MD05G1176700.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
30409463 .. 30411567
2105 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1176700.v1.1.491

Sequence Viewer

Length: 1329 bp
ATGAGTTGCTTTTCTTGCTTTTCATCCCATGAAAAGAAATCATCTAACACAAGATCAAATAGTGGGAGGAGAGCACAATTGCCTACCACTGTTTCTCAGAAGGAACACAATGTTCCACCAGCACAACAGCCTTGGCCGCCCCCAGCTGAAGTTCCTAAACCAAAACCTACACCACCAGCTGAGAATCCAGCAGCCAATGCCCATAATGTCAACAAAGAACCCGTAAACCACAACAACATTGCTGCGCAAACTTTCACATTCCGGGAATTAGCGACAGCGACGAAGAACTTCAGGCAAGAATGCCTCATTGGAGAGGGCGGATTTGGAAGAGTTTACAAGGGAAAACTTGACAAAATAGAACAGGTTGTGGCTGTGAAGCAACTTGACAGGAATGGCTTGCAAGGAAACCGAGAGTTTCTTGTCGAGGTGTTGATGTTGAGCCTCTTACACCACGAAAATTTAGTAAATCTTATCGGATATTGCGCAGATGGTGATCAGAGACTTCTTGTCTACGAGTACATGCCCTTGGGATCTGTGGAAGACCATTTACTAGATCTTCCGGAAGGCCAGACGCCACTAGATTGGTTCAAAAGAATGAGAATAGCTCTGGGAGCTGCCAAGGGACTAGAATACTTGCATGACGAGGCAAATCCACCTGTTATCTACCGCGATTTAAAATCTTCCAACATTTTACTCGACGCTGATTTCAATGCAAAACTCTCTGATTTCGGGTTAGCTAAGCTTGGACCTATTGGAGACAAGACTCATGTATCTTCAAGAGTAATGGGAACATATGGTTATTGTGCCCCAGAGTACCAAAGAACAGGACAGCTCACGGTCAAGTCTGATGTTTACAGTTTCGGAGTTGTTTTATTGGAATTGATCACTGGAAGGAGAGCAGTTGACACCACACTATCAACCAGGGAGCAAAATCTAGTTGCTTGGGCACAACCAGTATTCAAGGATCCTAATAGGTATCCAGAACTTGCTGATCCACTTCTTCAAGGAAACTTTCCTGTGAGAGCACTAAATCAAGCCATGGCAGTTGCAGCAATGTGCCTCCACGAGGAAGCACCTGTTCGTCCCTTGATAAGCGATGTGGTCAGTGCTCTTAGTGTCCTCGGAACTGGTCCGGACACTGCTGCCTCGCCTATAAGCAGCCTTCCCTCTCCATCACCGGATCAAACAATGGTCATAAACGAGGATTCTCAGCTCGAAGACAGTGTAACCGAACGCCAACGCGCTGTGGCAGAAGCCATGGAATGGGGTTCGTGCTCAAGGCACAATGGAGTGGCAGCATCACGGTGTGGAAGTACTTCTTCCTTGTAA

Protein Analysis

443

Amino Acids

48.4

Weight (kDa)

5.92

Isoelectric Point (pI)

45.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 99 - 307 2.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 101 - 303 3e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 246, 484
AccB7I CCANNNNNTGG 1 cut(s) 1263
AccI GTMKAC 1 cut(s) 510
AccII CGCG 2 cut(s) 669, 1242
AccIII TCCGGA 2 cut(s) 559, 1132
AciI CCGC 3 cut(s) 137, 318, 667
AclWI GGATC 5 cut(s) 538, 959, 972, 986, 1188
AcoI YGGCCR 1 cut(s) 134
AcsI RAATTY 1 cut(s) 457
AcuI CTGAAG 2 cut(s) 168, 274
AcyI GRCGYC 1 cut(s) 572
AdeI CACNNNGTG 1 cut(s) 1307
AfaI GTAC 3 cut(s) 518, 815, 1315
AfiI CCNNNNNNNGG 2 cut(s) 1066, 1263
AgsI TTSAA 5 cut(s) 589, 709, 777, 961, 1004
AhdI GACNNNNNGTC 1 cut(s) 506
AjnI CCWGG 1 cut(s) 920
AjuI GAANNNNNNNTTGG 2 cut(s) 291, 323
AluBI AGCT 8 cut(s) 146, 179, 605, 614, 737, 742, 832, 1213
AluI AGCT 8 cut(s) 146, 179, 605, 614, 737, 742, 832, 1213
Alw21I GWGCWC 4 cut(s) 76, 1027, 1111, 1277
Alw26I GTCTC 2 cut(s) 493, 750
AlwI GGATC 5 cut(s) 538, 959, 972, 986, 1188
Aor13HI TCCGGA 2 cut(s) 559, 1132
AoxI GGCC 2 cut(s) 134, 565
ApeKI GCWGC 7 cut(s) 191, 242, 614, 1049, 1142, 1158, 1295
ApoI RAATTY 1 cut(s) 457
Asp700I GAANNNNTTC 2 cut(s) 287, 1315
AspLEI GCGC 3 cut(s) 247, 485, 1244
AspS9I GGNCC 2 cut(s) 746, 1130
AsuC2I CCSGG 1 cut(s) 263
AsuHPI GGTGA 2 cut(s) 503, 1167
AvaII GGWCC 2 cut(s) 746, 1130
BaeGI GKGCMC 2 cut(s) 808, 949
BaeI ACNNNNGTAYC 2 cut(s) 753, 786
BamHI GGATCC 1 cut(s) 964
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BauI CACGAG 1 cut(s) 1064
BbsI GAAGAC 2 cut(s) 546, 1224
Bbv12I GWGCWC 4 cut(s) 76, 1027, 1111, 1277
BbvI GCAGC 7 cut(s) 203, 229, 601, 1061, 1129, 1170, 1307
BccI CCATC 2 cut(s) 482, 1180
BciT130I CCWGG 1 cut(s) 922
BciVI GTATCC 1 cut(s) 987
BclI TGATCA 2 cut(s) 493, 882
BcnI CCSGG 1 cut(s) 263
BcoDI GTCTC 2 cut(s) 493, 750
BfaI CTAG 4 cut(s) 551, 578, 626, 935
BfuI GTATCC 1 cut(s) 987
BglII AGATCT 1 cut(s) 553
BisI GCNGC 8 cut(s) 137, 192, 243, 615, 1050, 1143, 1159, 1296
BlpI GCTNAGC 1 cut(s) 738
BlsI GCNGC 8 cut(s) 138, 193, 244, 616, 1051, 1144, 1160, 1297
BmcAI AGTACT 1 cut(s) 1315
Bme1390I CCNGG 2 cut(s) 263, 922
Bme18I GGWCC 2 cut(s) 746, 1130
BmeRI GACNNNNNGTC 1 cut(s) 506
BmgT120I GGNCC 2 cut(s) 746, 1130
BmiI GGNNCC 1 cut(s) 966
BmrFI CCNGG 2 cut(s) 263, 922
BmsI GCATC 1 cut(s) 1307
BpiI GAAGAC 2 cut(s) 546, 1224
BplI GAGNNNNNCTC 2 cut(s) 589, 621
Bpu1102I GCTNAGC 1 cut(s) 738
BpuEI CTTGAG 1 cut(s) 1261
BpuMI CCSGG 1 cut(s) 263
BsaBI GATNNNNATC 1 cut(s) 492
BsaHI GRCGYC 1 cut(s) 572
BsaJI CCNNGG 7 cut(s) 131, 525, 618, 921, 1038, 1120, 1257
BsaWI WCCGGW 3 cut(s) 559, 1132, 1177
Bsc4I CCNNNNNNNGG 2 cut(s) 1066, 1263
Bse1I ACTGG 3 cut(s) 892, 953, 1132
Bse3DI GCAATG 2 cut(s) 237, 1059
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 2 cut(s) 559, 1132
BseBI CCWGG 1 cut(s) 922
BseDI CCNNGG 7 cut(s) 131, 525, 618, 921, 1038, 1120, 1257
BseGI GGATG 1 cut(s) 23
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 2 cut(s) 1066, 1263
BseMI GCAATG 2 cut(s) 237, 1059
BseMII CTCAG 3 cut(s) 110, 171, 1223
BseNI ACTGG 3 cut(s) 892, 953, 1132
BseRI GAGGAG 1 cut(s) 82
BseSI GKGCMC 2 cut(s) 808, 949
BseXI GCAGC 7 cut(s) 203, 229, 601, 1061, 1129, 1170, 1307
BseYI CCCAGC 1 cut(s) 142
Bsh1236I CGCG 2 cut(s) 669, 1242
BshFI GGCC 2 cut(s) 136, 567
BsiHKAI GWGCWC 4 cut(s) 76, 1027, 1111, 1277
BsiSI CCGG 4 cut(s) 262, 560, 1133, 1178
BslFI GGGAC 2 cut(s) 636, 1068
BslI CCNNNNNNNGG 2 cut(s) 1066, 1263
BsmAI GTCTC 2 cut(s) 493, 750
BsmFI GGGAC 2 cut(s) 636, 1068
BsmI GAATGC 1 cut(s) 305
BsnI GGCC 2 cut(s) 136, 567
Bsp1286I GDGCHC 6 cut(s) 76, 808, 949, 1027, 1111, 1277
Bsp13I TCCGGA 2 cut(s) 559, 1132
Bsp143I GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
Bsp1720I GCTNAGC 1 cut(s) 738
Bsp19I CCATGG 2 cut(s) 1038, 1257
BspACI CCGC 3 cut(s) 137, 318, 667
BspANI GGCC 2 cut(s) 136, 567
BspCNI CTCAG 3 cut(s) 109, 172, 1222
BspEI TCCGGA 2 cut(s) 559, 1132
BspFNI CGCG 2 cut(s) 669, 1242
BspLI GGNNCC 1 cut(s) 966
BspPI GGATC 5 cut(s) 538, 959, 972, 986, 1188
BsrDI GCAATG 2 cut(s) 237, 1059
BsrI ACTGG 3 cut(s) 892, 953, 1132
BssECI CCNNGG 7 cut(s) 131, 525, 618, 921, 1038, 1120, 1257
BssMI GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
BssNI GRCGYC 1 cut(s) 572
BssSI CACGAG 1 cut(s) 1064
BssT1I CCWWGG 5 cut(s) 131, 525, 618, 1038, 1257
Bst2BI CACGAG 1 cut(s) 1064
Bst2UI CCWGG 1 cut(s) 922
Bst4CI ACNGT 5 cut(s) 91, 838, 857, 1223, 1305
Bst6I CTCTTC 1 cut(s) 322
BstACI GRCGYC 1 cut(s) 572
BstAPI GCANNNNNTGC 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 398
BstDEI CTNAG 5 cut(s) 96, 180, 738, 1112, 1209
BstDSI CCRYGG 2 cut(s) 1038, 1257
BstENI CCTNNNNNAGG 1 cut(s) 1064
BstF5I GGATG 1 cut(s) 23
BstFNI CGCG 2 cut(s) 669, 1242
BstHHI GCGC 3 cut(s) 247, 485, 1244
BstKTI GATC 8 cut(s) 56, 496, 533, 556, 885, 967, 994, 1183
BstMAI GTCTC 2 cut(s) 493, 750
BstMBI GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
BstMWI GCNNNNNNNGC 5 cut(s) 15, 136, 197, 611, 1049
BstNI CCWGG 1 cut(s) 922
BstNSI RCATGY 1 cut(s) 523
BstSCI CCNGG 2 cut(s) 261, 920
BstSLI GKGCMC 2 cut(s) 808, 949
BstUI CGCG 2 cut(s) 669, 1242
BstV1I GCAGC 7 cut(s) 203, 229, 601, 1061, 1129, 1170, 1307
BstV2I GAAGAC 2 cut(s) 546, 1224
BstX2I RGATCY 3 cut(s) 530, 553, 964
BstXI CCANNNNNNTGG 1 cut(s) 582
BstYI RGATCY 3 cut(s) 530, 553, 964
BsuI GTATCC 1 cut(s) 987
BsuRI GGCC 2 cut(s) 136, 567
BtgI CCRYGG 2 cut(s) 1038, 1257
BtgZI GCGATG 1 cut(s) 1110
BtsCI GGATG 1 cut(s) 23
BtsI GCAGTG 1 cut(s) 1137
BtsIMutI CAGTG 5 cut(s) 87, 885, 1111, 1137, 1228
Cac8I GCNNGC 1 cut(s) 398
CfoI GCGC 3 cut(s) 247, 485, 1244
Cfr13I GGNCC 2 cut(s) 746, 1130
CseI GACGC 2 cut(s) 580, 707
Csp6I GTAC 3 cut(s) 517, 814, 1314
CviAII CATG 6 cut(s) 29, 520, 638, 767, 1039, 1258
CviQI GTAC 3 cut(s) 517, 814, 1314
DdeI CTNAG 5 cut(s) 96, 180, 738, 1112, 1209
DpnI GATC 8 cut(s) 55, 495, 532, 555, 884, 966, 993, 1182
DpnII GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
DraI TTTAAA 1 cut(s) 675
DraIII CACNNNGTG 1 cut(s) 1307
DriI GACNNNNNGTC 1 cut(s) 506
EaeI YGGCCR 1 cut(s) 134
Eam1104I CTCTTC 1 cut(s) 322
Eam1105I GACNNNNNGTC 1 cut(s) 506
EarI CTCTTC 1 cut(s) 322
EciI GGCGGA 1 cut(s) 333
Eco130I CCWWGG 5 cut(s) 131, 525, 618, 1038, 1257
Eco47I GGWCC 2 cut(s) 746, 1130
Eco57I CTGAAG 2 cut(s) 168, 274
EcoNI CCTNNNNNAGG 1 cut(s) 1064
EcoRII CCWGG 1 cut(s) 920
EcoT14I CCWWGG 5 cut(s) 131, 525, 618, 1038, 1257
ErhI CCWWGG 5 cut(s) 131, 525, 618, 1038, 1257
FaeI CATG 6 cut(s) 32, 523, 641, 770, 1042, 1261
FalI AAGNNNNNCTT 1 cut(s) 1303
FaqI GGGAC 2 cut(s) 636, 1068
FatI CATG 6 cut(s) 28, 519, 637, 766, 1038, 1257
FauNDI CATATG 1 cut(s) 793
FbaI TGATCA 2 cut(s) 493, 882
FblI GTMKAC 1 cut(s) 510
Fnu4HI GCNGC 8 cut(s) 137, 192, 243, 615, 1050, 1143, 1159, 1296
FokI GGATG 1 cut(s) 10
Fsp4HI GCNGC 8 cut(s) 137, 192, 243, 615, 1050, 1143, 1159, 1296
FspBI CTAG 4 cut(s) 551, 578, 626, 935
FspI TGCGCA 2 cut(s) 246, 484
GlaI GCGC 3 cut(s) 246, 484, 1243
GluI GCNGC 8 cut(s) 137, 192, 243, 615, 1050, 1143, 1159, 1296
GsaI CCCAGC 1 cut(s) 146
HaeIII GGCC 2 cut(s) 136, 567
HapII CCGG 4 cut(s) 262, 560, 1133, 1178
HgaI GACGC 2 cut(s) 580, 707
HhaI GCGC 3 cut(s) 247, 485, 1244
Hin1I GRCGYC 1 cut(s) 572
Hin1II CATG 6 cut(s) 32, 523, 641, 770, 1042, 1261
Hin6I GCGC 3 cut(s) 245, 483, 1242
HinP1I GCGC 3 cut(s) 245, 483, 1242
HincII GTYRAC 2 cut(s) 211, 904
HindII GTYRAC 2 cut(s) 211, 904
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 3 cut(s) 184, 763, 1205
HpaII CCGG 4 cut(s) 262, 560, 1133, 1178
HphI GGTGA 2 cut(s) 503, 1167
Hpy166II GTNNAC 6 cut(s) 211, 226, 334, 511, 853, 904
Hpy188I TCNGA 7 cut(s) 99, 476, 498, 724, 847, 863, 1124
Hpy188III TCNNGA 4 cut(s) 560, 777, 980, 1133
Hpy8I GTNNAC 6 cut(s) 211, 226, 334, 511, 853, 904
Hpy99I CGWCG 2 cut(s) 283, 701
HpyAV CCTTC 4 cut(s) 94, 557, 885, 1172
HpyCH4III ACNGT 5 cut(s) 91, 838, 857, 1223, 1305
HpyCH4V TGCA 4 cut(s) 400, 637, 713, 1049
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 136, 197, 611, 1049
HpyF3I CTNAG 5 cut(s) 96, 180, 738, 1112, 1209
Hsp92I GRCGYC 1 cut(s) 572
Hsp92II CATG 6 cut(s) 32, 523, 641, 770, 1042, 1261
HspAI GCGC 3 cut(s) 245, 483, 1242
Kpn2I TCCGGA 2 cut(s) 559, 1132
Ksp22I TGATCA 2 cut(s) 493, 882
Kzo9I GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
LmnI GCTCC 2 cut(s) 611, 925
Lsp1109I GCAGC 7 cut(s) 203, 229, 601, 1061, 1129, 1170, 1307
LweI GCATC 1 cut(s) 1307
MaeI CTAG 4 cut(s) 551, 578, 626, 935
MaeIII GTNAC 1 cut(s) 1225
MalI GATC 8 cut(s) 55, 495, 532, 555, 884, 966, 993, 1182
MboI GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
MboII GAAGA 9 cut(s) 295, 339, 548, 551, 672, 765, 992, 1229, 1311
MfeI CAATTG 1 cut(s) 77
MflI RGATCY 3 cut(s) 530, 553, 964
MhlI GDGCHC 6 cut(s) 76, 808, 949, 1027, 1111, 1277
MluCI AATT 4 cut(s) 77, 266, 457, 878
MlyI GAGTC 1 cut(s) 757
MmeI TCCRAC 1 cut(s) 708
MroI TCCGGA 2 cut(s) 559, 1132
MroXI GAANNNNTTC 2 cut(s) 287, 1315
MseI TTAA 1 cut(s) 674
MslI CAYNNNNRTG 1 cut(s) 1303
MspA1I CMGCKG 2 cut(s) 146, 179
MspI CCGG 4 cut(s) 262, 560, 1133, 1178
MspR9I CCNGG 2 cut(s) 263, 922
MunI CAATTG 1 cut(s) 77
Mva1269I GAATGC 1 cut(s) 305
MvaI CCWGG 1 cut(s) 922
MvnI CGCG 2 cut(s) 669, 1242
MwoI GCNNNNNNNGC 5 cut(s) 15, 136, 197, 611, 1049
NciI CCSGG 1 cut(s) 263
NcoI CCATGG 2 cut(s) 1038, 1257
NdeI CATATG 1 cut(s) 793
NdeII GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
NlaIII CATG 6 cut(s) 32, 523, 641, 770, 1042, 1261
NlaIV GGNNCC 1 cut(s) 966
NsbI TGCGCA 2 cut(s) 246, 484
NspI RCATGY 1 cut(s) 523
PctI GAATGC 1 cut(s) 305
PdmI GAANNNNTTC 2 cut(s) 287, 1315
PfeI GAWTC 2 cut(s) 184, 1205
PflMI CCANNNNNTGG 1 cut(s) 1263
PfoI TCCNGGA 1 cut(s) 261
PkrI GCNGC 8 cut(s) 138, 193, 244, 616, 1051, 1144, 1160, 1297
PleI GAGTC 1 cut(s) 757
PpsI GAGTC 1 cut(s) 757
Psp6I CCWGG 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 142
PspGI CCWGG 1 cut(s) 920
PspN4I GGNNCC 1 cut(s) 966
PspPI GGNCC 2 cut(s) 746, 1130
PsuI RGATCY 3 cut(s) 530, 553, 964
PvuII CAGCTG 2 cut(s) 146, 179
RsaI GTAC 3 cut(s) 518, 815, 1315
RsaNI GTAC 3 cut(s) 517, 814, 1314
RseI CAYNNNNRTG 1 cut(s) 1303
SaqAI TTAA 1 cut(s) 674
SatI GCNGC 8 cut(s) 137, 192, 243, 615, 1050, 1143, 1159, 1296
Sau3AI GATC 8 cut(s) 53, 493, 530, 553, 882, 964, 991, 1180
Sau96I GGNCC 2 cut(s) 746, 1130
ScaI AGTACT 1 cut(s) 1315
SchI GAGTC 1 cut(s) 757
ScrFI CCNGG 2 cut(s) 263, 922
SduI GDGCHC 6 cut(s) 76, 808, 949, 1027, 1111, 1277
SfaNI GCATC 1 cut(s) 1307
SinI GGWCC 2 cut(s) 746, 1130
SmiMI CAYNNNNRTG 1 cut(s) 1303
SmlI CTYRAG 1 cut(s) 1276
SmoI CTYRAG 1 cut(s) 1276
Sse9I AATT 4 cut(s) 77, 266, 457, 878
SsiI CCGC 3 cut(s) 137, 318, 667
SspMI CTAG 4 cut(s) 551, 578, 626, 935
StyD4I CCNGG 2 cut(s) 261, 920
StyI CCWWGG 5 cut(s) 131, 525, 618, 1038, 1257
TaaI ACNGT 5 cut(s) 91, 838, 857, 1223, 1305
TaqI TCGA 3 cut(s) 423, 696, 1215
TasI AATT 4 cut(s) 77, 266, 457, 878
TatI WGTACW 2 cut(s) 516, 1313
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 2 cut(s) 184, 1205
Tru1I TTAA 1 cut(s) 674
Tru9I TTAA 1 cut(s) 674
TscAI CASTG 5 cut(s) 94, 892, 1111, 1144, 1228
TseI GCWGC 7 cut(s) 191, 242, 614, 1049, 1142, 1158, 1295
TspDTI ATGAA 2 cut(s) 12, 45
TspRI CASTG 5 cut(s) 94, 892, 1111, 1144, 1228
Van91I CCANNNNNTGG 1 cut(s) 1263
VpaK11BI GGWCC 2 cut(s) 746, 1130
XagI CCTNNNNNAGG 1 cut(s) 1064
XapI RAATTY 1 cut(s) 457
XceI RCATGY 1 cut(s) 523
XmiI GTMKAC 1 cut(s) 510
XmnI GAANNNNTTC 2 cut(s) 287, 1315
XspI CTAG 4 cut(s) 551, 578, 626, 935
ZrmI AGTACT 1 cut(s) 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.