Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0003079

Physical Location & Seq

Genomic Coordinates Forward (+)

860177 .. 863508

Gene Structure 3332 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG014400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGAAAAAACAAAGACCCGCTGAGAGACATGTGACACACTCAACACACTCAACACACCGGACACACTCAAGTGTGGAAGTGGATGAATCACAAATCAATGCAAAGTGTTTCACTTTCCGTGAGCTAGCTACAGCAACAAAGAACTTCCGTCAGGAGTGCCTTCTGGGCGAAGGTGGATTTGGAAGAGTCTATAAGGGAACTCTTCGGTCGAGTGGGCAGGTGGTGGCTGTGAAGCAACTTGACAGAAATGGAATGCATGGACACAAGGAATTTCTCGGAGAAGTTTTGGTACTAAGCCTCCTACACCACCCAAACATAGTTAATCTAATTGGATATTGTGCCGACGGAGATCAAAGGCTTTTGGTTCATGAATTCATACCAGGGGGTACTCTAGAAGACCGAGTTCTTGCTAATCAAACAGGTAAAATGACATTGGATTGGTACACGCGGATTAAAATAGCTTATGGTGCTGCTCTGGGATTGGAGTACTTGCACGAGAAGGCCAATCCACCCATTATATATCGGGACTTCAAATCTTCAAATATCTTATTAGATGAAGAATTCAATCCAAAGCTCTCGGATGTTGGACTTGCCAAGCTTGGCCAAGCCGGAGATAAGATGCATGGACCATCAAGGCTGATGGGTGCCTATGGTTTCTGTGCTCCAGAGTACTCGAGAACTGGTGAAGTCTCAATGAAGTCGGATGTGTATAGTTTTGGAGTTATTCTGCTGGAGCTAATTACTGGAAGAAGAGCCATTGACACTACAAGAGCAAATGATGAGCAAAATCTAGTTGCTTGGGCACAACCCTTATTCAAGGACCCAAAAAAGTTTCCTGAAATGGCAGATAGTCGTCTTAACAAGCAATTCCCTGAGAAAGATCTAAATCAGGCTGTTGCAATAGCTGCCATGTGTCTGCAAGATGAGGCATCAGTCCGGCCCTTCATGAGTGACGTTGTAACGACTTTAAGTTTTCTTCACACTAGTCCTGCTCCTGTTCCAGCTGATACAATCCCTAGTACTGAAAACCAGGATGGTAACTCTGAATGTGGTTCTGATATTTCTGGCGATGATGAGACCAATGGGGAGGCTTCAGATAATGAGATTATCAGAAGTTCAGACATTAACCACAGCCATGACAACTCAGATAAGGATGGCAATGGCCAAGACTTACGTCAATTAAGTGGTGTAGAATCCAAAGAATGGCATTCATTTGAACGAGACGTAGGCGTTTCTTCAGGTGACGAGAGAAGTAAAAGCAAGAGCAACAAGGGTGATCATGATACTAGTTTAAGCCAAGATAAATTTGAAAGTGTTACTTCTAGAAGCAACAGTGAAGAATCGAACGGAGAAGGTGTTTCTCATAGCAACAATAGAGTACCACAAAAAGAAGAGAGTACTGTTAAAGTTGGCGGAATTAAGAGCGCAGAATCATCCGAAGTGGACCTCTCAGTCACTCCAGTCGTAGGGAACCTGAATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0038023 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051286 GO:0051704 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

494

Amino Acids

54.28

Weight (kDa)

5.43

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	51 - 320	2.1e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	52 - 323	5.2e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07070 AT3G24790 AT3G24790 AT4G13190 AT4G13190 AT4G13190 AT4G13190 AT4G13190
fragaria_vesca	FvH4_2g19200 FvH4_6g01120
malus_domestica	MD04G1236200.v1.1 MD05G1176700.v1.1 MD10G1165400.v1.1 MD12G1255300.v1.1
prunus_persica	Prupe.6G356200_v2.0.a1 Prupe.8G203800_v2.0.a1
pyrus_communis	pycom05g16290 pycom12g23400
rosa_chinensis	RchiOBHm_Chr3g0448651 RchiOBHm_Chr6g0284981
rosa_laevigata	RLG00000012693 RLG00000025882
rosa_multiflora	Rmu_sc0003116.1_g000035
rosa_roxburghii	Rroxscaffold_6G00426920 Rroxscaffold_7G00183870 Rroxscaffold_7G00184150
rosa_rugosa	Rorug02G0615000
rosa_samantha	Rh3AG013800 Rh3BG013600 Rh3CG012700 Rh3DG014400 Rh6AG281200 Rh6BG281900 Rh6CG283600 Rh6DG276700
rosa_wichuraiana	Rw3G001020 Rw6G024170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	208
AasI	GACNNNNNNGTC	1 cut(s)	1451
Acc36I	ACCTGC	1 cut(s)	208
AccB1I	GGYRCC	1 cut(s)	644
AccB7I	CCANNNNNTGG	1 cut(s)	1203
AccII	CGCG	1 cut(s)	448
AciI	CCGC	3 cut(s)	18, 448, 1413
AcoI	YGGCCR	2 cut(s)	601, 1162
AcsI	RAATTY	4 cut(s)	269, 371, 560, 1304
AcuI	CTGAAG	2 cut(s)	1077, 1221
AfaI	GTAC	8 cut(s)	291, 388, 443, 488, 671, 1021, 1380, 1399
AfiI	CCNNNNNNNGG	2 cut(s)	1203, 1466
AflIII	ACRYGT	1 cut(s)	28
AgsI	TTSAA	6 cut(s)	532, 540, 565, 817, 1217, 1310
AhlI	ACTAGT	2 cut(s)	983, 1286
AjnI	CCWGG	2 cut(s)	379, 1029
AjuI	GAANNNNNNNTTGG	2 cut(s)	162, 194
AleI	CACNNNNGTG	1 cut(s)	69
AluBI	AGCT	8 cut(s)	124, 128, 461, 574, 598, 736, 905, 1004
AluI	AGCT	8 cut(s)	124, 128, 461, 574, 598, 736, 905, 1004
Alw21I	GWGCWC	1 cut(s)	664
Alw26I	GTCTC	4 cut(s)	19, 694, 1070, 1215
Ama87I	CYCGRG	1 cut(s)	673
AoxI	GGCC	4 cut(s)	501, 601, 938, 1162
ApeKI	GCWGC	2 cut(s)	470, 905
ApoI	RAATTY	4 cut(s)	269, 371, 560, 1304
AspLEI	GCGC	1 cut(s)	1427
AspS9I	GGNCC	4 cut(s)	626, 820, 939, 1444
AsuHPI	GGTGA	3 cut(s)	695, 1253, 1286
AsuNHI	GCTAGC	1 cut(s)	124
AvaI	CYCGRG	1 cut(s)	673
AvaII	GGWCC	3 cut(s)	626, 820, 1444
BaeGI	GKGCMC	1 cut(s)	805
BalI	TGGCCA	2 cut(s)	603, 1164
BanI	GGYRCC	1 cut(s)	644
BarI	GAAGNNNNNNTAC	2 cut(s)	273, 305
BauI	CACGAG	1 cut(s)	494
BbsI	GAAGAC	1 cut(s)	402
Bbv12I	GWGCWC	1 cut(s)	664
BbvI	GCAGC	2 cut(s)	457, 892
BccI	CCATC	4 cut(s)	634, 637, 1028, 1148
BciT130I	CCWGG	2 cut(s)	381, 1031
BclI	TGATCA	1 cut(s)	1276
BcoDI	GTCTC	4 cut(s)	19, 694, 1070, 1215
BcuI	ACTAGT	2 cut(s)	983, 1286
BfaI	CTAG	7 cut(s)	125, 392, 791, 984, 1017, 1287, 1323
BfmI	CTRYAG	1 cut(s)	129
BfuAI	ACCTGC	1 cut(s)	208
BglI	GCCNNNNNGGC	1 cut(s)	165
BglII	AGATCT	1 cut(s)	880
BisI	GCNGC	2 cut(s)	471, 906
BlsI	GCNGC	2 cut(s)	472, 907
BmcAI	AGTACT	4 cut(s)	488, 671, 1021, 1399
Bme1390I	CCNGG	2 cut(s)	381, 1031
Bme18I	GGWCC	3 cut(s)	626, 820, 1444
BmeT110I	CYCGRG	1 cut(s)	673
BmgT120I	GGNCC	4 cut(s)	626, 820, 939, 1444
BmiI	GGNNCC	3 cut(s)	646, 822, 1472
BmrFI	CCNGG	2 cut(s)	381, 1031
BmsI	GCATC	2 cut(s)	609, 938
BmtI	GCTAGC	1 cut(s)	128
BoxI	GACNNNNGTC	1 cut(s)	1173
BpiI	GAAGAC	1 cut(s)	402
BpmI	CTGGAG	3 cut(s)	648, 752, 1443
BpuEI	CTTGAG	1 cut(s)	52
BsaBI	GATNNNNATC	1 cut(s)	885
BsaI	GGTCTC	1 cut(s)	1070
BsaJI	CCNNGG	1 cut(s)	380
BsaWI	WCCGGW	1 cut(s)	57
BsaXI	ACNNNNNCTCC	4 cut(s)	282, 312, 1341, 1371
Bsc4I	CCNNNNNNNGG	2 cut(s)	1203, 1466
Bse1I	ACTGG	3 cut(s)	685, 748, 1460
Bse3DI	GCAATG	1 cut(s)	1165
Bse8I	GATNNNNATC	1 cut(s)	885
BseBI	CCWGG	2 cut(s)	381, 1031
BseDI	CCNNGG	1 cut(s)	380
BseGI	GGATG	6 cut(s)	88, 586, 709, 1039, 1159, 1433
BseJI	GATNNNNATC	1 cut(s)	885
BseLI	CCNNNNNNNGG	2 cut(s)	1203, 1466
BseMI	GCAATG	1 cut(s)	1165
BseMII	CTCAG	4 cut(s)	12, 864, 1158, 1464
BseNI	ACTGG	3 cut(s)	685, 748, 1460
BseSI	GKGCMC	1 cut(s)	805
BseXI	GCAGC	2 cut(s)	457, 892
Bsh1236I	CGCG	1 cut(s)	448
Bsh1285I	CGRYCG	1 cut(s)	209
BshFI	GGCC	4 cut(s)	503, 603, 940, 1164
BshNI	GGYRCC	1 cut(s)	644
BsiEI	CGRYCG	1 cut(s)	209
BsiHKAI	GWGCWC	1 cut(s)	664
BsiHKCI	CYCGRG	1 cut(s)	673
BsiSI	CCGG	3 cut(s)	58, 609, 937
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	2 cut(s)	1203, 1466
BsmAI	GTCTC	4 cut(s)	19, 694, 1070, 1215
BsmBI	CGTCTC	1 cut(s)	1215
BsmFI	GGGAC	1 cut(s)	539
BsmI	GAATGC	2 cut(s)	258, 1207
BsnI	GGCC	4 cut(s)	503, 603, 940, 1164
Bso31I	GGTCTC	1 cut(s)	1070
BsoBI	CYCGRG	1 cut(s)	673
Bsp1286I	GDGCHC	2 cut(s)	664, 805
Bsp143I	GATC	3 cut(s)	349, 880, 1276
BspACI	CCGC	3 cut(s)	18, 448, 1413
BspANI	GGCC	4 cut(s)	503, 603, 940, 1164
BspCNI	CTCAG	4 cut(s)	13, 865, 1157, 1463
BspFNI	CGCG	1 cut(s)	448
BspHI	TCATGA	3 cut(s)	367, 945, 1279
BspLI	GGNNCC	3 cut(s)	646, 822, 1472
BspMI	ACCTGC	1 cut(s)	208
BspOI	GCTAGC	1 cut(s)	128
BspQI	GCTCTTC	1 cut(s)	745
BspT107I	GGYRCC	1 cut(s)	644
BspTNI	GGTCTC	1 cut(s)	1070
BsrDI	GCAATG	1 cut(s)	1165
BsrI	ACTGG	3 cut(s)	685, 748, 1460
BssECI	CCNNGG	1 cut(s)	380
BssMI	GATC	3 cut(s)	349, 880, 1276
BssSI	CACGAG	1 cut(s)	494
Bst2BI	CACGAG	1 cut(s)	494
Bst2UI	CCWGG	2 cut(s)	381, 1031
Bst4CI	ACNGT	2 cut(s)	1334, 1402
Bst6I	CTCTTC	4 cut(s)	178, 207, 745, 1386
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstC8I	GCNNGC	1 cut(s)	126
BstDEI	CTNAG	5 cut(s)	21, 293, 873, 1144, 1450
BstF5I	GGATG	6 cut(s)	88, 586, 709, 1039, 1159, 1433
BstFNI	CGCG	1 cut(s)	448
BstHHI	GCGC	1 cut(s)	1427
BstKTI	GATC	3 cut(s)	352, 883, 1279
BstMAI	GTCTC	4 cut(s)	19, 694, 1070, 1215
BstMBI	GATC	3 cut(s)	349, 880, 1276
BstMCI	CGRYCG	1 cut(s)	209
BstMWI	GCNNNNNNNGC	3 cut(s)	165, 467, 905
BstNI	CCWGG	2 cut(s)	381, 1031
BstNSI	RCATGY	1 cut(s)	32
BstPAI	GACNNNNGTC	1 cut(s)	1173
BstSCI	CCNGG	2 cut(s)	379, 1029
BstSFI	CTRYAG	1 cut(s)	129
BstSLI	GKGCMC	1 cut(s)	805
BstUI	CGCG	1 cut(s)	448
BstV1I	GCAGC	2 cut(s)	457, 892
BstV2I	GAAGAC	1 cut(s)	402
BstX2I	RGATCY	1 cut(s)	880
BstYI	RGATCY	1 cut(s)	880
BsuRI	GGCC	4 cut(s)	503, 603, 940, 1164
BtgZI	GCGATG	1 cut(s)	1083
BtsCI	GGATG	6 cut(s)	88, 586, 709, 1039, 1159, 1433
BtsIMutI	CAGTG	1 cut(s)	1339
BveI	ACCTGC	1 cut(s)	208
Cac8I	GCNNGC	1 cut(s)	126
CciI	TCATGA	3 cut(s)	367, 945, 1279
CfoI	GCGC	1 cut(s)	1427
Cfr13I	GGNCC	4 cut(s)	626, 820, 939, 1444
Csp6I	GTAC	8 cut(s)	290, 387, 442, 487, 670, 1020, 1379, 1398
CviAII	CATG	8 cut(s)	29, 257, 368, 623, 910, 946, 1136, 1280
CviQI	GTAC	8 cut(s)	290, 387, 442, 487, 670, 1020, 1379, 1398
DdeI	CTNAG	5 cut(s)	21, 293, 873, 1144, 1450
DpnI	GATC	3 cut(s)	351, 882, 1278
DpnII	GATC	3 cut(s)	349, 880, 1276
DrdI	GACNNNNNNGTC	1 cut(s)	1451
DseDI	GACNNNNNNGTC	1 cut(s)	1451
EaeI	YGGCCR	2 cut(s)	601, 1162
Eam1104I	CTCTTC	4 cut(s)	178, 207, 745, 1386
EarI	CTCTTC	4 cut(s)	178, 207, 745, 1386
EciI	GGCGGA	1 cut(s)	1428
Eco31I	GGTCTC	1 cut(s)	1070
Eco47I	GGWCC	3 cut(s)	626, 820, 1444
Eco57I	CTGAAG	2 cut(s)	1077, 1221
Eco88I	CYCGRG	1 cut(s)	673
EcoO109I	RGGNCCY	1 cut(s)	820
EcoRI	GAATTC	2 cut(s)	371, 560
EcoRII	CCWGG	2 cut(s)	379, 1029
EcoT22I	ATGCAT	2 cut(s)	258, 624
Esp3I	CGTCTC	1 cut(s)	1215
FaeI	CATG	8 cut(s)	32, 260, 371, 626, 913, 949, 1139, 1283
FalI	AAGNNNNNCTT	2 cut(s)	1303, 1335
FaqI	GGGAC	1 cut(s)	539
FatI	CATG	8 cut(s)	28, 256, 367, 622, 909, 945, 1135, 1279
FauI	CCCGC	1 cut(s)	25
FbaI	TGATCA	1 cut(s)	1276
Fnu4HI	GCNGC	2 cut(s)	471, 906
FokI	GGATG	6 cut(s)	95, 593, 716, 1046, 1166, 1420
Fsp4HI	GCNGC	2 cut(s)	471, 906
FspBI	CTAG	7 cut(s)	125, 392, 791, 984, 1017, 1287, 1323
GlaI	GCGC	1 cut(s)	1426
GluI	GCNGC	2 cut(s)	471, 906
GsuI	CTGGAG	3 cut(s)	648, 752, 1443
HaeIII	GGCC	4 cut(s)	503, 603, 940, 1164
HapII	CCGG	3 cut(s)	58, 609, 937
HhaI	GCGC	1 cut(s)	1427
Hin1II	CATG	8 cut(s)	32, 260, 371, 626, 913, 949, 1139, 1283
Hin6I	GCGC	1 cut(s)	1425
HinP1I	GCGC	1 cut(s)	1425
HindIII	AAGCTT	1 cut(s)	596
HinfI	GANTC	6 cut(s)	86, 186, 1193, 1340, 1430, 1477
HpaII	CCGG	3 cut(s)	58, 609, 937
HphI	GGTGA	3 cut(s)	695, 1253, 1286
Hpy166II	GTNNAC	2 cut(s)	444, 1444
Hpy8I	GTNNAC	2 cut(s)	444, 1444
Hpy99I	CGWCG	1 cut(s)	347
HpyAV	CCTTC	5 cut(s)	164, 170, 493, 952, 1346
HpyCH4III	ACNGT	2 cut(s)	1334, 1402
HpyCH4IV	ACGT	3 cut(s)	954, 1174, 1224
HpyCH4V	TGCA	6 cut(s)	101, 256, 493, 622, 899, 919
HpyF10VI	GCNNNNNNNGC	3 cut(s)	165, 467, 905
HpyF3I	CTNAG	5 cut(s)	21, 293, 873, 1144, 1450
HpySE526I	ACGT	3 cut(s)	954, 1174, 1224
Hsp92II	CATG	8 cut(s)	32, 260, 371, 626, 913, 949, 1139, 1283
HspAI	GCGC	1 cut(s)	1425
Ksp22I	TGATCA	1 cut(s)	1276
Kzo9I	GATC	3 cut(s)	349, 880, 1276
LguI	GCTCTTC	1 cut(s)	745
LmnI	GCTCC	3 cut(s)	667, 733, 997
Lsp1109I	GCAGC	2 cut(s)	457, 892
LweI	GCATC	2 cut(s)	609, 938
MaeI	CTAG	7 cut(s)	125, 392, 791, 984, 1017, 1287, 1323
MaeII	ACGT	3 cut(s)	954, 1174, 1224
MaeIII	GTNAC	7 cut(s)	31, 950, 958, 1037, 1241, 1315, 1453
MalI	GATC	3 cut(s)	351, 882, 1278
MboI	GATC	3 cut(s)	349, 880, 1276
MflI	RGATCY	1 cut(s)	880
MhlI	GDGCHC	2 cut(s)	664, 805
MlsI	TGGCCA	2 cut(s)	603, 1164
MluCI	AATT	9 cut(s)	269, 327, 371, 560, 738, 866, 1178, 1304, 1416
MluNI	TGGCCA	2 cut(s)	603, 1164
MlyI	GAGTC	1 cut(s)	195
MmeI	TCCRAC	2 cut(s)	565, 681
MnlI	CCTC	4 cut(s)	308, 919, 1081, 1457
Mox20I	TGGCCA	2 cut(s)	603, 1164
Mph1103I	ATGCAT	2 cut(s)	258, 624
MscI	TGGCCA	2 cut(s)	603, 1164
MseI	TTAA	9 cut(s)	321, 453, 858, 968, 1125, 1181, 1292, 1404, 1419
MslI	CAYNNNNRTG	2 cut(s)	69, 1134
Msp20I	TGGCCA	2 cut(s)	603, 1164
MspA1I	CMGCKG	2 cut(s)	20, 1004
MspI	CCGG	3 cut(s)	58, 609, 937
MspR9I	CCNGG	2 cut(s)	381, 1031
Mva1269I	GAATGC	2 cut(s)	258, 1207
MvaI	CCWGG	2 cut(s)	381, 1031
MvnI	CGCG	1 cut(s)	448
MwoI	GCNNNNNNNGC	3 cut(s)	165, 467, 905
NdeII	GATC	3 cut(s)	349, 880, 1276
NheI	GCTAGC	1 cut(s)	124
NlaIII	CATG	8 cut(s)	32, 260, 371, 626, 913, 949, 1139, 1283
NlaIV	GGNNCC	3 cut(s)	646, 822, 1472
NmuCI	GTSAC	4 cut(s)	31, 950, 1241, 1453
NsiI	ATGCAT	2 cut(s)	258, 624
NspI	RCATGY	1 cut(s)	32
OliI	CACNNNNGTG	1 cut(s)	69
PaeR7I	CTCGAG	1 cut(s)	673
PagI	TCATGA	3 cut(s)	367, 945, 1279
PaqCI	CACCTGC	1 cut(s)	208
PciI	ACATGT	1 cut(s)	28
PciSI	GCTCTTC	1 cut(s)	745
PctI	GAATGC	2 cut(s)	258, 1207
PfeI	GAWTC	5 cut(s)	86, 1193, 1340, 1430, 1477
PflMI	CCANNNNNTGG	1 cut(s)	1203
PkrI	GCNGC	2 cut(s)	472, 907
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
PpuMI	RGGWCCY	1 cut(s)	820
PscI	ACATGT	1 cut(s)	28
PshAI	GACNNNNGTC	1 cut(s)	1173
Psp5II	RGGWCCY	1 cut(s)	820
Psp6I	CCWGG	2 cut(s)	379, 1029
PspGI	CCWGG	2 cut(s)	379, 1029
PspN4I	GGNNCC	3 cut(s)	646, 822, 1472
PspPI	GGNCC	4 cut(s)	626, 820, 939, 1444
PspPPI	RGGWCCY	1 cut(s)	820
PsuI	RGATCY	1 cut(s)	880
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	8 cut(s)	291, 388, 443, 488, 671, 1021, 1380, 1399
RsaNI	GTAC	8 cut(s)	290, 387, 442, 487, 670, 1020, 1379, 1398
RseI	CAYNNNNRTG	2 cut(s)	69, 1134
SapI	GCTCTTC	1 cut(s)	745
SaqAI	TTAA	9 cut(s)	321, 453, 858, 968, 1125, 1181, 1292, 1404, 1419
SatI	GCNGC	2 cut(s)	471, 906
Sau3AI	GATC	3 cut(s)	349, 880, 1276
Sau96I	GGNCC	4 cut(s)	626, 820, 939, 1444
ScaI	AGTACT	4 cut(s)	488, 671, 1021, 1399
SchI	GAGTC	1 cut(s)	195
ScrFI	CCNGG	2 cut(s)	381, 1031
SduI	GDGCHC	2 cut(s)	664, 805
SfaNI	GCATC	2 cut(s)	609, 938
SfcI	CTRYAG	1 cut(s)	129
Sfr274I	CTCGAG	1 cut(s)	673
SinI	GGWCC	3 cut(s)	626, 820, 1444
SlaI	CTCGAG	1 cut(s)	673
SmiMI	CAYNNNNRTG	2 cut(s)	69, 1134
SmlI	CTYRAG	2 cut(s)	67, 673
SmoI	CTYRAG	2 cut(s)	67, 673
SpeI	ACTAGT	2 cut(s)	983, 1286
Sse9I	AATT	9 cut(s)	269, 327, 371, 560, 738, 866, 1178, 1304, 1416
SsiI	CCGC	3 cut(s)	18, 448, 1413
SspMI	CTAG	7 cut(s)	125, 392, 791, 984, 1017, 1287, 1323
StyD4I	CCNGG	2 cut(s)	379, 1029
TaaI	ACNGT	2 cut(s)	1334, 1402
TaiI	ACGT	3 cut(s)	957, 1177, 1227
TaqI	TCGA	3 cut(s)	209, 674, 1343
TaqII	GACCGA	2 cut(s)	195, 414
TasI	AATT	9 cut(s)	269, 327, 371, 560, 738, 866, 1178, 1304, 1416
TatI	WGTACW	4 cut(s)	486, 669, 1019, 1397
TfiI	GAWTC	5 cut(s)	86, 1193, 1340, 1430, 1477
Tru1I	TTAA	9 cut(s)	321, 453, 858, 968, 1125, 1181, 1292, 1404, 1419
Tru9I	TTAA	9 cut(s)	321, 453, 858, 968, 1125, 1181, 1292, 1404, 1419
TscAI	CASTG	1 cut(s)	1339
TseFI	GTSAC	4 cut(s)	31, 950, 1241, 1453
TseI	GCWGC	2 cut(s)	470, 905
Tsp45I	GTSAC	4 cut(s)	31, 950, 1241, 1453
TspDTI	ATGAA	9 cut(s)	17, 99, 356, 364, 384, 570, 710, 934, 1200
TspGWI	ACGGA	4 cut(s)	107, 137, 360, 1362
TspRI	CASTG	1 cut(s)	1339
Van91I	CCANNNNNTGG	1 cut(s)	1203
VpaK11BI	GGWCC	3 cut(s)	626, 820, 1444
XapI	RAATTY	4 cut(s)	269, 371, 560, 1304
XbaI	TCTAGA	2 cut(s)	391, 1322
XceI	RCATGY	1 cut(s)	32
XhoI	CTCGAG	1 cut(s)	673
XspI	CTAG	7 cut(s)	125, 392, 791, 984, 1017, 1287, 1323
ZrmI	AGTACT	4 cut(s)	488, 671, 1021, 1399
Zsp2I	ATGCAT	2 cut(s)	258, 624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.