Rorug06G0027500

Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
3324600 .. 3327017
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0027500.1

Sequence Viewer

Length: 1881 bp
ATGGCTGAAGTGATGAAATTGATTGGGCTTTTGTTGGTGTTTCTCTCACTACTTTCTCTCTCTACTGCTCAATCTCCAAAAATAATTAGCAACAGAACAACATGCCCCATTGATCTCAGCTATGTCCTGAGACTCCCCTTCAACTCCTCATCATGCAAAAACTTCCAAGCCCCTCCTAAAACCCCCCAAATGGACACCACCCAGATCCCATGTTGTCAAATCCTATTGTCTCTCTTTGGAATAGGCACTGCTCAACACCTCAACGCCACCACTTTTTTCCAACTCCCCAACATAGCAGCCTCAAATTCTTGCCTCCAGAACTTCCAGTCCAAGCTTACCTCTCTAGCACTCCCTCCTAATCTTGTCTCTTATTGTTTTGACCCTTCACAATTTGTAACTAGCCCCAATTTATGTGCCCAAATTGAGTCTTCCCAAGATTGGGTCTCCAAGCTTAATCAGACCACTGTACTTGACTTTGCATGCAAGCCAGACCTCACTGATCTCTCATCCTGTGATGCTTGCGTAGCGGCTGGCTTTAAAATTCAGCAACAATTAATCGCCATTGATGGTAACAGTTCTCACTCTGGAGATTGTTGGTACTTTACAATTCTTTATGCTGCTGGTATGATCAACAGCTTTGGTCCTGAAAGTCAGGGCGCCATGTCTTGTATTTTTAGTTTATCTTTGGATGTCGCTCTTGTGGGTTTGCGCAAAAAGAGCTATACCGCTCTTGTAACTGCACTAGTCTCAGCAACAGGAGGGTTGCTTACAGTATTATTTTTATACTTCTTATGGAAGAAATCTTTGGGAAAGAAAAGGGCATATAGTGAGAATATTAGGAATGTTAGTGCTGGAGGTGGGAAGAATGATATAGAACTACCGGTCTTAAGTTTAAGGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGCTAATAAACTTGGAGAGGGAGGGTTTGGCCCTGTTTATAAGGGCATCTTAAATGAGAATCTAGAGGTAGCCATAAAAAGACTGTCAAAGAAGTCAGGGCAAGGATATCAAGAGTTCATGAATGAGTTAAAACTTATAGCAAAGCTCCAACACAACAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAAAGGAAGAAATGATATTAATCTACGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCAAGGGAAAACACGAAGTTGGATTGGGGTAAACGCTTTCATATTATGGAAGGTATAGCTCAAGGAGTACTTTATATCCACAAACACTCCAGATTGAAAATCATTCACAGGGATCTAAAAGCAAGTAATGTTCTGTTGGATGAAGCAATGAACCCCAAAATTTCAGATTTTGGAATGGCAAAGATTTTCGAGATAAATCAGACTGAAGCAAATACCAACAGGGTTGTTGGGACATACGGTTACATGTCACCTGAGTATGCACGCTATGGCCATTTTTCTGAGAAATTGGATGTATTCAGTTTTGGAGTGTTGTTGCTGGAGATTGTAAGTGGAAGGAGGAATTTCGCTTTCTATCATCTTGAACACCCACTAACTCTTGCTGGATGGGTATGGAAATTATGGAAAGAAGGTAGAGGATTGGAGGTGATTGATGCATCAGTGAGAGAAACATGTCTGCCTCATGAAGCTTTAAGGTGTATCCATGTAGCATTATTGTGTGTTCAAGAAGATCCAGTTGATCGACCAACAATGTCTTCTGTAGTTCACATGTTGGCTAATGAAGCTACATCACTTCCACTATTCAAAGAGCCTGCATTTTCAACACATAGTAATTATAAAGCTATTTGCTCTTCTTCTCCATCATCTAGCATTTTCTCGAACAATCTGGTAACCATTAGCGTCCCTGAAGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000325 GO:0000331 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006882 GO:0006885 GO:0006897 GO:0006909 GO:0006911 GO:0007035 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009536 GO:0009678 GO:0009705 GO:0009941 GO:0009987 GO:0010008 GO:0010324 GO:0012505 GO:0012506 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019725 GO:0019829 GO:0019899 GO:0022607 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030139 GO:0030641 GO:0030659 GO:0030666 GO:0030670 GO:0031090 GO:0031164 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0032009 GO:0032119 GO:0032991 GO:0033176 GO:0034220 GO:0034622 GO:0034641 GO:0034654 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043181 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044434 GO:0044435 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045335 GO:0045735 GO:0045851 GO:0046034 GO:0046390 GO:0046483 GO:0046916 GO:0046961 GO:0048878 GO:0050801 GO:0051117 GO:0051179 GO:0051234 GO:0051235 GO:0051238 GO:0051452 GO:0051453 GO:0051641 GO:0051651 GO:0055065 GO:0055067 GO:0055069 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0055086 GO:0061024 GO:0065003 GO:0065007 GO:0065008 GO:0070070 GO:0070071 GO:0070072 GO:0071704 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072521 GO:0072522 GO:0090407 GO:0090662 GO:0097708 GO:0098588 GO:0098655 GO:0098657 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0098852 GO:0099024 GO:0099131 GO:0099132 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
Pfam Domains
Protein Families

Protein Analysis

626

Amino Acids

69.38

Weight (kDa)

8.18

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 31 - 198 3.6e-39 SPARK
Pkinase PF00069 309 - 577 9.8e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 311 - 579 4.4e-52 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 969, 1800
Acc16I TGCGCA 1 cut(s) 710
AccB1I GGYRCC 1 cut(s) 656
AccBSI CCGCTC 1 cut(s) 728
AciI CCGC 2 cut(s) 527, 726
AclWI GGATC 4 cut(s) 199, 1178, 1305, 1688
AcoI YGGCCR 1 cut(s) 1453
AcsI RAATTY 5 cut(s) 304, 540, 1172, 1344, 1525
AcuI CTGAAG 3 cut(s) 27, 948, 1410
AcyI GRCGYC 1 cut(s) 657
AfaI GTAC 4 cut(s) 468, 599, 1148, 1254
AfiI CCNNNNNNNGG 3 cut(s) 190, 438, 439
AflII CTTAAG 1 cut(s) 886
AflIII ACRYGT 3 cut(s) 1428, 1634, 1731
AgeI ACCGGT 1 cut(s) 880
AgsI TTSAA 7 cut(s) 142, 1118, 1282, 1547, 1688, 1768, 1785
AhlI ACTAGT 1 cut(s) 742
AjuI GAANNNNNNNTTGG 4 cut(s) 788, 820, 1702, 1734
AloI GAACNNNNNNTCC 2 cut(s) 311, 343
Alw26I GTCTC 5 cut(s) 124, 234, 370, 448, 751
AlwI GGATC 4 cut(s) 199, 1178, 1305, 1688
AoxI GGCC 2 cut(s) 958, 1453
ApeKI GCWGC 3 cut(s) 296, 617, 908
ApoI RAATTY 5 cut(s) 304, 540, 1172, 1344, 1525
AseI ATTAAT 2 cut(s) 554, 1136
AsiGI ACCGGT 1 cut(s) 880
AspLEI GCGC 2 cut(s) 659, 711
AspS9I GGNCC 2 cut(s) 641, 959
AsuHPI GGTGA 2 cut(s) 1425, 1621
AvaII GGWCC 1 cut(s) 641
BaeGI GKGCMC 1 cut(s) 418
BalI TGGCCA 1 cut(s) 1455
BanI GGYRCC 1 cut(s) 656
BbsI GAAGAC 2 cut(s) 420, 1710
BbvI GCAGC 3 cut(s) 308, 604, 895
BccI CCATC 3 cut(s) 560, 1563, 1831
BciVI GTATCC 1 cut(s) 1673
BclI TGATCA 1 cut(s) 627
BcoDI GTCTC 5 cut(s) 124, 234, 370, 448, 751
BcuI ACTAGT 1 cut(s) 742
BfaI CTAG 5 cut(s) 344, 399, 743, 992, 1830
BfmI CTRYAG 1 cut(s) 1722
BfoI RGCGCY 1 cut(s) 660
BfrI CTTAAG 1 cut(s) 886
BfuI GTATCC 1 cut(s) 1673
BisI GCNGC 4 cut(s) 297, 528, 618, 909
BlsI GCNGC 4 cut(s) 298, 529, 619, 910
BmcAI AGTACT 1 cut(s) 1254
Bme18I GGWCC 1 cut(s) 641
BmgT120I GGNCC 2 cut(s) 641, 959
BmiI GGNNCC 1 cut(s) 658
BmsI GCATC 4 cut(s) 505, 984, 1606, 1628
BpiI GAAGAC 2 cut(s) 420, 1710
BpmI CTGGAG 5 cut(s) 299, 606, 873, 1258, 1523
BpuEI CTTGAG 1 cut(s) 1230
BsaBI GATNNNNATC 1 cut(s) 1136
BsaHI GRCGYC 1 cut(s) 657
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 1 cut(s) 1187
BsaWI WCCGGW 1 cut(s) 880
BsaXI ACNNNNNCTCC 2 cut(s) 1256, 1286
Bsc4I CCNNNNNNNGG 3 cut(s) 190, 438, 439
Bse118I RCCGGY 1 cut(s) 880
Bse1I ACTGG 2 cut(s) 325, 1697
Bse3DI GCAATG 1 cut(s) 1338
Bse8I GATNNNNATC 1 cut(s) 1136
BseDI CCNNGG 1 cut(s) 1187
BseGI GGATG 5 cut(s) 506, 694, 1330, 1480, 1574
BseJI GATNNNNATC 1 cut(s) 1136
BseLI CCNNNNNNNGG 3 cut(s) 190, 438, 439
BseMI GCAATG 1 cut(s) 1338
BseMII CTCAG 5 cut(s) 119, 130, 762, 1428, 1455
BseNI ACTGG 2 cut(s) 325, 1697
BseRI GAGGAG 1 cut(s) 136
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 3 cut(s) 308, 604, 895
BsgI GTGCAG 1 cut(s) 723
BshFI GGCC 2 cut(s) 960, 1455
BshNI GGYRCC 1 cut(s) 656
BshTI ACCGGT 1 cut(s) 880
BsiSI CCGG 1 cut(s) 881
BslFI GGGAC 2 cut(s) 1429, 1850
BslI CCNNNNNNNGG 3 cut(s) 190, 438, 439
BsmAI GTCTC 5 cut(s) 124, 234, 370, 448, 751
BsmFI GGGAC 2 cut(s) 1429, 1850
BsnI GGCC 2 cut(s) 960, 1455
Bso31I GGTCTC 1 cut(s) 448
Bsp1286I GDGCHC 1 cut(s) 418
Bsp143I GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
BspACI CCGC 2 cut(s) 527, 726
BspANI GGCC 2 cut(s) 960, 1455
BspCNI CTCAG 5 cut(s) 120, 129, 761, 1429, 1456
BspHI TCATGA 2 cut(s) 1047, 1645
BspLI GGNNCC 1 cut(s) 658
BspPI GGATC 4 cut(s) 199, 1178, 1305, 1688
BspQI GCTCTTC 1 cut(s) 1819
BspT107I GGYRCC 1 cut(s) 656
BspTI CTTAAG 1 cut(s) 886
BspTNI GGTCTC 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 728
BsrDI GCAATG 1 cut(s) 1338
BsrFI RCCGGY 1 cut(s) 880
BsrI ACTGG 2 cut(s) 325, 1697
BssAI RCCGGY 1 cut(s) 880
BssECI CCNNGG 1 cut(s) 1187
BssMI GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
BssNI GRCGYC 1 cut(s) 657
BssT1I CCWWGG 1 cut(s) 1187
Bst4CI ACNGT 5 cut(s) 466, 575, 772, 1014, 1424
Bst6I CTCTTC 1 cut(s) 1819
BstACI GRCGYC 1 cut(s) 657
BstAFI CTTAAG 1 cut(s) 886
BstC8I GCNNGC 6 cut(s) 481, 485, 520, 532, 1447, 1776
BstDEI CTNAG 5 cut(s) 116, 128, 748, 1437, 1464
BstEII GGTNACC 1 cut(s) 1852
BstF5I GGATG 5 cut(s) 506, 694, 1330, 1480, 1574
BstH2I RGCGCY 1 cut(s) 660
BstHHI GCGC 2 cut(s) 659, 711
BstKTI GATC 8 cut(s) 115, 207, 502, 630, 1186, 1300, 1696, 1705
BstMAI GTCTC 5 cut(s) 124, 234, 370, 448, 751
BstMBI GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
BstMWI GCNNNNNNNGC 3 cut(s) 524, 717, 1745
BstNSI RCATGY 6 cut(s) 105, 483, 1153, 1432, 1638, 1735
BstPI GGTNACC 1 cut(s) 1852
BstSFI CTRYAG 1 cut(s) 1722
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 3 cut(s) 308, 604, 895
BstV2I GAAGAC 2 cut(s) 420, 1710
BstX2I RGATCY 3 cut(s) 204, 1297, 1693
BstYI RGATCY 3 cut(s) 204, 1297, 1693
BsuI GTATCC 1 cut(s) 1673
BsuRI GGCC 2 cut(s) 960, 1455
BtsCI GGATG 5 cut(s) 506, 694, 1330, 1480, 1574
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 4 cut(s) 246, 462, 495, 1629
Cac8I GCNNGC 6 cut(s) 481, 485, 520, 532, 1447, 1776
CciI TCATGA 2 cut(s) 1047, 1645
CfoI GCGC 2 cut(s) 659, 711
Cfr10I RCCGGY 1 cut(s) 880
Cfr13I GGNCC 2 cut(s) 641, 959
CseI GACGC 1 cut(s) 1852
Csp6I GTAC 4 cut(s) 467, 598, 1147, 1253
CspAI ACCGGT 1 cut(s) 880
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviQI GTAC 4 cut(s) 467, 598, 1147, 1253
DdeI CTNAG 5 cut(s) 116, 128, 748, 1437, 1464
DinI GGCGCC 1 cut(s) 658
DpnI GATC 8 cut(s) 114, 206, 501, 629, 1185, 1299, 1695, 1704
DpnII GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
DraI TTTAAA 1 cut(s) 538
EaeI YGGCCR 1 cut(s) 1453
Eam1104I CTCTTC 1 cut(s) 1819
EarI CTCTTC 1 cut(s) 1819
Eco130I CCWWGG 1 cut(s) 1187
Eco31I GGTCTC 1 cut(s) 448
Eco32I GATATC 1 cut(s) 1037
Eco47I GGWCC 1 cut(s) 641
Eco57I CTGAAG 3 cut(s) 27, 948, 1410
Eco91I GGTNACC 1 cut(s) 1852
EcoO65I GGTNACC 1 cut(s) 1852
EcoRV GATATC 1 cut(s) 1037
EcoT14I CCWWGG 1 cut(s) 1187
EcoT22I ATGCAT 1 cut(s) 1621
EgeI GGCGCC 1 cut(s) 658
EheI GGCGCC 1 cut(s) 658
ErhI CCWWGG 1 cut(s) 1187
FalI AAGNNNNNCTT 4 cut(s) 962, 994, 1239, 1271
FaqI GGGAC 2 cut(s) 1429, 1850
FbaI TGATCA 1 cut(s) 627
Fnu4HI GCNGC 4 cut(s) 297, 528, 618, 909
FokI GGATG 5 cut(s) 493, 701, 1337, 1487, 1581
Fsp4HI GCNGC 4 cut(s) 297, 528, 618, 909
FspBI CTAG 5 cut(s) 344, 399, 743, 992, 1830
FspI TGCGCA 1 cut(s) 710
GlaI GCGC 2 cut(s) 658, 710
GluI GCNGC 4 cut(s) 297, 528, 618, 909
GsuI CTGGAG 5 cut(s) 299, 606, 873, 1258, 1523
HaeII RGCGCY 1 cut(s) 660
HaeIII GGCC 2 cut(s) 960, 1455
HapII CCGG 1 cut(s) 881
HgaI GACGC 1 cut(s) 1852
HhaI GCGC 2 cut(s) 659, 711
Hin1I GRCGYC 1 cut(s) 657
Hin6I GCGC 2 cut(s) 657, 709
HinP1I GCGC 2 cut(s) 657, 709
HindIII AAGCTT 3 cut(s) 332, 449, 1650
HinfI GANTC 3 cut(s) 132, 425, 988
HpaII CCGG 1 cut(s) 881
HphI GGTGA 2 cut(s) 1425, 1621
Hpy166II GTNNAC 2 cut(s) 1217, 1729
Hpy188I TCNGA 5 cut(s) 459, 928, 1351, 1386, 1465
Hpy8I GTNNAC 2 cut(s) 1217, 1729
HpyAV CCTTC 6 cut(s) 148, 393, 1229, 1512, 1586, 1865
HpyCH4III ACNGT 5 cut(s) 466, 575, 772, 1014, 1424
HpyCH4V TGCA 7 cut(s) 156, 479, 483, 740, 1445, 1619, 1778
HpyF10VI GCNNNNNNNGC 3 cut(s) 524, 717, 1745
HpyF3I CTNAG 5 cut(s) 116, 128, 748, 1437, 1464
Hsp92I GRCGYC 1 cut(s) 657
HspAI GCGC 2 cut(s) 657, 709
KasI GGCGCC 1 cut(s) 656
Ksp22I TGATCA 1 cut(s) 627
Kzo9I GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
LguI GCTCTTC 1 cut(s) 1819
LmnI GCTCC 1 cut(s) 1080
Lsp1109I GCAGC 3 cut(s) 308, 604, 895
LweI GCATC 4 cut(s) 505, 984, 1606, 1628
MaeI CTAG 5 cut(s) 344, 399, 743, 992, 1830
MaeIII GTNAC 6 cut(s) 394, 569, 733, 1424, 1431, 1852
MalI GATC 8 cut(s) 114, 206, 501, 629, 1185, 1299, 1695, 1704
MbiI CCGCTC 1 cut(s) 728
MboI GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
MboII GAAGA 8 cut(s) 420, 808, 874, 1136, 1703, 1710, 1806, 1809
MflI RGATCY 3 cut(s) 204, 1297, 1693
MhlI GDGCHC 1 cut(s) 418
MlsI TGGCCA 1 cut(s) 1455
MluNI TGGCCA 1 cut(s) 1455
Mly113I GGCGCC 1 cut(s) 657
MlyI GAGTC 2 cut(s) 126, 434
MmeI TCCRAC 4 cut(s) 304, 1102, 1185, 1302
Mox20I TGGCCA 1 cut(s) 1455
Mph1103I ATGCAT 1 cut(s) 1621
MscI TGGCCA 1 cut(s) 1455
MseI TTAA 9 cut(s) 453, 537, 554, 887, 893, 980, 1058, 1136, 1655
MslI CAYNNNNRTG 1 cut(s) 1678
Msp20I TGGCCA 1 cut(s) 1455
MspCI CTTAAG 1 cut(s) 886
MspI CCGG 1 cut(s) 881
MwoI GCNNNNNNNGC 3 cut(s) 524, 717, 1745
NarI GGCGCC 1 cut(s) 657
NdeII GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
NlaIV GGNNCC 1 cut(s) 658
NmuCI GTSAC 1 cut(s) 1431
NsbI TGCGCA 1 cut(s) 710
NsiI ATGCAT 1 cut(s) 1621
NspI RCATGY 6 cut(s) 105, 483, 1153, 1432, 1638, 1735
PaeI GCATGC 1 cut(s) 483
PagI TCATGA 2 cut(s) 1047, 1645
PciI ACATGT 3 cut(s) 1428, 1634, 1731
PciSI GCTCTTC 1 cut(s) 1819
PfeI GAWTC 1 cut(s) 988
PinAI ACCGGT 1 cut(s) 880
PkrI GCNGC 4 cut(s) 298, 529, 619, 910
PleI GAGTC 2 cut(s) 126, 433
PluTI GGCGCC 1 cut(s) 660
PpsI GAGTC 2 cut(s) 126, 433
PscI ACATGT 3 cut(s) 1428, 1634, 1731
PshBI ATTAAT 2 cut(s) 554, 1136
PsiI TTATAA 2 cut(s) 969, 1800
PspEI GGTNACC 1 cut(s) 1852
PspN4I GGNNCC 1 cut(s) 658
PspPI GGNCC 2 cut(s) 641, 959
PsuI RGATCY 3 cut(s) 204, 1297, 1693
RsaI GTAC 4 cut(s) 468, 599, 1148, 1254
RsaNI GTAC 4 cut(s) 467, 598, 1147, 1253
RseI CAYNNNNRTG 1 cut(s) 1678
SapI GCTCTTC 1 cut(s) 1819
SaqAI TTAA 9 cut(s) 453, 537, 554, 887, 893, 980, 1058, 1136, 1655
SatI GCNGC 4 cut(s) 297, 528, 618, 909
Sau3AI GATC 8 cut(s) 112, 204, 499, 627, 1183, 1297, 1693, 1702
Sau96I GGNCC 2 cut(s) 641, 959
ScaI AGTACT 1 cut(s) 1254
SchI GAGTC 2 cut(s) 126, 434
SduI GDGCHC 1 cut(s) 418
SfaNI GCATC 4 cut(s) 505, 984, 1606, 1628
SfcI CTRYAG 1 cut(s) 1722
SfoI GGCGCC 1 cut(s) 658
SinI GGWCC 1 cut(s) 641
SmiMI CAYNNNNRTG 1 cut(s) 1678
SmlI CTYRAG 2 cut(s) 886, 1245
SmoI CTYRAG 2 cut(s) 886, 1245
SpeI ACTAGT 1 cut(s) 742
SphI GCATGC 1 cut(s) 483
SsiI CCGC 2 cut(s) 527, 726
SspDI GGCGCC 1 cut(s) 656
SspI AATATT 1 cut(s) 835
SspMI CTAG 5 cut(s) 344, 399, 743, 992, 1830
StyI CCWWGG 1 cut(s) 1187
TaaI ACNGT 5 cut(s) 466, 575, 772, 1014, 1424
TaqI TCGA 5 cut(s) 1159, 1374, 1705, 1841, 1876
TatI WGTACW 3 cut(s) 466, 1146, 1252
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 1 cut(s) 988
Tru1I TTAA 9 cut(s) 453, 537, 554, 887, 893, 980, 1058, 1136, 1655
Tru9I TTAA 9 cut(s) 453, 537, 554, 887, 893, 980, 1058, 1136, 1655
TscAI CASTG 4 cut(s) 253, 469, 502, 1629
TseFI GTSAC 1 cut(s) 1431
TseI GCWGC 3 cut(s) 296, 617, 908
Tsp45I GTSAC 1 cut(s) 1431
TspDTI ATGAA 8 cut(s) 29, 1036, 1064, 1214, 1341, 1349, 1662, 1758
TspRI CASTG 4 cut(s) 253, 469, 502, 1629
Vha464I CTTAAG 1 cut(s) 886
VpaK11BI GGWCC 1 cut(s) 641
VspI ATTAAT 2 cut(s) 554, 1136
XapI RAATTY 5 cut(s) 304, 540, 1172, 1344, 1525
XbaI TCTAGA 1 cut(s) 991
XceI RCATGY 6 cut(s) 105, 483, 1153, 1432, 1638, 1735
XspI CTAG 5 cut(s) 344, 399, 743, 992, 1830
ZrmI AGTACT 1 cut(s) 1254
Zsp2I ATGCAT 1 cut(s) 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.