FvH4_2g19200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
16360312 .. 16363050
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g19200.t1

Sequence Viewer

Length: 1341 bp
ATGAGTTGTTTTTCGTGCTTTTCATCTAAAACTGCTGCCAAAAGATCAAATAGTGGGAAGAGAGAAGAATTGTTGTCTCTTTCCGACAGGGAACCGATTAATAATGTAGCACCTGCTGAAGTGCCTAAGGCCAATCCCCATTCCCTGCCTAATGAGCAAACCACAAACAATAGGAATGCTAATGCAAATGCCAGTAAAGATGGTGGTCATAATATTGCTGCACAAACTTTCACCTTCCGTGAACTGGCAACAGCAACAAAGAACTTCCGACAACAATGTCTGATCGGAGAGGGTGGATTTGGAAGAGTTTATAAGGGGAAGCTTGAAACAACAGACCAGATTGTAGCTGTGAAGCAACTTGATAGGAATGGCTTGCAAGGAAATAGAGAGTTCCTTGTTGAGGTGTTGATGTTGAGTCTCTTACACCATGACAATTTAGTGAATCTTATCGGATATTGCGCTGATGGTGATCAGAGACTTCTGGTGTATGAGTTCATGCGTTTGGGATCTTTGGAAGATCATTTATTAGACGTCCCACCAGGGCAAAAGCCATTAGATTGGACCAAGAGAATGAGGATAGCTCTAGGAGCTGCCAAGGGTCTAGAATACTTGCATGATAAGGCAAATCCTCCAGTTATTTACCGAGATTTAAAATCTTCAAACATCTTATTAGACTCCGATTTCAATGCAAAACTCTCTGATTTCGGGCTAGCTAAGCTTGGACCGGTTGGAGACAAGACACATGTATCTTCAAGAGTAATGGGAACATACGGGTATTGTGCCCCTGAGTACCAAAGAACAGGCCAACTGACTGTTAAGTCGGATGTGTACAGTTTTGGAGTTGTGTTGTTAGAACTGATCACCGGAAGGAGAGCAATCGACACAACAAGGCCAACAAGGGAGCAAAATCTTGTGTCTTGGGCAGAGCCAGTGTTCAAGGATCCTCATAAGTATCCGGGACTAGCTGATCCACTTCTTGTAGGAGACTATCCAGTAAGAGCATTGAATCAAGCAGTTGCAGTTGCAGCAATGTGTCTTCATGAGGAAGCGCCAGCGCGTCCCTTAATGAGTGATGTGGTCAGTGCTCTCAGTTTCCTTGGGGTTGATGATGAAGAAAGTATTCCCTCCTCACCCTCACAAGCCGATGATGAAGGTGATGATGATGATAATCATGATAATGATGATGAAGACATGTCTGACGTAGAATACAGGAATTCAAAGGAAGAAGAAAGTGTAAAGGAACGCAAACGCGCTGTAGCAGAAGCCATAGAATGGGGTTCAACTTCAAGGACCAATGCAGCCTCCTCAAAGTTGGAAACTGCTTCTTCATTGCAAAAGTGA

Protein Analysis

447

Amino Acids

49.12

Weight (kDa)

5.23

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 92 - 298 7.1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 92 - 300 9.7e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 312
AarI CACCTGC 1 cut(s) 121
AasI GACNNNNNNGTC 2 cut(s) 276, 817
AatII GACGTC 1 cut(s) 534
Acc36I ACCTGC 1 cut(s) 121
AccB7I CCANNNNNTGG 1 cut(s) 1272
AccII CGCG 2 cut(s) 1057, 1251
AclWI GGATC 4 cut(s) 514, 935, 948, 962
AcsI RAATTY 1 cut(s) 1213
AcuI CTGAAG 1 cut(s) 138
AcyI GRCGYC 1 cut(s) 531
AfaI GTAC 2 cut(s) 791, 830
AfiI CCNNNNNNNGG 3 cut(s) 244, 400, 1272
AflIII ACRYGT 2 cut(s) 742, 1191
AgeI ACCGGT 1 cut(s) 724
AgsI TTSAA 9 cut(s) 326, 660, 685, 753, 937, 1006, 1218, 1281, 1287
AjnI CCWGG 1 cut(s) 538
AluBI AGCT 7 cut(s) 322, 347, 581, 590, 713, 718, 965
AluI AGCT 7 cut(s) 322, 347, 581, 590, 713, 718, 965
Alw21I GWGCWC 1 cut(s) 1087
Alw26I GTCTC 5 cut(s) 81, 422, 469, 726, 978
AlwI GGATC 4 cut(s) 514, 935, 948, 962
AoxI GGCC 3 cut(s) 129, 802, 890
ApeKI GCWGC 5 cut(s) 35, 218, 590, 1025, 1298
ApoI RAATTY 1 cut(s) 1213
AseI ATTAAT 1 cut(s) 99
AsiGI ACCGGT 1 cut(s) 724
Asp700I GAANNNNTTC 1 cut(s) 1119
AspLEI GCGC 4 cut(s) 461, 1051, 1057, 1253
AspS9I GGNCC 3 cut(s) 561, 722, 1290
AsuC2I CCSGG 1 cut(s) 957
AsuHPI GGTGA 5 cut(s) 223, 479, 853, 1122, 1166
AsuNHI GCTAGC 1 cut(s) 709
AvaII GGWCC 3 cut(s) 561, 722, 1290
AxyI CCTNAGG 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 784
BaeI ACNNNNGTAYC 2 cut(s) 729, 762
BamHI GGATCC 1 cut(s) 940
BbsI GAAGAC 2 cut(s) 1028, 1194
Bbv12I GWGCWC 1 cut(s) 1087
BbvI GCAGC 5 cut(s) 22, 205, 577, 1037, 1310
BccI CCATC 2 cut(s) 194, 458
BcgI CGANNNNNNTGC 2 cut(s) 668, 702
BciT130I CCWGG 1 cut(s) 540
BciVI GTATCC 1 cut(s) 963
BclI TGATCA 2 cut(s) 469, 858
BcnI CCSGG 1 cut(s) 957
BcoDI GTCTC 5 cut(s) 81, 422, 469, 726, 978
BfaI CTAG 4 cut(s) 584, 602, 710, 962
BfmI CTRYAG 1 cut(s) 1254
BfoI RGCGCY 1 cut(s) 1052
BfuAI ACCTGC 1 cut(s) 121
BfuI GTATCC 1 cut(s) 963
BisI GCNGC 5 cut(s) 36, 219, 591, 1026, 1299
BlpI GCTNAGC 1 cut(s) 714
BlsI GCNGC 5 cut(s) 37, 220, 592, 1027, 1300
Bme1390I CCNGG 2 cut(s) 540, 957
Bme18I GGWCC 3 cut(s) 561, 722, 1290
BmgT120I GGNCC 3 cut(s) 561, 722, 1290
BmiI GGNNCC 2 cut(s) 93, 942
BmrFI CCNGG 2 cut(s) 540, 957
BmtI GCTAGC 1 cut(s) 713
BpiI GAAGAC 2 cut(s) 1028, 1194
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 1 cut(s) 615
Bpu1102I GCTNAGC 1 cut(s) 714
BpuMI CCSGG 1 cut(s) 957
BsaBI GATNNNNATC 2 cut(s) 468, 1167
BsaHI GRCGYC 1 cut(s) 531
BsaJI CCNNGG 3 cut(s) 539, 594, 1096
BsaWI WCCGGW 2 cut(s) 724, 863
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 400, 1272
Bse118I RCCGGY 1 cut(s) 724
Bse1I ACTGG 5 cut(s) 192, 249, 632, 929, 992
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 2 cut(s) 1035, 1328
Bse8I GATNNNNATC 2 cut(s) 468, 1167
BseBI CCWGG 1 cut(s) 540
BseDI CCNNGG 3 cut(s) 539, 594, 1096
BseGI GGATG 1 cut(s) 829
BseJI GATNNNNATC 2 cut(s) 468, 1167
BseLI CCNNNNNNNGG 3 cut(s) 244, 400, 1272
BseMI GCAATG 2 cut(s) 1035, 1328
BseMII CTCAG 2 cut(s) 777, 1102
BseNI ACTGG 5 cut(s) 192, 249, 632, 929, 992
BseRI GAGGAG 2 cut(s) 1117, 1294
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 5 cut(s) 22, 205, 577, 1037, 1310
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 2 cut(s) 1057, 1251
BshFI GGCC 3 cut(s) 131, 804, 892
BshTI ACCGGT 1 cut(s) 724
BsiHKAI GWGCWC 1 cut(s) 1087
BsiSI CCGG 3 cut(s) 725, 864, 956
BslFI GGGAC 3 cut(s) 518, 972, 1044
BslI CCNNNNNNNGG 3 cut(s) 244, 400, 1272
BsmAI GTCTC 5 cut(s) 81, 422, 469, 726, 978
BsmFI GGGAC 3 cut(s) 518, 972, 1044
BsmI GAATGC 1 cut(s) 181
BsnI GGCC 3 cut(s) 131, 804, 892
Bsp1286I GDGCHC 2 cut(s) 784, 1087
Bsp1407I TGTACA 1 cut(s) 828
Bsp143I GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
Bsp1720I GCTNAGC 1 cut(s) 714
BspANI GGCC 3 cut(s) 131, 804, 892
BspCNI CTCAG 2 cut(s) 778, 1101
BspFNI CGCG 2 cut(s) 1057, 1251
BspHI TCATGA 2 cut(s) 1039, 1171
BspLI GGNNCC 2 cut(s) 93, 942
BspMI ACCTGC 1 cut(s) 121
BspOI GCTAGC 1 cut(s) 713
BspPI GGATC 4 cut(s) 514, 935, 948, 962
BsrDI GCAATG 2 cut(s) 1035, 1328
BsrFI RCCGGY 1 cut(s) 724
BsrGI TGTACA 1 cut(s) 828
BsrI ACTGG 5 cut(s) 192, 249, 632, 929, 992
BssAI RCCGGY 1 cut(s) 724
BssECI CCNNGG 3 cut(s) 539, 594, 1096
BssMI GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
BssNI GRCGYC 1 cut(s) 531
BssT1I CCWWGG 2 cut(s) 594, 1096
Bst2UI CCWGG 1 cut(s) 540
Bst4CI ACNGT 2 cut(s) 814, 833
Bst6I CTCTTC 2 cut(s) 53, 298
BstACI GRCGYC 1 cut(s) 531
BstAUI TGTACA 1 cut(s) 828
BstC8I GCNNGC 3 cut(s) 374, 711, 1053
BstDEI CTNAG 4 cut(s) 126, 714, 786, 1088
BstENI CCTNNNNNAGG 1 cut(s) 398
BstF5I GGATG 1 cut(s) 829
BstFNI CGCG 2 cut(s) 1057, 1251
BstH2I RGCGCY 1 cut(s) 1052
BstHHI GCGC 4 cut(s) 461, 1051, 1057, 1253
BstKTI GATC 8 cut(s) 47, 285, 472, 509, 520, 861, 943, 970
BstMAI GTCTC 5 cut(s) 81, 422, 469, 726, 978
BstMBI GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
BstMWI GCNNNNNNNGC 4 cut(s) 154, 587, 715, 1025
BstNI CCWGG 1 cut(s) 540
BstNSI RCATGY 2 cut(s) 746, 1195
BstSCI CCNGG 2 cut(s) 538, 955
BstSFI CTRYAG 1 cut(s) 1254
BstSLI GKGCMC 1 cut(s) 784
BstUI CGCG 2 cut(s) 1057, 1251
BstV1I GCAGC 5 cut(s) 22, 205, 577, 1037, 1310
BstV2I GAAGAC 2 cut(s) 1028, 1194
BstX2I RGATCY 2 cut(s) 506, 940
BstXI CCANNNNNNTGG 1 cut(s) 558
BstYI RGATCY 2 cut(s) 506, 940
Bsu36I CCTNAGG 1 cut(s) 126
BsuI GTATCC 1 cut(s) 963
BsuRI GGCC 3 cut(s) 131, 804, 892
BtsCI GGATG 1 cut(s) 829
BtsIMutI CAGTG 2 cut(s) 936, 1087
BveI ACCTGC 1 cut(s) 121
Cac8I GCNNGC 3 cut(s) 374, 711, 1053
CciI TCATGA 2 cut(s) 1039, 1171
CfoI GCGC 4 cut(s) 461, 1051, 1057, 1253
Cfr10I RCCGGY 1 cut(s) 724
Cfr13I GGNCC 3 cut(s) 561, 722, 1290
CseI GACGC 1 cut(s) 1046
Csp6I GTAC 2 cut(s) 790, 829
CspAI ACCGGT 1 cut(s) 724
CviAII CATG 7 cut(s) 428, 496, 614, 743, 1040, 1172, 1192
CviQI GTAC 2 cut(s) 790, 829
DdeI CTNAG 4 cut(s) 126, 714, 786, 1088
DpnI GATC 8 cut(s) 46, 284, 471, 508, 519, 860, 942, 969
DpnII GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
DraI TTTAAA 1 cut(s) 651
DrdI GACNNNNNNGTC 2 cut(s) 276, 817
DseDI GACNNNNNNGTC 2 cut(s) 276, 817
Eam1104I CTCTTC 2 cut(s) 53, 298
EarI CTCTTC 2 cut(s) 53, 298
Eco130I CCWWGG 2 cut(s) 594, 1096
Eco47I GGWCC 3 cut(s) 561, 722, 1290
Eco57I CTGAAG 1 cut(s) 138
Eco81I CCTNAGG 1 cut(s) 126
EcoNI CCTNNNNNAGG 1 cut(s) 398
EcoRI GAATTC 1 cut(s) 1213
EcoRII CCWGG 1 cut(s) 538
EcoT14I CCWWGG 2 cut(s) 594, 1096
ErhI CCWWGG 2 cut(s) 594, 1096
FaeI CATG 7 cut(s) 431, 499, 617, 746, 1043, 1175, 1195
FaqI GGGAC 3 cut(s) 518, 972, 1044
FatI CATG 7 cut(s) 427, 495, 613, 742, 1039, 1171, 1191
FbaI TGATCA 2 cut(s) 469, 858
Fnu4HI GCNGC 5 cut(s) 36, 219, 591, 1026, 1299
FokI GGATG 1 cut(s) 836
Fsp4HI GCNGC 5 cut(s) 36, 219, 591, 1026, 1299
FspBI CTAG 4 cut(s) 584, 602, 710, 962
GlaI GCGC 4 cut(s) 460, 1050, 1056, 1252
GluI GCNGC 5 cut(s) 36, 219, 591, 1026, 1299
GsuI CTGGAG 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 1052
HaeIII GGCC 3 cut(s) 131, 804, 892
HapII CCGG 3 cut(s) 725, 864, 956
HgaI GACGC 1 cut(s) 1046
HhaI GCGC 4 cut(s) 461, 1051, 1057, 1253
Hin1I GRCGYC 1 cut(s) 531
Hin1II CATG 7 cut(s) 431, 499, 617, 746, 1043, 1175, 1195
Hin6I GCGC 4 cut(s) 459, 1049, 1055, 1251
HinP1I GCGC 4 cut(s) 459, 1049, 1055, 1251
HindIII AAGCTT 2 cut(s) 320, 716
HinfI GANTC 4 cut(s) 415, 442, 674, 1006
HpaII CCGG 3 cut(s) 725, 864, 956
HphI GGTGA 5 cut(s) 223, 479, 853, 1122, 1166
Hpy166II GTNNAC 2 cut(s) 242, 829
Hpy188III TCNNGA 4 cut(s) 602, 753, 1040, 1172
Hpy8I GTNNAC 2 cut(s) 242, 829
HpyAV CCTTC 3 cut(s) 244, 861, 1145
HpyCH4III ACNGT 2 cut(s) 814, 833
HpyCH4IV ACGT 2 cut(s) 531, 1200
HpyCH4V TGCA 9 cut(s) 185, 221, 376, 613, 689, 1019, 1025, 1298, 1333
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 587, 715, 1025
HpyF3I CTNAG 4 cut(s) 126, 714, 786, 1088
HpySE526I ACGT 2 cut(s) 531, 1200
Hsp92I GRCGYC 1 cut(s) 531
Hsp92II CATG 7 cut(s) 431, 499, 617, 746, 1043, 1175, 1195
HspAI GCGC 4 cut(s) 459, 1049, 1055, 1251
Ksp22I TGATCA 2 cut(s) 469, 858
Kzo9I GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
LmnI GCTCC 2 cut(s) 587, 901
Lsp1109I GCAGC 5 cut(s) 22, 205, 577, 1037, 1310
MaeI CTAG 4 cut(s) 584, 602, 710, 962
MaeII ACGT 2 cut(s) 531, 1200
MalI GATC 8 cut(s) 46, 284, 471, 508, 519, 860, 942, 969
MboI GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
MflI RGATCY 2 cut(s) 506, 940
MhlI GDGCHC 2 cut(s) 784, 1087
MluCI AATT 3 cut(s) 68, 433, 1213
MlyI GAGTC 2 cut(s) 424, 668
MmeI TCCRAC 5 cut(s) 108, 292, 709, 801, 1293
MroXI GAANNNNTTC 1 cut(s) 1119
MseI TTAA 4 cut(s) 99, 650, 816, 1064
MslI CAYNNNNRTG 1 cut(s) 1176
MspI CCGG 3 cut(s) 725, 864, 956
MspR9I CCNGG 2 cut(s) 540, 957
Mva1269I GAATGC 1 cut(s) 181
MvaI CCWGG 1 cut(s) 540
MvnI CGCG 2 cut(s) 1057, 1251
MwoI GCNNNNNNNGC 4 cut(s) 154, 587, 715, 1025
NciI CCSGG 1 cut(s) 957
NdeII GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
NheI GCTAGC 1 cut(s) 709
NlaIII CATG 7 cut(s) 431, 499, 617, 746, 1043, 1175, 1195
NlaIV GGNNCC 2 cut(s) 93, 942
NspI RCATGY 2 cut(s) 746, 1195
PagI TCATGA 2 cut(s) 1039, 1171
PaqCI CACCTGC 1 cut(s) 121
PciI ACATGT 2 cut(s) 742, 1191
PctI GAATGC 1 cut(s) 181
PdmI GAANNNNTTC 1 cut(s) 1119
PfeI GAWTC 2 cut(s) 442, 1006
PflMI CCANNNNNTGG 1 cut(s) 1272
PfoI TCCNGGA 1 cut(s) 955
PinAI ACCGGT 1 cut(s) 724
PkrI GCNGC 5 cut(s) 37, 220, 592, 1027, 1300
PleI GAGTC 2 cut(s) 423, 668
PpsI GAGTC 2 cut(s) 423, 668
PscI ACATGT 2 cut(s) 742, 1191
PshBI ATTAAT 1 cut(s) 99
PsiI TTATAA 1 cut(s) 312
Psp6I CCWGG 1 cut(s) 538
PspGI CCWGG 1 cut(s) 538
PspN4I GGNNCC 2 cut(s) 93, 942
PspPI GGNCC 3 cut(s) 561, 722, 1290
PsuI RGATCY 2 cut(s) 506, 940
RsaI GTAC 2 cut(s) 791, 830
RsaNI GTAC 2 cut(s) 790, 829
RseI CAYNNNNRTG 1 cut(s) 1176
SaqAI TTAA 4 cut(s) 99, 650, 816, 1064
SatI GCNGC 5 cut(s) 36, 219, 591, 1026, 1299
Sau3AI GATC 8 cut(s) 44, 282, 469, 506, 517, 858, 940, 967
Sau96I GGNCC 3 cut(s) 561, 722, 1290
SchI GAGTC 2 cut(s) 424, 668
ScrFI CCNGG 2 cut(s) 540, 957
SduI GDGCHC 2 cut(s) 784, 1087
SfcI CTRYAG 1 cut(s) 1254
SinI GGWCC 3 cut(s) 561, 722, 1290
SmiMI CAYNNNNRTG 1 cut(s) 1176
Sse9I AATT 3 cut(s) 68, 433, 1213
SspI AATATT 1 cut(s) 214
SspMI CTAG 4 cut(s) 584, 602, 710, 962
StyD4I CCNGG 2 cut(s) 538, 955
StyI CCWWGG 2 cut(s) 594, 1096
TaaI ACNGT 2 cut(s) 814, 833
TaiI ACGT 2 cut(s) 534, 1203
TaqI TCGA 1 cut(s) 879
TasI AATT 3 cut(s) 68, 433, 1213
TatI WGTACW 1 cut(s) 828
TfiI GAWTC 2 cut(s) 442, 1006
Tru1I TTAA 4 cut(s) 99, 650, 816, 1064
Tru9I TTAA 4 cut(s) 99, 650, 816, 1064
TscAI CASTG 2 cut(s) 936, 1087
TseI GCWGC 5 cut(s) 35, 218, 590, 1025, 1298
TspDTI ATGAA 7 cut(s) 12, 484, 1028, 1125, 1164, 1200, 1317
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 2 cut(s) 936, 1087
Van91I CCANNNNNTGG 1 cut(s) 1272
VpaK11BI GGWCC 3 cut(s) 561, 722, 1290
VspI ATTAAT 1 cut(s) 99
XagI CCTNNNNNAGG 1 cut(s) 398
XapI RAATTY 1 cut(s) 1213
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 2 cut(s) 746, 1195
XmnI GAANNNNTTC 1 cut(s) 1119
XspI CTAG 4 cut(s) 584, 602, 710, 962
ZraI GACGTC 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.