Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003079

Physical Location & Seq

Genomic Coordinates Reverse (-)

48901442 .. 48903846

Gene Structure 2405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025882

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGAGTTGCTTTCCGTGTTTTGGCTCACAGAGAAATAAGAGATCAAGTATCAGGAGAGTAGATCATGCCTCTGCACCGCCTGTTGAACAGGAAATGAAAAAACAAAGACCTGCTGAGAGACATGTGACACACTCAACACACTCAACACACCGGACACACTCAAGTGTGGAAGTTGACGAATCACAAATCAATGCAAAGTGTTTCACTTTCCGTGAGCTAGCAACAGCAACAAAGAACTTCCGTCAGGAGTGCCTTCTGGGCGAAGGTGGATTTGGAAGAGTCTATAAGGGAACTCTTCGGTCGAGTGGGCAGGTGGTGGCTGTGAAGCAACTTGACAGAAATGGAATGCATGGACACAAGGAATTTCTCGGAGAAGTTTTGGTACTAAGCCTCCTACACCATCCAAACATAGTTAATCTAATTGGATATTGTGCCGACGGAGATCAAAGGCTTTTGGTTCATGAATTCATACCAGGGGGTACTCTAGAAGACCGAGTTCTTGCTAATCAAACAGGTAAAATGACATTGGATTGGTACACGCGGATTAAAATAGCTTATGGTGCTGCTCTGGGATTGGAGTACTTGCACGAGAAGGCCAATCCACCCATTATATACCGGGACTTCAAATCTTCAAATATCTTGTTAGATGAAGAATTCAATCCAAAGCTCTCGGATGTTGGACTTGCCAAGCTTGGCCAAGCCGGAGATAAGATGCATGGACCATCAAGGCTGATGGGTGCCTATGGTTTCTGTGCTCCAGAGTACTCGAGAACTGGTGAAGTCTCAATGAAGTCGGATGTGTATAGTTTCGGAGTTATTCTACTGGAGCTAATTACTGGAAGAAGAGCCATTGACACTACAAGAGCAAATGATGAGCAAAATCTAGTTGCTTGGGCACAACCCTTATTCAAGGACCCAAAAAAGTTTCCTGAAATGGCAGATAGTCGTCTTAACAAGCAATTCCCGGAGAAAGATCTAAATCAGGCTGTTGCAATAGCAGCCATGTGTCTGCAAGATGAGGCATCAGTCCGGCCCTTCATGAGTGACGTTGTAACGACTTTAAGTTTTCTTCACACTAGTCCTGCTCCTGCTCCTGTTCCAGCTGATACAATCCCTAGTACTGAAAACCAGGATGGTAACTCTGAATGTGGTTCTGATATTTCTGACGATGATGAGAGCAATGGGGAGGCTTCAGATAATGAGATTATCAGAAGTTCAGACATTAACCACAGCCATGACAACTCAGATAAGGATGGTAATGGCCAAGACGTACGTCAACTAAGTGGTGTAGAATCTAAAGAATGGCATTCATTTGAACGAGACGTAGGCGTTTCTTCAGGTGACGAGAGAAGTAAAAGCAAGAGTAACAAGGGTGATCAAGATATTAGTTTAAGCCAAGATAAATTTGAAAGTGTTACTTCTAGAAGCAACAGTGAAGAATCGAACGGAGAAGGTGTTTCTCATAGCAACAATAGAGTACCACAAAAAGAAGAGAGTACTGTTAAAGTTGGCGGAATTAAGAGCGCAGAATCATCCGAAGTGGATCTCTCAGTCACTCCAGTCGTAGGGAACCTGAATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0038023 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051286 GO:0051704 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

528

Amino Acids

57.98

Weight (kDa)

5.5

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	82 - 351	2.5e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	83 - 354	6.2e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07070 AT3G24790 AT3G24790 AT4G13190 AT4G13190 AT4G13190 AT4G13190 AT4G13190
fragaria_vesca	FvH4_2g19200 FvH4_6g01120
malus_domestica	MD04G1236200.v1.1 MD05G1176700.v1.1 MD10G1165400.v1.1 MD12G1255300.v1.1
prunus_persica	Prupe.6G356200_v2.0.a1 Prupe.8G203800_v2.0.a1
pyrus_communis	pycom05g16290 pycom12g23400
rosa_chinensis	RchiOBHm_Chr3g0448651 RchiOBHm_Chr6g0284981
rosa_laevigata	RLG00000012693 RLG00000025882
rosa_multiflora	Rmu_sc0003116.1_g000035
rosa_roxburghii	Rroxscaffold_6G00426920 Rroxscaffold_7G00183870 Rroxscaffold_7G00184150
rosa_rugosa	Rorug02G0615000
rosa_samantha	Rh3AG013800 Rh3BG013600 Rh3CG012700 Rh3DG014400 Rh6AG281200 Rh6BG281900 Rh6CG283600 Rh6DG276700
rosa_wichuraiana	Rw3G001020 Rw6G024170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	301
Acc36I	ACCTGC	2 cut(s)	118, 301
AccB1I	GGYRCC	1 cut(s)	737
AccII	CGCG	1 cut(s)	541
AciI	CCGC	3 cut(s)	77, 541, 1512
AclWI	GGATC	1 cut(s)	1551
AcoI	YGGCCR	2 cut(s)	694, 1261
AcsI	RAATTY	4 cut(s)	362, 464, 653, 1403
AcuI	CTGAAG	2 cut(s)	1176, 1320
AfaI	GTAC	9 cut(s)	384, 481, 536, 581, 764, 1120, 1272, 1479, 1498
AfiI	CCNNNNNNNGG	2 cut(s)	20, 1565
AflIII	ACRYGT	1 cut(s)	121
AgsI	TTSAA	7 cut(s)	86, 625, 633, 658, 910, 1316, 1409
AhlI	ACTAGT	1 cut(s)	1076
AjnI	CCWGG	2 cut(s)	472, 1128
AjuI	GAANNNNNNNTTGG	2 cut(s)	255, 287
AleI	CACNNNNGTG	1 cut(s)	162
AluBI	AGCT	6 cut(s)	217, 554, 667, 691, 829, 1103
AluI	AGCT	6 cut(s)	217, 554, 667, 691, 829, 1103
Alw21I	GWGCWC	1 cut(s)	757
Alw26I	GTCTC	3 cut(s)	112, 787, 1314
AlwI	GGATC	1 cut(s)	1551
Ama87I	CYCGRG	1 cut(s)	766
AoxI	GGCC	4 cut(s)	594, 694, 1031, 1261
ApeKI	GCWGC	2 cut(s)	563, 998
ApoI	RAATTY	4 cut(s)	362, 464, 653, 1403
AspLEI	GCGC	1 cut(s)	1526
AspS9I	GGNCC	3 cut(s)	719, 913, 1032
AsuC2I	CCSGG	2 cut(s)	617, 965
AsuHPI	GGTGA	3 cut(s)	788, 1352, 1385
AsuNHI	GCTAGC	1 cut(s)	217
AvaI	CYCGRG	1 cut(s)	766
AvaII	GGWCC	2 cut(s)	719, 913
BaeGI	GKGCMC	1 cut(s)	898
BalI	TGGCCA	2 cut(s)	696, 1263
BanI	GGYRCC	1 cut(s)	737
BarI	GAAGNNNNNNTAC	2 cut(s)	366, 398
BauI	CACGAG	1 cut(s)	587
BbsI	GAAGAC	1 cut(s)	495
Bbv12I	GWGCWC	1 cut(s)	757
BbvI	GCAGC	2 cut(s)	550, 1010
BccI	CCATC	5 cut(s)	408, 727, 730, 1127, 1247
BciT130I	CCWGG	2 cut(s)	474, 1130
BclI	TGATCA	1 cut(s)	1375
BcnI	CCSGG	2 cut(s)	617, 965
BcoDI	GTCTC	3 cut(s)	112, 787, 1314
BcuI	ACTAGT	1 cut(s)	1076
BfaI	CTAG	6 cut(s)	218, 485, 884, 1077, 1116, 1422
BfuAI	ACCTGC	2 cut(s)	118, 301
BglI	GCCNNNNNGGC	1 cut(s)	258
BglII	AGATCT	1 cut(s)	973
BisI	GCNGC	2 cut(s)	564, 999
BlsI	GCNGC	2 cut(s)	565, 1000
BmcAI	AGTACT	4 cut(s)	581, 764, 1120, 1498
Bme1390I	CCNGG	4 cut(s)	474, 617, 965, 1130
Bme18I	GGWCC	2 cut(s)	719, 913
BmeT110I	CYCGRG	1 cut(s)	766
BmgT120I	GGNCC	3 cut(s)	719, 913, 1032
BmiI	GGNNCC	3 cut(s)	739, 915, 1571
BmrFI	CCNGG	4 cut(s)	474, 617, 965, 1130
BmsI	GCATC	2 cut(s)	702, 1031
BmtI	GCTAGC	1 cut(s)	221
BoxI	GACNNNNGTC	1 cut(s)	1272
BpiI	GAAGAC	1 cut(s)	495
BpmI	CTGGAG	3 cut(s)	741, 845, 1542
BpuEI	CTTGAG	1 cut(s)	145
BpuMI	CCSGG	2 cut(s)	617, 965
BsaBI	GATNNNNATC	1 cut(s)	978
BsaJI	CCNNGG	1 cut(s)	473
BsaWI	WCCGGW	1 cut(s)	150
BsaXI	ACNNNNNCTCC	4 cut(s)	375, 405, 1440, 1470
Bsc4I	CCNNNNNNNGG	2 cut(s)	20, 1565
Bse1I	ACTGG	4 cut(s)	778, 828, 841, 1559
Bse3DI	GCAATG	1 cut(s)	1186
Bse8I	GATNNNNATC	1 cut(s)	978
BseBI	CCWGG	2 cut(s)	474, 1130
BseDI	CCNNGG	1 cut(s)	473
BseGI	GGATG	6 cut(s)	400, 679, 802, 1138, 1258, 1532
BseJI	GATNNNNATC	1 cut(s)	978
BseLI	CCNNNNNNNGG	2 cut(s)	20, 1565
BseMI	GCAATG	1 cut(s)	1186
BseMII	CTCAG	3 cut(s)	105, 1257, 1563
BseNI	ACTGG	4 cut(s)	778, 828, 841, 1559
BseSI	GKGCMC	1 cut(s)	898
BseXI	GCAGC	2 cut(s)	550, 1010
BsgI	GTGCAG	1 cut(s)	57
Bsh1236I	CGCG	1 cut(s)	541
Bsh1285I	CGRYCG	1 cut(s)	302
BshFI	GGCC	4 cut(s)	596, 696, 1033, 1263
BshNI	GGYRCC	1 cut(s)	737
BsiEI	CGRYCG	1 cut(s)	302
BsiHKAI	GWGCWC	1 cut(s)	757
BsiHKCI	CYCGRG	1 cut(s)	766
BsiSI	CCGG	5 cut(s)	151, 616, 702, 965, 1030
BsiWI	CGTACG	1 cut(s)	1270
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	2 cut(s)	20, 1565
BsmAI	GTCTC	3 cut(s)	112, 787, 1314
BsmBI	CGTCTC	1 cut(s)	1314
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	2 cut(s)	351, 1306
BsnI	GGCC	4 cut(s)	596, 696, 1033, 1263
BsoBI	CYCGRG	1 cut(s)	766
Bsp1286I	GDGCHC	2 cut(s)	757, 898
Bsp143I	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
BspACI	CCGC	3 cut(s)	77, 541, 1512
BspANI	GGCC	4 cut(s)	596, 696, 1033, 1263
BspCNI	CTCAG	3 cut(s)	106, 1256, 1562
BspFNI	CGCG	1 cut(s)	541
BspHI	TCATGA	2 cut(s)	460, 1038
BspLI	GGNNCC	3 cut(s)	739, 915, 1571
BspMI	ACCTGC	2 cut(s)	118, 301
BspOI	GCTAGC	1 cut(s)	221
BspPI	GGATC	1 cut(s)	1551
BspQI	GCTCTTC	1 cut(s)	838
BspT107I	GGYRCC	1 cut(s)	737
BsrDI	GCAATG	1 cut(s)	1186
BsrI	ACTGG	4 cut(s)	778, 828, 841, 1559
BssECI	CCNNGG	1 cut(s)	473
BssMI	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
BssSI	CACGAG	1 cut(s)	587
Bst2BI	CACGAG	1 cut(s)	587
Bst2UI	CCWGG	2 cut(s)	474, 1130
Bst4CI	ACNGT	2 cut(s)	1433, 1501
Bst6I	CTCTTC	4 cut(s)	271, 300, 838, 1485
BstC8I	GCNNGC	1 cut(s)	219
BstDEI	CTNAG	5 cut(s)	114, 386, 1243, 1280, 1549
BstF5I	GGATG	6 cut(s)	400, 679, 802, 1138, 1258, 1532
BstFNI	CGCG	1 cut(s)	541
BstHHI	GCGC	1 cut(s)	1526
BstKTI	GATC	6 cut(s)	44, 64, 445, 976, 1378, 1546
BstMAI	GTCTC	3 cut(s)	112, 787, 1314
BstMBI	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
BstMCI	CGRYCG	1 cut(s)	302
BstMWI	GCNNNNNNNGC	3 cut(s)	258, 560, 998
BstNI	CCWGG	2 cut(s)	474, 1130
BstNSI	RCATGY	1 cut(s)	125
BstPAI	GACNNNNGTC	1 cut(s)	1272
BstSCI	CCNGG	4 cut(s)	472, 615, 963, 1128
BstSLI	GKGCMC	1 cut(s)	898
BstUI	CGCG	1 cut(s)	541
BstV1I	GCAGC	2 cut(s)	550, 1010
BstV2I	GAAGAC	1 cut(s)	495
BstX2I	RGATCY	2 cut(s)	973, 1543
BstYI	RGATCY	2 cut(s)	973, 1543
BsuRI	GGCC	4 cut(s)	596, 696, 1033, 1263
BtsCI	GGATG	6 cut(s)	400, 679, 802, 1138, 1258, 1532
BtsIMutI	CAGTG	1 cut(s)	1438
BveI	ACCTGC	2 cut(s)	118, 301
Cac8I	GCNNGC	1 cut(s)	219
CciI	TCATGA	2 cut(s)	460, 1038
CfoI	GCGC	1 cut(s)	1526
Cfr13I	GGNCC	3 cut(s)	719, 913, 1032
Csp6I	GTAC	9 cut(s)	383, 480, 535, 580, 763, 1119, 1271, 1478, 1497
CviAII	CATG	8 cut(s)	65, 122, 350, 461, 716, 1003, 1039, 1235
CviQI	GTAC	9 cut(s)	383, 480, 535, 580, 763, 1119, 1271, 1478, 1497
DdeI	CTNAG	5 cut(s)	114, 386, 1243, 1280, 1549
DpnI	GATC	6 cut(s)	43, 63, 444, 975, 1377, 1545
DpnII	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
EaeI	YGGCCR	2 cut(s)	694, 1261
Eam1104I	CTCTTC	4 cut(s)	271, 300, 838, 1485
EarI	CTCTTC	4 cut(s)	271, 300, 838, 1485
EciI	GGCGGA	1 cut(s)	1527
Eco47I	GGWCC	2 cut(s)	719, 913
Eco57I	CTGAAG	2 cut(s)	1176, 1320
Eco88I	CYCGRG	1 cut(s)	766
EcoO109I	RGGNCCY	1 cut(s)	913
EcoRI	GAATTC	2 cut(s)	464, 653
EcoRII	CCWGG	2 cut(s)	472, 1128
EcoT22I	ATGCAT	2 cut(s)	351, 717
Esp3I	CGTCTC	1 cut(s)	1314
FaeI	CATG	8 cut(s)	68, 125, 353, 464, 719, 1006, 1042, 1238
FalI	AAGNNNNNCTT	2 cut(s)	1402, 1434
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	8 cut(s)	64, 121, 349, 460, 715, 1002, 1038, 1234
FbaI	TGATCA	1 cut(s)	1375
Fnu4HI	GCNGC	2 cut(s)	564, 999
FokI	GGATG	6 cut(s)	387, 686, 809, 1145, 1265, 1519
Fsp4HI	GCNGC	2 cut(s)	564, 999
FspBI	CTAG	6 cut(s)	218, 485, 884, 1077, 1116, 1422
GlaI	GCGC	1 cut(s)	1525
GluI	GCNGC	2 cut(s)	564, 999
GsuI	CTGGAG	3 cut(s)	741, 845, 1542
HaeIII	GGCC	4 cut(s)	596, 696, 1033, 1263
HapII	CCGG	5 cut(s)	151, 616, 702, 965, 1030
HhaI	GCGC	1 cut(s)	1526
Hin1II	CATG	8 cut(s)	68, 125, 353, 464, 719, 1006, 1042, 1238
Hin6I	GCGC	1 cut(s)	1524
HinP1I	GCGC	1 cut(s)	1524
HincII	GTYRAC	2 cut(s)	175, 1277
HindII	GTYRAC	2 cut(s)	175, 1277
HindIII	AAGCTT	1 cut(s)	689
HinfI	GANTC	6 cut(s)	179, 279, 1292, 1439, 1529, 1576
HpaII	CCGG	5 cut(s)	151, 616, 702, 965, 1030
HphI	GGTGA	3 cut(s)	788, 1352, 1385
Hpy166II	GTNNAC	3 cut(s)	175, 537, 1277
Hpy8I	GTNNAC	3 cut(s)	175, 537, 1277
Hpy99I	CGWCG	1 cut(s)	440
HpyAV	CCTTC	5 cut(s)	257, 263, 586, 1045, 1445
HpyCH4III	ACNGT	2 cut(s)	1433, 1501
HpyCH4IV	ACGT	4 cut(s)	1047, 1269, 1273, 1323
HpyCH4V	TGCA	7 cut(s)	74, 194, 349, 586, 715, 992, 1012
HpyF10VI	GCNNNNNNNGC	3 cut(s)	258, 560, 998
HpyF3I	CTNAG	5 cut(s)	114, 386, 1243, 1280, 1549
HpySE526I	ACGT	4 cut(s)	1047, 1269, 1273, 1323
Hsp92II	CATG	8 cut(s)	68, 125, 353, 464, 719, 1006, 1042, 1238
HspAI	GCGC	1 cut(s)	1524
Ksp22I	TGATCA	1 cut(s)	1375
Kzo9I	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
LguI	GCTCTTC	1 cut(s)	838
LmnI	GCTCC	4 cut(s)	760, 826, 1090, 1096
Lsp1109I	GCAGC	2 cut(s)	550, 1010
LweI	GCATC	2 cut(s)	702, 1031
MaeI	CTAG	6 cut(s)	218, 485, 884, 1077, 1116, 1422
MaeII	ACGT	4 cut(s)	1047, 1269, 1273, 1323
MaeIII	GTNAC	8 cut(s)	124, 1043, 1051, 1136, 1340, 1364, 1414, 1552
MalI	GATC	6 cut(s)	43, 63, 444, 975, 1377, 1545
MboI	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
MflI	RGATCY	2 cut(s)	973, 1543
MhlI	GDGCHC	2 cut(s)	757, 898
MlsI	TGGCCA	2 cut(s)	696, 1263
MluCI	AATT	8 cut(s)	362, 420, 464, 653, 831, 959, 1403, 1515
MluNI	TGGCCA	2 cut(s)	696, 1263
MlyI	GAGTC	1 cut(s)	288
MmeI	TCCRAC	2 cut(s)	658, 774
MnlI	CCTC	4 cut(s)	79, 401, 1012, 1180
Mox20I	TGGCCA	2 cut(s)	696, 1263
Mph1103I	ATGCAT	2 cut(s)	351, 717
MscI	TGGCCA	2 cut(s)	696, 1263
MseI	TTAA	8 cut(s)	414, 546, 951, 1061, 1224, 1391, 1503, 1518
MslI	CAYNNNNRTG	2 cut(s)	162, 1233
Msp20I	TGGCCA	2 cut(s)	696, 1263
MspA1I	CMGCKG	1 cut(s)	1103
MspI	CCGG	5 cut(s)	151, 616, 702, 965, 1030
MspR9I	CCNGG	4 cut(s)	474, 617, 965, 1130
Mva1269I	GAATGC	2 cut(s)	351, 1306
MvaI	CCWGG	2 cut(s)	474, 1130
MvnI	CGCG	1 cut(s)	541
MwoI	GCNNNNNNNGC	3 cut(s)	258, 560, 998
NciI	CCSGG	2 cut(s)	617, 965
NdeII	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
NheI	GCTAGC	1 cut(s)	217
NlaIII	CATG	8 cut(s)	68, 125, 353, 464, 719, 1006, 1042, 1238
NlaIV	GGNNCC	3 cut(s)	739, 915, 1571
NmuCI	GTSAC	4 cut(s)	124, 1043, 1340, 1552
NsiI	ATGCAT	2 cut(s)	351, 717
NspI	RCATGY	1 cut(s)	125
OliI	CACNNNNGTG	1 cut(s)	162
PaeR7I	CTCGAG	1 cut(s)	766
PagI	TCATGA	2 cut(s)	460, 1038
PaqCI	CACCTGC	1 cut(s)	301
PciI	ACATGT	1 cut(s)	121
PciSI	GCTCTTC	1 cut(s)	838
PctI	GAATGC	2 cut(s)	351, 1306
PfeI	GAWTC	5 cut(s)	179, 1292, 1439, 1529, 1576
Pfl23II	CGTACG	1 cut(s)	1270
PfoI	TCCNGGA	1 cut(s)	963
PkrI	GCNGC	2 cut(s)	565, 1000
PleI	GAGTC	1 cut(s)	287
PpsI	GAGTC	1 cut(s)	287
PpuMI	RGGWCCY	1 cut(s)	913
PscI	ACATGT	1 cut(s)	121
PshAI	GACNNNNGTC	1 cut(s)	1272
Psp5II	RGGWCCY	1 cut(s)	913
Psp6I	CCWGG	2 cut(s)	472, 1128
PspGI	CCWGG	2 cut(s)	472, 1128
PspLI	CGTACG	1 cut(s)	1270
PspN4I	GGNNCC	3 cut(s)	739, 915, 1571
PspPI	GGNCC	3 cut(s)	719, 913, 1032
PspPPI	RGGWCCY	1 cut(s)	913
PsuI	RGATCY	2 cut(s)	973, 1543
PvuII	CAGCTG	1 cut(s)	1103
RsaI	GTAC	9 cut(s)	384, 481, 536, 581, 764, 1120, 1272, 1479, 1498
RsaNI	GTAC	9 cut(s)	383, 480, 535, 580, 763, 1119, 1271, 1478, 1497
RseI	CAYNNNNRTG	2 cut(s)	162, 1233
SapI	GCTCTTC	1 cut(s)	838
SaqAI	TTAA	8 cut(s)	414, 546, 951, 1061, 1224, 1391, 1503, 1518
SatI	GCNGC	2 cut(s)	564, 999
Sau3AI	GATC	6 cut(s)	41, 61, 442, 973, 1375, 1543
Sau96I	GGNCC	3 cut(s)	719, 913, 1032
ScaI	AGTACT	4 cut(s)	581, 764, 1120, 1498
SchI	GAGTC	1 cut(s)	288
ScrFI	CCNGG	4 cut(s)	474, 617, 965, 1130
SduI	GDGCHC	2 cut(s)	757, 898
SfaNI	GCATC	2 cut(s)	702, 1031
Sfr274I	CTCGAG	1 cut(s)	766
SinI	GGWCC	2 cut(s)	719, 913
SlaI	CTCGAG	1 cut(s)	766
SmiMI	CAYNNNNRTG	2 cut(s)	162, 1233
SmlI	CTYRAG	2 cut(s)	160, 766
SmoI	CTYRAG	2 cut(s)	160, 766
SpeI	ACTAGT	1 cut(s)	1076
Sse9I	AATT	8 cut(s)	362, 420, 464, 653, 831, 959, 1403, 1515
SsiI	CCGC	3 cut(s)	77, 541, 1512
SspMI	CTAG	6 cut(s)	218, 485, 884, 1077, 1116, 1422
StyD4I	CCNGG	4 cut(s)	472, 615, 963, 1128
TaaI	ACNGT	2 cut(s)	1433, 1501
TaiI	ACGT	4 cut(s)	1050, 1272, 1276, 1326
TaqI	TCGA	3 cut(s)	302, 767, 1442
TaqII	GACCGA	2 cut(s)	288, 507
TasI	AATT	8 cut(s)	362, 420, 464, 653, 831, 959, 1403, 1515
TatI	WGTACW	4 cut(s)	579, 762, 1118, 1496
TfiI	GAWTC	5 cut(s)	179, 1292, 1439, 1529, 1576
Tru1I	TTAA	8 cut(s)	414, 546, 951, 1061, 1224, 1391, 1503, 1518
Tru9I	TTAA	8 cut(s)	414, 546, 951, 1061, 1224, 1391, 1503, 1518
TscAI	CASTG	1 cut(s)	1438
TseFI	GTSAC	4 cut(s)	124, 1043, 1340, 1552
TseI	GCWGC	2 cut(s)	563, 998
Tsp45I	GTSAC	4 cut(s)	124, 1043, 1340, 1552
TspDTI	ATGAA	8 cut(s)	110, 449, 457, 477, 663, 803, 1027, 1299
TspGWI	ACGGA	4 cut(s)	200, 230, 453, 1461
TspRI	CASTG	1 cut(s)	1438
VpaK11BI	GGWCC	2 cut(s)	719, 913
XapI	RAATTY	4 cut(s)	362, 464, 653, 1403
XbaI	TCTAGA	2 cut(s)	484, 1421
XceI	RCATGY	1 cut(s)	125
XhoI	CTCGAG	1 cut(s)	766
XspI	CTAG	6 cut(s)	218, 485, 884, 1077, 1116, 1422
ZrmI	AGTACT	4 cut(s)	581, 764, 1120, 1498
Zsp2I	ATGCAT	2 cut(s)	351, 717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.