Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003079

Physical Location & Seq

Genomic Coordinates Reverse (-)

31514334 .. 31517277

Gene Structure 2944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1236200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGAGTTGTTTTCCGTGTTTCGGCTCGCAGAGAAGTAAGAGATCAAATAGCAACAAGAGATTAGAGAATGACTCGTCTTCTCCTCCTGTCGCGCAAGAATTGAAGAAACAAAAACCTGCAGAGGCCACCGAGGCAGTTAACCCAGCAGATATTAATGCAAAGGCTTTCACTTTCCGGGAGCTTGCGACAGCAACAAAGAATTTCCGGCAGGAATTTCTTTTGGGGGAAGGTGGATTTGGAAGAGTCTATAAGGGAACTCTTCAGTCGAGCGGGCAGGTGGTGGCGGTGAAGCAACTGGACAGACATGGAATGCATGGGAACAAAGAGTTTCTTGGGGATGTTTTGATGCTAAGCCTCCTACACCATCCAAATCTGGTTAACCTAATTGGATATTGTGCTGATGGAGATCAAAGACTTTTGGTGTATGAATTCATATCCGGGGGTTCTGTAGACGATCGTGTTCTTGGCAATGGACCAGATGACAAGCCATTAGATTGGTACACCCGAGTTAAAATAGCTTATGGTGCTGCTATGGGACTGGAGTACTTGCACGAAAAGGCCAATCCCCCAGTTGTCTATCGAGATTTGAAATCTTCAAACATCTTGCTAGACGAAGCATTCAATCCAAAGCTCTCAGATGTTGGACTTGCCCAGCTTGGCTCCGAGGGAGATAAGAGTCATGGACCATCAAGACTGATGGGAACCTATGGTTTCTGTGCTCCTGAGTATTCAAGATCGGGTGAATTCACAATGAAGTCGGATGTGTACAGTTTCGGAGTTATACTTCTGGAGCTCATTACCGGAAGAAGAGCCATTGACACAACAAGGTCAAATGATGAGCAAAATCTAGTATCTTGGGCACAACCCTTATTCAGGGACCCGAAAAAGTATCCTGACATGGCAGATCCTCTTCTTAACAAGCAATTCCCAGAAAAGGATCTAAATCAAGCTGTTGCAATAGCATCCATGTGTTTGCAAGAGGAGGCAGAAGTTCGTCCCTTCATGAGTGACGTTGTGAATACTCTAAGTTTTCTTTCCACAACTCCTCCTCCTCCTGAGGCTGTCCCTGCTCCTCTTCCAGCTGATCTGACCCCAACTGAAAAACGTGAAGAGAACAATGACGAATCAGAATGTGTTTCTGAATATTCAGAAGACGATGATCTTGATGATGCAGGAGATGATGACGAAGATCAGGAGGCTTCTGATCAAGAGAGTATCAGAAATTCAAGGAGCAACCGCCGTAGCGTTGAAATTTCAGAAGGTGAAGGTAGCAAAAATGAACGCCAAGTAACTCTTACAGAATCCAAAGAATGGCATTCATTTACAAGGGGCAGCATGATATCACGGAACGACAGTGTTAATTCAAGTGACCAGGGCAGCAAGGGTGGTAATAATTTGGATGGTAATTCAAGCCAAGTTAGCAGCAATCAATCCAAATATGCAAGTGCATCTTCTAGAAGCAGTAGCAGTGGGTCAACAGAAGAAATCGTTTCCAATAGCAGAAAGAACAGCAGAAAAGCATCACAAAAAGAAACTGCTACTGTTACATTAGCTGGCAATAGCAGTACCGAGGAAAAATCATCAGAAGGCGGAAGTGTTTGCACAAATGATCAGGATCAGAAAAGCATAAGCAAGGTACAACAACTACCACCAATACTGAAAGATGGAAAAGTTTCTGTAGACCAACACAGAAACAACGAGGAATCGCATGATTTTAAATCATCGAAAAAATGTCAATCCAGTCGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0038023 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051286 GO:0051704 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

584

Amino Acids

64.05

Weight (kDa)

5.06

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	71 - 340	3.8e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	73 - 341	9.5e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07070 AT3G24790 AT3G24790 AT4G13190 AT4G13190 AT4G13190 AT4G13190 AT4G13190
fragaria_vesca	FvH4_2g19200 FvH4_6g01120
malus_domestica	MD04G1236200.v1.1 MD05G1176700.v1.1 MD10G1165400.v1.1 MD12G1255300.v1.1
prunus_persica	Prupe.6G356200_v2.0.a1 Prupe.8G203800_v2.0.a1
pyrus_communis	pycom05g16290 pycom12g23400
rosa_chinensis	RchiOBHm_Chr3g0448651 RchiOBHm_Chr6g0284981
rosa_laevigata	RLG00000012693 RLG00000025882
rosa_multiflora	Rmu_sc0003116.1_g000035
rosa_roxburghii	Rroxscaffold_6G00426920 Rroxscaffold_7G00183870 Rroxscaffold_7G00184150
rosa_rugosa	Rorug02G0615000
rosa_samantha	Rh3AG013800 Rh3BG013600 Rh3CG012700 Rh3DG014400 Rh6AG281200 Rh6BG281900 Rh6CG283600 Rh6DG276700
rosa_wichuraiana	Rw3G001020 Rw6G024170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	265
Acc36I	ACCTGC	2 cut(s)	124, 265
AccB7I	CCANNNNNTGG	1 cut(s)	1311
AccBSI	CCGCTC	1 cut(s)	270
AccI	GTMKAC	2 cut(s)	450, 1680
AccII	CGCG	1 cut(s)	92
AciI	CCGC	4 cut(s)	270, 284, 1237, 1590
AclWI	GGATC	3 cut(s)	899, 945, 1623
AcsI	RAATTY	6 cut(s)	199, 212, 428, 743, 1222, 1251
AcuI	CTGAAG	1 cut(s)	245
AfaI	GTAC	5 cut(s)	500, 545, 767, 1567, 1638
AfiI	CCNNNNNNNGG	4 cut(s)	20, 873, 934, 1311
AgsI	TTSAA	9 cut(s)	103, 589, 597, 622, 732, 1227, 1250, 1365, 1410
AjnI	CCWGG	1 cut(s)	1371
AjuI	GAANNNNNNNTTGG	2 cut(s)	219, 251
AluBI	AGCT	8 cut(s)	181, 518, 631, 655, 793, 950, 1082, 1553
AluI	AGCT	8 cut(s)	181, 518, 631, 655, 793, 950, 1082, 1553
Alw21I	GWGCWC	2 cut(s)	721, 795
AlwI	GGATC	3 cut(s)	899, 945, 1623
Ama87I	CYCGRG	1 cut(s)	504
AoxI	GGCC	2 cut(s)	123, 558
ApeKI	GCWGC	4 cut(s)	527, 1332, 1377, 1422
ApoI	RAATTY	6 cut(s)	199, 212, 428, 743, 1222, 1251
AseI	ATTAAT	1 cut(s)	153
Asp700I	GAANNNNTTC	1 cut(s)	1672
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	3 cut(s)	473, 683, 877
AsuC2I	CCSGG	2 cut(s)	176, 439
AsuHPI	GGTGA	3 cut(s)	298, 752, 1274
AvaI	CYCGRG	1 cut(s)	504
AvaII	GGWCC	3 cut(s)	473, 683, 877
AxyI	CCTNAGG	1 cut(s)	1056
BaeGI	GKGCMC	1 cut(s)	862
BanII	GRGCYC	1 cut(s)	795
BbsI	GAAGAC	2 cut(s)	69, 1158
Bbv12I	GWGCWC	2 cut(s)	721, 795
BbvI	GCAGC	4 cut(s)	514, 1344, 1389, 1434
BccI	CCATC	6 cut(s)	372, 395, 691, 694, 1394, 1658
BceAI	ACGGC	1 cut(s)	1224
BciT130I	CCWGG	1 cut(s)	1373
BciVI	GTATCC	1 cut(s)	900
BclI	TGATCA	2 cut(s)	1204, 1609
BcnI	CCSGG	2 cut(s)	176, 439
BfaI	CTAG	3 cut(s)	608, 848, 1455
BfmI	CTRYAG	3 cut(s)	117, 447, 1677
BfuAI	ACCTGC	2 cut(s)	124, 265
BfuI	GTATCC	1 cut(s)	900
BglI	GCCNNNNNGGC	1 cut(s)	131
BisI	GCNGC	4 cut(s)	528, 1333, 1378, 1423
BlpI	GCTNAGC	1 cut(s)	350
BlsI	GCNGC	4 cut(s)	529, 1334, 1379, 1424
BmcAI	AGTACT	1 cut(s)	545
Bme1390I	CCNGG	3 cut(s)	176, 439, 1373
Bme18I	GGWCC	3 cut(s)	473, 683, 877
BmeT110I	CYCGRG	1 cut(s)	504
BmgT120I	GGNCC	3 cut(s)	473, 683, 877
BmiI	GGNNCC	4 cut(s)	661, 703, 878, 879
BmrFI	CCNGG	3 cut(s)	176, 439, 1373
BmrI	ACTGGG	1 cut(s)	563
BmsI	GCATC	5 cut(s)	336, 971, 1159, 1457, 1529
BmuI	ACTGGG	1 cut(s)	563
BpiI	GAAGAC	2 cut(s)	69, 1158
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	2 cut(s)	560, 809
Bpu1102I	GCTNAGC	1 cut(s)	350
BpuMI	CCSGG	2 cut(s)	176, 439
BsaBI	GATNNNNATC	3 cut(s)	405, 942, 1614
BsaJI	CCNNGG	5 cut(s)	129, 438, 663, 1372, 1569
BsaWI	WCCGGW	1 cut(s)	800
BsaXI	ACNNNNNCTCC	4 cut(s)	1030, 1033, 1060, 1063
Bsc4I	CCNNNNNNNGG	4 cut(s)	20, 873, 934, 1311
Bse1I	ACTGG	4 cut(s)	300, 543, 569, 1740
Bse21I	CCTNAGG	1 cut(s)	1056
Bse3DI	GCAATG	1 cut(s)	475
Bse8I	GATNNNNATC	3 cut(s)	405, 942, 1614
BseBI	CCWGG	1 cut(s)	1373
BseDI	CCNNGG	5 cut(s)	129, 438, 663, 1372, 1569
BseGI	GGATG	5 cut(s)	343, 364, 766, 962, 1405
BseJI	GATNNNNATC	3 cut(s)	405, 942, 1614
BseLI	CCNNNNNNNGG	4 cut(s)	20, 873, 934, 1311
BseMI	GCAATG	1 cut(s)	475
BseMII	CTCAG	3 cut(s)	648, 714, 1047
BseNI	ACTGG	4 cut(s)	300, 543, 569, 1740
BseRI	GAGGAG	6 cut(s)	72, 995, 1035, 1038, 1041, 1062
BseSI	GKGCMC	1 cut(s)	862
BseXI	GCAGC	4 cut(s)	514, 1344, 1389, 1434
BseYI	CCCAGC	2 cut(s)	142, 651
Bsh1236I	CGCG	1 cut(s)	92
Bsh1285I	CGRYCG	1 cut(s)	457
BshFI	GGCC	2 cut(s)	125, 560
BsiEI	CGRYCG	1 cut(s)	457
BsiHKAI	GWGCWC	2 cut(s)	721, 795
BsiHKCI	CYCGRG	1 cut(s)	504
BsiSI	CCGG	4 cut(s)	175, 205, 438, 801
BslFI	GGGAC	4 cut(s)	549, 890, 981, 1049
BslI	CCNNNNNNNGG	4 cut(s)	20, 873, 934, 1311
BsmFI	GGGAC	4 cut(s)	549, 890, 981, 1049
BsmI	GAATGC	3 cut(s)	315, 617, 1315
BsnI	GGCC	2 cut(s)	125, 560
BsoBI	CYCGRG	1 cut(s)	504
Bsp1286I	GDGCHC	3 cut(s)	721, 795, 862
Bsp1407I	TGTACA	1 cut(s)	765
Bsp1720I	GCTNAGC	1 cut(s)	350
BspACI	CCGC	4 cut(s)	270, 284, 1237, 1590
BspANI	GGCC	2 cut(s)	125, 560
BspCNI	CTCAG	3 cut(s)	647, 715, 1048
BspFNI	CGCG	1 cut(s)	92
BspHI	TCATGA	1 cut(s)	1002
BspLI	GGNNCC	4 cut(s)	661, 703, 878, 879
BspMAI	CTGCAG	1 cut(s)	121
BspMI	ACCTGC	2 cut(s)	124, 265
BspPI	GGATC	3 cut(s)	899, 945, 1623
BspQI	GCTCTTC	1 cut(s)	802
BsrBI	CCGCTC	1 cut(s)	270
BsrDI	GCAATG	1 cut(s)	475
BsrGI	TGTACA	1 cut(s)	765
BsrI	ACTGG	4 cut(s)	300, 543, 569, 1740
BssECI	CCNNGG	5 cut(s)	129, 438, 663, 1372, 1569
Bst2UI	CCWGG	1 cut(s)	1373
Bst4CI	ACNGT	3 cut(s)	770, 1355, 1543
Bst6I	CTCTTC	6 cut(s)	235, 264, 802, 915, 1080, 1104
BstAUI	TGTACA	1 cut(s)	765
BstC8I	GCNNGC	4 cut(s)	26, 183, 272, 1555
BstDEI	CTNAG	5 cut(s)	350, 634, 723, 1025, 1056
BstENI	CCTNNNNNAGG	1 cut(s)	871
BstF5I	GGATG	5 cut(s)	343, 364, 766, 962, 1405
BstFNI	CGCG	1 cut(s)	92
BstHHI	GCGC	1 cut(s)	94
BstMCI	CGRYCG	1 cut(s)	457
BstMWI	GCNNNNNNNGC	4 cut(s)	131, 524, 1067, 1419
BstNI	CCWGG	1 cut(s)	1373
BstSCI	CCNGG	3 cut(s)	174, 437, 1371
BstSFI	CTRYAG	3 cut(s)	117, 447, 1677
BstSLI	GKGCMC	1 cut(s)	862
BstUI	CGCG	1 cut(s)	92
BstV1I	GCAGC	4 cut(s)	514, 1344, 1389, 1434
BstV2I	GAAGAC	2 cut(s)	69, 1158
BstX2I	RGATCY	2 cut(s)	904, 937
BstXI	CCANNNNNNTGG	1 cut(s)	495
BstYI	RGATCY	2 cut(s)	904, 937
Bsu36I	CCTNAGG	1 cut(s)	1056
BsuI	GTATCC	1 cut(s)	900
BsuRI	GGCC	2 cut(s)	125, 560
BtsCI	GGATG	5 cut(s)	343, 364, 766, 962, 1405
BtsI	GCAGTG	1 cut(s)	1474
BtsIMutI	CAGTG	2 cut(s)	1360, 1474
BveI	ACCTGC	2 cut(s)	124, 265
Cac8I	GCNNGC	4 cut(s)	26, 183, 272, 1555
CciI	TCATGA	1 cut(s)	1002
CfoI	GCGC	1 cut(s)	94
Cfr13I	GGNCC	3 cut(s)	473, 683, 877
Csp6I	GTAC	5 cut(s)	499, 544, 766, 1566, 1637
CviAII	CATG	8 cut(s)	305, 314, 680, 898, 967, 1003, 1336, 1709
CviQI	GTAC	5 cut(s)	499, 544, 766, 1566, 1637
DdeI	CTNAG	5 cut(s)	350, 634, 723, 1025, 1056
DraI	TTTAAA	1 cut(s)	1717
Eam1104I	CTCTTC	6 cut(s)	235, 264, 802, 915, 1080, 1104
EarI	CTCTTC	6 cut(s)	235, 264, 802, 915, 1080, 1104
EciI	GGCGGA	1 cut(s)	1605
Ecl136II	GAGCTC	1 cut(s)	793
Eco24I	GRGCYC	1 cut(s)	795
Eco32I	GATATC	1 cut(s)	1341
Eco47I	GGWCC	3 cut(s)	473, 683, 877
Eco53kI	GAGCTC	1 cut(s)	793
Eco57I	CTGAAG	1 cut(s)	245
Eco81I	CCTNAGG	1 cut(s)	1056
Eco88I	CYCGRG	1 cut(s)	504
EcoICRI	GAGCTC	1 cut(s)	793
EcoNI	CCTNNNNNAGG	1 cut(s)	871
EcoO109I	RGGNCCY	1 cut(s)	877
EcoRI	GAATTC	2 cut(s)	428, 743
EcoRII	CCWGG	1 cut(s)	1371
EcoRV	GATATC	1 cut(s)	1341
EcoT22I	ATGCAT	1 cut(s)	315
EcoT38I	GRGCYC	1 cut(s)	795
FaeI	CATG	8 cut(s)	308, 317, 683, 901, 970, 1006, 1339, 1712
FalI	AAGNNNNNCTT	6 cut(s)	315, 347, 1278, 1310, 1435, 1467
FaqI	GGGAC	4 cut(s)	549, 890, 981, 1049
FatI	CATG	8 cut(s)	304, 313, 679, 897, 966, 1002, 1335, 1708
FauI	CCCGC	1 cut(s)	263
FbaI	TGATCA	2 cut(s)	1204, 1609
FblI	GTMKAC	2 cut(s)	450, 1680
Fnu4HI	GCNGC	4 cut(s)	528, 1333, 1378, 1423
FokI	GGATG	5 cut(s)	350, 351, 773, 949, 1412
FriOI	GRGCYC	1 cut(s)	795
Fsp4HI	GCNGC	4 cut(s)	528, 1333, 1378, 1423
FspBI	CTAG	3 cut(s)	608, 848, 1455
GlaI	GCGC	1 cut(s)	93
GluI	GCNGC	4 cut(s)	528, 1333, 1378, 1423
GsaI	CCCAGC	2 cut(s)	146, 655
GsuI	CTGGAG	2 cut(s)	560, 809
HaeIII	GGCC	2 cut(s)	125, 560
HapII	CCGG	4 cut(s)	175, 205, 438, 801
HhaI	GCGC	1 cut(s)	94
Hin1II	CATG	8 cut(s)	308, 317, 683, 901, 970, 1006, 1339, 1712
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HincII	GTYRAC	3 cut(s)	139, 379, 1476
HindII	GTYRAC	3 cut(s)	139, 379, 1476
HinfI	GANTC	6 cut(s)	71, 243, 676, 1124, 1301, 1703
HpaI	GTTAAC	2 cut(s)	139, 379
HpaII	CCGG	4 cut(s)	175, 205, 438, 801
HphI	GGTGA	3 cut(s)	298, 752, 1274
Hpy166II	GTNNAC	7 cut(s)	139, 379, 451, 501, 766, 1476, 1681
Hpy8I	GTNNAC	7 cut(s)	139, 379, 451, 501, 766, 1476, 1681
HpyAV	CCTTC	5 cut(s)	221, 1009, 1253, 1259, 1580
HpyCH4III	ACNGT	3 cut(s)	770, 1355, 1543
HpyCH4IV	ACGT	2 cut(s)	1011, 1105
HpyF10VI	GCNNNNNNNGC	4 cut(s)	131, 524, 1067, 1419
HpyF3I	CTNAG	5 cut(s)	350, 634, 723, 1025, 1056
HpySE526I	ACGT	2 cut(s)	1011, 1105
Hsp92II	CATG	8 cut(s)	308, 317, 683, 901, 970, 1006, 1339, 1712
HspAI	GCGC	1 cut(s)	92
KflI	GGGWCCC	1 cut(s)	877
Ksp22I	TGATCA	2 cut(s)	1204, 1609
KspAI	GTTAAC	2 cut(s)	139, 379
LguI	GCTCTTC	1 cut(s)	802
LmnI	GCTCC	6 cut(s)	178, 665, 724, 790, 1075, 1230
Lsp1109I	GCAGC	4 cut(s)	514, 1344, 1389, 1434
LweI	GCATC	5 cut(s)	336, 971, 1159, 1457, 1529
MaeI	CTAG	3 cut(s)	608, 848, 1455
MaeII	ACGT	2 cut(s)	1011, 1105
MaeIII	GTNAC	4 cut(s)	1007, 1288, 1367, 1543
MbiI	CCGCTC	1 cut(s)	270
MflI	RGATCY	2 cut(s)	904, 937
MhlI	GDGCHC	3 cut(s)	721, 795, 862
MlyI	GAGTC	3 cut(s)	65, 252, 685
MmeI	TCCRAC	2 cut(s)	622, 738
Mph1103I	ATGCAT	1 cut(s)	315
MroXI	GAANNNNTTC	1 cut(s)	1672
MseI	TTAA	7 cut(s)	138, 153, 378, 510, 915, 1359, 1716
MslI	CAYNNNNRTG	1 cut(s)	967
MspA1I	CMGCKG	1 cut(s)	1082
MspI	CCGG	4 cut(s)	175, 205, 438, 801
MspR9I	CCNGG	3 cut(s)	176, 439, 1373
Mva1269I	GAATGC	3 cut(s)	315, 617, 1315
MvaI	CCWGG	1 cut(s)	1373
MvnI	CGCG	1 cut(s)	92
MwoI	GCNNNNNNNGC	4 cut(s)	131, 524, 1067, 1419
NciI	CCSGG	2 cut(s)	176, 439
NlaIII	CATG	8 cut(s)	308, 317, 683, 901, 970, 1006, 1339, 1712
NlaIV	GGNNCC	4 cut(s)	661, 703, 878, 879
NmuCI	GTSAC	2 cut(s)	1007, 1367
NsiI	ATGCAT	1 cut(s)	315
PagI	TCATGA	1 cut(s)	1002
PaqCI	CACCTGC	1 cut(s)	265
PciSI	GCTCTTC	1 cut(s)	802
PctI	GAATGC	3 cut(s)	315, 617, 1315
PdmI	GAANNNNTTC	1 cut(s)	1672
PfeI	GAWTC	3 cut(s)	1124, 1301, 1703
PflMI	CCANNNNNTGG	1 cut(s)	1311
PfoI	TCCNGGA	1 cut(s)	174
PkrI	GCNGC	4 cut(s)	529, 1334, 1379, 1424
Ple19I	CGATCG	1 cut(s)	457
PleI	GAGTC	3 cut(s)	65, 251, 684
PpsI	GAGTC	3 cut(s)	65, 251, 684
PpuMI	RGGWCCY	1 cut(s)	877
PshBI	ATTAAT	1 cut(s)	153
Psp124BI	GAGCTC	1 cut(s)	795
Psp5II	RGGWCCY	1 cut(s)	877
Psp6I	CCWGG	1 cut(s)	1371
PspFI	CCCAGC	2 cut(s)	142, 651
PspGI	CCWGG	1 cut(s)	1371
PspN4I	GGNNCC	4 cut(s)	661, 703, 878, 879
PspPI	GGNCC	3 cut(s)	473, 683, 877
PspPPI	RGGWCCY	1 cut(s)	877
PstI	CTGCAG	1 cut(s)	121
PsuI	RGATCY	2 cut(s)	904, 937
PvuI	CGATCG	1 cut(s)	457
PvuII	CAGCTG	1 cut(s)	1082
RsaI	GTAC	5 cut(s)	500, 545, 767, 1567, 1638
RsaNI	GTAC	5 cut(s)	499, 544, 766, 1566, 1637
RseI	CAYNNNNRTG	1 cut(s)	967
SacI	GAGCTC	1 cut(s)	795
SapI	GCTCTTC	1 cut(s)	802
SaqAI	TTAA	7 cut(s)	138, 153, 378, 510, 915, 1359, 1716
SatI	GCNGC	4 cut(s)	528, 1333, 1378, 1423
Sau96I	GGNCC	3 cut(s)	473, 683, 877
ScaI	AGTACT	1 cut(s)	545
SchI	GAGTC	3 cut(s)	65, 252, 685
ScrFI	CCNGG	3 cut(s)	176, 439, 1373
SduI	GDGCHC	3 cut(s)	721, 795, 862
SfaNI	GCATC	5 cut(s)	336, 971, 1159, 1457, 1529
SfcI	CTRYAG	3 cut(s)	117, 447, 1677
SinI	GGWCC	3 cut(s)	473, 683, 877
SmiMI	CAYNNNNRTG	1 cut(s)	967
SsiI	CCGC	4 cut(s)	270, 284, 1237, 1590
SspI	AATATT	1 cut(s)	1145
SspMI	CTAG	3 cut(s)	608, 848, 1455
SstI	GAGCTC	1 cut(s)	795
StyD4I	CCNGG	3 cut(s)	174, 437, 1371
TaaI	ACNGT	3 cut(s)	770, 1355, 1543
TaiI	ACGT	2 cut(s)	1014, 1108
TaqI	TCGA	3 cut(s)	266, 580, 1724
TatI	WGTACW	2 cut(s)	543, 765
TfiI	GAWTC	3 cut(s)	1124, 1301, 1703
Tru1I	TTAA	7 cut(s)	138, 153, 378, 510, 915, 1359, 1716
Tru9I	TTAA	7 cut(s)	138, 153, 378, 510, 915, 1359, 1716
TscAI	CASTG	2 cut(s)	1360, 1474
TseFI	GTSAC	2 cut(s)	1007, 1367
TseI	GCWGC	4 cut(s)	527, 1332, 1377, 1422
Tsp45I	GTSAC	2 cut(s)	1007, 1367
TspDTI	ATGAA	6 cut(s)	421, 441, 767, 991, 1293, 1308
TspGWI	ACGGA	1 cut(s)	1360
TspRI	CASTG	2 cut(s)	1360, 1474
Van91I	CCANNNNNTGG	1 cut(s)	1311
VpaK11BI	GGWCC	3 cut(s)	473, 683, 877
VspI	ATTAAT	1 cut(s)	153
XagI	CCTNNNNNAGG	1 cut(s)	871
XapI	RAATTY	6 cut(s)	199, 212, 428, 743, 1222, 1251
XbaI	TCTAGA	1 cut(s)	1454
XmiI	GTMKAC	2 cut(s)	450, 1680
XmnI	GAANNNNTTC	1 cut(s)	1672
XspI	CTAG	3 cut(s)	608, 848, 1455
ZrmI	AGTACT	1 cut(s)	545
Zsp2I	ATGCAT	1 cut(s)	315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.