Rroxscaffold_7G00183870
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
23054710 .. 23057489
2780 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00183870.1

Sequence Viewer

Length: 1299 bp
ATGAGTTGCTTTTCGTGCTTTTCATCTCATGAAAAGAAAGCATCTGCCAAAAGATCAAATAGTGGGAAGAGAGAACAACTTTTGACTCCTTCCGAAAGGGAACCGACTAATAATGTAGCACCTGCTGAAGTGCCTAAACAAGCACCGGCTGCTGAGCAAACCACAGACAAAAAGAATGCCAATGCAAATGCCAATAAAGATGGGGGTCATAATATTGCTGCACAAACTTTCACCTTCCGGGAACTGGCAACAGCAACAAAGAACTTCCGACAAGAATGTCTGATAGGCGAGGGTGGATTTGGAAGAGTTTATAAGGGGAAGCTTGAAACAACAGAACAGATTGTAGCTGTGAAGCAACTTGATAGGAATGGCTTGCAAGGCAATAGAGAGTTCCTTGTTGAGGTGTTGATGTTGAGCCTCTTACACCATGACAATTTAGTGAATCTTATCGGATATTGCGCTGATGGTGATCAGAGACTTCTGGTGTATGAATACATGCCTTTGGGATCTTTGGAAGACCATTTATTAGACCTCCCATCAGAGCAAAAGCCATTAGATTGGTTCAAGAGAATGAAGATAGCTCTAGGAGCTGCCAAGGGTCTAGAATACTTGCACGATAAGGCGAATCCTCCTGTTATTTACCGCGATTTAAAATCTTCAAACATCCTATTAGATGGTGATTTCAATGCAAAACTCTCTGATTTCGGGCTAGCTAAGCTTGGACCGGTTGGAGACAAGACACATGTATCTTCAAGAATAATGGGCACGTACGGGTATTGTGCCCCAGAGTACCAAAGAACAGGCCAACTGACTGTTAAGTCGGATGTGTACAGTTTTGGAGTTGTGTTGTTAGAACTGATCACCGGAAGAAGAGCAATTGACACCACAAGGCCAACAAGGGAGCAAAATCTAGTGACTTGGGCAGAGCCAGTGTTTAAGGATCCTCATAAGTTTCCGGAACTAGCTGATCCACTTCTTCAAGGAGACTATCCGGTAAGAGCATTGAATCAAGCAGTTGCAGTTGCAGCAATGTGTCTTCATGACGAAGCACCAGCTCGTCCCTTAATGAGTGATGTGGTCAGTGCTCTCAGTTTCCTTGGGACTGATGATGACGAAAGTGTTCCCGGCTCGCCTCTACAATCTGATGATGAAGAAATGTCCAACGTAGAAGATGAGAATCCAAAGGATGAAGAAACTGTAAGGGAACGCGAACGAGCTGTGGCAGAAGCCATAGAATGGGGCTCAACGTCAAGGAGCAATGCAGCCACGTCAAAGTTGGAAAGTACTGCTTCATTGTAA

Protein Analysis

432

Amino Acids

47.6

Weight (kDa)

5.2

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 91 - 302 2.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 93 - 304 6.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 312
AarI CACCTGC 1 cut(s) 130
AasI GACNNNNNNGTC 2 cut(s) 276, 817
Acc36I ACCTGC 1 cut(s) 130
AccB7I CCANNNNNTGG 1 cut(s) 1236
AccII CGCG 2 cut(s) 645, 1209
AccIII TCCGGA 1 cut(s) 955
AciI CCGC 1 cut(s) 643
AclWI GGATC 4 cut(s) 514, 935, 948, 962
AcuI CTGAAG 1 cut(s) 147
AfaI GTAC 4 cut(s) 770, 791, 830, 1285
AfiI CCNNNNNNNGG 3 cut(s) 244, 400, 1236
AflIII ACRYGT 1 cut(s) 742
AgeI ACCGGT 1 cut(s) 724
AgsI TTSAA 7 cut(s) 326, 565, 660, 685, 753, 980, 1006
AjiI CACGTC 1 cut(s) 1269
AluBI AGCT 9 cut(s) 322, 347, 581, 590, 713, 718, 965, 1055, 1217
AluI AGCT 9 cut(s) 322, 347, 581, 590, 713, 718, 965, 1055, 1217
Alw21I GWGCWC 1 cut(s) 1087
Alw26I GTCTC 3 cut(s) 469, 726, 978
AlwI GGATC 4 cut(s) 514, 935, 948, 962
Aor13HI TCCGGA 1 cut(s) 955
AoxI GGCC 2 cut(s) 802, 890
ApeKI GCWGC 5 cut(s) 149, 218, 590, 1025, 1262
AsiGI ACCGGT 1 cut(s) 724
Asp700I GAANNNNTTC 1 cut(s) 1119
AspLEI GCGC 1 cut(s) 461
AspS9I GGNCC 1 cut(s) 722
AsuC2I CCSGG 2 cut(s) 239, 1125
AsuHPI GGTGA 4 cut(s) 223, 479, 689, 853
AsuNHI GCTAGC 1 cut(s) 709
AvaII GGWCC 1 cut(s) 722
BaeGI GKGCMC 2 cut(s) 767, 784
BaeI ACNNNNGTAYC 2 cut(s) 729, 762
BamHI GGATCC 1 cut(s) 940
BanII GRGCYC 1 cut(s) 1244
BbsI GAAGAC 2 cut(s) 522, 1028
Bbv12I GWGCWC 1 cut(s) 1087
BbvI GCAGC 5 cut(s) 136, 205, 577, 1037, 1274
BccI CCATC 4 cut(s) 194, 458, 544, 668
BclI TGATCA 2 cut(s) 469, 858
BcnI CCSGG 2 cut(s) 239, 1125
BcoDI GTCTC 3 cut(s) 469, 726, 978
BfaI CTAG 5 cut(s) 584, 602, 710, 911, 962
BfuAI ACCTGC 1 cut(s) 130
BisI GCNGC 5 cut(s) 150, 219, 591, 1026, 1263
BlpI GCTNAGC 2 cut(s) 153, 714
BlsI GCNGC 5 cut(s) 151, 220, 592, 1027, 1264
BmcAI AGTACT 1 cut(s) 1285
Bme1390I CCNGG 2 cut(s) 239, 1125
Bme18I GGWCC 1 cut(s) 722
BmgBI CACGTC 1 cut(s) 1269
BmgT120I GGNCC 1 cut(s) 722
BmiI GGNNCC 2 cut(s) 102, 942
BmrFI CCNGG 2 cut(s) 239, 1125
BmsI GCATC 1 cut(s) 50
BmtI GCTAGC 1 cut(s) 713
BpiI GAAGAC 2 cut(s) 522, 1028
Bpu1102I GCTNAGC 2 cut(s) 153, 714
BpuMI CCSGG 2 cut(s) 239, 1125
BsaAI YACGTR 1 cut(s) 768
BsaBI GATNNNNATC 2 cut(s) 468, 1176
BsaJI CCNNGG 2 cut(s) 594, 1096
BsaWI WCCGGW 4 cut(s) 724, 863, 955, 991
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 400, 1236
Bse118I RCCGGY 2 cut(s) 145, 724
Bse1I ACTGG 2 cut(s) 249, 929
Bse3DI GCAATG 2 cut(s) 1035, 1264
Bse8I GATNNNNATC 2 cut(s) 468, 1176
BseAI TCCGGA 1 cut(s) 955
BseDI CCNNGG 2 cut(s) 594, 1096
BseGI GGATG 3 cut(s) 663, 829, 1192
BseJI GATNNNNATC 2 cut(s) 468, 1176
BseLI CCNNNNNNNGG 3 cut(s) 244, 400, 1236
BseMI GCAATG 2 cut(s) 1035, 1264
BseMII CTCAG 2 cut(s) 144, 1102
BseNI ACTGG 2 cut(s) 249, 929
BseSI GKGCMC 2 cut(s) 767, 784
BseXI GCAGC 5 cut(s) 136, 205, 577, 1037, 1274
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 2 cut(s) 645, 1209
BshFI GGCC 2 cut(s) 804, 892
BshTI ACCGGT 1 cut(s) 724
BsiHKAI GWGCWC 1 cut(s) 1087
BsiSI CCGG 7 cut(s) 146, 238, 725, 864, 956, 992, 1125
BsiWI CGTACG 1 cut(s) 768
BslFI GGGAC 2 cut(s) 1044, 1114
BslI CCNNNNNNNGG 3 cut(s) 244, 400, 1236
BsmAI GTCTC 3 cut(s) 469, 726, 978
BsmFI GGGAC 2 cut(s) 1044, 1114
BsmI GAATGC 1 cut(s) 181
BsnI GGCC 2 cut(s) 804, 892
Bsp1286I GDGCHC 4 cut(s) 767, 784, 1087, 1244
Bsp13I TCCGGA 1 cut(s) 955
Bsp1407I TGTACA 1 cut(s) 828
Bsp143I GATC 6 cut(s) 53, 469, 506, 858, 940, 967
Bsp1720I GCTNAGC 2 cut(s) 153, 714
BspACI CCGC 1 cut(s) 643
BspANI GGCC 2 cut(s) 804, 892
BspCNI CTCAG 2 cut(s) 145, 1101
BspEI TCCGGA 1 cut(s) 955
BspFNI CGCG 2 cut(s) 645, 1209
BspHI TCATGA 2 cut(s) 28, 1039
BspLI GGNNCC 2 cut(s) 102, 942
BspMI ACCTGC 1 cut(s) 130
BspOI GCTAGC 1 cut(s) 713
BspPI GGATC 4 cut(s) 514, 935, 948, 962
BspQI GCTCTTC 1 cut(s) 865
BsrDI GCAATG 2 cut(s) 1035, 1264
BsrFI RCCGGY 2 cut(s) 145, 724
BsrGI TGTACA 1 cut(s) 828
BsrI ACTGG 2 cut(s) 249, 929
BssAI RCCGGY 2 cut(s) 145, 724
BssECI CCNNGG 2 cut(s) 594, 1096
BssMI GATC 6 cut(s) 53, 469, 506, 858, 940, 967
BssT1I CCWWGG 2 cut(s) 594, 1096
Bst4CI ACNGT 3 cut(s) 814, 833, 1198
Bst6I CTCTTC 3 cut(s) 62, 298, 865
BstAPI GCANNNNNTGC 1 cut(s) 149
BstAUI TGTACA 1 cut(s) 828
BstBAI YACGTR 1 cut(s) 768
BstC8I GCNNGC 3 cut(s) 374, 711, 1130
BstDEI CTNAG 3 cut(s) 153, 714, 1088
BstENI CCTNNNNNAGG 1 cut(s) 398
BstF5I GGATG 3 cut(s) 663, 829, 1192
BstFNI CGCG 2 cut(s) 645, 1209
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 6 cut(s) 56, 472, 509, 861, 943, 970
BstMAI GTCTC 3 cut(s) 469, 726, 978
BstMBI GATC 6 cut(s) 53, 469, 506, 858, 940, 967
BstMWI GCNNNNNNNGC 6 cut(s) 15, 149, 378, 587, 715, 1025
BstNSI RCATGY 2 cut(s) 499, 746
BstSCI CCNGG 2 cut(s) 237, 1123
BstSLI GKGCMC 2 cut(s) 767, 784
BstUI CGCG 2 cut(s) 645, 1209
BstV1I GCAGC 5 cut(s) 136, 205, 577, 1037, 1274
BstV2I GAAGAC 2 cut(s) 522, 1028
BstX2I RGATCY 2 cut(s) 506, 940
BstXI CCANNNNNNTGG 1 cut(s) 558
BstYI RGATCY 2 cut(s) 506, 940
BsuRI GGCC 2 cut(s) 804, 892
BtrI CACGTC 1 cut(s) 1269
BtsCI GGATG 3 cut(s) 663, 829, 1192
BtsIMutI CAGTG 2 cut(s) 936, 1087
BveI ACCTGC 1 cut(s) 130
Cac8I GCNNGC 3 cut(s) 374, 711, 1130
CciI TCATGA 2 cut(s) 28, 1039
CfoI GCGC 1 cut(s) 461
Cfr10I RCCGGY 2 cut(s) 145, 724
Cfr13I GGNCC 1 cut(s) 722
Csp6I GTAC 4 cut(s) 769, 790, 829, 1284
CspAI ACCGGT 1 cut(s) 724
CviAII CATG 5 cut(s) 29, 428, 496, 743, 1040
CviQI GTAC 4 cut(s) 769, 790, 829, 1284
DdeI CTNAG 3 cut(s) 153, 714, 1088
DpnI GATC 6 cut(s) 55, 471, 508, 860, 942, 969
DpnII GATC 6 cut(s) 53, 469, 506, 858, 940, 967
DraI TTTAAA 1 cut(s) 651
DrdI GACNNNNNNGTC 2 cut(s) 276, 817
DseDI GACNNNNNNGTC 2 cut(s) 276, 817
Eam1104I CTCTTC 3 cut(s) 62, 298, 865
EarI CTCTTC 3 cut(s) 62, 298, 865
Eco130I CCWWGG 2 cut(s) 594, 1096
Eco24I GRGCYC 1 cut(s) 1244
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 147
EcoNI CCTNNNNNAGG 1 cut(s) 398
EcoT14I CCWWGG 2 cut(s) 594, 1096
EcoT38I GRGCYC 1 cut(s) 1244
ErhI CCWWGG 2 cut(s) 594, 1096
FaeI CATG 5 cut(s) 32, 431, 499, 746, 1043
FalI AAGNNNNNCTT 1 cut(s) 1273
FaqI GGGAC 2 cut(s) 1044, 1114
FatI CATG 5 cut(s) 28, 427, 495, 742, 1039
FbaI TGATCA 2 cut(s) 469, 858
Fnu4HI GCNGC 5 cut(s) 150, 219, 591, 1026, 1263
FokI GGATG 3 cut(s) 650, 836, 1199
FriOI GRGCYC 1 cut(s) 1244
Fsp4HI GCNGC 5 cut(s) 150, 219, 591, 1026, 1263
FspBI CTAG 5 cut(s) 584, 602, 710, 911, 962
GlaI GCGC 1 cut(s) 460
GluI GCNGC 5 cut(s) 150, 219, 591, 1026, 1263
HaeIII GGCC 2 cut(s) 804, 892
HapII CCGG 7 cut(s) 146, 238, 725, 864, 956, 992, 1125
HhaI GCGC 1 cut(s) 461
Hin1II CATG 5 cut(s) 32, 431, 499, 746, 1043
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HindIII AAGCTT 2 cut(s) 320, 716
HinfI GANTC 5 cut(s) 85, 442, 625, 1006, 1177
HpaII CCGG 7 cut(s) 146, 238, 725, 864, 956, 992, 1125
HphI GGTGA 4 cut(s) 223, 479, 689, 853
Hpy166II GTNNAC 1 cut(s) 829
Hpy188I TCNGA 9 cut(s) 94, 269, 282, 452, 474, 541, 700, 823, 1144
Hpy188III TCNNGA 6 cut(s) 29, 565, 602, 753, 956, 1040
Hpy8I GTNNAC 1 cut(s) 829
HpyAV CCTTC 2 cut(s) 99, 244
HpyCH4III ACNGT 3 cut(s) 814, 833, 1198
HpyCH4IV ACGT 4 cut(s) 767, 1164, 1247, 1268
HpyCH4V TGCA 8 cut(s) 185, 221, 376, 613, 689, 1019, 1025, 1262
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 149, 378, 587, 715, 1025
HpyF3I CTNAG 3 cut(s) 153, 714, 1088
HpySE526I ACGT 4 cut(s) 767, 1164, 1247, 1268
Hsp92II CATG 5 cut(s) 32, 431, 499, 746, 1043
HspAI GCGC 1 cut(s) 459
Kpn2I TCCGGA 1 cut(s) 955
Ksp22I TGATCA 2 cut(s) 469, 858
Kzo9I GATC 6 cut(s) 53, 469, 506, 858, 940, 967
LguI GCTCTTC 1 cut(s) 865
LmnI GCTCC 3 cut(s) 587, 901, 1254
Lsp1109I GCAGC 5 cut(s) 136, 205, 577, 1037, 1274
LweI GCATC 1 cut(s) 50
MaeI CTAG 5 cut(s) 584, 602, 710, 911, 962
MaeII ACGT 4 cut(s) 767, 1164, 1247, 1268
MaeIII GTNAC 1 cut(s) 913
MalI GATC 6 cut(s) 55, 471, 508, 860, 942, 969
MboI GATC 6 cut(s) 53, 469, 506, 858, 940, 967
MfeI CAATTG 1 cut(s) 876
MflI RGATCY 2 cut(s) 506, 940
MhlI GDGCHC 4 cut(s) 767, 784, 1087, 1244
MluCI AATT 2 cut(s) 433, 876
MlyI GAGTC 1 cut(s) 79
MmeI TCCRAC 5 cut(s) 292, 709, 801, 1185, 1257
MnlI CCTC 7 cut(s) 283, 394, 428, 542, 639, 954, 1143
MroI TCCGGA 1 cut(s) 955
MroXI GAANNNNTTC 1 cut(s) 1119
MseI TTAA 4 cut(s) 650, 816, 936, 1064
MspI CCGG 7 cut(s) 146, 238, 725, 864, 956, 992, 1125
MspR9I CCNGG 2 cut(s) 239, 1125
MunI CAATTG 1 cut(s) 876
Mva1269I GAATGC 1 cut(s) 181
MvnI CGCG 2 cut(s) 645, 1209
MwoI GCNNNNNNNGC 6 cut(s) 15, 149, 378, 587, 715, 1025
NciI CCSGG 2 cut(s) 239, 1125
NdeII GATC 6 cut(s) 53, 469, 506, 858, 940, 967
NheI GCTAGC 1 cut(s) 709
NlaIII CATG 5 cut(s) 32, 431, 499, 746, 1043
NlaIV GGNNCC 2 cut(s) 102, 942
NmuCI GTSAC 1 cut(s) 913
NspI RCATGY 2 cut(s) 499, 746
PagI TCATGA 2 cut(s) 28, 1039
PaqCI CACCTGC 1 cut(s) 130
PciI ACATGT 1 cut(s) 742
PciSI GCTCTTC 1 cut(s) 865
PctI GAATGC 1 cut(s) 181
PdmI GAANNNNTTC 1 cut(s) 1119
PfeI GAWTC 4 cut(s) 442, 625, 1006, 1177
Pfl23II CGTACG 1 cut(s) 768
PflMI CCANNNNNTGG 1 cut(s) 1236
PfoI TCCNGGA 1 cut(s) 237
PinAI ACCGGT 1 cut(s) 724
PkrI GCNGC 5 cut(s) 151, 220, 592, 1027, 1264
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
Ppu21I YACGTR 1 cut(s) 768
PscI ACATGT 1 cut(s) 742
PsiI TTATAA 1 cut(s) 312
PspLI CGTACG 1 cut(s) 768
PspN4I GGNNCC 2 cut(s) 102, 942
PspPI GGNCC 1 cut(s) 722
PsuI RGATCY 2 cut(s) 506, 940
RsaI GTAC 4 cut(s) 770, 791, 830, 1285
RsaNI GTAC 4 cut(s) 769, 790, 829, 1284
SapI GCTCTTC 1 cut(s) 865
SaqAI TTAA 4 cut(s) 650, 816, 936, 1064
SatI GCNGC 5 cut(s) 150, 219, 591, 1026, 1263
Sau3AI GATC 6 cut(s) 53, 469, 506, 858, 940, 967
Sau96I GGNCC 1 cut(s) 722
ScaI AGTACT 1 cut(s) 1285
SchI GAGTC 1 cut(s) 79
ScrFI CCNGG 2 cut(s) 239, 1125
SduI GDGCHC 4 cut(s) 767, 784, 1087, 1244
SfaNI GCATC 1 cut(s) 50
SinI GGWCC 1 cut(s) 722
Sse9I AATT 2 cut(s) 433, 876
SsiI CCGC 1 cut(s) 643
SspI AATATT 1 cut(s) 214
SspMI CTAG 5 cut(s) 584, 602, 710, 911, 962
StyD4I CCNGG 2 cut(s) 237, 1123
StyI CCWWGG 2 cut(s) 594, 1096
TaaI ACNGT 3 cut(s) 814, 833, 1198
TaiI ACGT 4 cut(s) 770, 1167, 1250, 1271
TasI AATT 2 cut(s) 433, 876
TatI WGTACW 2 cut(s) 828, 1283
TfiI GAWTC 4 cut(s) 442, 625, 1006, 1177
Tru1I TTAA 4 cut(s) 650, 816, 936, 1064
Tru9I TTAA 4 cut(s) 650, 816, 936, 1064
TscAI CASTG 2 cut(s) 936, 1087
TseFI GTSAC 1 cut(s) 913
TseI GCWGC 5 cut(s) 149, 218, 590, 1025, 1262
Tsp45I GTSAC 1 cut(s) 913
TspDTI ATGAA 8 cut(s) 12, 45, 504, 587, 1028, 1164, 1203, 1281
TspRI CASTG 2 cut(s) 936, 1087
Van91I CCANNNNNTGG 1 cut(s) 1236
VpaK11BI GGWCC 1 cut(s) 722
XagI CCTNNNNNAGG 1 cut(s) 398
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 2 cut(s) 499, 746
XcmI CCANNNNNNNNNTGG 1 cut(s) 1273
XmnI GAANNNNTTC 1 cut(s) 1119
XspI CTAG 5 cut(s) 584, 602, 710, 911, 962
ZrmI AGTACT 1 cut(s) 1285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.