Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003079

Physical Location & Seq

Genomic Coordinates Forward (+)

73263788 .. 73267018

Gene Structure 3231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0615000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGCCTGGATTAGCTATGGATGAAGGGAATGGGAATGGTGTAGTAGATGAGCAGAGTGGAGAGTATACACCTCACAAGGAAGGCTATAACCAGCAAGGCTCTCCGAGAAGTCCATTGAGTCCTCAAAGTCCTCATAGTGACTCCATTGGTATGCCTATGGATGGCCGGATTGACACCTCGATTGAGCAGCTGTATCACAATGTATGTGAAATGCAGAGCTCTGATCAATCTCCATCCAGGGCTAGTTTTGGATCGTTTGGAGCTGAGTCGAGGATTGATTCAGAGTTGAATCATCTTGTTGGGTATGTTCATCGAGATGTGGAGGTAAGGAAAGAGGTTGTTGTAGAAACCAGAGAGGATAGTACTTCAACTCCTGAAAAAGAAAATGTGTCTGTGGGAACAAAGGTGAAGATGCAATCTCCTAAGTTCAGTCCTAGGAGCAAATCTCCCAATCAGAGGCCTCCCCTTGACAAGAGGAGTCCAAGAAATGCAAGTTCAGTGATGTCGAAGAACAAGCTGAGAAGTTTAGCTTTACGAGGGATGAAGCTTCAGAATGGAGTCGAGGATCCCTCTGTGGAGGGATTGGATAGCCCTGATCTTGGACCCTTCTTGCTTAAGCAAGCAAGGGATATGATTTCTGCTGGTGAAAGTCCCCGGAAGGCGCTTGAGTTGGCTCGTCGGGCAGTGAAATCATTTGAGAAATGTACAACCGAGAAACCCAGTTTAGAGTTGGTCATGTGTTTGCATGTTTTGGCATCAATCCATTGCAGCTTAGGCCAGTACAATGAGGCAATTCCAGTTCTTGAGCGCGCCATTGATATTCCAGCTATAGAGGATGGCCATGACCACGCACTAGCCAAGTTTGCAGGGTGCATGCAATTGGGTGACATTTATGCAATGACCGGTCAGATTGAGAATTCAATACTGTTCTACACAGCAGGTATGGAGATACAAAGGCAAGTCTTGGGAGAAACAGACCCTCGATTTGGTGAGACATGTCGATATGTAGCTGAGGCTCATGTCCAAGCATTGCAGTTTGATGAGGCTGAGAAGCTGTGTCTAATGGCCCTTGAAATCCACAGAGAGAATGGTTCTCTTGCTTCACTAGAGGAGGCGGCAGATAGAAGACTCATGGGACTTATCTGTGACTCAAAAGGAGATTATGAATCTGCTCTTGAGCATTATGTTTTAGCAGGCATGTCCATGTCTGCCAATGGCCACGAAACAGATGCAGCTTCAATTGATTGCAGTATTGGAGATGCTTATCTGGCCTTGGCTCGGTATGATGAGGCAGTCTTTGCTTTCCAGAAAGCACTGACTGTGTTTAAGACCACTAAAGGAGAGACACATCCAGCAGTAGCTTCTGTTTATGTCCGGTTAGCTGATCTTTACAACAAGATAGGGAAGTTTAAGGAGTCCAAGTCATACTGTGAAAATGCACATAAAATCTACGGGAAGCCAAATCCTGGAATCACTGCAGAAGAGATTGCTAGCGGTCTTATTGATGTTTCTGCTATCTATCAATCTATGAATGATTTGGAGCAGGCCCTCAAGTTACTCAAGAAGGCTTTGAAGATGTTTGGTGATTCCCCAGGTCAACAAAGTACAATTGCAGGAATTGAGGCTCAGATGGGGGTCATGTATTATATGATGGGAAATTACTCAGACTCCTACAACACCTTCAAGAGTTCCACAACCAAGTTCAGGGCCAGTGGAGAGAAAAAATCAGCCTTGTTTGGGATTGCTCTGAACCAAATGGGTCTAGCCTGTGTGCAGTGCTATTCAATAAACGAGGCTGCAGACCTGTTTGAAGAAGCCAGGAATATCTTAGAGAAGGAATACGGGCCATATCACCCTGATACATTGGGCGTGTATAGTAATTTGGCTGGCACATATGATGCAATGGGCAGGTTGGATGATGCCATTGAAATTTTGGAATATGTTGTTGGGATGAGAGAAGAGAAGCTTGGAACGGCAAATCCTGATGTGGCCGATGAGAAGCGGAGGTTGGCTGTGTTATTGAAAGAAGCAGGCAGGGTGAGGAGCAGGAAACCAAGATCACTAGAGACACTTCTCGACACTGCCAACCCCCAAATTAGAAGAAGTGACATTATTGAGGTACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0038023 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051286 GO:0051704 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

708

Amino Acids

77.88

Weight (kDa)

5.33

Isoelectric Point (pI)

51.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	336 - 395	7.9e-06	Tetratricopeptide repeat
TPR_MalT	PF17874	378 - 523	2.3e-07	MalT-like TPR region
TPR_NPHP3	PF24885	409 - 531	1.6e-09	Nephrocystin-3 TPR domain
TPR_12	PF13424	411 - 473	4.3e-09	Tetratricopeptide repeat
TPR_12	PF13424	454 - 527	1e-09	Tetratricopeptide repeat
TPR_12	PF13424	582 - 651	8.9e-11	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07070 AT3G24790 AT3G24790 AT4G13190 AT4G13190 AT4G13190 AT4G13190 AT4G13190
fragaria_vesca	FvH4_2g19200 FvH4_6g01120
malus_domestica	MD04G1236200.v1.1 MD05G1176700.v1.1 MD10G1165400.v1.1 MD12G1255300.v1.1
prunus_persica	Prupe.6G356200_v2.0.a1 Prupe.8G203800_v2.0.a1
pyrus_communis	pycom05g16290 pycom12g23400
rosa_chinensis	RchiOBHm_Chr3g0448651 RchiOBHm_Chr6g0284981
rosa_laevigata	RLG00000012693 RLG00000025882
rosa_multiflora	Rmu_sc0003116.1_g000035
rosa_roxburghii	Rroxscaffold_6G00426920 Rroxscaffold_7G00183870 Rroxscaffold_7G00184150
rosa_rugosa	Rorug02G0615000
rosa_samantha	Rh3AG013800 Rh3BG013600 Rh3CG012700 Rh3DG014400 Rh6AG281200 Rh6BG281900 Rh6CG283600 Rh6DG276700
rosa_wichuraiana	Rw3G001020 Rw6G024170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	929, 1899
AccB7I	CCANNNNNTGG	1 cut(s)	1466
AccI	GTMKAC	1 cut(s)	65
AccII	CGCG	1 cut(s)	810
AciI	CCGC	3 cut(s)	1115, 1494, 2002
AclWI	GGATC	3 cut(s)	259, 560, 573
AcoI	YGGCCR	4 cut(s)	163, 838, 1216, 1989
AcsI	RAATTY	2 cut(s)	916, 1929
AcuI	CTGAAG	1 cut(s)	533
AfaI	GTAC	5 cut(s)	364, 706, 782, 1606, 2121
AfiI	CCNNNNNNNGG	8 cut(s)	161, 456, 599, 986, 1278, 1466, 1704, 1737
AflII	CTTAAG	1 cut(s)	614
AflIII	ACRYGT	1 cut(s)	995
AgeI	ACCGGT	1 cut(s)	902
AjnI	CCWGG	5 cut(s)	4, 236, 1465, 1591, 1817
AjuI	GAANNNNNNNTTGG	6 cut(s)	1929, 1950, 1961, 1982, 1991, 2023
AloI	GAACNNNNNNTCC	2 cut(s)	1963, 1995
Alw21I	GWGCWC	1 cut(s)	221
Alw26I	GTCTC	3 cut(s)	986, 1337, 2060
AlwI	GGATC	3 cut(s)	259, 560, 573
ApeKI	GCWGC	4 cut(s)	187, 768, 1232, 1796
ApoI	RAATTY	2 cut(s)	916, 1929
ArsI	GACNNNNNNTTYG	2 cut(s)	968, 1000
AsiGI	ACCGGT	1 cut(s)	902
AspA2I	CCTAGG	1 cut(s)	434
AspLEI	GCGC	3 cut(s)	664, 810, 812
AspS9I	GGNCC	5 cut(s)	602, 1066, 1546, 1707, 1844
AsuC2I	CCSGG	1 cut(s)	655
AsuHPI	GGTGA	7 cut(s)	418, 656, 896, 1001, 1595, 1844, 2050
AsuNHI	GCTAGC	1 cut(s)	1490
AvaII	GGWCC	1 cut(s)	602
AvrII	CCTAGG	1 cut(s)	434
BalI	TGGCCA	2 cut(s)	840, 1218
BamHI	GGATCC	1 cut(s)	565
BanII	GRGCYC	1 cut(s)	221
BbsI	GAAGAC	1 cut(s)	1132
Bbv12I	GWGCWC	1 cut(s)	221
BbvCI	CCTCAGC	1 cut(s)	1011
BbvI	GCAGC	4 cut(s)	199, 780, 1244, 1783
BccI	CCATC	5 cut(s)	155, 241, 830, 1624, 1645
BceAI	ACGGC	1 cut(s)	1989
BcgI	CGANNNNNNTGC	2 cut(s)	1211, 1245
BciT130I	CCWGG	5 cut(s)	6, 238, 1467, 1593, 1819
BclI	TGATCA	1 cut(s)	223
BcnI	CCSGG	1 cut(s)	655
BcoDI	GTCTC	3 cut(s)	986, 1337, 2060
BfaI	CTAG	7 cut(s)	243, 435, 854, 1106, 1491, 1763, 2063
BfmI	CTRYAG	3 cut(s)	828, 1476, 1797
BfoI	RGCGCY	1 cut(s)	665
BfrI	CTTAAG	1 cut(s)	614
BfuAI	ACCTGC	2 cut(s)	929, 1899
BisI	GCNGC	5 cut(s)	188, 769, 1116, 1233, 1797
BlnI	CCTAGG	1 cut(s)	434
BlsI	GCNGC	5 cut(s)	189, 770, 1117, 1234, 1798
BmcAI	AGTACT	1 cut(s)	364
Bme1390I	CCNGG	6 cut(s)	6, 238, 655, 1467, 1593, 1819
Bme18I	GGWCC	1 cut(s)	602
BmgT120I	GGNCC	5 cut(s)	602, 1066, 1546, 1707, 1844
BmiI	GGNNCC	2 cut(s)	567, 604
BmrFI	CCNGG	6 cut(s)	6, 238, 655, 1467, 1593, 1819
BmrI	ACTGGG	1 cut(s)	714
BmsI	GCATC	6 cut(s)	402, 764, 1219, 1249, 1888, 1909
BmtI	GCTAGC	1 cut(s)	1494
BmuI	ACTGGG	1 cut(s)	714
BpiI	GAAGAC	1 cut(s)	1132
BplI	GAGNNNNNCTC	4 cut(s)	430, 462, 554, 586
Bpu10I	CCTNAGC	2 cut(s)	772, 1011
BpuEI	CTTGAG	5 cut(s)	686, 824, 1196, 1535, 1544
BpuMI	CCSGG	1 cut(s)	655
BsaBI	GATNNNNATC	1 cut(s)	1263
BsaJI	CCNNGG	5 cut(s)	237, 434, 653, 1272, 1591
BsaWI	WCCGGW	2 cut(s)	902, 1374
BsaXI	ACNNNNNCTCC	6 cut(s)	355, 385, 1406, 1436, 1652, 1682
Bsc4I	CCNNNNNNNGG	8 cut(s)	161, 456, 599, 986, 1278, 1466, 1704, 1737
Bse118I	RCCGGY	1 cut(s)	902
Bse1I	ACTGG	4 cut(s)	720, 778, 797, 1710
Bse3DI	GCAATG	4 cut(s)	763, 903, 1028, 1908
Bse8I	GATNNNNATC	1 cut(s)	1263
BseBI	CCWGG	5 cut(s)	6, 238, 1467, 1593, 1819
BseDI	CCNNGG	5 cut(s)	237, 434, 653, 1272, 1591
BseGI	GGATG	8 cut(s)	25, 166, 233, 546, 841, 1348, 1921, 1956
BseJI	GATNNNNATC	1 cut(s)	1263
BseLI	CCNNNNNNNGG	8 cut(s)	161, 456, 599, 986, 1278, 1466, 1704, 1737
BseMI	GCAATG	4 cut(s)	763, 903, 1028, 1908
BseMII	CTCAG	6 cut(s)	255, 509, 1002, 1038, 1640, 1677
BseNI	ACTGG	4 cut(s)	720, 778, 797, 1710
BsePI	GCGCGC	1 cut(s)	808
BseRI	GAGGAG	3 cut(s)	490, 1124, 2056
BseXI	GCAGC	4 cut(s)	199, 780, 1244, 1783
BsgI	GTGCAG	1 cut(s)	1793
Bsh1236I	CGCG	1 cut(s)	810
BshTI	ACCGGT	1 cut(s)	902
BsiHKAI	GWGCWC	1 cut(s)	221
BsiSI	CCGG	4 cut(s)	166, 655, 903, 1375
BslFI	GGGAC	2 cut(s)	636, 1149
BslI	CCNNNNNNNGG	8 cut(s)	161, 456, 599, 986, 1278, 1466, 1704, 1737
BsmAI	GTCTC	3 cut(s)	986, 1337, 2060
BsmFI	GGGAC	2 cut(s)	636, 1149
Bsp1286I	GDGCHC	1 cut(s)	221
Bsp1407I	TGTACA	1 cut(s)	704
Bsp143I	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
BspACI	CCGC	3 cut(s)	1115, 1494, 2002
BspCNI	CTCAG	6 cut(s)	256, 510, 1003, 1039, 1639, 1676
BspFNI	CGCG	1 cut(s)	810
BspLI	GGNNCC	2 cut(s)	567, 604
BspMAI	CTGCAG	2 cut(s)	1480, 1801
BspMI	ACCTGC	2 cut(s)	929, 1899
BspOI	GCTAGC	1 cut(s)	1494
BspPI	GGATC	3 cut(s)	259, 560, 573
BspTI	CTTAAG	1 cut(s)	614
BsrDI	GCAATG	4 cut(s)	763, 903, 1028, 1908
BsrFI	RCCGGY	1 cut(s)	902
BsrGI	TGTACA	1 cut(s)	704
BsrI	ACTGG	4 cut(s)	720, 778, 797, 1710
BssAI	RCCGGY	1 cut(s)	902
BssECI	CCNNGG	5 cut(s)	237, 434, 653, 1272, 1591
BssHII	GCGCGC	1 cut(s)	808
BssMI	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
BssNAI	GTATAC	1 cut(s)	66
BssT1I	CCWWGG	2 cut(s)	434, 1272
Bst1107I	GTATAC	1 cut(s)	66
Bst2UI	CCWGG	5 cut(s)	6, 238, 1467, 1593, 1819
Bst4CI	ACNGT	4 cut(s)	927, 1321, 1430, 2124
Bst6I	CTCTTC	2 cut(s)	1476, 1953
BstAFI	CTTAAG	1 cut(s)	614
BstAPI	GCANNNNNTGC	1 cut(s)	1298
BstAUI	TGTACA	1 cut(s)	704
BstC8I	GCNNGC	8 cut(s)	621, 810, 875, 1195, 1492, 1545, 1888, 2032
BstDEI	CTNAG	9 cut(s)	264, 423, 518, 772, 1011, 1047, 1626, 1663, 1828
BstF5I	GGATG	8 cut(s)	25, 166, 233, 546, 841, 1348, 1921, 1956
BstFNI	CGCG	1 cut(s)	810
BstH2I	RGCGCY	1 cut(s)	665
BstHHI	GCGC	3 cut(s)	664, 810, 812
BstKTI	GATC	6 cut(s)	226, 254, 568, 598, 1387, 2060
BstMAI	GTCTC	3 cut(s)	986, 1337, 2060
BstMBI	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
BstMWI	GCNNNNNNNGC	5 cut(s)	680, 774, 863, 1268, 1298
BstNI	CCWGG	5 cut(s)	6, 238, 1467, 1593, 1819
BstNSI	RCATGY	4 cut(s)	749, 877, 999, 1201
BstSCI	CCNGG	6 cut(s)	4, 236, 653, 1465, 1591, 1817
BstSFI	CTRYAG	3 cut(s)	828, 1476, 1797
BstUI	CGCG	1 cut(s)	810
BstV1I	GCAGC	4 cut(s)	199, 780, 1244, 1783
BstV2I	GAAGAC	1 cut(s)	1132
BstX2I	RGATCY	1 cut(s)	565
BstYI	RGATCY	1 cut(s)	565
BstZ17I	GTATAC	1 cut(s)	66
BtsCI	GGATG	8 cut(s)	25, 166, 233, 546, 841, 1348, 1921, 1956
BtsI	GCAGTG	4 cut(s)	690, 1473, 1781, 2079
BtsIMutI	CAGTG	7 cut(s)	504, 690, 1313, 1473, 1717, 1781, 2079
BveI	ACCTGC	2 cut(s)	929, 1899
Cac8I	GCNNGC	8 cut(s)	621, 810, 875, 1195, 1492, 1545, 1888, 2032
CfoI	GCGC	3 cut(s)	664, 810, 812
Cfr10I	RCCGGY	1 cut(s)	902
Cfr13I	GGNCC	5 cut(s)	602, 1066, 1546, 1707, 1844
Csp6I	GTAC	5 cut(s)	363, 705, 781, 1605, 2120
CspAI	ACCGGT	1 cut(s)	902
CviQI	GTAC	5 cut(s)	363, 705, 781, 1605, 2120
DdeI	CTNAG	9 cut(s)	264, 423, 518, 772, 1011, 1047, 1626, 1663, 1828
DpnI	GATC	6 cut(s)	225, 253, 567, 597, 1386, 2059
DpnII	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
EaeI	YGGCCR	4 cut(s)	163, 838, 1216, 1989
Eam1104I	CTCTTC	2 cut(s)	1476, 1953
EarI	CTCTTC	2 cut(s)	1476, 1953
Ecl136II	GAGCTC	1 cut(s)	219
Eco130I	CCWWGG	2 cut(s)	434, 1272
Eco147I	AGGCCT	1 cut(s)	460
Eco24I	GRGCYC	1 cut(s)	221
Eco47I	GGWCC	1 cut(s)	602
Eco53kI	GAGCTC	1 cut(s)	219
Eco57I	CTGAAG	1 cut(s)	533
EcoICRI	GAGCTC	1 cut(s)	219
EcoO109I	RGGNCCY	1 cut(s)	1546
EcoRI	GAATTC	1 cut(s)	916
EcoRII	CCWGG	5 cut(s)	4, 236, 1465, 1591, 1817
EcoT14I	CCWWGG	2 cut(s)	434, 1272
EcoT38I	GRGCYC	1 cut(s)	221
ErhI	CCWWGG	2 cut(s)	434, 1272
FalI	AAGNNNNNCTT	4 cut(s)	514, 546, 1950, 1982
FaqI	GGGAC	2 cut(s)	636, 1149
FauNDI	CATATG	1 cut(s)	1894
FbaI	TGATCA	1 cut(s)	223
FblI	GTMKAC	1 cut(s)	65
Fnu4HI	GCNGC	5 cut(s)	188, 769, 1116, 1233, 1797
FokI	GGATG	8 cut(s)	32, 173, 220, 553, 848, 1335, 1928, 1963
FriOI	GRGCYC	1 cut(s)	221
Fsp4HI	GCNGC	5 cut(s)	188, 769, 1116, 1233, 1797
FspBI	CTAG	7 cut(s)	243, 435, 854, 1106, 1491, 1763, 2063
GlaI	GCGC	3 cut(s)	663, 809, 811
GluI	GCNGC	5 cut(s)	188, 769, 1116, 1233, 1797
HaeII	RGCGCY	1 cut(s)	665
HapII	CCGG	4 cut(s)	166, 655, 903, 1375
HhaI	GCGC	3 cut(s)	664, 810, 812
Hin6I	GCGC	3 cut(s)	662, 808, 810
HinP1I	GCGC	3 cut(s)	662, 808, 810
HincII	GTYRAC	1 cut(s)	1598
HindII	GTYRAC	1 cut(s)	1598
HindIII	AAGCTT	2 cut(s)	545, 1964
HpaII	CCGG	4 cut(s)	166, 655, 903, 1375
HphI	GGTGA	7 cut(s)	418, 656, 896, 1001, 1595, 1844, 2050
Hpy166II	GTNNAC	2 cut(s)	66, 1598
Hpy188I	TCNGA	9 cut(s)	105, 223, 283, 456, 552, 909, 1629, 1666, 1749
Hpy188III	TCNNGA	9 cut(s)	314, 374, 803, 1175, 1306, 1561, 1684, 1982, 2075
Hpy8I	GTNNAC	2 cut(s)	66, 1598
Hpy99I	CGWCG	1 cut(s)	681
HpyAV	CCTTC	7 cut(s)	17, 74, 616, 652, 1558, 1690, 1828
HpyCH4III	ACNGT	4 cut(s)	927, 1321, 1430, 2124
HpyF10VI	GCNNNNNNNGC	5 cut(s)	680, 774, 863, 1268, 1298
HpyF3I	CTNAG	9 cut(s)	264, 423, 518, 772, 1011, 1047, 1626, 1663, 1828
HspAI	GCGC	3 cut(s)	662, 808, 810
Ksp22I	TGATCA	1 cut(s)	223
Kzo9I	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
LmnI	GCTCC	4 cut(s)	260, 438, 1540, 2043
Lsp1109I	GCAGC	4 cut(s)	199, 780, 1244, 1783
LweI	GCATC	6 cut(s)	402, 764, 1219, 1249, 1888, 1909
MaeI	CTAG	7 cut(s)	243, 435, 854, 1106, 1491, 1763, 2063
MaeIII	GTNAC	5 cut(s)	137, 884, 1145, 1554, 2105
MalI	GATC	6 cut(s)	225, 253, 567, 597, 1386, 2059
MboI	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
MboII	GAAGA	8 cut(s)	421, 520, 1137, 1493, 1585, 1823, 1970, 2112
MfeI	CAATTG	3 cut(s)	878, 1239, 1608
MflI	RGATCY	1 cut(s)	565
MhlI	GDGCHC	1 cut(s)	221
MlsI	TGGCCA	2 cut(s)	840, 1218
MluNI	TGGCCA	2 cut(s)	840, 1218
MlyI	GAGTC	9 cut(s)	127, 134, 275, 487, 567, 1122, 1142, 1424, 1661
MmeI	TCCRAC	1 cut(s)	1893
Mox20I	TGGCCA	2 cut(s)	840, 1218
MscI	TGGCCA	2 cut(s)	840, 1218
MseI	TTAA	3 cut(s)	615, 1326, 1410
MslI	CAYNNNNRTG	3 cut(s)	149, 315, 1202
Msp20I	TGGCCA	2 cut(s)	840, 1218
MspA1I	CMGCKG	1 cut(s)	190
MspCI	CTTAAG	1 cut(s)	614
MspI	CCGG	4 cut(s)	166, 655, 903, 1375
MspR9I	CCNGG	6 cut(s)	6, 238, 655, 1467, 1593, 1819
MunI	CAATTG	3 cut(s)	878, 1239, 1608
MvaI	CCWGG	5 cut(s)	6, 238, 1467, 1593, 1819
MvnI	CGCG	1 cut(s)	810
MwoI	GCNNNNNNNGC	5 cut(s)	680, 774, 863, 1268, 1298
NciI	CCSGG	1 cut(s)	655
NdeI	CATATG	1 cut(s)	1894
NdeII	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
NheI	GCTAGC	1 cut(s)	1490
NlaIV	GGNNCC	2 cut(s)	567, 604
NmuCI	GTSAC	4 cut(s)	137, 884, 1145, 2105
NspI	RCATGY	4 cut(s)	749, 877, 999, 1201
PaeI	GCATGC	1 cut(s)	877
PauI	GCGCGC	1 cut(s)	808
PceI	AGGCCT	1 cut(s)	460
PciI	ACATGT	1 cut(s)	995
PfeI	GAWTC	5 cut(s)	278, 289, 1166, 1470, 1586
PflMI	CCANNNNNTGG	1 cut(s)	1466
PfoI	TCCNGGA	1 cut(s)	1465
PinAI	ACCGGT	1 cut(s)	902
PkrI	GCNGC	5 cut(s)	189, 770, 1117, 1234, 1798
PleI	GAGTC	9 cut(s)	126, 134, 274, 486, 566, 1122, 1142, 1423, 1661
PpsI	GAGTC	9 cut(s)	126, 134, 274, 486, 566, 1122, 1142, 1423, 1661
PscI	ACATGT	1 cut(s)	995
Psp124BI	GAGCTC	1 cut(s)	221
Psp6I	CCWGG	5 cut(s)	4, 236, 1465, 1591, 1817
PspGI	CCWGG	5 cut(s)	4, 236, 1465, 1591, 1817
PspN4I	GGNNCC	2 cut(s)	567, 604
PspPI	GGNCC	5 cut(s)	602, 1066, 1546, 1707, 1844
PstI	CTGCAG	2 cut(s)	1480, 1801
PsuI	RGATCY	1 cut(s)	565
PteI	GCGCGC	1 cut(s)	808
PvuII	CAGCTG	1 cut(s)	190
RsaI	GTAC	5 cut(s)	364, 706, 782, 1606, 2121
RsaNI	GTAC	5 cut(s)	363, 705, 781, 1605, 2120
RseI	CAYNNNNRTG	3 cut(s)	149, 315, 1202
SacI	GAGCTC	1 cut(s)	221
SaqAI	TTAA	3 cut(s)	615, 1326, 1410
SatI	GCNGC	5 cut(s)	188, 769, 1116, 1233, 1797
Sau3AI	GATC	6 cut(s)	223, 251, 565, 595, 1384, 2057
Sau96I	GGNCC	5 cut(s)	602, 1066, 1546, 1707, 1844
ScaI	AGTACT	1 cut(s)	364
SchI	GAGTC	9 cut(s)	127, 134, 275, 487, 567, 1122, 1142, 1424, 1661
ScrFI	CCNGG	6 cut(s)	6, 238, 655, 1467, 1593, 1819
SduI	GDGCHC	1 cut(s)	221
SfaNI	GCATC	6 cut(s)	402, 764, 1219, 1249, 1888, 1909
SfcI	CTRYAG	3 cut(s)	828, 1476, 1797
SinI	GGWCC	1 cut(s)	602
SmiMI	CAYNNNNRTG	3 cut(s)	149, 315, 1202
SmlI	CTYRAG	6 cut(s)	614, 665, 803, 1175, 1550, 1559
SmoI	CTYRAG	6 cut(s)	614, 665, 803, 1175, 1550, 1559
SphI	GCATGC	1 cut(s)	877
SseBI	AGGCCT	1 cut(s)	460
SsiI	CCGC	3 cut(s)	1115, 1494, 2002
SspMI	CTAG	7 cut(s)	243, 435, 854, 1106, 1491, 1763, 2063
SstI	GAGCTC	1 cut(s)	221
StuI	AGGCCT	1 cut(s)	460
StyD4I	CCNGG	6 cut(s)	4, 236, 653, 1465, 1591, 1817
StyI	CCWWGG	2 cut(s)	434, 1272
TaaI	ACNGT	4 cut(s)	927, 1321, 1430, 2124
TaqI	TCGA	8 cut(s)	179, 269, 313, 506, 561, 982, 1000, 2076
TatI	WGTACW	4 cut(s)	362, 704, 780, 1604
TauI	GCSGC	1 cut(s)	1118
TfiI	GAWTC	5 cut(s)	278, 289, 1166, 1470, 1586
Tru1I	TTAA	3 cut(s)	615, 1326, 1410
Tru9I	TTAA	3 cut(s)	615, 1326, 1410
TscAI	CASTG	7 cut(s)	504, 690, 1320, 1480, 1717, 1781, 2086
TseFI	GTSAC	4 cut(s)	137, 884, 1145, 2105
TseI	GCWGC	4 cut(s)	187, 768, 1232, 1796
Tsp45I	GTSAC	4 cut(s)	137, 884, 1145, 2105
TspDTI	ATGAA	5 cut(s)	36, 299, 557, 1179, 1544
TspRI	CASTG	7 cut(s)	504, 690, 1320, 1480, 1717, 1781, 2086
Van91I	CCANNNNNTGG	1 cut(s)	1466
Vha464I	CTTAAG	1 cut(s)	614
VpaK11BI	GGWCC	1 cut(s)	602
XapI	RAATTY	2 cut(s)	916, 1929
XceI	RCATGY	4 cut(s)	749, 877, 999, 1201
XcmI	CCANNNNNNNNNTGG	3 cut(s)	727, 1085, 1930
XmaJI	CCTAGG	1 cut(s)	434
XmiI	GTMKAC	1 cut(s)	65
XspI	CTAG	7 cut(s)	243, 435, 854, 1106, 1491, 1763, 2063
ZrmI	AGTACT	1 cut(s)	364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.