| BsaBI | GATNNNNATC | 3 cut(s) | 288, 1637, 1824 |
| BsaHI | GRCGYC | 1 cut(s) | 1104 |
| BsaJI | CCNNGG | 9 cut(s) | 106, 630, 631, 1291, 1549, 1943, 1999, 2094, 2241 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 83, 113, 684, 714, 1328, 1358 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 264, 609, 689 |
| Bse1I | ACTGG | 3 cut(s) | 1810, 2208, 2366 |
| Bse3DI | GCAATG | 1 cut(s) | 286 |
| Bse8I | GATNNNNATC | 3 cut(s) | 288, 1637, 1824 |
| BseBI | CCWGG | 3 cut(s) | 1115, 1230, 2242 |
| BseCI | ATCGAT | 1 cut(s) | 596 |
| BseDI | CCNNGG | 9 cut(s) | 106, 630, 631, 1291, 1549, 1943, 1999, 2094, 2241 |
| BseGI | GGATG | 5 cut(s) | 69, 1076, 1198, 1953, 2449 |
| BseJI | GATNNNNATC | 3 cut(s) | 288, 1637, 1824 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 264, 609, 689 |
| BseMI | GCAATG | 1 cut(s) | 286 |
| BseMII | CTCAG | 5 cut(s) | 194, 470, 1754, 2197, 2446 |
| BseNI | ACTGG | 3 cut(s) | 1810, 2208, 2366 |
| BseRI | GAGGAG | 1 cut(s) | 2003 |
| BseSI | GKGCMC | 2 cut(s) | 1805, 2182 |
| BseXI | GCAGC | 7 cut(s) | 21, 436, 464, 490, 1527, 1993, 2004 |
| Bsh1285I | CGRYCG | 1 cut(s) | 41 |
| BshFI | GGCC | 6 cut(s) | 5, 120, 918, 1290, 1392, 1483 |
| BshNI | GGYRCC | 3 cut(s) | 1103, 1497, 1725 |
| BshVI | ATCGAT | 1 cut(s) | 596 |
| BsiEI | CGRYCG | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1805, 2139 |
| BsiHKCI | CYCGRG | 2 cut(s) | 560, 630 |
| BsiSI | CCGG | 3 cut(s) | 6, 631, 1594 |
| BslFI | GGGAC | 2 cut(s) | 1379, 1448 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 264, 609, 689 |
| BsmAI | GTCTC | 4 cut(s) | 90, 457, 1987, 2318 |
| BsmBI | CGTCTC | 1 cut(s) | 90 |
| BsmFI | GGGAC | 2 cut(s) | 1379, 1448 |
| BsnI | GGCC | 6 cut(s) | 5, 120, 918, 1290, 1392, 1483 |
| BsoBI | CYCGRG | 2 cut(s) | 560, 630 |
| Bsp1286I | GDGCHC | 4 cut(s) | 158, 1805, 2139, 2182 |
| Bsp1407I | TGTACA | 1 cut(s) | 2104 |
| Bsp143I | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 456 |
| Bsp19I | CCATGG | 2 cut(s) | 1291, 1943 |
| BspACI | CCGC | 4 cut(s) | 37, 146, 329, 1153 |
| BspANI | GGCC | 6 cut(s) | 5, 120, 918, 1290, 1392, 1483 |
| BspCNI | CTCAG | 5 cut(s) | 193, 469, 1753, 2196, 2445 |
| BspDI | ATCGAT | 1 cut(s) | 596 |
| BspHI | TCATGA | 1 cut(s) | 2074 |
| BspLI | GGNNCC | 8 cut(s) | 45, 938, 1105, 1289, 1499, 1575, 1591, 1727 |
| BspMAI | CTGCAG | 3 cut(s) | 411, 454, 1517 |
| BspPI | GGATC | 5 cut(s) | 36, 533, 674, 1568, 1581 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BspT107I | GGYRCC | 3 cut(s) | 1103, 1497, 1725 |
| BsrDI | GCAATG | 1 cut(s) | 286 |
| BsrGI | TGTACA | 1 cut(s) | 2104 |
| BsrI | ACTGG | 3 cut(s) | 1810, 2208, 2366 |
| BssECI | CCNNGG | 9 cut(s) | 106, 630, 631, 1291, 1549, 1943, 1999, 2094, 2241 |
| BssMI | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| BssNAI | GTATAC | 1 cut(s) | 1237 |
| BssNI | GRCGYC | 1 cut(s) | 1104 |
| BssT1I | CCWWGG | 3 cut(s) | 1291, 1943, 1999 |
| Bst1107I | GTATAC | 1 cut(s) | 1237 |
| Bst2UI | CCWGG | 3 cut(s) | 1115, 1230, 2242 |
| Bst6I | CTCTTC | 3 cut(s) | 146, 2040, 2433 |
| BstACI | GRCGYC | 1 cut(s) | 1104 |
| BstAUI | TGTACA | 1 cut(s) | 2104 |
| BstBAI | YACGTR | 1 cut(s) | 2014 |
| BstC8I | GCNNGC | 6 cut(s) | 208, 212, 247, 418, 654, 1311 |
| BstDEI | CTNAG | 5 cut(s) | 180, 456, 1740, 2183, 2432 |
| BstDSI | CCRYGG | 3 cut(s) | 1291, 1549, 1943 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 262, 607, 687 |
| BstF5I | GGATG | 5 cut(s) | 69, 1076, 1198, 1953, 2449 |
| BstH2I | RGCGCY | 3 cut(s) | 1107, 1418, 2397 |
| BstHHI | GCGC | 4 cut(s) | 61, 1106, 1417, 2396 |
| BstKTI | GATC | 8 cut(s) | 31, 115, 139, 186, 292, 541, 682, 1576 |
| BstMAI | GTCTC | 4 cut(s) | 90, 457, 1987, 2318 |
| BstMBI | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| BstMCI | CGRYCG | 1 cut(s) | 41 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 43, 58, 117, 556, 779, 1767, 1934, 1948 |
| BstNI | CCWGG | 3 cut(s) | 1115, 1230, 2242 |
| BstNSI | RCATGY | 4 cut(s) | 554, 985, 1846, 2348 |
| BstSCI | CCNGG | 6 cut(s) | 629, 630, 1113, 1228, 1592, 2240 |
| BstSFI | CTRYAG | 4 cut(s) | 407, 450, 1513, 1527 |
| BstSLI | GKGCMC | 2 cut(s) | 1805, 2182 |
| BstV1I | GCAGC | 7 cut(s) | 21, 436, 464, 490, 1527, 1993, 2004 |
| BstX2I | RGATCY | 4 cut(s) | 28, 136, 538, 1573 |
| BstYI | RGATCY | 4 cut(s) | 28, 136, 538, 1573 |
| BstZ17I | GTATAC | 1 cut(s) | 1237 |
| Bsu15I | ATCGAT | 1 cut(s) | 596 |
| BsuRI | GGCC | 6 cut(s) | 5, 120, 918, 1290, 1392, 1483 |
| BsuTUI | ATCGAT | 1 cut(s) | 596 |
| BtgI | CCRYGG | 3 cut(s) | 1291, 1549, 1943 |
| BtgZI | GCGATG | 1 cut(s) | 1533 |
| BtsCI | GGATG | 5 cut(s) | 69, 1076, 1198, 1953, 2449 |
| BtsI | GCAGTG | 2 cut(s) | 451, 2151 |
| BtsIMutI | CAGTG | 8 cut(s) | 385, 451, 1536, 1803, 2151, 2215, 2359, 2440 |
| Cac8I | GCNNGC | 6 cut(s) | 208, 212, 247, 418, 654, 1311 |
| CciI | TCATGA | 1 cut(s) | 2074 |
| CfoI | GCGC | 4 cut(s) | 61, 1106, 1417, 2396 |
| Cfr13I | GGNCC | 5 cut(s) | 1288, 1481, 1546, 1596, 2050 |
| Cfr9I | CCCGGG | 1 cut(s) | 630 |
| ClaI | ATCGAT | 1 cut(s) | 596 |
| CpoI | CGGWCCG | 1 cut(s) | 1596 |
| Csp6I | GTAC | 2 cut(s) | 1726, 2105 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 175, 210 |
| CspI | CGGWCCG | 1 cut(s) | 1596 |
| CviQI | GTAC | 2 cut(s) | 1726, 2105 |
| DdeI | CTNAG | 5 cut(s) | 180, 456, 1740, 2183, 2432 |
| DinI | GGCGCC | 1 cut(s) | 1105 |
| DpnI | GATC | 8 cut(s) | 30, 114, 138, 185, 291, 540, 681, 1575 |
| DpnII | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| DraI | TTTAAA | 1 cut(s) | 1755 |
| DraIII | CACNNNGTG | 1 cut(s) | 2365 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2001 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2001 |
| EaeI | YGGCCR | 3 cut(s) | 3, 916, 1390 |
| Eam1104I | CTCTTC | 3 cut(s) | 146, 2040, 2433 |
| EarI | CTCTTC | 3 cut(s) | 146, 2040, 2433 |
| Eco130I | CCWWGG | 3 cut(s) | 1291, 1943, 1999 |
| Eco24I | GRGCYC | 1 cut(s) | 158 |
| Eco47I | GGWCC | 3 cut(s) | 1546, 1596, 2050 |
| Eco57I | CTGAAG | 3 cut(s) | 668, 881, 1889 |
| Eco88I | CYCGRG | 2 cut(s) | 560, 630 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 262, 607, 687 |
| EcoRI | GAATTC | 2 cut(s) | 1451, 2087 |
| EcoRII | CCWGG | 3 cut(s) | 1113, 1228, 2240 |
| EcoT14I | CCWWGG | 3 cut(s) | 1291, 1943, 1999 |
| EcoT22I | ATGCAT | 2 cut(s) | 1045, 1198 |
| EcoT38I | GRGCYC | 1 cut(s) | 158 |
| EgeI | GGCGCC | 1 cut(s) | 1105 |
| EheI | GGCGCC | 1 cut(s) | 1105 |
| ErhI | CCWWGG | 3 cut(s) | 1291, 1943, 1999 |
| Esp3I | CGTCTC | 1 cut(s) | 90 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 233, 265 |
| FaqI | GGGAC | 2 cut(s) | 1379, 1448 |
| FauNDI | CATATG | 1 cut(s) | 172 |
| FblI | GTMKAC | 2 cut(s) | 269, 1236 |
| Fnu4HI | GCNGC | 7 cut(s) | 35, 450, 453, 479, 1516, 1982, 2018 |
| FokI | GGATG | 4 cut(s) | 56, 1063, 1205, 1960 |
| FriOI | GRGCYC | 1 cut(s) | 158 |
| Fsp4HI | GCNGC | 7 cut(s) | 35, 450, 453, 479, 1516, 1982, 2018 |
| FspBI | CTAG | 5 cut(s) | 338, 585, 1350, 2237, 2315 |
| GlaI | GCGC | 4 cut(s) | 60, 1105, 1416, 2395 |
| GluI | GCNGC | 7 cut(s) | 35, 450, 453, 479, 1516, 1982, 2018 |
| GsuI | CTGGAG | 1 cut(s) | 753 |
| HaeII | RGCGCY | 3 cut(s) | 1107, 1418, 2397 |
| HaeIII | GGCC | 6 cut(s) | 5, 120, 918, 1290, 1392, 1483 |
| HapII | CCGG | 3 cut(s) | 6, 631, 1594 |
| HhaI | GCGC | 4 cut(s) | 61, 1106, 1417, 2396 |
| Hin1I | GRCGYC | 1 cut(s) | 1104 |
| Hin6I | GCGC | 4 cut(s) | 59, 1104, 1415, 2394 |
| HinP1I | GCGC | 4 cut(s) | 59, 1104, 1415, 2394 |
| HindIII | AAGCTT | 1 cut(s) | 771 |
| HinfI | GANTC | 9 cut(s) | 80, 613, 882, 1054, 1133, 1663, 1671, 1852, 2227 |
| HpaII | CCGG | 3 cut(s) | 6, 631, 1594 |
| HphI | GGTGA | 5 cut(s) | 329, 958, 1883, 2042, 2083 |
| Hpy166II | GTNNAC | 6 cut(s) | 270, 320, 1237, 1803, 1811, 2107 |
| Hpy8I | GTNNAC | 6 cut(s) | 270, 320, 1237, 1803, 1811, 2107 |
| HpyAV | CCTTC | 6 cut(s) | 235, 406, 946, 950, 1016, 1913 |
| HpyCH4IV | ACGT | 4 cut(s) | 217, 974, 2013, 2170 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 43, 58, 117, 556, 779, 1767, 1934, 1948 |
| HpyF3I | CTNAG | 5 cut(s) | 180, 456, 1740, 2183, 2432 |
| HpySE526I | ACGT | 4 cut(s) | 217, 974, 2013, 2170 |
| Hsp92I | GRCGYC | 1 cut(s) | 1104 |
| HspAI | GCGC | 4 cut(s) | 59, 1104, 1415, 2394 |
| KasI | GGCGCC | 1 cut(s) | 1103 |
| KpnI | GGTACC | 1 cut(s) | 1729 |
| Kzo9I | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 5 cut(s) | 43, 229, 331, 894, 2141 |
| Lsp1109I | GCAGC | 7 cut(s) | 21, 436, 464, 490, 1527, 1993, 2004 |
| LweI | GCATC | 6 cut(s) | 865, 1052, 1085, 1183, 1510, 1938 |
| MaeI | CTAG | 5 cut(s) | 338, 585, 1350, 2237, 2315 |
| MaeII | ACGT | 4 cut(s) | 217, 974, 2013, 2170 |
| MaeIII | GTNAC | 8 cut(s) | 788, 997, 1246, 1502, 1602, 1682, 1914, 2399 |
| MalI | GATC | 8 cut(s) | 30, 114, 138, 185, 291, 540, 681, 1575 |
| MboI | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| MfeI | CAATTG | 2 cut(s) | 53, 912 |
| MflI | RGATCY | 4 cut(s) | 28, 136, 538, 1573 |
| MhlI | GDGCHC | 4 cut(s) | 158, 1805, 2139, 2182 |
| MlsI | TGGCCA | 1 cut(s) | 918 |
| MluNI | TGGCCA | 1 cut(s) | 918 |
| Mly113I | GGCGCC | 1 cut(s) | 1104 |
| MlyI | GAGTC | 2 cut(s) | 876, 1861 |
| MmeI | TCCRAC | 3 cut(s) | 21, 44, 2284 |
| Mox20I | TGGCCA | 1 cut(s) | 918 |
| Mph1103I | ATGCAT | 2 cut(s) | 1045, 1198 |
| MroXI | GAANNNNTTC | 2 cut(s) | 612, 850 |
| MscI | TGGCCA | 1 cut(s) | 918 |
| MseI | TTAA | 7 cut(s) | 345, 555, 977, 986, 1614, 1689, 1754 |
| MslI | CAYNNNNRTG | 4 cut(s) | 924, 995, 2028, 2073 |
| Msp20I | TGGCCA | 1 cut(s) | 918 |
| MspI | CCGG | 3 cut(s) | 6, 631, 1594 |
| MspR9I | CCNGG | 6 cut(s) | 631, 632, 1115, 1230, 1594, 2242 |
| MunI | CAATTG | 2 cut(s) | 53, 912 |
| MvaI | CCWGG | 3 cut(s) | 1115, 1230, 2242 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 43, 58, 117, 556, 779, 1767, 1934, 1948 |
| NarI | GGCGCC | 1 cut(s) | 1104 |
| NciI | CCSGG | 3 cut(s) | 631, 632, 1594 |
| NcoI | CCATGG | 2 cut(s) | 1291, 1943 |
| NdeI | CATATG | 1 cut(s) | 172 |
| NdeII | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| NlaIV | GGNNCC | 8 cut(s) | 45, 938, 1105, 1289, 1499, 1575, 1591, 1727 |
| NmeAIII | GCCGAG | 1 cut(s) | 87 |
| NmuCI | GTSAC | 3 cut(s) | 997, 1246, 1502 |
| NsiI | ATGCAT | 2 cut(s) | 1045, 1198 |
| NspI | RCATGY | 4 cut(s) | 554, 985, 1846, 2348 |
| OliI | CACNNNNGTG | 1 cut(s) | 2028 |
| PagI | TCATGA | 1 cut(s) | 2074 |
| PciI | ACATGT | 2 cut(s) | 981, 1842 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 214 |
| PdmI | GAANNNNTTC | 2 cut(s) | 612, 850 |
| PfeI | GAWTC | 7 cut(s) | 80, 613, 1054, 1133, 1663, 1671, 2227 |
| PkrI | GCNGC | 7 cut(s) | 36, 451, 454, 480, 1517, 1983, 2019 |
| PleI | GAGTC | 2 cut(s) | 876, 1860 |
| PluTI | GGCGCC | 1 cut(s) | 1107 |
| PpsI | GAGTC | 2 cut(s) | 876, 1860 |
| Ppu21I | YACGTR | 1 cut(s) | 2014 |
| PscI | ACATGT | 2 cut(s) | 981, 1842 |
| PshBI | ATTAAT | 1 cut(s) | 345 |
| Psp6I | CCWGG | 3 cut(s) | 1113, 1228, 2240 |
| PspGI | CCWGG | 3 cut(s) | 1113, 1228, 2240 |
| PspN4I | GGNNCC | 8 cut(s) | 45, 938, 1105, 1289, 1499, 1575, 1591, 1727 |
| PspPI | GGNCC | 5 cut(s) | 1288, 1481, 1546, 1596, 2050 |
| PstI | CTGCAG | 3 cut(s) | 411, 454, 1517 |
| PsuI | RGATCY | 4 cut(s) | 28, 136, 538, 1573 |
| RsaI | GTAC | 2 cut(s) | 1727, 2106 |
| RsaNI | GTAC | 2 cut(s) | 1726, 2105 |
| RseI | CAYNNNNRTG | 4 cut(s) | 924, 995, 2028, 2073 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1596 |
| RsrII | CGGWCCG | 1 cut(s) | 1596 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 7 cut(s) | 345, 555, 977, 986, 1614, 1689, 1754 |
| SatI | GCNGC | 7 cut(s) | 35, 450, 453, 479, 1516, 1982, 2018 |
| Sau3AI | GATC | 8 cut(s) | 28, 112, 136, 183, 289, 538, 679, 1573 |
| Sau96I | GGNCC | 5 cut(s) | 1288, 1481, 1546, 1596, 2050 |
| SchI | GAGTC | 2 cut(s) | 876, 1861 |
| ScrFI | CCNGG | 6 cut(s) | 631, 632, 1115, 1230, 1594, 2242 |
| SduI | GDGCHC | 4 cut(s) | 158, 1805, 2139, 2182 |
| SfaNI | GCATC | 6 cut(s) | 865, 1052, 1085, 1183, 1510, 1938 |
| SfcI | CTRYAG | 4 cut(s) | 407, 450, 1513, 1527 |
| SfoI | GGCGCC | 1 cut(s) | 1105 |
| SinI | GGWCC | 3 cut(s) | 1546, 1596, 2050 |
| SmaI | CCCGGG | 1 cut(s) | 632 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 924, 995, 2028, 2073 |
| SmlI | CTYRAG | 3 cut(s) | 1095, 1849, 2350 |
| SmoI | CTYRAG | 3 cut(s) | 1095, 1849, 2350 |
| SsiI | CCGC | 4 cut(s) | 37, 146, 329, 1153 |
| SspDI | GGCGCC | 1 cut(s) | 1103 |
| SspMI | CTAG | 5 cut(s) | 338, 585, 1350, 2237, 2315 |
| StyD4I | CCNGG | 6 cut(s) | 629, 630, 1113, 1228, 1592, 2240 |
| StyI | CCWWGG | 3 cut(s) | 1291, 1943, 1999 |
| TaiI | ACGT | 4 cut(s) | 220, 977, 2016, 2173 |
| TaqI | TCGA | 4 cut(s) | 78, 294, 519, 596 |
| TatI | WGTACW | 1 cut(s) | 2104 |
| TfiI | GAWTC | 7 cut(s) | 80, 613, 1054, 1133, 1663, 1671, 2227 |
| Tru1I | TTAA | 7 cut(s) | 345, 555, 977, 986, 1614, 1689, 1754 |
| Tru9I | TTAA | 7 cut(s) | 345, 555, 977, 986, 1614, 1689, 1754 |
| TscAI | CASTG | 8 cut(s) | 385, 451, 1536, 1810, 2151, 2215, 2366, 2440 |
| TseFI | GTSAC | 3 cut(s) | 997, 1246, 1502 |
| TseI | GCWGC | 7 cut(s) | 34, 449, 452, 478, 1515, 1981, 2017 |
| Tsp45I | GTSAC | 3 cut(s) | 997, 1246, 1502 |
| TspDTI | ATGAA | 8 cut(s) | 251, 372, 1315, 1464, 1643, 1676, 2151, 2409 |
| TspGWI | ACGGA | 1 cut(s) | 1538 |
| TspMI | CCCGGG | 1 cut(s) | 630 |
| TspRI | CASTG | 8 cut(s) | 385, 451, 1536, 1810, 2151, 2215, 2366, 2440 |
| VneI | GTGCAC | 1 cut(s) | 1801 |
| VpaK11BI | GGWCC | 3 cut(s) | 1546, 1596, 2050 |
| VspI | ATTAAT | 1 cut(s) | 345 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 262, 607, 687 |
| XapI | RAATTY | 8 cut(s) | 753, 1163, 1451, 1697, 1898, 2081, 2087, 2405 |
| XceI | RCATGY | 4 cut(s) | 554, 985, 1846, 2348 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1664, 1886 |
| XmaI | CCCGGG | 1 cut(s) | 630 |
| XmiI | GTMKAC | 2 cut(s) | 269, 1236 |
| XmnI | GAANNNNTTC | 2 cut(s) | 612, 850 |
| XspI | CTAG | 5 cut(s) | 338, 585, 1350, 2237, 2315 |
| Zsp2I | ATGCAT | 2 cut(s) | 1045, 1198 |